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GrainGenes Sequence Report: AE000021

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Sequence
AE000021
Germplasm
BYU132 (oat)
Species
Avena erithiana
Probe
AE000021
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGAGCTTGCAATTTCTGAGAACTCAGAGGCTAAGAAAGTGCAAAATTCT
CCCAGCTGGTGATGAAGAGATTGAGCATCTTTTGTGCCCAGAGGTTGGTA
ATTCCGATGCACCGATGAATGTTGTCAATGCCGGTAAGTTAACGTCGAAA
GGCATCTCGGGTTGCTACGGTCTAGAGCAAGGGCTTTCATCCTCACTCAC
TATGTCACACTAAGTATATATGTGCAATAGCATATATATCCTCCCCGGCT
GGCGAGTCCCACCAAACATCTGTGGTGCATGTTGTATGAAATGCGCCACA
AAAGTTTTTAGTGTCTGTGGCGCATGTTTTCTAATGCGCCAATGACAAGT
ATCTGTGGCGCATGGATTTGCATATGCGCCACAGAGTAACTTGTCTACCT
ATAAGATGTTTCCTAGCAGTGAAAATCCAACGACAATCAATAATATTTGT
GCCAGAACGTGGTGGAACCAATCGCCGTATTTTATTTTTGATAAGTGCAT
CAAACTCCTCATCCATCGCTCCTCTCCAATTTGGACCAGCCAACGCAGAC
ACGAGTCTAGCTGGCTCTTCTGTTGCAGCAGATAAACACCAGCGTATTGT
ACCATCTTTATATTGTTTTGCTTGAGCAATACCCCTAGATCCACACGTAG
TAAGACGTTCTAGGGCAACACAGGCTGCTTCATAGGAGGTGCGTTCACAG
ATGATCTTCTGGAGACAGCAGTGCTTGAACAAGTGGATTCCGTACCTATT
GTCGTTGTTGGGGAGTCAGCAGTCGGCGTAGCAGATCATGTGGTCTGTGG
AGCTGGAGGAAGCCTCGTGAACGTTGTCCGCAACAAATCCTCGAGGGAAC
CGAGCGAGAGACGACAGGGCAGCAGCACCGGAATCATCAAGTGAAAGTCA
CATTTTCCGAGAATCACATGTAGTTGTTATTTCCAGCTGAGTCTTCAGCT
GATCCGTTTGAACTACTGGAGGCACCGATTTGCCTCAAATTTTATCCCGG
TGCTATGTTTCGTCTAGCTATATTCTGCATAAGAGTATAAACAGGACTAG
ATACAGGATTAGTAGTACGATTATTTCCCATATAAAAATCATCAATAGTA
AAATTTCGAAGAGAAGAATCGAACAAAAGAATTATTTTCCATATAAGAAT
TTTTTGAACGGAAAAACAACCTCATCAAATACAACATCACGAGATAAATA
GACTCCACCCGTGGATACTTCGAGACACTTAACTCCTTCGGGGCGAGGAC
TATAGCCTAGAAATACACATTGTGTGGAGCAAAAATCTAGTTTACATTTG
TTATAGGGACAAAGATTTGGCCAGCATGCACAACCAAATACACGAAGCGA
GGAATATTGTGGACGTGTACCGAGAAGACGATGCATAGGCGTGTCATTGT
TGATGACTTTGCTAGGAAGCATATTTATGAGATATGTGGCAGTAAGAAAG
GCTTCATCCCAGAACTTAAGAGGCAAACCGCCATTAGAAAGAAGCACGAG
TCCAACCTCAACAATGTGGCGATGCTTTCTTTACACGGAATGATTGCTCT
ATACCCAGTTCAGATGCAATATCCTTGGAACTCTTCAAACCAGCAGCAAA
CCCTTAATTTCTATATGTTTGAAGGCCACGAGGTGATCCCAAGATCTAGT
CGAGCTAGAAGGCCACGAGAATTACCACTAGACGTGCGGTTGCGGATTAC
TGATGAAGCATGTTAGTTGAAGCAGTGTAGTCCTCACGATCTGATGAAAT
TCACGATCGTCAAAGTACTGATCGTACAACACCTCTTCCGATATCCACAC
GTACTAGTAGGAGCGCCGGGCGGTGGACTGCTAGGTCCGGTACGCCGGCT
GGACTAAAATGGAGCTAGGGTTTCCAATGCATGGAATAACATAACCATGC
CCCTAGGAAATCCCTGCCCCAGTATATATAGGGAGTGAAAGTGGGCTCCA
CTCATTTGGAGCCTATTCACTAAAGCCTATATTAGTCACTGTGAGTCCAC
CTCACTGACTCAGTCTGTGTCCGATTCGGGTCCAGACCAAACAGGTTTCC
GGTTTGGGTCCAACCCAAACTTGCTCTTGTTCTTAAGTGTGTGACTCGAC
AAGTTCATGGTGATTCAGACACGATTTGAGTCTTACTCGTAATCAAGCAG
TCGGTAGTGGCTCTAGTAGAACGTGTCGACTCCCAAGTACCCAAGATCAT
GACGACATACCTTCCGATACGATTTGCGTACGAGTCCCTTTTGCCTCGCG
ATACGTCTTGTCAAGCTATAGGCTAATAAACATCATCCTTCAAATAGGTC
AACGCTCTTCTCTATCCGAGATAGGAGATTCATTCATTTAACTCTTAGTC
GGATGCCACGGTTAACACTTAACCGAGTCATGCATGGCCTTGCTTTCCGA
ATCATATCATCCGAGAGGAACCAGAGAATATCTCTCTAGACAGAGGGGAA
AATATCCCATCTTGGTAATCGACATCACGCAGCTTTATTACCAGTCGACC
CGAACTCTGCATTTATAACTGCCCTTTGGCAGAACAACATTTGAAAGAAC
CTAAGTCGGTAATCCACAACTTCGGTGCAATAACCTAAGAATTAAGGATT
ATATTGATTGAGACATATAAATGACGACTTGTTCGTTGTATCCTAATATG
GATCAGTCCGACTAGCATCACCATGCCCATGATAAGTAGAACCGAGTCAT
CAATCGATTTTCATATTGTCTAAGTTGTGTGTCCAGCACAATCTCAATGA
CCAATAACATCTAGTATGAACAACATGAATATATAGTTCCACAAACAAAT
TACATATTCAATGATACATATTACAAGTTTATACAAGGATAATATAACAA
CTTCATGAATACACCGGGATTAACATCATACATGCTTGCCTCTAGGGCAT
ATTGCCAACATATTTTTGTATAACAAGGATACTATTCTGGTGACACTGCA
TAAGAAGCTCTCGTCGTCTACTCGCACCTGAGTTGCAGAAATTTATCTTA
CTCTTTTGCTTCTCAGTGTAGCTGTGAAACAATAACTGTGTGCACCTCAC
TCGAGAAAGTCAAGAACTGCACCTCTCTTGAGAAAATCAAGAATTATTTG
ATCCTGCAGCGGGAAGGAGTTCGTGTTGAAATGAGGCACACCAAGGGCTA
GATTATCCCTTAGGATCCTGGTCATGTAACGAAGACAAAGACAAATAAGC
AACCAAGAAAACTATATTATCTATGTGTTTATATCTCATTTGTATAGATA
GAAATGAATCCATGTCGAAATACATGTACATGAGGTGTACATCGAGTACG
TGTGGCTATGAGCAAGCAGATTTTGCACTTGAGCAGGCAGCAAGCTGTGG
CCATAGTATTAGGCGAGTCGCACTCAGTTGGGGACCCTTGACTTGTTTTT
ACCTAGAGTCTGCGTCTCATCACTTTGTGGTGGGCCGTGGGAGGCAGACT
GAGAAAAGTCTGAGTCTGAGATGCATGCATATAGAACCTTCCTGCAAACA
TTCGATAAAATGGAAAATTAATCATATCACGTTCCCCAATAATAGAACCT
TCGGCATCTATAAGGATTTATTGGTGAACAGCTAAAAGTTCAATCAAAGA
TGCACAAAAATGATGCTACGAAAAGCATGTTGCGGTAATATTTCATGCAA
GATTTCGAATATAATTATTCTCATGTTCCTACCTAGTAGGAGTAGATGTT
TTCTACACGCGCTGCGTGAATATTCTCATATACAGTCGACCCACTAAGAC
TTGTACTCTGACCTTTTCAACTCAATAGTTTCACCATCTCTGGAAAAAAT
TACACGTAGAAAAAATTCATATACAGTAGCAGCGAGTACGTGTGGCTATG
AGCAATTAGATTTTGCACTTGACATGGAATCTGCGTCTTGATGCGTGGCT
ATGAGCAAGCAGCAAGCGGTGGCCATATATAGGCGAGTCGTGTGTCGGCG
TTAGCAACGACCATCACATCTGATTGATGCTAACAGTGGTCTTGGAATTC
CATATATAGTTGACTCGTAGCTAGCTGGGGTCTTCTCCACAATGCTCAGC
CGACAGCCTTATTCCCGTAGCAGCGAACTGCATGGGGTTAACAATGCGCT
CCAACACCCTTCGGCAGGTTGCCGGCCCTCCTTCAGCAGCGGCCGCCGGC
CAGCTCGATCGACCGCCCGCCGCTCCTCCCTCCTCTGCTTTTCCTCCGCT
TGCCGGCTCTCCTTCCTCCCGTGAGTGAGAGCCCCACCGCCACACGCGCT
CGAGCTCAAGCTAGGCCCCAAGCTAGGCCCCAAGCGGAGCGAGAGGGGAA
GGAACCGTCCGTCCACTTTTGACTTTGCGGTGGCATGTCTTGTAAAAATC
TCTAACGTGCAGGGTTAAAATTGTCCAAAAATCCACAGACGGATTTTCTG
TGGTACGCGAATTATTTTAATAGTATAGATAGGAGAAAATAGGGACAGCT
GGCCGGCTGGGTCAGCTCCCAACCAGGTGGGCCGGCTGAAGCCAGCCCAG
CAAACAAAAACAGCAGTAACTGGGCGCAACAGCCACCAGTCAGGCGAGCC
AGCCCCGTGGCCCAGCTCGCGCCAGCGTGGCAGCTAGTGGCGGAGGCCAG
GCGACCCGGATGGGGACCCTTGACTTGTTTTTACCTACGGTCGGTGTCTC
ATCTCACTTTGTGGTGGGGCAGGCAGACTGAGAAAAGTCGAGAGGCAAAC
ATTCCATCAAATGGCAAATTAATTACATCGCGTCCCCAATAATGCTACGA
GAGAAGAATGTTAAGATGATATTTGCGATTGTATTTCATGCAAGATTTGA
ATATCTTTTCTATCTAGTAGGAGTAGATATTATTTTCTACACGCTGGGCT
GGGTGAATATTCTCATATACGGTCGTCCCACTCTCTGACCTTTTCAACCC
AATGGCCGGTTTCACCATCAACTTTGTACTCTTGCCGGGTGTGGAGAAAA
AATATCATTTATTAGCAGCGAGTACGTGTGGCTATATATGATGAAGCAGA
TATTAATTGCACTTGAGATGGAATTTGCTTTTTCATGTGGCTATGATCAA
GCAGCAAGCAGTGGCCATTGGCCATTGGCGAGGAGTCGTGTTGGCGTTAG
CAACGACCATCACATCTGGCCCTGGAATTCCTAGCTACATTTATAGTATT
TTCTATCTATTGGCACTATATTAGCTGACTCGTAGCTGCTGAGCCTACAA
ATTGCGCCAAGCAAAAAAACACTAAACCCCAACACCAGACACACACCAGC
GCAGCACAACGATGAGCACCATACTCATCATCGCCATGGTTTTTGTGCTC
ATGTTTTCCATGCAAGCATCGGCCGGAGCCACGGGAGGGATGTTGCAGAT
CCCTTCCAAGGAGTCATTGGCTCACTGCATCCAGAGGTGCGGGGACGTCG
ACATCTCCTATCCCTTCGGCGTAGGGTCCGGCTGCTTCCGTCAAGGCTTC
GAGCTCACCTGCAACCACTCCACCAAGCATCATCCCAAGCTCTTTCTAGG
CAGCAGCGCTATCCAGGTCGCTGACATGTACATAGTCCCCAGCGAAACTT
ATTTGGCTACCCCTATATCCTTCCACCTTCCAACGAGTCCAGGTACAAAT
AATACCTACAACATGTCATGGGAGTCCCCTGCTAAAGGTATTACTCTCAG
TAGCGATAATACTTTCTTCGTAGCTGGTTGTGATTTGGATGTCACCTTGT
TGGAGTATGGAACCGGAGACATCATTGGTTCTTGTATGAGTAGATGCTTC
GGCAAGAAGACACCAACTGGAGGGCCTTGTAATGGAATAGGTTGCTGCAA
CATCCCGTTTCCAAGGGACCTACAAGGCTTTCAGGCAAAACTTGTCAGCA
CTAATACTACTGCAACACAATCAGATTGGTTGCACCCTGGTATCACGGCT
TTCGTGACAAGTGTAGATTATTATTACAGCGGTAATACAACCGCTGTTTT
CTCAAGTTGGACAAATCCAAGCGGTATTGATGACGCAGACCTTAGTGTTA
GCATCATGGACCAACCAAGCTGTGAAAGTGCACAAATGAACAACACAAGC
TATGCCTGCAGCAACGGTAGCAGTTGCATGAACTCCTCATATGCTGGTAC
TACTGGTTACCAGTGTTCCTGCCCTTCTTATGGATACGGCAACCCTTACA
TTTTAGATGGATGCATGCAAGGTGTGCTTAATTCCGGCCCTACTTTTTAA
TTTCCCCCAAATGAGTTAAAATTCCCTTCATCCTCTAGCTTAATTGCTCT
TACTTACTTTTTGTTTCTATCTATTGCGGAGCAGATTATAATCCCAAGCC
CAAAGATCACTGCCCCGTATCATCATCATGTGGAAGCATCACTGTTCCCT
TTCCCTTTGGCCTCCAAGAAGGGTGTTCTGCAGATGACAAGAGATTTCTT
CTTAATTGTACATCTGGTAATCTCACACTTTCGGTCTTAGGATATGCACA
ATATCATGTGACTGATGTATCCGTGGAAAATGGGACAATGACTGTTAGCA
ACATGGTGAGCGGAATTAATTCAAAAGAGGTAATATCAATCGAGCAGATC
GACAATTATGGAAATACAGTGAGTTCATCAGACGCCATGCTGGAAGATCA
ATTTGATTTCTCTCTAGAATACGACATGGTTATAAAGTGGGCCGTTGCCA
ATCAAACTTGTCAAACAGCTATGCAAATGGGTACTACTATGTATGCATGC
CGCAGTTCCCACATCGACTGCCTACACGTCATCCACGGGATAATATTTAT
GGGGTATCGTTGCAAGTGTTCGGCAGGCTATCAAGGAAATCCGTACATCG
AGAATGGCTGCACAGGTCTGATCCTCCTCACAGCCCTTCATTGTGCACTA
CAAATACTATTTTACAATCTCTTTATCTATAATAATTAATTGATTATTAT
ATATATATATACCATAAGGAAGAAAAATTGCGAAGTTCCTAGAAATTTCC
TAAAAACTGTGGACCATCCCTTTATTAGTATATCATCACAACCATTAGAT
CCACATAACCATGCTTGAACAGATCACATCCGTTAGATCTTCCGTCCTGT
TCTTGCACTTGAGCCACAACGCCCCATGACCCAGTTGCCCGCAACCCAAG
TTGCACAAGGAAAACCGCACGCATACCATAGTTGTTGCACAAAAATCCGA
GGTCGTTGTCCCGACGTAAAGTCAAACCGCCTCCACCGAGACGCACCGAC
CGAGCCGATAACCTTTGCCACACTAGCGACACAAGATTGTCGCCAAATCC
ATGCAAGCAAAAGATCCACTCCATGAAACTACTACCCATCATGGTTTTCG
AGGATGCCGCCTCGACTCACAAGCATCATCCACTCGGGTCCGCTTCCCTG
ACATTCATCCACACAACAACAAGAAAGACATGCGCCAACAAGAGGAGCTC
TCCAAGGCGATGCCTCCAAGAAGGGAACAACATAAACACCAGCATTGCCT
GCCTAGGAACCAGATATAGGGATTTCTCTAGGAGAGCCCATACCTACCAC
ATGGGTGTGGATGGAGATCCATAGCCAGCGCTTCGAAGGAGAAACAAGAC
ACCATTGTGTTGCCACTGTTGACACTAGCACGCCACCCATGGACATCACG
TGTTCTCATAGCTGACCTCCACGAAGCGGCGCTACCTATTGACACGCCCG
CACAAAACTTCATGCTCTAGCGGCCGAAATCACCTCGACCTGCCAGTTGG
TCCACTGACCATAGCCACCACATCGGTGATCGCTCATCCCCGAGGCCGTT
GCCCCGACATCCTCTAGCGGAAGTCCACCATCGACTAGGGAAGCTGAGCA
CTCGCAATTGCAGCAAGGGAAAAATATGTCTGGGGCTAGGGTTGAGCCGC
TTGTGGACCAACCCTAGCCCCGCCGGTTGTCTACCCGGCGACAATATTGA
CGCCCCTAGACCACCTGCGCTCCAGGCTAGCGCCACCAAAGCGCGAAAAA
AAGAGCTTGCACACCCACATCTTGTCGGTGTCGAGCCGCTTGTAGCCCAG
CTTGAGGACCGTTGGTCCTACGCCTGACAGCTGTGCCACCATGCAGCAGC
CCCGCCCCAAGACTTTCTCCTCACCACATATCCATGTTGGTGCAGTCGAT
GCTCGAAAACGCGCCCTCGGGCCAGGACACCCCATGCTGCCGCGCTGGGG
ATCTGCTGACTGACGCAACAGTTCAGGACCACCGCTGCCAACGCTACTAG
GGCTTTGCCCGGTGGGGCCCTCCGGCAGCGGTGAAAAGGGGAGGGAGTGT
GGTGGCAGCCGGAATTCGGGTGGAGCTTGTTCCACCCGCGCGACTCCATG
GGACCAAAGGGGGGCGTTTTTCGAATCGCATGGAGTAGGAATAGCCCGAT
CCTTTGTCGAAATGGTTCCATATTATCTAAAGTGATTGGATTGTTAGATA
TGCATACATGTACCTTATCAAACTAAATCTATTAGATCTACATAGTTATA
CCTAAACAAAAAACATACATTGGATCTTCATAATTGTATCTAAACATATC
ATAATTGTATCTAAACATATCTTCTAAAATTTCGGTGAATCTATATATAC
TAAATAATGTCTAGATTCATCTAAATTTTGATAAATCTGAGACATCTATT
TTGGGACTGAGGGAGTAGATCTTTATATGTTAAAAAATATATCATAGCCA
ATAGATCATGATGATTGCACTTATATAGGTCTGACACACTTTTTTAAATG
CACGTGTTACTTACTAATTGAACTATGAACGACAAGTTCATGTTACGGCT
GATTTAAATCATATCATATGGTAGTCATTACCGCATACTCCAATTCTAAT
CTGATACAACGGTCGATTGGAGCCCTATAAATATATGGCCAGTGGAATTC
CTGTATGCATGTAGAAAATTATTACTACTCCTCAGGGCGATACAATACAA
CAAAATAGCCTAGGGTGTGATAGGCACCAATATAAAGCATCGATGGAGGA
GTAGGCAAATGAGCGTTGATTACTGGAACGGAAGGCTTGAGGACACACTT
GTCATTTATTTGTTTATTATTTTCATTATAGAATATTAAATAAATTGTAT
ATGGACAAATAACCATGTTAGGGGGGCGGGTGGAGATGAACAAAATTGGA
TTGCTCTGAATTGCATACCGGGCATGCAGATTGTAACATATATCATATAT
TTATATACAAAATAAAGATTAAACATAACACTTTCGACAAACTAAGGATG
ATGCCCTTGTATTTGTGAGAGCCACCTTGCTTGTTTAAGAAAACATTACG
TGAACTTAAGTGAAGAGGATGGAGATCATACGAATTTGACTATTTTCTAG
CAAAGTTGTAATACATTTGCCAGAAAATATATAACCAATGAGAACTTTCT
ACAGATATCAATGAATGCGAAGTGCCACATTATTACTGCAATGGGACGTG
TCAAAATTTTCCTGGAAGCTACAAATGCACGAGTTGCCCCCATAGAAAAG
ACTTTGATCCGATACAAAGGCGGTGTGTCACGTCAGCAAAGCAACACATT
CTTATTTTGGGTAAGTCGTAGCTTGCAAAGTATGCTCATTGTAATTACAA
TTAACCAAATGATGAGTGACTTAGAGAGCGATGACTAAATGTAGGTATCG
CCACTGGAACTGGATGTGGCCTTGGATCCATAATTATTGTAGTATGTGCA
ATTGTATTAGCCAACAAGTGGAAGAAAGGCATCCAGAAGAGAATCCGACG
AGCCCACTTCAAGAAAAACCAAGGCCTATTATTGGAGCAGTTGATCTCAG
ATGAAAGCGCCACAAACAAAACAAAGATATTCTCCTTGCAGGAACTAGAG
AAGGCAACCAACAACTTCGATGTCACTCGAGTTCTTGGTCGTGGAGGACA
CGGTACAGTTTACAAAGGGATTCTATCTGACCAACGGGTGGTGGCTATTA
AAAAATCCAAAATTGTGGAGCAAACTGAGATAGACCAGTTTATCAATGAG
GTTGCTATCTTGTCTCAGATAATTCATCGCAATGTGGTAAAACTATTTGG
TTGTTGCCTTGAATCTGAGGTTCCTTTGCTGGTGTACGAGTTCATATCTA
ACGGTACACTGCATGACCTTCTTCACATTGACGTGGATGTTAAATGCTTG
CTGTCATGGGATGATCGCATTAGGATTGCAGTAGAAGCAGCAGGGGCACT
TGCTTATCTGCACTCAGCTGCAGCAATCCCAATTTTCCATAGAGATGTGA
AATCTACTAACATACTATTGGATGGTAGTTTTGCTACAAAGATTTCTGAC
TTTGGTGCTTCAAGGTCTGTTTCACTCGATGAAACTCATGTGGTGACTAT
TGTCCAAGGAACATTTGGCTACCTAGATCCAGAGTATTACCATACTGGCC
AGCTAACTGAAAAGAGTGATGTGTACAGTTTTGGAGTAATACTTGTGGAA
CTTTTGACAAGAAAAAAGCCAATCTTTATCAATGATCTAGGTGCAAAGCA
AAACCTGTCCCACTATTTCGTGGAAGGATTGCAAGAGGGAGCTATCATGG
AAATAATGGATCCTCAGGTTGTCAACGAGTCAAACACAGAAGAGATTGAT
GATATTTGCTCACTTATAGAAGCATCCTTGAGACTCCGAGGAAGAGACAG
ACCTACTATGAAAGAAGTAGAAATGAGGTTGCAATTCCTGAGAACTAAGA
GGCTAAGAAAGTGCAAAATTCTCCCAACTAGTGAAGAAGAGATTGAGCAT
TTTTTGTGCCCAGAGGTTGGTAATTCCGATGCACGGATGAATGTTGTCAA
TGCTAGTAATTTAAGATCAAAAGGCATCTCCAATTGCTACAGTCTAGAGC
AAGAACTTTCATCATCACTCACTATGCCACGCTAAGTATATATGTGCAAT
ACCACAATCTTGTCCTTCCTATTATCCATATGAATTACCATGTATTTTTC
ATGAAGTTGTATTATGTTACATAGTTATGTTCAGACGAGGGTATGTCATG
TAGTTTCACTTCCCGTATACTTGAATAATTTATGTGTAGCCTATGTGAAT
TGTACAATTATATTACAATTATTTCATTTGCAACGAATATACTTGCAATG
ATAACTTAAGATACATCATTGTATTTAAATTACGGTGGTGGATAAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.