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GrainGenes Sequence Report: AE027827

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Sequence
AE027827
Germplasm
BYU132 (oat)
Species
Avena erithiana
Probe
AE027827
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CGCAAAGCGAGAGGGAGAGAGGGAGATGATGTTGCGCATGCTCCTCCACG
ACGCGGCGCTCTTGCTGCTGCTTCTTGCGGCGGTTGCGCATGCTCAACAG
ACGGCGAATACCCATCCGGGCGACGGTGAGCATGCTCCACTTCGTCCTCC
CTAAATCTTTCTACTCCCTCCCACCCAAATTAGTTAAATTGCACACCAAA
TCAACTAATTTAGGTCGGAGAGTACATCCATTTCAAAATAAAGGTCTTAG
CTTTGTCTAAATTCATTTCAAAATAAGTGCCTCAACTTTGTCTAGATATC
TATGAATCTAGACAAAGACGAGACACTTATTTTAAAACGGATGTACGTAC
AAGTAAGTGTTATTAGGTTTTCCGCTTTCTCCATTCCTAAATCAATCGCC
TCCATGCTGGAGTCATGAATGGCCCACCTGATGATCTTCCAAATCACCAA
CCATGTTCTTTCAAAAAAAAAAACACCAACCCTGCTACATTCGCCAAGAC
TATCCAACCTCTCGATGTGGACGACTGGCTTTGAATAGATGACGAAAAAG
AAAAGGTTCTGTTTGCCACCCACTATCTCACATGCCAAACTAGGTATTTG
TGGGGTACAATCAAGTGGAACCTAGATCAAGATCAGAATGTCACATGGGA
TGACTTCAAGGATCGTTTCTTCCCAGGGGCTGATGAGGGACGAATTTCTT
CAGCTGAAGCAGGGAAGTATGCCCGTGATGGTGTACTTGGACCATTTCGA
AACTTCCGATCCCCGTTCCCGTGACGATACGTGTCCTCTAAAAAAGTCTC
AAATCCAGCTTTTGCTACAATAAATTTCGTTTTTGGGACATAATATCCCA
CTTCTGCTACGTTGTTGTCAAAAAAAGTCTTCGCCCAATAAATAGAAGAG
AAGACTGTCCTTGCCGGAGAACTCACCGGAGACATGGTAGCAATAAGGGT
ATACTAATGTAGCAAAACCAATTTCGCTGGAGACATCGCCGGAGACTTTC
GCCGGATACTAATGTAGCAAAATCTCCCACCGTCGGTAGCAACATTGCAC
CTAGGTTGGCAGAACCCGCCGGGTTGGTAGCGATGCGATGCAACTGTAGT
GGAGGAGGTCAGAGTCGGAGCATGGCGGCGACTCCGACGAGGTGTTCTCC
GACAGGACCCTGCGCGACAGCGGTTGATTCAGCGGCGGAGCTTGGAGCAG
GCACGGTGGCCCGAGGTTAGCGAAGCTCGGAGGGGCACGGTGTCTGCATG
AGGAGGAGGTTGGGGTGCGGTGGCCTGAGTTCGATAGAGCTCGGAACCGG
CATGGCGGAGCCCATAGCTCCTCCATGGCATGCGCGATTTGCGGTCATGG
CAGAGGCGTGAGGACGCGAGCTCCGACGACCTGGTCAGGCGGCGGTCGAG
TGGGCTCCAGCAGACCTCATCCGGCGGTGACAGTTGCCTTCTCCAGCAGG
CCTAGTCCGGTGGTGGCGACAGTTGCGTTTCTCCATGCGGGAGCAGAGGC
ACGAGCGACATCCGGGGAATTGAGGAAGGAGACGTACATGTCACCGTGGT
CATGTCACTGTGCCGCATGCATGTCAAACTTGAGGGTCGCGGACACGATA
GCCGCTTTCGTGTCACTGTGCAAACTCATGAGCGAAAATCGAACCGGAAG
TATGCATAGGGCTTCAAAACCAGGTGGCTTAGAGCATCTCTAACGGTACC
TGTAAACATGGCAGAACTGTAAAGGTCCGCGAGAAAAGCGCTGCTCTAGC
GGTGCCTGTAAAACGACCCGGCGTGTTCTTTCGTTTATCGTGGCCCGTTA
AACACCTAGCTCGGTCGGTAGAAGTAGTGGCCACTCGGGCGAGTGTGGGT
CGAAACCCTCTCATTCGCCTGCACCCAACCCTAGCTCCACTGCCGCCGCC
AGCACAAACTCTAGCGAGCAATTGCGCGCGCACCACCGCCAGATCGGAGC
TATGTCTTGTCGCCGCTGCCATTTCGATGTTGGGGGAGGGCGAAGCGGAG
GCGGGGGGTGACAGCGACCGCCCCCCGCGCCGTTGCAGCGAGCTCACCTA
GGAGGACCGGAGGAAGATCGTCCACTCGGAGGGGCAAAGAAGAGGGTGGT
GAAGAAGTGGACGAACCACGGTGCTTGGCCTCCGGCGTCGCTCGCCCGCT
ACGTCGTTCCCCTGGAGCGCTACCGACCGCTATCCCCAGAGCACGTGTCG
ACGATCCGCAGGTACGCGTACGCCGATGTTCCGCCCTTTGGAGAGGGAAG
CTTGCACGCCGCTCCTTTGTCCCTCCCCTCCTCCGACTCTGACTTCGACG
AGTGGAGCGAGCCGCCCTCTTGCGTGCGGCCATCGTCATACACGAACAAC
TCCGACAAGGAGTGCCTCGCGTTCGAGCTGTTCGAGCTTGCGGGCGAGGC
GGAGATCATCCGCGAGCAGGCGGAGCTGCGCCAGGCCATCGAGCTCGTCA
ACACACACATCACCAGGGAGAGGGTGGAGGCGCGCACCACCACCAGCACC
AGCACCGTCGTCAAGCTCGAGCAGGACGACCTCTCCAAGGAGCGAAGCTC
CCACCGTCGTCACCGGAGCTCTTTTTGGTATAGGTCACCGCCGCGCTCCA
ACCCTAATTATGTAAAGCGCAGCTTTTTATGTAATAATGATCAGACTTGT
GTTCTTCGTCCAATTTTGCCGCGAGTGCACAAATTTGAATTATCAGTTTC
GTTTACCGTCACCGTTCTGCGCCAACGATTACGAACTTGCAATTTGCGAG
TTCAGTTCGCATGTATCGTGTTTTTTCAGTTCGTAGTTTTACAGATAGAA
GATGGTGCCTCTGGGCCTGTCAGATTACAATCGGACGGCTGAGCGGCGAC
GTGGATATCATTTTTTCACCCGTTATTTTTGTTTGTCTCGCAGCGGCGGC
GCTGAACGCGGTGTTCGCCAAACTCGGCCAGAAGGCGGGGCCGTCATGGA
ACATCAGCGGCGACCCCTGCACCGGCGCTGCCATCGACAACACCAACATC
GACAACAGCGACATCTTCAAGGCCGCCATCAAGTGCGAAGCCTGCACAGG
CGGCAATACCTCCGTCTGCCGCATCACCAGGCTGTAAGTGCACCTCTTAG
GCCCCGCCCCGCGCTCAGCCTGTTCGATGGAATGCCAGATCCAGCGGCGG
CTTTGTTCCTTGGATCAATATGATCGATTGGCAGATCGATAAGGCGTTAG
CTGATCGGATGCTTGCAATGCAGGAAAATATATGCCCTGGACGCGGTGGG
GCCCATACCAGAAGAGTTGCGGAACCTCACAGCCTTGACCAATCTGTATG
AACTCTCAACTTGCACACCTGAAATGAAATGGTCATATCTGTATACTCGA
TTGTACTATCTTGAAACTGACATTCTGTATATAATTCCAATCTCACACCA
AATTTACTCTTCTATCTGATTCAATGTTGTTTCAGAGATTTAGGGCAAAA
TTACTTAACAGGGCCTTTACCATCGTTCATCGGGGAGTTGACTGATATGC
AGTACATGTGAGATTCACAACTCAAAACATGATTGCAACAAATGAATACA
TTTATTCCCTGGCATTTAATCTCACACTTCCTCTCTTCAACATATAAGGA
CTTTTGGTATCAATGCATTATCTGGACCTGTACCAAAGGAGCTCGGGAAC
CTTAAGAATCTTATAAGACTGTAAGAAATATTTTTTATAACTTTATGATT
GTATTTCATCATACAACTGTAGAGTTAATTTCGGTTGAAGGATAGGTATG
CTGATAGTCTTCATGCTTTTTGGAATATAAAGTTCACATGCCTAACCTCA
AATTTTTGGTGTATTTGTAGGGGCCTTGGCGCAAACAATTTTAGTGGCTC
ACTTCCTTCGGAACTGGGAAACCTGACAAAACTTGAGGAACTGTACGTAT
TTACTGAATTCTGGGGACACTATTTTTCTTCTGCCAAGCCAGTTTTCTTT
TTTGCTTGGATTAGTCAGCTTCTTATCTAATGTGTACTGTTTCTGTATTT
CTCAATTACAGGTATATTGACAGTGCTGGCCTTAGTGGTCCACTACCATC
ATCACTTTCCCAGCTTACGAAAATGAAAAAATTGTATGCCTATAGTTGAC
GTGTTGTTGATATATTACAATGTTCCACACCATTCAATCTTATGTACTTC
TCTTATCTTTGTTTAGATGGGCATCCGATAATGATTTTACTGGGAAAATA
CCAGATTATATTGGGAGCTGGAGTAGTTTAACAGAGCTGTAAGATTACTA
CTGTTCTCAGTCAAAGTAATTCCGTAAAAAATGAAAATACAATTTCGAAG
TATTATTTATGCACAGTGAGTTTTGAAATAATATTTTTGCAGTTTGCTAT
AGTTATCTGCAAGCTGAGCTTTAGTTTTTGCTAAGCATAAATTCGTGTGG
TAGTGGAAGACTCATTTTAAATAGTAGCAGTTTTAGTTACTAGAGCCTAT
CTTGAATGTGCTGAATCTCCATCTGTGGCCTCTTAAGAAACAATCCATTT
AAGTTGTAAGATGTTAGATTAGTACCCGATAAGCATTGCATGTTCCTTCC
CCCACTATGTGTTAGATGGTTTCTAGTTTCAGATAAGGTGATAGTATCAC
TGAGCATTGAATTCACTTTCTTTTTCTTCCAAGGAATAGAGATATCTATT
CTTTCACTACTTGGTTGCTGCATTCGTCAGGAAATGATGCTTTAAACGAC
TAACTAGAACTATGGAACTGTAGGAGGTTTCAAGGCAATTCTTTTCAAGG
TCCAATTCCAGCTACTCTTTCCAATCTTGTCCAATTGGCAAGCTTGTAAG
TGCCTATTGCCGGTGTAAGAGCTAAATGTCATTCTGAAATGTGAAGGTTG
CAGCAGTGAAACTTAATAATCTACTTCTGTGGTGCAGACGAATTGGTGAT
ATATTAAATGGGAGCTCTTCTTCACTGGCTTTCCTCAATAATCTGACATC
TTTGAACACCCTGTATGTGTAACTTTTCTTTCAGTTAATGGCTCAAATTA
CAGTTGTAAATCTCCAAGTTCAATCCTAAAACATGTAATATATTTTCTTT
GCAGGGTTTTGAGGAACTGTAGAATATCTGATAAGCTCGTATCCATGGAC
TTCTCAAAATTCACGAGTTTAAACTTACTGTAAGCATTTTATTGCGATGA
TAAACTACAGTCAAGTGCCTTCCGTGCAAGATACTTAAATGCACTACTAT
GGATTATACACTGGCTGATGACATCTTTTCCTTCTCGTTCTATTATTATT
ATAGGGATTTGAGTTTCAATAATATCACAGGACAAGTACCCCAAAACTTG
TTGAATCTGACCTCACTGGCCTTCTTGTATGGACTCTCTTGATTTGCAAA
GCATATTTCTACGGAAGGAAGAGTTTTGTCATTCTTCTTGCTAATCTTTA
TAAATTTTGTTTGTGACTAGATTTCTTGGGACTAATAGCCTTTCAGGAAG
TCTACCAAGCTCAATAGGATCATCACTTAAAAATTTGTATGTGATGCGGT
TCAATTTTATTTACCCAATAAAAGCAAGCCGGTGTTTATGTAATTTGACT
AGTTTCTAATGGTGCTTTCATTCTATTATTTTGTAGAGATTTTTCTTACA
ACCAGCTCTCAGGAAGTGTTCCATCTTGGGCTAAAAATTCTCAATTGTAA
GTTCCAAATTATGAAACTCCCATCACTGGCTGAACCAAATCCCGCCTAAG
GGCATGTTTCATCTATATTAGGCTCTGGGAATGACTTATTAGGCTTATAT
GTACATATGAAATAAACTAGATTTCCTATATAAATCTGAAAGGCTGTTTT
GGTGCATCTATCTTAAGTATTTATAAAAGAAAGTAAGATGCCTATGGCTC
CTAGTGTTTATGGAGTAAGATATCAATCTTACAGTCTAGCACAAAATTGA
GCCAACTATTTATGAGTACGTCAAGTTTTCTTATTTAAGTTATAGCAAAG
AAGTCCTAAATATGCTATGAAAGTATGAACAGTGCATTCTAATTTTTGCC
TGTTGTTCATCCTACTTAGGAATCTGGTGACAAACAATTTCGTGGCCGAT
AGTTCCAGCGACAGGTTCGTCCATATTTCAGTATCTCCTCAAGACTTTTA
AGTATGATTAGTATGTTCTCCCACCTTGTATCTTGGGTTCAAAACGTCAC
TTTGTTACATTTGCAGTGTCTTACCTACGGGGTGGGGGTGCCTTCAGCGG
AATACACCATGTTTTCTTGGTTCTCCAAAGTGTGAGACTTCTGCATTTTG
AAATTTGAAGAATGTGACTGCTCTAGTCTAGGAACTAAAGACCCAACAAC
AGTTTTACTAAATTAATACCAATATTAAATAGTTTAACCTGCTTGCAGCT
TCTTCCTTCGCTGTGGACTGTGGCAGTACGCAATCCGTATCAGGGTCAGA
TAATTCTGTGTATGAACCTGATGGTGCCAGTCTTGGAGCTTCGTCATTTT
ATGTTACTGGAGCACCAACATGGGGTGTTAGCAACGTTGGAAAGTTCATG
GAGGCAAATAATGGAAGTTATATAATCCACAGTCCATACCAGTTTCTGAA
TACACTTGATACAGAACTGCTCCAGAATGCAAGGATGTCACCGTCTTCCT
TACGATACTTTGGTATTGGACTAGAGAATGGAAACTATACAGTTACACTT
CAATTTGCAGAGTTTGACTTCCCAGACACTCAGTCTTGGAAGAGTAGAGG
TAGAAGGGTTTTCGATATATATGTCCAGGTATGTTCTCGCTGTTAAGTGA
CAAACAGTACTCTTAGCTTATAAGCCAGTCATATTTTTCTTCTTATTTGT
ATAGGGTGAACGTAAGGAGCAGAACTTTGACATAAGGAAGGCTGCAGGCG
GGAAATCTTACACAGCTGTTAGGAAGCAATACACTGTTCCTGTCACGAAG
AACTTTCTTGAGATTCATCTCTTCTGGGCTGGCAAGGGCACTTGCTGCAT
TCCTTCTCAAGGCTACTACGGGCCTGCAATCTCAGCTTTGAGTGCAACAC
CAAGTACATCCCTTGATTCGAAATACTGCTTTTTTTACTGGCTACCATAT
AGCATATATATATTAACTTGGTAGAAACACATATTAAAGTTATGCTGAAT
GCAATCTTATGCGTCTTGAAATAAAATCAACCGAAAACTACCTGAGCATC
AATATGAAAAGGGCATGACTATGTGGCGATGGTTATTTATTTAGGGGCAA
CTACCGAACATCCACAGCAAAGTAGTTCACATTGCATGCATGTCATCAGG
ATTTGCTCTAATTCTGAAAATTCAAAATGTTTTAATCTCTAATGGCACAT
CCGACTTAAGATCCCTTTTTACCACTAAATCTGTTGTGACGAGATCTTCG
GAACTACAACCCATGTTGATATTTTCTGACAACTTGTTTTTGTTCGAAAG
TTATCAACCTGCAGTGTGTGAGTTGTTAGGCTGAACATAAGTAATTACCA
GCTTAAAAAATACATGTCATTTGAGATGTTCTGATGTCTTTTTTCAAGCT
CATAAGCTTTCATCCGGTAATGTGTGAGTTAACGTACTATTCGCGTGTTG
TTACCGGCTTAAAAACTAAGCTAGGTTAGATGTATCGTCAACTTTTTTTT
AGCAACTTAGAAGTTACAAAGATACAACATGTGAGTTGCCGGGCTAATTA
TAAGTAGTTATTAGCCTCAAAAGTATGTCATTTGAGATGTTTTAGTAATA
TTTTTGAGCCCATAATTTATCACTAGATAATATGTGAGTTACCATGTTGT
TCACATGTTTTACCCACTTTAAAATCTTATCTCAATTTGGTGTCTTGACG
TCTTTTTTTTGGAGCTCACAAGTACCAATTCTAACTATTTACTCAATACA
TTGGTAACTACACCGTCACCACGGTGATTACTTTTTGCTCGACACCGACA
CCCTGATAATTAAATCATTATCATCTTGGTAACTATGTACTCCCAACACC
CATCATCACCACAGTGGTATCTATTTATCCAACGCCTTTGGTAACTACAT
AATACCTAGATAACAACATCAAGACCATGGTGATAGAATTACTGTTTAGA
GTTCTGTGAAGGAAGTTTTAGAGAAGTGAAATACCTAGTGCAATATATAG
TCTGACATTTAAGATGTAATACACCAACCTCTTTGAAATATACTGACTCT
GCTGACATCACATTTTTAACAAGTGAACTTTGTGTCAGATTTCACCCCTA
CAGTGCGTAATGCCGCGGCAAAGAAGAAAGGTAGTAAAACAGGTGTGGTT
GCAGGAGTTATAGTTGGTGTGGCAGTTTTAGGATTGTTAGCATTTGCTGG
AATCTTTGTTTGGAGGCAGAAAAGAAGAAAACTATCGCTGGAGCAAGAAG
GTATGTGATACACTAGGACCACATTGTGTTCTAACTGAGCAAAGGAGTCG
TCGAAGTAAACTCGTTATATCTTTTGTGATGTGTCTTGCAGAGCTGTACA
GTATTGTGGGAAGACCTAATGTCCTCAGCTATGGGGAACTGAGGTCAGCT
ACTGAAAATTTCAGTTCTAATAACCTTCTCGGTCAAGGAGGATATGGATC
AGTTTTTAAGGTTGGTTTCCCATAGTCTTGAATTTTATTTTAAGTTTTCG
TTCTGGAAGTAATTTCCAATAAGCCAGTAGTACAAGTAAATATCAGAAGG
CAGACTTGTCTATATGAGTTGTTTTTCTATTTTTAGTTTCTCTACACACA
TGTTTATAAAATTCCTAAAATGAAGAAGGTGGCAAGGGTGGTTATTACAG
TGTATCTGGAGCAAATGACGTTTGCAGTGTGGTACCTGAATGAAACTTCT
TCTTTGTTGAAAAAATGTTGCTCTTTTTTGCAGGGGAAGTTAACTGATGG
TAGATTTGTGGCAGTGAAGCAGCTGTCTGAAACATCGCATCAGGGGAAAA
AGGAATTTGCGACGGAAATAGAAACTATATCTCGGGTGCAGCACCGTAAT
CTCGTGAAGTTGTATGGTTGCTGCCTTGAGGGCAATAAGCCATTGCTGGT
TTATGAGTACCTGGAGAATGGGAGCCTGGACCGTGCTCTGTTTGGTACAA
ATTCTGTTTATTGATGCAGCTACAAATCGCAAATTCAGGCTTAGTATAGA
TAACTAAAAAGTTAAACCCACATCTGCAGGAAAAGGGAGGTCAAACCTAG
ACTGGTCAACGCGTTATGAGATATGCATAGGCATTGCAAGAGGTCTGGCC
TATCTTCATGAAGAATCTAGCATCCGTGTTGTACACAGGGACATAAAGGC
CAGCAATGTCTTACTTGATGCCAATCTCAATCCTAAGATCTCAGATTTCG
GGCTCGCGAAACTTTATGATGACCAGGAGACACATGTCAGCACGAAAGTT
GCTGGTACATTGTAAGTGCTCTATTTTGCTAACCTTTATGTTTACATACT
ATTTTCATATGTATGCTAATGGTGTTTATCCTCTCCTTTGTCAAGTGGTT
ATCTCGCACCTGAGTATGCCATGAGAGGCCATGTAACAGAGAAGGTTGAC
GTGTTTGCATTTGGTGTCGTGGTATTGGAGACTTTAGCTGGACGACCAAA
CTATTACACTACTGAGGACCAAAACAAGGTTTATATTTTCGAATGGGTAA
GCTCACTGAGGAACTCATTCTCTGTGTAATCGGTAAGACCCCTAGTGAAA
TTCCTACTGAATATTGGAAATGTAGAGCTCACATACCTTCAAAGACTTTT
AAATCAAACCTCTCGACACAGTTTTCGCATATGTGAGTGCTTGCATCATG
TAGAAGAGCTGCAGTCGACTAGTCCAAAATTTACTACGCTCAATTTGTCT
ATAGTACTTGAATGCAATGTGCTGCATTTTAGCTTACCATCTCGATGCTT
TCAGGTCTGGGAACTGTACGAGGACGGCCACCCTCTGGATATGCTAGACC
CCAGGCTCGAGGACTTCGACAGTGCGGAGGTGCTCCGGGCCATCAAGGTG
GCGCTCGTGTGCACCCAGGGCTCACCCCACCAGCGGCCGCCCATGTCAAG
GGTGGTGGCGATGCTGACAGGCGACATCGAGGCGCCCGACTGGGTGCCGA
AGCCCAGCTACATCACGGAGTGGCAGGTCAAGGGCGGCGGCGACACCAGC
TACATGAGCTCCAACACCAACGGGCAGTCGAGCTCGGCGCGCGCCTCGTC
GCTGTTCCCGGGCTCTGTCATTGACGAAGGCCGTTGATATGATTCTCGTG
GCCGATCGATCAGTCCATGTCGGCGCAATTTGTTGAGAATGGTGTCAGTA
CAGTCAGTTTTTTCTGAAGTGTACATTCGATTTCATTTGCTAGGGTTCAT
ACTTGCATTGGCGCTGGAACTGTATAGCAGTAGTAGGTAGGAGTAGCAGG
TAAAAAGTTGTATGCGTACACGTGTGTATTCTTTGGTCTCTTTGGACGAG
CATAAGATTTTGCAATAATTGGCTTTTGGCTCAGTATTTCTAGATTTTAG
ACTGGT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.