Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AE016540

[Submit comment/correction]

Sequence	AE016540
Germplasm	BYU132 (oat)
Species	Avena erithiana
Probe	AE016540
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CTCGTATGCGTGCACCTGCTCCTCTACTCTTTCTGAAATAAAGCAGCGCA GCGCCTCACCCCCTTCGACATCTCCCTCTCATCCCCTCCCGCAAGTAAAA CCAGAGCCGCTGCCGCCGCTGCCATGGCCGCCTCGCTGCGGTCGCCGCCC GTCTAGCTCGCCACCACCGCCTCGACGTCACTGTCGTATACCGGAGCAGC AGCAGGAGCTCGCCTCCATCCCCTGGAACAAGCAGGAGCCGCCGCGCCCG AGGAGGAGACGCACGCTGCCGCACACGCCGCTCGCCACCGTCGCCGCGCT CAACGCCGCCTCGCTGTTCCTGCCTCGGCCACCTTCTCCAACACCCCGCG GTGATCCGCCTCCTTCCCCTCTCTGTCCCTGGTCTTCCTCTGTCGTCCCC TCACTTGCGCAGCTCGCCGTCGCGCCCGCGCGCAGCCGCTGGAACGCGAC CGGCAGTAGCAGCTCTAGCACGTACACCTCCCAAGTTAACTTCCCGAATT TTTCCCGGCGTCACCCTAGATCTTTTGCGAAAACTCTTTGAACAAAACTT GTAGCCCTATCTTCCAGCTTTCCAACGCAACAAACAGCGCTCGATTTGGA TCTTCACATGCGAAGAAAACGACAGTCGAAATCAAGGAAGATAATCTGTT TTCTGAACTTTGGACAGAGCAAACTGAATCTGTCCTGTTCCGCAGCCTTT CCCGACGCGTATGTGGCTCTTTTGGAAAAAACTGTCTTCTCCAAAGTTGT AGATCTTGGCAATATCTTCAACTTTCATTTTTACGGAATCTTCTAATTCT TTCTAGATTCGCCGCAATCTTCAACCGAAGTCGAGCGGATCTAATTCAAA TCTCAGAACTGAGATTCAGTTTCTTGAAGCTTTTCTAAAAACTAGTAAGC GTGCACGTGCAACGCACGTCTCATGTTACACATTTTTAGCGACTTTTACT ATCGAGCCCCTTAAAGGTGTTCCGATGTGACTGCGCGCATAACACGTTAC ACACCTGTCTTCACATAAAATTCACGATGACATAAATTCTTAAAATTTAC AATGACATAAAAGTAATTTATTAAAAAATAAACTGAAAAAATGTGTACTC CAGTCAATGGACATCATCATCGATGCTAATGCACGAGCAAAGTGCGTCTA CCAAGTCATCGTCTGTTGCATTGCCGACAGAAAATGAAGAAATGACTGCC AGGTAAGCTCAACTTGTGATGATGGAATAAATATTATAGCCCGATGAAGT CAGCTGCACTGCTAAAGGAAGCAAGGTCGATCTAATCTAAATAATTCTAG TAAAAAAAATCTATCTAAAGAAAAAAGGACAACACACCTTGACAGACCAT AGTCCAGTTCGCACCGTCAACTACCTCCCAGCTTCTCTCTCTCACTGGAC CAAAAAAAAAGCTTCTCTCACCTTCTCACGCAGCACACCACGACCGCCCC CTTCCACTGCCTCCTCGCCCCCGCCGACGAAGAGATCCTCCCTCTCCCCT ATCTGCGCGCTGCTGTGGGGAGGACCTCCCCCTCTCGTGCCTCCCGACCG CTGATGCAACAACCGCCCCGTCTGCTGGCTCACCGCCGCCTGACGAACGC CCCCTATTCTGCCTCCCCGTCGACGGAGGAGGATGAACCCATCTCCCCTT CTGCAGCTTGTACTCCTCTCCAAGGATCTGGACCAGCTTGGCGAGCAGAA AGACCATGGCGCCATTAATAGGTATGTTCCTCATACTATTCATTCCATGT TCAGTTCCTGATATTACATTGCCCAGGATGCAGATCGACTATTTTCAATT AATGAATGTCCAAGAAATTAGCAAGCCTAGAAAATATGAAGTACTAAGGA CCTCAGTCGACTGTTGACAGTAACCGACACACACATATTGGCAGCTCCAA ATGGAAGCATCAAATATGTCTCAAGACATCCACATACAAAGTCAGATTCT TCCAAAAAAATAATTCTCCCGTGTGATTATCTTAGATCATTGAGAGTTAA TTATTGTCTTCAACACATACAAAAACTACGTGAGAAATGGCAGGATGGTC GCTTAGTAGTCTAGATTCTGTGGATCTATCATAAAGTAGTCTAGAGTTTT TCTCTTTGTAATCTGGAGGAGAAGGTAATGTCTGTGTGCCAAATAGATTA GATGGTCAATATTCCATCATGTATGAGAAGTTTAGAAATATATAGTTACA CATACTGTGCTTGATCTCGGTAGCAACTGATAACATTTCGAAGAAAAAAC ACCAATAATTTTCTTTTGCAATGTACTTTTTAAGGTAAATATCAATGTAT GTCTTATGTCTTTGATTCTTGTTAGGTTGGAGCTTTGTTTTGGCATCACC AATGGGACAACTCTCGGTCCAAAGAAATAAATATGAAGTTTGATAGTAAA CATCTTTAGAAGGTCAATGCCAGATGTTCTCGGGCAAAATATTGTGAATG TCATACTCGCCCCAGAAGAGAAAAAAGAGTAAGTCTATTAATGTTTGCTT TAGCTTTCTACAAATTACATCATCTCTTAATTTAACCAGTAATGGTTGCT CTACAAGGTTGTGTTCAAAACTGAAAAAAACAACCACTTTTGGTTCATAA ACTCAAACCAACATTCTGAATAAATCACGAACATTATCGTGATAAATTGT ACATACCATAACTGATCGAGCTATAGCCTCGGGTTACAAAATTCATAGGA TTAATCCATCCTCTTGTAAAAATTGCTAATATGATCAGTAAATATAGTTC AGAATACTCAAGCTCTAATTAGTTACGACAAACATTTCCATTCATGGGCA TAAAGACATTCCGTCAGCTGCTATATGCAATCTGCGATATTGCTATGCTA TTTCTGCTGGTGGCTTAGGCATCGCTGGTTGGCCAGCTCATGTACCCTGT AGATGGCTAACTGGAAGTCAGTAGAGTGCTTGGCTATAGCAATGACGGTA GCAATCACGAGCCATCTGTTGGGCTGGAGCAGAGACTTGATTTGTTCGTT CCCTGCAAGAGTATACTTGTACTAAGTAAATTAGGACTTTTCCAAACTAA TATAGAGGTGTAACGGTATTAGTGGCCTGATTGGCTCTTTTAATTACCCA GACGATTGTCATAACCAAATTTTGTTAGCATCAAAAGTAGCTATATAGGT ACAACAACATCAATGCAAATAAACGATATAAGAACGCACCTATGTCAACC GTCTAAAACATCTCTATAGACAATGTTCTTCGTGCTTCTCCCGGATTTAT CAATCTCCTTGTTTGACTTGGCCAAAATACGTGTCGTCTTTCTTGACACT CCCCTTGACAATGCAACATATAGCCGTCCATGAGAGAATACAGGCTCGGG AAGGTAAATACCGACGTTTGGGATGGTTTGACCCTGTGCCTTGTTAATAG TCATCGCAAAACTCAAGCGGACGGGGAACTGTTTTCTCTTAAGTTTGAAG GGAAGTGAGATGTCCTCCGAGGGCGACATAGGGATTCTAGGTATGAACAC CCTCTTTCCAACATGCTGACCACCAACAATCTCTGCGTCGATTGCATTAT CCTGGAAGGCTTTGATCATAAGTCGTGTTCCATTGCATAGACCATTATGA GGGTCGAGGTTCTGGAGCAGAATGACCGGGCAATTGACCTTAAACCTCAA AACATGAGGGGGCAAGCCATTTGGTGTGATCGAGTTCAAAAAATCAATTG TGTAATTATTCTATAGATCATCTTCGATTGAGTCAAAGCTATGGTATAAC TTTTCTTCGCCCGGAGGCCTAGAGATCATCTTGTCATTCAGGCCATCCAC ATGCTCGTTCTTGGTCGAAAGAATTGCACGTGCGCTCATGTACTCTCTCG ATCTAGCATTGGCATGCAACGATGGGAAGACATCTTCGATGAGCGTGTTA ATAGCCTTTTCATCCTCGGTATGGCTGATCACAATGTCGCTAGGGAGAAG CACATAATCGTTGCCAATTGTCTCTTCTGTTCCATTTCCGATCCTTAGGA GGTATTCGGAGAACCAAGGATCAGCTTGTGCTCTCATATTGCGGGTGAGG CGTATCTTCTCGGTCTTCTCCCACAAATAGGATCTCAAAAGTGTAGCATC TGTGATCTGTGCTCTTGTTCCACGTGTCACAACATGAAGGACTTGCCTGA AATCCCCACCAAAGACAACAACCTTTCCCCCAAACGGCAAAGGACATTCC ATTATATCCTGGAGCGATCTATCAAGTGTCTCAACTGCTTGACGTTTTGT CATAGCAACTTCGTCCCAAATTATCAAAGACGCCTGTTTAAGTCACTCTG CTGTACCACTCTGCTTTGTGAAACTACACATGCTGTTGTCAGTTAGCTTG ATTAGAATTTTGAATCTGGAGTGCGCAGTAAGGCCTCCAGGCATTATCGA TGCTGCTATACCTGATGTAGCAGTAGCAATCGCTATTAGGCCCATGGAAC GCACCTTCGCAAGCAATGCCTTGTACAAGTACGTCTTTCCAGTGCCACCT GGACCGTCAACAAAGAATATCTGCCTTTTTTGGTTTGTCACATGATCCAT TATCTTGTTGAAACCAGATAGCTGCTCAATGTTCAGTGTGCTAATTAGAT CTAGATGTTCTTTGTCTGAGCTGATTTGCCTCTCCTCTGTTACCTCTCTA TACTCAGTGTCATAAGAATCATTAGTCTCAACCAGATCTAGAAGTCCATA GCTTGTAATATCCTTTCCCATAGATTGCAACATATCCCTAATATCTCTAA GGACCATTTGCTCTAGTGTTGCCTCATTGGATTGTGCAAGACGAAAATCT TCAGACATTGATGCTAGATGTTTGTCCCACATCTGTCGGATTTCGGTTGC CTCACAGAATACCAATATAGTCGCAAACAACCGTCTTAGGGCACAAGGCA TCTAAAATGTGGCTGTCTCGGTCATGCAATCATCAAGGGTCCTGTCGTGC TCAATGAGGCCTAAATGCTCACATGCCTCCCTAAATGAACTGCATGGTTT GCCATTTACTGTTTTTAAATCATCAAAGGAAGTTGCACCTCGGACATGAC TTCGGAGCACACGCAGGTAGTACCTCTCTCCTTCAGCAGGGTGTGCATAC ACAAGTCTTCCAATTTGTGATCTCTTATTTTTTCTATTCTGCCACTTTTT TTCCTGGCTATCCACCTATAATGTTCTGAAAACTCTCTGTACAACCATTT CCGTGCATCTGGAAATTTCCGGTTCATATGAAAGTACTCGGTAAGCATGG ACTTAGAAGAAGATGGTCGAGCGACAACATCTTCTAGATTATCACCCGCT TGAAATGCAATTGTATGCATGTTAGGCAAATGAATCTGGAGCTGCAGCAC AGATGGACTGACACCAAACATTTTAAAACCATAAATCCTGTAAAGAGCAT CCGGAGGAGTTACATAGCGTGCATCCCTATATTGTCGAATTTCATTGATG ACTCCACCATCATTGATGATATCCTGCTCGAATGCAAAGGATGTACGATC ATGCCCCTTATAGACATACTTGAACAAGTACTTGACTGTCTTTATACTCG AGCATGCTTCAACATTAATGTGACAGTTGTATCGCATAAGTAGAAACGGG TTGTAAGGGACGACCCATCTATTGTTCAAATTTGCTCCTCTGACCCTAAC TACACGCCCATCATCCCTCCTATATATGGGATATGAGTCCTTCCCTTGCT GTGTGGCATCACAAAATTCTCGAGGGTAACTAAATCGGCATTTTCCCTCA ATCATGCAAGGACAACTTTTCTTCAACTCACCGCAGGGTCATGCAGCATG TGTTTGACGACCAGTTCATGGAGAACAGGGTATTTGTCTTTGTTAGGTAT CTCTGCAGATATCACCCGATCATAGTCATCTGGGGTCGCTAACTTGCTTT TTGCTTTCATGATTAGTAGTATATGTTCATGTGGGAGACCTCGTTTCTGA AACTCTGTGACATGTACATAAGCTGCGACTTCTCCGAAATGCTTACCTTT AGTCAGTAGTTGCATCATATCTCGTTGTTTCGCTTTGAATATTCTTGCCA CCAGGTCTGGACGGTCATGTGGCAGTTGTCCAGGCTCTAGTTTCTCTGTT ATCTCCTCCCAATAGGGATTGCAGGTCATCGTGATAAAATAATCTGGTTT ACCCCATCGCTGAACTAATGCCATCGCATCTAGGAAACTTCGCTGCATGT CGCGGTCACCACCAGGAAATGTACGTGGAAGCACGATTCTCTTGCCAATA CGATCACCGCGTGACTCGCCAGCAACGACGGTGTCAACAAGACCCTATAA AAAAGTATATATGGTTATAGAAAAGCATACAACATCTTCAATGATTTAAT AGTATAAACTTGTGCACATTACCTGGTAGAGGTCAGCGCGTATAACCTTC TGATTTTCCGGCTTTGAGTACCAGTCAAGCCTCATAGTCTCAATCTTGAT GTACATGTCACTGGAAAAGGCGCCCCCCAAACAAGATGATGTTTAAAAGC TTCCTCCTGACCTGCATTTTGAAGCAGTAGTATTCTCTCGCACTAACAAA TTTTCTGGATTTAGTTGCATTATCCTTGGTGTCACCAAACTCGTCATCTG GGTTATCATCATTGTCATCTAAAAGTCGTTTGGCATCATCAAATTTATGT ACAATATAGACTCATAAGAACTAATAAATAATCAGGGATGACCAATATCT GAAGGTAAATCAGTGTCATGGTATTCATCTGGTGCAGGTAAATCAGTGGC ATGGTCTTCATGTGGTGCAGGTAAATTAGTGGCATGGTCTTCATGCGGTG CAGAATTGCCAACTTGTTCCCTAATCGAGTTATCCTCTGAAACACGAAAA CATAAGTTATCATTCATAATTAAGCAGTAAATACATAAATTAATAATAAA TATTATACCTGCAAGTAAATTAGAGGCTTGGTTTTGGTTTCCTAGTTGTG GAGAATTATCCACTGCATCTTGGGTCGTGGCATCAGGGAGGTCAACATAT GGCATCCAACGATTCCAACCTGTCTCACCCCGTGGGAAGAATAGGGGATA TGACAATGGGTCGTAGCAGCCATACTATGCTCTAATGTACAAAGTTCGGT CTCCTTTTGCATGCACGACAACACTTCTGTCAAAGCAATTTAGTGGGTCG CTCCCTTCAAACCATATCGCTGCCACCTGAGATGTAGTTGGGGCATTGTA CCTTCGTTGATCTAGGTTGATATCTGTGTTAAGTGAGATCTTATATTCGT CTAGATTCGGAACAGACCCAAGGCTTTTGAAAACTTGTGCATAAGGGTTT TGCTCTAGTATTCTAGAATCCTCCGTATGAGATCCATATTAAGATCTGGT GACCTCTTAGCCCTATGAAACAAGTTTTCGTCTGTATCGTAAATATAAAG CTGGAAATGTCGAGGGCCATTACCAGCTGGCACCAGATCATCTAGAGCGT GGTACAACCCGGCACAAGCCCGAAATGTATATACGCCAGTTCTTGCCGCA GTGCTGACCCGACGATCAAGGGTGACTCCTAGACTTGTGAATGAAAAGTG GGAGTTGAAATACCGTATATTTTCTCTAAAATATTTAGCATCCTCGTCTT CTTGACTTGTAAACAACCGTTTCAAATCTTCTGGAACATCCGGTGTAACT ATACCAACTTTTCCTTTTCTGCAACAAGATGCAGGCCCTTCAAATGGAAA CCGCAATGCCCCACAGTGGCGGCAGTCCGGGACTTTTTTTAGGACATGAT GTTTTTTAGGTAGGTCTCGGTAAACCACTTCATCAGTATCCACTGCGGGT GTTGCTCACGATGGCATCTAAGATTGTATGATTCAAAAGCAACATCTAGC ACATAAGAACATCCTATTAAGTTAACACTCATATTACAAAAATTAACACT CAACAATAAGAAGATGTGGAAAGATTATACCTTGTTCAGTAAATATCCTA GCCTCTTCATCAAGCTTGGGGTATGCAGATTCTTCATCTTGGAATATGTC CAAATAGTCTAGTATGCAATATATTGGGCAAACGTGAATGCAAAATTTTA TTGATGTACGTGAAATCTGAACAACAATGTATAAATATATACCCTCGGAA CTGGTTTGGTGAACAAGGGGCTCAAACATTCCAAATGGATCATCTGTCTG GTCGCTACCTACTATGAGAAGTCATAATATCAGTAAAGCATAAAGTCATT TTGGTATGTCCAAGAACACTGAACAAATACCATTATTCATGTGTGGAGAC GCTGCTGCATGATTTGTAGTACGCTTCAATTGGCAAGAAGTAAGGTTAGT ATGGGTGCTGCCATGTTCTTGAGTGGTTACCGTGAGGGTGGCATCTGCAA CATTGGCTGAGCATTCCCTGACAACCTTACTTTGTTTATAGTATTCACGT TTCTTATTCAACAAAATGTTCTTCTCGCGCGCTGCCATCGCTGAATATTG TTCCCTTCGTCGTTGGTGTTTGTCATCACGTCCAGTTCGTTGAAGATTAC TCGAGCCGATAAAAGGCTCAGAATCTGAATACACAAAAGGATTGTCAGAG TACACATTTCCTGACATTTCCTGATGGATATGCATGTACCAAAGGGGTAC CAAAAATATTCAGTAAAAAGACAACACGTAATTTATTTTTAATATCGGCG ATGCACTACCTGTAGATTGAATAGTGGAATTCGGCGTTCTTGGTGTCAGC ATTTCACTTTGTTGGACAGCAAGAACAGCTGACAGTGGTGTGAACGAACC TACATTGTCTTAAATTCACATTCTAATTAGCATAATATTGTATTATTTAT CTCTAAAAAACATACTGCAAGATGAAGATAATACCTGGTGTGCTTGTTGG GAAGCTGGGGGAGCAAGTTTGCCTATGATGACTAACTTGCATGAGATACG CATTATTTCTGTGCAGCCAATCAGAATCATCGGGGATATCTAAATTATCA TTGTCCATAGTGATTTCTCTGCCTAACTTCATTTGGGTCACTGCTGATTT TAATGTACCAGCTTCTTGAGTGTGCATATCTGTTAGGAAATGTCGTTGAA TGAGTTATGTACACACAAAATGGAAGTACCATATGAATAGTTGGTATGTC GTACAATGGTCACAATTTTCAGGGCCATTTGTAGTTTTAGTCTGAGCAGC ATCGTCACACTGTCTTTTACCATGGGACTCGACCAGTGGTGTACCTGACG CCATGGCTTCAGCTTCATCCAGTGTTGCAGCTGCGACATTCGTCCGATGA CGGTTTTCACGTCGTTTTTTCAATATCTCGTCTTTATGTAGTGCGTAGCG ATCCCTTTCTTTCTGCCTTTTTATCTCTTTAGGATCTGCAAGCATATATA GGAAATATTGATCAAGTGTTCAGTACATGCACAAAATGGTCATCATGATC ACCATGAGATAGGATCAACGGGGTGTCTGATGCAGTTGATCCATAATTTT CATCGGAAGCAGCAACTTTTTTGAGTTCATGGATCTCACGCCTTCTTTTT AAAATGTCATCTCTATTAAGTGCATAACGCTCTCTTTCTCTCTGCGTTCT TAGTTCTTTAGGGTCTGCAAGAAGCAGATGGTTTATTATTTTTCAGTAAT AACATGATAATTTTCTGTAGGCAACAGTATTAGTAATCACCTGAGGAGTT GGTGTTGGTTACGTCCTTCAATGGTGTGCGTTCCCCAGTGAGTTTCGAAG ACGACATAGCAAGGTGTGTTTCCCTATATGTCATGGCAGAGCACGTGAAA GATCACAACCACAGAGGTAACCATTATATCTGATATGCAATATTATACTT TCACTGGCTGTAGTAGTACGAATAGTCCAATAATTGGAACTTATGCAATC GAAATTGAGAAGTAAGACGACATTGAGAAGTAAGACGCGAAATAAACCTG TTTTTGCAAATAATCTGGTTCCAATTTGTGGTGGTATCCTGATTATATTT TGAATGTCAACACATGCATCCGTATCAGAGTGATCATCGGTGGTGTCTCT TTTGAACGTGGACGTCAGGGATCAGGCGCCTCCTTGGACGCCGGGTACGG GCGGGCAGCGGCTAGGGCAAGAAACAGCGAAGCAGAGTGATCGTGGAGGG CCGCTGCTCGCCGTCCAGGAGGTGGATGACGGAGCTTTGATGCGTGGAGA GCGCCTTGTGGGACGGCGGGGCGTTAATTGTGGAGGGGATGATGATGCGG GCGTTAATTGCGGAGGGGAAGACGGAGGCGGAGGGAAATCTGCCAGACCG TGGTCTGCCGGTTAACAGGGTGCATCTGGATCGTTGTTTGAAACGTGATG TGATGGTTGTAATTTTATTCGTTCGATTGGATTAAGTGGGCAGGATCCAA GGGCATTGGTAGTCCTGTGTACAATTGTGTGGGGTGCATGTAAGAAAATT CATGTTTGGTCTTTTATTAGTAGTGGGGATGTTCAATAAATATCCTAGCC TCTTCATCAAGCTCGGGGTATGCAGATTCTTCATCTTGGAATATGTCCAA ACAGTCTAGTATGCAACATATTGGGC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.