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GrainGenes Sequence Report: AE001917

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Sequence
AE001917
Germplasm
BYU132 (oat)
Species
Avena erithiana
Probe
AE001917
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CAGTAAAGGAACCCCTAGAACCGAGAGCCCTTCTAATAGGCGCCTCCGAA
ACGAACCCCGCGAGCCCCCGTCCTCCCTCCCATATCTCGCCCGCCGCCTC
CGGCAACGCGCGCCTCCCCCGATCTCGCCACCGCCATGGACGACGACGAC
GAGTTCGGCGACCTCTACACGGATATCGTCCTCCCTACGTCCGAGCCCTC
CCGGCCGCCGGCCGCCGAGAACCTACCCCAGGCCGCCCCGGCCCCAAACC
CTAATTCCACGCCAGCTCCCGCCTCGACCGCCGCCGCGGCCGCTGCGGAC
GAGGACGAGGACGACGACGACTGGCTTCTAGGAGGGAGCGACCCCGTAGC
CGGGGTCGACCCGACAGGCGACTGGGTCGACGAGGACGATGATGGCGGCG
CGGCGCCCCCCGCGAAGCGGGAGGTTGATGCGAAGCCGCCCCCCGCCGCG
GAGGAGCCCGATCCGCTCATGGGGGTCGGCGCGGACGACCCCGGTGCGGC
CATCCCGGGGCTCTCGTCTTCGGCGGCAGCAGGTCCGGCCGGGAGCGAGG
ACTGGGATAGCGACAGCGAGGACGACATCCAGATCGTGCTCAACGAGACG
GACGGACGCCGGCGGCTCGGGGACGACGAAGGCGACGACGAGGATGGGTT
GGACCTCATCATCGCCGATGGCCCCCACATCCCCGGCATGGAGGAGCAGG
AGTGGGCGGAGGACGGAGCAGCGGCCGGGCCCGACGGAGAGAGGAAAGAG
GGCGGTGAGGCTGCCAAGACGATGCCCATGCCTGGTGTGAGGATCGGGTA
CAGTGGCGGCGGCCAGGGGTTCAACCCGCAGCACCATTCCATGTTCAAGG
TCAGTTACTCGGGCCAAGAAGCCGTACGGTGCGCTCGACCCACCCCCACA
GAGGGAGACGGCGTAAACCTGGTTGCAACTCGCTATGCTTTATGTTGTAC
TGTGTAAATTACTGATAAAGTTTAGATTCTTTCTTAGATTCCTTTGCATT
CCTGCTTACTATCCGACAATGTAAACTGTAAATGCATTTCATATAACATA
TATATAAAGGAAAAAAGGGAAATGCAATGATTTTTCTTTTTCTTTTTCAT
GCTTTCATATAGCAAACGTTGAGGATTCCAGCCTGTTTGACCTTCTATGG
TGGAGTTATAATTCTTTGATAAGTTGGCAAAGTAGTTTCAAGATGGCAGT
ATCAATGCAGATTGGTCACTGAGTTACAAGCCAGTAACTTCATTCCAGAT
GCTGAAGCCAGCCATGTTGAGGAACACATCGATCGTTTCGTGGAGATAGT
GAAAAGGAGTGCAGCTGGTAAAATCTAGCAAGAGACAAGGCACACATTAG
TTGACATAACCTAGCTCAAAGAGCAGTCACTATGTTGTTCTTAAGCTTTC
CTGTCAAGTCCAATCTTCAGGCTTCATCCAAAAAATCTAACTGCTCTGGC
TGTACGTACTCAAGTTACAGCACTTCCTGGCTGTACCCGCTCAAGTCATA
ATCTCCCTAACTAAGATAGTCCTAGTTAATTCTGTGTGTGCTAACTCAAC
AGCAGAACTCAGGCGAGTTGGTAATCAGCTACTGACATTTCCTTCCTCGC
CATGAACACAAATACCGTCTCTACCTCGGGAGAGAGTCTAACAATCCTGT
ACTGAGTTTCTTAGAATTAATGGTCATCTGACTGTGGTTAGAGGCCCTGT
ATGACCACAGAAATGTAAGAACACCTGGATTATTTAAGTGCAGTTGTGAC
TGATCTCTTCGATCCTAATATCTGCCTGAATATAACTGGTTAGCTCTAGC
ATAACAAAATCAAATTACATACTAATAACCTGGGAATTTTCCAATCATAT
ATTTGCTGTCTTGAATTGTCTAGGAAACGTTACACTTGAACTTTTGCTTT
TCTGAAACTTGACTTCTTACCGTGTCTCCATGTGAGATGAAACCTAGAGA
TGCAAGTTTGGAACCTTTAGGACCCTCTATTTTAGTCTAGTTCAAACAAA
TGAACTAGTTTTCTCAAAAAGTGATGATTTGTGAAAATGTAGTTCATTTT
TTTGTACCAAAGAGGGTAGAGGGTACCCTAAAGGTTACCCATTTGCATCC
TTACGCAAGTGAATGATAAAATTTTATGCACGAGTGCATATGCTGTTATA
TTGAATAAAAAATTGCTTATCAAGTAATCCTGAAGTTGGATCACATGTGT
GCAAGTCATTGTCAAAATATTGCAACAAATGGAAAGCATGGAAATCTCAA
CTGGATATTGAAAGAAAGTGCACTTCAAGTTCATTTCACAAATTACATGA
TGTTTTGCATTATGCGTATATGGTCTTTATATATTCATTCATCATCATCT
GTTCTCATGGCTTGACTGTTTGCTGATCGATGATGTTAAGCACTTGAAAA
GTTGTTAGTCGGGAATTATGCGTTCTCTTTGACCTTTTTTTACTTGTTAA
ACCCTCTCCTATGTTTATTTTGATGATATTTGTTCTCCTTCTTGCAGTAT
ATACGACCTAGCAATACGCCTGTTGGTGGGGCTATTAGTGCTCCTATCCA
GTTCCGTCCACCTGGACCTCCAGGCCCCTTCTCTGGTCGAGGAAGAGGTG
ACTGGCGACCTGGTGGCGGTAGGGGCATGAATAAAGGTTTTCATTCAGGC
TACGGAATGACTCCATGGGGTGGTTCAGGTCGTGGTTTTGGTGGCGGGCT
AGATTTCACACTTCCCCCTCACAAGTAAGTTAATGGGTAGACATGCTAAG
ATCTGTTGTTCAATTATGCTTCCTTGCTTCAAAAAAAAAAAATTTATGCT
TCCTTGCTTCAATCTTTGGTGCAGTTGTGTGCGTGCCTATCTTGGCTGTT
AAGTACAGAGTTATGGATTGATCTTTGTGTAGTAGAGAGTTATGGGTCTT
TTTTTGGTAGCTAGAATTTTGGATCCAGTTTGGTACTAGGTAGAGAGTTT
TGGTTGAATTGGTAGGGAGATAAGATGGAAACAGAGGGCAGAAAAGACGC
CTGGGGTGCTGGATAGGGAGGGCTGGGAACTCTATCCCTTGGGAGTTAGG
GGAATGGGAGGGGGCTGGGGAAGGAGCAGGGGTAGTTAGATCATTTCAAA
AGGAGTTGTTTGATGTTAGGAGTTAGGACTAGAAAGTAGAAACCGGTTTA
TTAATAGAGCTGGGGCACTTCAACAATTTGTGTATGAAGGAACGATCATA
TGAAATGTAGCAACTCAACTTTGATTCCAGTAATCCATTCTCCCTATTTA
AAATTACAAAAATACATGTACTCTGTTGTTGGTGAGGCCTTCTATTGTGC
ACTTAAATATTCAGTTTGTTTCGAAACATGTTCAACTGAAATATCATATG
TTTGGGCAATCAAAACACAGTTGAAATATATTTGGCAATTGGTAAATGCA
TCTTTTTTATTCGTCACACAGTCAGTTTTATAGGCAAGACCAGTACATTA
GGGCATCTCCACAAGTTGTAAGATGGTTTGCTGCTTTATGTACATGAAGC
GACAACCGTGCACACACTCCAAGATAGAAACAGAGAGCAGGCTTGTATAT
TCTCTCACCTCCTATTGGAAAACTTAGATATAGTCATATGATGAGTTGTG
AGTTCTAGGCTTGGAATCAAGGAATAACTTGCACTCCTTCCGTTGTTGTT
TTTCAGTTATATCTAGAGATTTGATATATTTTATGCTCATTATTATTTTC
TTCCCCTAAAAATAATTTATTTGGTTCAGGGCAATTTATGAGATTGACAT
TGAGACCGCATTTGAGGAGAAACCATGGAAATACCCTGGTGCTGATATTT
CAGACTTCTTCAACTTTGGGATTGATGAAGAGAAGTGGAAAGACTATTGC
AAGCAAATTGTCAGTCCTTGTTTAACATTTGGTAGCAATATAGTTGTTTT
TTCCTTCTATTTTGTCCTTTTGTAAACTGCTAGTATACCTTTCTTTCACC
AGGATCAACAAAGATTGGAGTCCACAATGCAATCTAGAATACGGGTGTAC
GAGAGTGGGCGCTCAGAACAGGTTCGTTGTAACCCCATTTCCTAAAACAT
CGGCTACATGCAAGCTATGCAGTTTTGTGCCAGATGAACAGTATTTTATT
GGTTTTGTTCAGGACTACGATCCAGATCTGCCACCAGAGCTAGCTGCTGC
GACTGGCCATCACGACATTTCTGCTGATAATCGTAATAAGGTAGATAATG
GGCATACAGATTTTACTGCCCAAGGGAGAGCTGCTACAAGCATCCGACCA
GCAGCGGTATAAATCTCCCTCACCTCTTGTATGTTTAATTTTGGTTGACA
TTTATCCTAACCTTCCATGCAATGTTCAATTTTCCGTTGGTGATTTTACA
GATGTTATCTGAATCATTATTTGTGTACTTGCACATCCTATTGTACCCTA
TTACATGTGCCACAAAGCGATTTTTGACACACAACCGTGTGTATCTGTTG
AGTAATCATATGACATTTGGCTACTCATTGTGTAGTTCTGAGTTATCTTT
TTCTTAACTACCTCACAAAAGATTATTTCCTTATCGCAACTTAGAAAAAA
ATAGTGTCCTTATCATACAAACCTATCACAAATCCCATAGCTGTGTTTTT
ATTCTTGTATATGTGCTGTGTCACTGTTCACTTTTCATACAAACCACTTA
AGCGTATTTTCTCTCTCCAGGTGACAGGCAGACCTATACAAGTTGAAACT
AGCTTTGTAGAACGGTTTCCATCTGCTGATACACGTTCTCGAATGCGTGA
ATCAGATTCTGTTATAGAGGTAAACTGTCATTTTGATTTGGCATATGTTG
AAATTCTTCTCACTTGGAGCTCTTCAATTCTAAGCATTGCCTCATTTTTC
AGATTGTGTGTGAGGCTCCACCGGATGATCCAATAGTTGCTGATAATTCA
GTGGATCAGTCTGAGAAGGATTCTGAAGGAGTTAACAAAAAAAGCAATGG
TGTTGAGGAGAGCGGGGTCTATACATCAGAGAAGATGAATAAATCTCCTT
ATAATCCCACTTTGGGAAAAAAGGCAGAACGTACCAGAAGATTACCTGTC
CCATCTGAAGGTGATATGCTCGCCCCAGATGTCCACGGCCGTTCCCCGTC
CAACAACAAAATAAGGGGTTCTCCTGCTCGTGGAGTAAGGTATGTTGTAT
CCACAAAACTATTTGTGCTACATTGGACATTGCGGTAGATTGATTGTGAT
AATCTCATTTTCCTCCCCTGTTACGAATTTTATCATTTGGGTATTCACTT
TTGATACTGTATACAGTGCTTATTAGAATCACTCCTGGCTAACTAACAGA
CTGAAAGAAGGTACATATTCGTTCCCAACAAATTGTAAAAAAATCTTATG
GGTAGGTTCAGATAACCTGTTTGCCCAAGCAAGATGTGTGGTGTCACTCT
CACAACAAAGGGTGCAAGTGTGTGGTGTTCTCTTTTCTCTTTTTTAATTA
CCAAATAATAATGAAATGGACAGCCCATACTCCCTTTTTGTATCCCAACC
CTGCAGTATTTCATAAGTTTCTTGCCGAACTTAAAGGGCAATGCTCAGAA
TGTGGATTCTGAGATCTTCTAAGGATGTCATCGTACTGTTTTCTCTAGCC
TATGCTCCGCTGTGTTTCTTGTATCTTTTCTAATTATTTCACTTAATTTT
TTGCACTTTGGTTCTTCTTAAATGATTTTCTACATTACTTCCCTCAGCTC
TATATTTTTTGTCAAAGATGTGTTTCTAATGCTTACCCTCAAATTATTCT
TTGAAGGTTGAAAGGACGTTCTCTTGGTGTAAACCCTAGCCGAGAAACTG
CAAGCTCCAATGAAGCACCTCACCAAACAACATCCTCAAAGAGACGCCGT
GATACCCAGAGAGAGAACAACCCTGTTGATGACTTAGAAACTAAGGATAG
CTCAGAAGGGTCACCTACAGTTGCTGACGAAATGACAGACAAGCTGAGCA
CAGAAGATCAGTTTGCTGATGGTATGGTTGCTTTGATTGAAGTGGTTGGT
GATGATGCTATCTCAGAACCTCACAGTGATGATGCTATAAATGAGGGCGA
TAATGTGGATCATTCTAGTAAAAAACAGAAGCTCATTTCTAGGGCTGAAC
AGCCTGCTGGACTCAATAGTAGTGATCAAGATGAGTTGAAGACACTGAAC
AGTGAAAATAGTAGAGGAGGGAGGTCTGGTAGCAGCAAAGATCATCTGAA
ACGCCATGAATCTGGTGAAGAAGTTCTGCAAGATAGGCGATCCAGGCGAG
TAAATGATGTGAGAAGGCATCATGATGGAGAAGAACGCGATTCCCGTCGA
AAGGATGTGTACACTCGAGACATCAAACCTGATGTAGAAAGGACACATTT
GGCCTCTAGAGGTAGGGAGGATATCCACCACCCTCATGTGAACAGAGATC
GGGACTTGCGCGGTAAAAGTTATGATCGGGTAAGAGATGTAGAAATTTTG
CAGAGGAGAGAAGACAACATGCACAACAGAAGAGGTAAAGAGGAAGATTT
GAGACTTGACTATAATGCTGAAGGTGGTGCAAGGTATAGAAATAAGGCGA
GACCTATTGATAGGAACGACAGGGATGAAGATCCTCATTTAAGGAAATTG
TTGGATGTTGGTGACTTGAGGGGTTCTAGACAAAGAGAGCGTGGTGATAT
GGTTTTGAATCGTCGTGAAATAGATGATTCTCATATCAAGAGAAAGAAGG
ATGAAGAGAATATAAGGAGAATGAAACCTGAGAATGAAGATACAGTGCCC
GGTTATAGAGGAAGGGATGATCCGAACAAAAGAAAGAGAGAACGGGATGA
CGGAATCGATCAGAAACGAAGGGATGATAGTGTTAGGATGCGGGAGAAGG
CTGATGATCGTGCTAAGAACAAAGAGGACAACTGGCGACAGAGAGAAAAG
GAGGACAGGCAGAGGCCTAAGCATGAAAGCGCACCGATCCTTCAGAGAGA
AGAAGGGAGAGGAACTGGTCGAGGTGGACGGGTTATAGATGACAAACCTG
TCAGTGGTGGTAAGAAGAAGGATGAATCGAGATCTGCGTTAGTGAGCAAA
GAAACCCAAAGGCGCAGCAAACAAAACGAACCTGGGAGGAGAGGTCAAGG
TGCAGAAGAAAACACCAGTCAGAATAAAGGGCGCTCGGATGTTCGTCCAC
GTGATGACAATCCAAACAGCACTGAAAGGAACTCCAAGCAAGAAAAACTC
AGTAAGACCCATGACAATAATCGTCTATCTAGCAGTTCTGATGCTCGCCA
AGCTAGTAAGGATAAGCACAGGGAGAGCACAAGAAAGGGAAGAGGTTCTG
AGCCTAATGAGCAAGATCTTCACAGATCCAGCAAGAGAAGGCGTGAAGAC
CATGAAAGCCATCGTACTGGGAAGGTATGAAATTCTTGTTGAAAGTAACT
TTTGAAAGACATAGGCACTAGAAATTCTGGCAATTGACTACCTATTCACC
AGAAAGGTTGTCAGGTGTTTGAGACAGCTGTTTTGAAACAGAGTAGTATC
TGATTTTATAACTTCTATCGTTACAAAAGATATTGCAATGTAGATAGTAT
GTGCATATGATAGGATGTATACTTAATATGCACATAGGGCTTGTACCTTT
CTTCTTTGAGAGAGAAGGGCTTTTATTTCAGTGCTGCGTGGTTCTTATTC
CAAGCAAAACTGTGTTCCATATTTGGTGAGAAGTTAGTACTTGTATGCAT
TTGGAGCCAGCCAGTGAATTAGTTTGCGTAATACTCTTGCTGATTATTTT
TATTCTTCTGCCAAAGATGTTAGATATCCTAATCATGATATCCAAGTGCC
ATTTTGACAAGATGAGTATGGTCAGATTTGTTGCTGTGTTTCATATTACT
GTTTGAGTGCACCCACAATTCCCTGCAATGGTTCCAAATAAACCTCACTT
TATTGTTTAAGAAAATCAAAGCAACCTTTAGTATGGTGCAATTTTTTTCC
TATACGTAATCGGCATGATAACAAAGGCATCCAAAAGATCAAATAACATG
TTTAGTTGGCTACACACTGAAAGTAAGTGGTAGATTGGTCTTGAGAGAAA
TTGAAACGTATGGTAGTCAACAAATATATTAGAGGTCGACCAGGTGACCT
CACAGCAGAACTGTGTGACCCTGCAGTTGAAGATAAGGTTGACATGAGGG
TTTACCAGCGTTTGTTACTACATTTAGGTTAGCAAACAACTAATAAAGAA
CTAGTTTGTTGCAGCATAGAATTTCCCCTAGGGGACATCAAGGCAGATTG
ACAAGCAGAAACACAATACAAGAAAACAGGCAACTAATGTGTGTCTTTGC
ATCTCATGGAACTTGCATACTTTTTACCCAACATCCACCACTCATTCTAC
AAGGGGAGTGGTGGGAAGTGGGAAGGTAACAACATACTCCCTCCGTACGA
AAATAAGTGACTTGGATTTGTCTAGATTCGCATGTATCTAGATGTGTTTG
TGTATAGATACATTCATATCTACACAAACCCAAGTCACTTATTTCCGGAC
GGATGGAGTACATGAGGAAAAGAGTGGAGAAATTATCATTAATCATTCAA
CTTTTAAACATCAACATCAGTTTGATTCAATTGTACACTGGTGATATTCA
TCGTTCACAGTGGTAGCCATCAAGTGTGGCAGTGGTTGATGGAGTGAAGC
AGTGTTCGTAGTTGGACATGGCATCTGAGTGGGTAGTTGCCTCACATACT
GTTGTTGAGTATATACAAGTTAAATGAACAATACTATGGAATAATCAGTT
CCCCAGCCATAATCTTTACCCTCTAAGGGTACACAGATATATTCTAGTTT
TGCTAAAATGTAACCTTTTCTCTTTTATGTGCTAGGCAATTTGAAAAACA
TGTGGTTGGTCCTTGCCCTACCCGCCACTGTAAAAGATGTCTCTGTTATT
TGCTTGTGAGTTGTGTGATGCATTTAGATTTTTATCGTCTGGGCAGAAAA
TTGGCATGCGCATTTAATGATTTACAATCAGCCACTAGAAGCTTCAGATA
AAATTCAACAAGTGTTTGTTCTCAATGACTGGACCATTTCTTGATTTGCC
TGGATAATAATTACCTGTGACAAGATCACTTGTTGATGCACACTGGTAGC
TCTGGTTTCTGAGTGCCAATACCTGTTGGTTTTATCTTTAATGCATGTAG
TTCCATGTTTAAGAATTAAGTATCATCCTGTTAGCGTTAGATGTGATTCA
CATGGACTCGTATGAATTGATTTATGTGTTTACTCATCTGCAACATTTTG
GTCTCTGTTAGTGGTAAATGATAACGGTCAAAGCTTGAAACTTTTGACAT
TAACGAGCATAGTTCTTTTGCAAAGAAAACTTGCTGCTACTTGAAAATGG
AGAGCACGACATGGGTAAATGTATCAGAATATTGATTTTTTGTAAGGAAA
ATTACTGTTTGTGGGCTTATGCTTTTATATATTAGTTTATCTGTTTATAT
TATATTATTCACCCTCCTCAACACGAGTGCAAACAAAACTTTGTATAGGT
TGAGATGAAAGGAGTGAGGGAGCAAGAAAATGGTAGGGATCATGCTACGC
CATCCAAGACGAACAAGAATCCTCAACAACATGATTCTCTTGTGAAACAA
GGGGTAGAAGAAGCCATGTCAGATGATGAGAATACCGAGGATTCAAGAAG
GGGACGGTCTAAGTTGGAGCGATGGACAAGCCACAAAGAGATAGATTACA
GTAGTATTGCTAGTGAGGCTACACATATATTTCCTCCAATCAAAGCTGAT
GTTCATCCCCCCACAGCTGATGCGTCAGGTAAATCTGATGTTCCTGCTAT
AGTTGGCAACTCAGACGTCAAGAGCAGTGGTGATAATGGGCAAGCATCTG
AGAAGACGGCTGAGGAGCGTGAACGACATCTAGACACGGTCGAGAGGCTA
AAGAGAAGAAGTGAACGTTTCAAGCTTCCTATGCCCGGCGAGAAGGAGGC
ACCCCAAAACAAGAAGGTGGATGCTGAAGTGCAGGCTCCCCAGAGTGAAT
CTCCTGCTGCAGATGCTGAAGTGAAGCCAGAGCGACCGGCTCGCAAGAGG
AGGTGGACTGGGAGTTGATTGGTTGTCGGAATCATATCCTCGTCTGAAGA
AGTCGCAGCAGAGCTCATGGCAGAATGGTCGGACCTCCTCCCACAACAAC
GCCTTTCCTTTTGCAACTGAAAGTTGAATTGATGTATGATTTCTACTGTA
TAACTTAGATGTGTACGTGTACCATACATACATGTTCATTTGTGGCTGGG
GACCTGGATACTGTACTCTTCTTCCCCATTCCTTCTCTCTTATATTCGGG
GATTGAAAATGTGTGGCAGTAGTGCCACCAGACTCCCCATAGATAATGGG
AAACAGTCACCCTAGAGTTTCTCGGTTCAGGCAACCGCTACTTGGACAAG
AAATCTCTGGGTCTGCAAAGGAGCCACACTTTTGAAGAAGCTGGCCAGGA
AATGCTGCAAGGTGCTTTCTTATGAACTCCTCAGTGTTTTGAGAATACTG
GATTTTGTGTTAGTTGAAAGCTTTGGTGGTTGCTCTGCGATGCTTGCTGC
AGAAGCAACAGGCTTGATTCCAGTAGTGAGGGTCAAGTGGTGGAGATGGT
ATTACTATGTTGTATGTACATTATGATAAATGCTGAACTGGAGTGCATAG
GATGCAGCAAGGTAGCTTACTATAGTGTAGTGAATGTTTTTGGACACAGG
AATAATATACCTCTAGGCAGTGCTAGTTAAAGGGTAATACTTTGTTTAGC
TCTTGCTGATTAGCCATGTGTATGTAATTAGTTCCCCAGGAAGGAATTTT
GCTTATGAATGCTGACTTGACATGCCACCATCTACATGACCTGGGTTGGT
CGAGTTTTATTTTAGCACTTGAACTTTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.