Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AE001016

[Submit comment/correction]

Sequence	AE001016
Germplasm	BYU132 (oat)
Species	Avena erithiana
Probe	AE001016
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AAGCACCTACAAGCTAGTATACAGCTTTCCTCATCTCTTTATTGAAGAAA GGAACAACTCGTCCCTTTTTTGACACACTTACACAGTAGCATATTAAACA CAAACGAACATACATAGCCAACTGTGTACTCCATTCGAGCCCAAATGAAA AGGAAAAAAGAACCATAGGCAAACTCGACGCAACCTCTCTGGCCATCCAT GCATGTATAAATGCACGTGTATACACAGCCAGACACAGCCAAATCAGAAA TTCAGAATCAAACCATATCAGTGCACGCACACAGCACAATATACCAATCC ATGCACATTCCCAGCAAACCCGTCACCATGACCAAGGCGCGTCAGTGTCC GCCATCGCATCCGCCTCCTCCGACACCTCCGGGGCGGTCTCCTCCGGGTG CTGGGTTGCAACAGCCGGATCCGGAGTCACCGCCCCGCGACCAAAAGGTT TTCTTATCGCCCACACCGCGAGCGGTGCCAGCTGTCCCGGAAGCAGCAGG AAGCGTCGCCGTTACCACACCGGCAGTACCCGCTGGTTCGTCCCTTGCCG CTTCCACTGCATGCGATAGTGCGAGACAGAGCAGGAGGGCAGCAACGCCA AAGCAGCTCCACTTAGCCATGGCTATACCTAGCTTGCTTCTTGCTCGCGT GTTTTGCTGGCTTGTGCTGCGTGCAGTGTAGCCTGTGCTGCGTGCGGTGA TTGTGTTGCGATGGTGGAGAGGTCAGGGTGGAGTCTCACGGTTTAAATAA AGCAGCGAAGAGCCAGTGTAGTAAGTGACACCGGCGGGAGGGGTGGTGTG AGCTGTGAACATAATAGGAGTATATATGAAGTAAGAGTGGTGGTGTGAGC TGTGAACATATATTTCGCAGGGGACACGTCACGTGGCATCCAGCTCATCC TATTCGAGCTAAAACCCCTAAATATCTAGCGCCTGCGTGCAGCTAGAGTA TATATGAATGTGATGGGACTGGATAGCTTTTGATCATATTGTGTGTGGGT TAATCGCCAACGAAGAGTTGTTGTACTGTACATGCAGTCGTGCAATGTTC CACATCAGTACATGCCATGCTATCTCGAAATCTCTGAGGCCAGTCTGTCA ATAGTGAAGCTGGATTGGGCGTGTGCTTGTCTAGCCAAGGTCATCCTGGT GCTGTGATACGTGTATATTTTTGGGGATTATTGATATCAGAAACAATTAG TGTTTTTGTTGATGCTTAGTAACCATCACGGTGGAAAGCCAAGAGGAACT CACATTTATTCTGATAAAAGTTAATATTTAGTAGGTTGATAAGACAATTC CCGATGTCCTTTAGTGGTTGTTGCAAACAAATAGGAGTGTCGGTACAAAA GTAAAAGGAGCAAAAATTAATCCCTTAGCTTTTTTTCTTTTAGGGAAACC CAACATGGATGTATTGGCGAGGACAGTCATGACAATTTAGTTCTGCCAAG AACTTGATTGTAGAGCAAAAATGAGTGAACAAGAAATTTGGAATGGGTCA TGATAGGTTGAAGCACTTACTTTGATCATCCAACTGCTAAAATCCCCGTT TAGCCATGAACATTATAAACATGGACAATTGCTTTGGATTGTCAAATTTT GGCTATTCATACTTTGGTATGCTCAACCATTTGTACAAAAAGTCCAGGCT TTCAAACTTAACATAAACACAAAATATTTTTATCTAGACTCCTCACCAAA CCAATCCCTTGCGAAGGAAGCTTCAATGCATGCATGTGTATATGTATAGA AAGACACATCGTGTGTTTGACATGCTTATATGCAATAGACATGCTTATAT GCAATTATCTTGCGATGTACGCGCATGGAAACGATGAACTACTAAGGTGT CGTGGATACTAGATAGAAATAATGAGATCACCACATTAAGGACAATTTCG GGGACAAAATATGTTTTGTAGCTCAAACCGTTTTCCTGCTCTACGGTGTG TTTTCGCAGGACTTCGTATCGGCTAGATCTTCAAAACTAGATCAGGTACG AATATATATTTCAACAAACTTTTTTGGCATTGTTTTATTACTAGCCAGTA ATGCATAAGCTGCAACCCTTATATTAACACAACCACATGGTAAATTCAGT ACATATGCCTTACATCTTCATTAGTTGGCGGATGGAAACTTTAGACGTTG AAATAATACTCATCGAAAAGTGCCAACATAGAGTTTAGTTTGGATGATCT TGTCGAGAGAAAGTAGATAGTGAAGATTGGTCATCAATAAATTTTGCAAT TTAGGAGATAAAACATTTCAAAGATTTAATTTTGCAAAAATGTTTCATGG CATCTATTTATTTATTCATGCATGCACGGCACCACCAATTTTCGCCAACA CTGTGAGTACTATGTAACATCCAGAATAATAGGAAGGGAGAAAAGGGTCA ATGTTTAATTTTTGGATTTGCCTCTCATACACATGAAAATGAGGGGGAAA TTAAACTTCTTGATGCTTTGAGTGTTAGAAATTGAAAGTTGACACAAGTG TTGAGTTTTAATCGAATCAACACTAGGATTTAAAGTTTAGATTTCAATTG TGGTTTGATTGTGAGTCAACAAAGTGAAAATAATTCAATCTTAATGACTT GATCATTTATACACACAAACTATAATGTACAAGCAAGTGATATTTAGAAC AAATTTGTAACATTTGAATTCAAAATGAAGGTGTGAATTAGTCAAACTTG ACATCAAGTATATAAGAAGTACACAAACTTTAGAGGAATGCATAAAAGTA CAAATGAAGACAAGTTAATACTCAAATAAGATTTTTATTCATTTCAATAT GGTTACAAAGTTGAGTATTACAAAAGTTAAAAAAATACAAAAAATAAGAA AAACCTAGAAACTAAAACCTAGCATTATCTCGGTCTTCTCATATCCTCTC TATTCCACTCATCTTCGACTCTTGATTCTTGGTGAACCTGCAAACATCTA AATATTAGAAAAGACTATGTCCATGATTAAAATGTAGGGTGAAACCTATC GATTTGGAAATCCAATAAGAATATTAGGAACTAGTCCTGAGATTCTTGGG CCTGGGGAGATTAGGCAAATAGTAACCAACAAAAATGTGAATAAAACCAA TAGGAAAATTGTACTAATGGTTAGGGTTACCAACAGCAGTACCACAGAAG AGTAGTAACAATTACCAGAGATCTCTATGACAAAACTGGTAAGCGCAAAT TACAGTAGAACCAAACACCAACAACCATAGATAGTAACTATAGGAGATAG TGAGCAGGTGCATAGGCAGTTTATGTATCACAGATACACAAGAACAACAC TACCAGATTCTAGGTTGACAGCAACACAAGTCCAAATAGCAGTTCAATAT AGTAGTAACTAGACCTATAGTAACAACTGATAGCAATATAGTGGAAGTAT GCATATGAGAAAAACCTAGAGGAACTGAACACATATCAACCAAGACCAGT AGTAAACATAGTACAGTAAATATCAAGTATTAGTTCACTTGAATCAAACC AATAGCTAGACCAAGTAATCCAATCAGGAATCTACTTAGGGAAACAATAG ATCTTTGAGAGTATTACAAATCAAAAAATACCCAAGCCATGGATTCCTTA TAAAAATAACAAATTCTTGAAGGATGAACACTAAGCAGTTCATCACTCCA ATTCAAAAATCAAACTGAACCAAGAACTAAGAAATCTAAGTAATAAAAAT AAATCTTAATAAATATAAAAGCCACATGTCTCTGTCCAAGATTGCGATAG GACAAATGTCAACTGGAAGCACATATGAGTTCTCCCTCTGTGCATGCCAG CTATGTGGAAATGGACTCTGAGGTCAGGTTATCAATGGGGAAGGTCGAAT GACGTTTGTTATAGGGTGTTCATTGTGATGGAATAGGCCAAATTTTAACT GTCGCCAATGAAGAGTTGTTGCACCGTGTGTGACCAGCCATGCATGTGCA AATGGACTGTGAGGTCAGTCTGTCATCAATGGTGAACAACACGATTGACA TGTGCTTGTCTAACCACGATCTCAAGGATAAAACTAATTAATCCTCCCCC GAGAACCGGAGAGAGACTGATATGTAAATTTTGAACAAACACCATCGTAG CCAGAGAGCCTGAAACGGGAAACTGGATCCTATTCCCTTTGTGCGTGTTT AGTGTGGGGAATATTGGCATCAGAAATAATTAGCTTTTTATTGAGGATAA GTAACCATAATTTATCATGGTACAAACTTTGTAATAATCTAATATTTATC GATACCAAAGCGGAGAGGGTGGAAGAGTACATTTTAATATTATCATATGA AAATCCTCCACGTCTTGTATTCGCTGTTGCATCCAGTAATGAGTGTCGGT AGAAAAACAAAAGGAGATAAAATCGATCCCTTAATTTGTTTATCCAGCTT ATTTTCGAGAGAAACCGATCACGGATATGTTGGCGAGGATGGTCATGAAA ATTCGGTTTTCCCAGGAACTTAATTTGGAGATGACAAACGTGTGAAACAA GGAACGACCATCATAGGCTGAAGCACTTACTTTGATCATTCATCTAAAAT GCTCATTAAGCGATGGACATTATAAACATGGTCAGACTCACGCATAGTAA AATTCTTGCTACTTATTTTCATTTTTTCTTTTAGACTTTGGTATGTCCAG CGAGTTGTAACAAAATATAGTGTATTGTGTAACATCCTTCACACATGTCT CTGGCACTTCAAATTTCACGTATACACTAAAATTTAATCAGGTCTAGACA CCAAACCAATCACATGGGACCCAAGTTTTTATGCATCTATGTGTATATAA ACACACATGGTGTGTCAAAGCTAGAGCATTTTTGAATGTGCTTCCCCGTT GAAAATCATATGGCAGAGGTCGGTGGCAAGTGTGTTTGATATACAAGATT GGGAGGCAGCAGAAATCGATTGTATCCTTTAATCCACACTATGTCATGTA GGGACAGCGTTATCCCTACAATATCTTCCAGTGCCGGGTGAACTATGATA ATACTCACATATATAAAGTTCAGGGCCTCCTCTGGTGTCCCCTGATAATG CTCTCTGGCTACTATAATACAGAACAGGGACACCACAGGGGTCAATGGAC ACGCGGCGGTGTGAGCCCTGCCACGTGGTTGGCCATGGTCTCGAACGTGG CTTGACAATCCTGCTCTGGCACCGCGTGTTGCTCGGAGCCTGCCTGGTGC AGACTGGTGCCAGGATGCGCATCATCAGTCAGGTCCTTGTCCTGGGCAGC TGCACGGGGTTGATCTGCTGCCGGGGGTGCTGTCAGGATCCCGCGAGGAG TCTTTCCCGAGTCCCCGTGCGGGCATCGATCCCGGGTCACACACCGCCCA CGGGTCCCGGGACAACCTGATTCCGGCGGACGCGACAATTCTGGATGAAA AACAGGTGAAACAAGAAATTTTGGAATATTGGACCATGGTAGGATGAAGC ACTTATTTTGGTCATCAAACTACTAAAATGCATGTTAGCCATGAACATTA TAATATAAACATGGCTAGCCCTTCCATAGTACAATTTTTACTACTTTTTT TTTGCGTTTAGACTTTGATATGTTTAGGACACCTCCTTCTGGGCTTCTGA TCCGGCTTCTAGGTCCCAAACCGCTAAAGCCCAAACTTCTTCTAGGTAGT TTTTTTCCCACCATTGTTTAGGTTTATTGCAAAATCAAAGCAATATACCG TAATACCCCTATTTATCATGTTTTTAATTCTTCTCCAGACCAACTTGTTG CTCCTCCGCCTATTAGTGGCGTGCTAAAAAGATTATCAGTGGCGTGGGGC GGCACTCCACTAATATGGCACCACTGGAAAATTCTTAAATGACACGAATA TGTCCAGCTCAAGGATACATAATAGGACAGCTGATCGGTCCTCTTGGCCA GATGCTCCGAAGTGGATTGGTTTAGTGGGTGATCAAGTGAAGATATATGT CGAGATGCCGCTGCTGCTCGTTCTGAAAGCCATGCGCATAGAGCTGTAGC GACAACCTGTGGGAGTGCAGATGGACTTTTTATAGGAGCTTCGGTCCTCA CTTTCCATGGTATCCCACAACCTGCAATGCTGGAAGCAATTGCATGCCTT GAAGCCCTGGCGTGGGTGTCTGTTCTCCAAGTCACCAATTGTGTAATCAC GTGCCTAGTTATAGAACCGTGCTTCAGGAAATAAAACAGTGTATTATAGA TTTTTTGGGTTTTAGCTTTTTTTTGTGGGTGTTAGCTTCGTACATGAAAA TACAACATCATGATCTAGCTTGTATTTCTCACGATTTGTATAGGGACGTC ACATGTGGCTCCTGAACTCATTGTACCTCTTACGATTGAGCATAAAGAGA GCTACGAATATGATCCTACAAAATTCTCTCGCTGCTGATCAGTCTGTTCT TTTTTTCTTATTGCTCGAGAAAATCTTCTATGGACGTCGCTTAACCTTAA CCATAGACAAGCATCTACAAAGCCTGTATACATCTTTGCACGTCTCTTTT TATTGAAAAATAATAATAATTCGCCTCTTTTTTGACACACTTACATGAGC ATATTAAACATAGGCAAACTCGACGTAACCTCTGTAGAACAAAGCCATGC ATCTTTCCAGTAGTCGTCGGCACGTGCATGCCCAACAAAAACCATCACCA TCACCAAGGCACGTCAGTGTCCACCATCGCATCCGTCTCGTCTGGGTTCG GGGTTGCAACAGCCGGATCCAGAGCCTCCTACGATGACGCCAGCATTTTG CACCTCCACCAGTACAAATTAGCCTATTAGTTGCGTGGGGGCGCCACTTC ATTTATATGGCACCACTGGAAAATTCTAAGACATATGCCGATGTTGCTCG TTATGAAAGCCGTGGAGGTGTAGCGGCAATCTATCAAAGTGCAGATGGAA TTTATATAGGAGCTTTGCTCCTTGCTTACATTGGTATCTCAGAGCCTGCA ATGCCGGAAGAAATTGCTTGCCTTGGAGCCCTGGCGTGGGCGACTGATCT CCATGTTACCAATTGTGTTATGGTCTGCAAGGAAATAATGGCAGCTCTAA AAAATAATCACATGCCTAGTTATAGCACCGTGCTTCGGGAAATAAAACAG CGTATTGTAGATTTTGTGGATGTTAGCTTTGTACATGAAAATACTGCATC TAATGTAAGTCTCGTGATCAAGCTTATAGTTCTCTCGATTTGTGTAGGGG CGCCGCCTGCACAAAAAATCTCTCGCCATTCGTCTTATCAGTTTGTTTTT ATTTTGTTATTACTTTAGAACATCGTGCACATTGCCTAATATGATAAGTG ATAACCATAGACAAGCACCTACAACCTAGTAGTATACAACTTTACTCATC TCTTCAATGGAAAAAGGACAACAACTGGTCCCTTTTTTGACAGACTTAAA CAATAGCATATTAAACACAACCGAACATACATAACGTACCCCAATCGAGC CCAAATGAAAATAAGAATAAAAAACGTAAGCAAACTCGACGCAACCTGTC TCGTTGTCCAGCCATCCATGGATGCATATATGCACGTGTATACACAGCCA ACAAACCCAAATCAAAAGTTGAGAACCAAACCATATCACTGCACACACAA TACTAATCCATACATCTTTCGAACCGTCGGCACATGCATATATATACCTG CATGCCCAACAAACCTGTCACCATGACCAAGGCGCGGCAATGTCCGCCAT CGTATCCACCTCCTCCGACGCCTCCGGGGTGGTCTCCTCCGGCTCCAACT CCGGGATTGCAACACCCGGATCCCGAGTCGCCACCCCACGACCAAAAGTT TTTATATGTTGCCTTCATATACTGATAATATGCATTTGTGTACTCTTGTT TTCCATAGTTCGTTTAAATATAAAACCACAATGCATCGAAATAAAGTTAG AATTCGATATTCCTTGTTTTGTGCCTTGTGTGTGCTCTTCCATTTATCTT TCTTATTATTTTGATTGGAATGAGTACACCTTGGGACCCTGGTATTTCTT TATCAAGCATTCTTTATAAAAAGGACGGTCCAAACAAAAAAAACATTGCT TTCATTATATGTTCCCCACCTAAAAGAAACAAAGGTATGAAGCATAGCTA TATGGCTATAAAAAAGCGCTTTAGGGGAGGAAACTCGGTTGTTTTTGTTT TTATTTTGGTTTTGCTTTATGTTTTTGTTGTAGAAAGAGAGACTTTCTTT TTGTTTAGCTACGGGAGTATTTAACAAAGTATAAAGTTTTACTCATTTTG GATGTTAAGTTTACACAATATGTGTGAGTTGTAGATTCATTCATGTTGTT GTTTACAGAAAAAATTCCCCACGTCATTTGGTAGCCCCGTTTGGGATCAA TTTTCTATAGTAGTTACAACCTTTTATCCTATTTCTGCACAAAATTTGGC AAAACTCATGACACTCGACATGCTCGAAACAATTATATTTTCGAGTAGTT TTTTCTGGATAGATTCTGTCTTTTGATGCAAGAGCACCTTCTTTGATTCT TTTTAGGTCCTTTGAAATATTTTGGATGTTGCACACCTAAGCAACTCTCC GTACATTTGGAATTTCAATTTATTTGAGGTTTGTATAGAAGTTTGGAAAT TATCTTTATGTCACTAATGTCACCTCGCAGAAAACGAATGAGAGAATTCT GTGTTGAATTGTTTTTTACAGGAAATGGATAAACATTATAACATGATAAA TCCAAGAATGGTGTAAACCGTAATATTTGGGATGGCCAAGGCACCCCACT AGACCTATTACACACACGGATTGCAAACCTCTAAACTTTGTATTTCGAGC AACGTAAGACTATCGCAAAAACTTGAAGCATTTGTATCTAGATTTAGTTT ATAAATTTTGTTTACCCATTTTGGATCTAAATAAAATACCACCACCTATA GATGTGCCTATATATCGTTAATCTACTGTAATTATACTAAGTTCCAATTA AAGGTCATTAAAGAAAGATGAAGGGATAAATAATAATTACATGAAAAGAA CTCATGACTACTGTTTAGGTTTAATTATAGTGCAAAATCGACGGGCTGGA GAAGCAAACAAAGAGCATCTCCCCTAGCTCCAGTACTGAAAATCAAAGAG ATATACAAGAATTCCCCTATTTTCATGTTCATTATGACCAAGATGCAACC GCCACAACCAAATTTTTCCTTCTTATTTTGGTCTAGCGTGCACTTCTCTA CACCCACCATATTGCTCCTCCATCAGTAGAAATTACCATATTAGTTGCGT GGGGGCGCCACTTCACAAATATGGCGCCACTGGAAAATTCTTAGACATAT GCCACTGTAGCTCGGTCTGAAAGCCGTGGAGTGTAGTGACAATCTATCGG AGTGCAAATTGAATGTCTATAGGAGATTTGGTCCTTGCTCAGCATGGTAT CTCAGAGCCTGCAATGCTGGAAGAAATTGCTTGCCTTGGAGCCCTAGCGT GGGCGACTGATCTCCAAGGTACCAATTGTGTTATCATCTCGGACTGCAAG GAAATAATCGCACCTCTAAAAAAGAATCACATGCCTAGTTAGTTATAGCA CCGTCGTGCTTTAGGAAATCAAACAACATCTTGTAGATTTTGGATGTTAG CTTCGTACATGAAAATACTGCATCTGATCAAGATTGTAGTTCTCTAGATT TGAGTAGGGACGGCGCCTGCGACTCATGAACTCACCTGATACCAGAATTG TACCCCTTTACGATTGAGCAATAAAAAGAGCTATGATCCCTAAAAATATC TCTCGCCTTTCGTTTTATCTGTGTGTTTTTCTTTTGGTTATTGCTCGAGA ACAAGTGCACATTGCCTAACCTGATAAGTGATAACCATAGACAAGCACCT ACAAGCTAGTATACAGCTTTCCTCATCTCTTTATTGAAGAAAGGAACAAC TCGTCCCTTTTTTGACACACTTACACAGTAGCATATTAAACACAAACGAA CATACATAGCCAACTGTGTACTCCATTCGAGCCCAAATGAAAAGGAAAAA AGAACCATAGGCAAACTCGACGCAACCTCTCTGGCCATCCATGCATGTAT AAATGCACGTGTATACACAGCCAGACACAGCCAAATCAGAAATTCAGAAT CAAACCATATCAGTGCACGCACACAGCACAATATACCAATCCATGCACAT TCCCAGCAAACCCGTCACCATGACCAAGGCGCGTCAGTGTCCGCCATCGC ATCCGCCTCCTCCGACACCTCCGGGGCGGTCTCCTCCGGGTGCTGGGTTG CAACAGCCGGATCCGGAGTCACCGCCCCGCGACCAAAAGGTTTTCTTATC GCCCACACCGCGAGCGGTGCCAGCTGTCCCGGAAGCAGCAGGAAGCGTCG CCGTTACCACACCGGCAGTACCCGCTGGTTCGTCCCTTGCCGCTTCCACT GCATGCGATAGTGCGAGACAGAGCAGGAGGGCAGCAACGCCAAAGCAGCT CCACTTAGCCATGGCTATACCTAGCTTGCTTCTTGCTCGCGTGTTTTGCT GGCTTGTGCTGCGTGCAGTGTAGCCTGTGCTGCGTGCGGTGATTGTGTTG CGATGGTGGAGAGGTCAGGGTGGAGTCTCACGGTTTAAATAAAGCAGCGA AGAGCCAGTGTAGTAAGTGACACCGGCGGGAGGGGTGGTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.