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GrainGenes Sequence Report: AE021611

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Sequence
AE021611
Germplasm
BYU132 (oat)
Species
Avena erithiana
Probe
AE021611
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGACGAGCTCCAAGGAGGGAGGAGAGAGGGAGGCAAGAACCATGCTTT
CAGAGAAGTGGCGGTCCGAATCCACTCTGACAAAAGAAAATAACAGACTA
AGCCGTGCCGTAAGGGGGGCATTCTCCACACGGGACGGGGCCAAGGCCTT
CATGTATGGGTGACAGATCGGCCATAGGAGTACTCCGGGATATACACTAG
GGCAACTAATGTCGAGCATACGATGATGCTGCCCGTTTTCATTTCGTGAA
AGTCCCCGGCAGAGGAAAGGGTTGTAGGTGATGGCGCGTTCTGCTTCTTA
GGGCGATGAAATCGTTCCCTATGGGATCGTGCGTGGCAGCTGGTATAGAT
GATGATGAAAGGCGGCCGCTTGAACCGGGACCTATTCTCATAATAGGCAG
CAAGCAAAGCTAAATAGGAAAGGGGGCGACTGATGACTGCCTTTTCGTCA
TAAATCAAAAGGGTGGAATGTGGAGCTAATATGGCTGGCTACAAGTATAG
CCAAAGAAAGATGAGACGAGACGGACTGTCAGAGGACGCAGCGGGACTAC
CAGGGAAAGCCCGCCCCCGCTAGCTAACATAGATATCTATTCTCGGTGCG
CATATTCGAGATTTAGAATCTCTTTCCAACCAGGCCAGGCCGAATCGGGC
CACCACTTGGGATGGGAATGGCTCAGCCCACATGCATCATTTGATGAAAG
CACTCCAGTCCAGTCGCCTCCGATCAGTGGCTTGTCAACCACCGGACCGT
AGCTCCTCACCAAATGCCCCTGCGTTGGGGCAACACAACACATGACTAGT
TCGCTCAAGGACCACACCCTCTCGAGAGCAGGGATGCCGGCCGAGATGGA
GCGCCAACCTAGACTTTCCTTGGGCTTGCCTTGCCCCAACATCTAAATAA
GGGCGGGCGCCGAAAAGGAAGCAGTGACGCCTTTTCGACAAAAAGCTTAG
CTTGGTAGGCGCAGCTTACTCACCCTACTCCCTTAGACAATGCAATGCTC
TGAACACGAAAGTTTGCAGTTCAGCCCTCTTCTCCCATGCAGAGTCGCAG
GCAGCACCTCGGATAAAAGCACGGACGAGCCCACATGCAGGGAAACTTGC
ACCTGTGGTTCTGGCCGGGGACCCCGGTATACTGTACTATATGTGTAGGT
CCCTGTAATTCGAGTGAGATTGTCATGGCGCAAAAGCAGATATGGTCCGG
TATTCCCTTGTTCCCCCGTATTGGTTATGTTCCTTATTCCTCGTCTAGCA
GAAACTAATCGAGCTCCGTCTGATCTCCCAGAAGCGGAAGCTGAATTAGT
TGCAGGCTATAATGTAGAATATGTGCGGGATGCGATCCTTAATAGTTCAC
TGTTGGCGGAAGCCAATGTCTCGGGGACTCATTCTGACTTAAACAGGGGT
GGGTCTTTACCAACTTCCAAATCCAAGATTAGGGACAAAAAAGAGGGGCA
GGGCACTCTTCATTCTTCATTCGAAACTCATGAATGTCGGGTCGGAGGTT
TTTGCCTTGTTATCAAAAAGGGGAGTTGGGTAAAGCAAACTCCCTCCTTG
GACGAGCACGGGGCTTAGTCAAGTAGAACCGGTTGCGCTGCTTGATGCTC
CGATCGAAAACAAATCAGTGGGGCCATGCCGGTACGACAGAATATGCGTT
AGAAAGGACAATCCCTCCCCCCCTTTTTTGGATTCAAAACCGGGCCGAAC
TTCTAAAAAAGCAGCCCACCCGCTTCCATAGAACAATATCCGCGGCAACG
TAGACCTAAGTGGATTTATTGGATCCTGGGGAACCATCACAAGTACGGCC
GGCCTATAGAACGAGAATGCCGTGTCGTCCAGCGGAGCTTAGAAGAAGGT
GGACTCGGAGCCTAAGGAAGGTGACTCGCGCAGACAGCTGACTCCTTTTT
CAATAGAAAGGAATAGCCAAACCTAACCCAGCTGGCTAGTCAATCTCAGT
GATCTTATCGGCCGGCAAAGCGGAGACGGACGACCACGGTCCCGACCTTA
CCAGCCGCCGTAGGTTTACTAATCAATGAAGCCCCTCAACCTACTATCTT
TTCTTACAAACTCAACCAAGCCTAACCAAACCCATGCTCACGACATGTTC
TTGATATTGATTGAGTTGGAgggagtcagagactaccacggaatccttcc
atagtcaccccggtgaccttcgtcaccaaagcgtcacgacagtttccatt
cggcagggactccagtggggatcagtcggagcacgtaggaatgccgacca
ctacataagccacgtctggctgaggcgagcagctcggggagagtcttttt
aagtacaagaacgttgggtgggacgctagtacataaactagggtgcttct
tagcgctaatcttgcttcagcagttagttgtagcgcgccttccctccttc
tctcatttcggaaagatttggcagtattttcttatgatgacctggtcgac
cctacgaaacatcggtgtaaaagattgagtgggatggttatagtaagggg
cgaaccaagtgcttgcgcgaagaagcgaatcaatcagaatggagacaagg
aaaggaggagaggcgaaactcaacaaaaatggaaaagggaactcgaccga
ctatcatgagcgaagtgagggaattcacttcggacaggatcccttaggag
agagacagaaggtattatgaaatagaatcagatctttgacgatccagtac
aagtgtatgtatggactcagactttgatgactccctagtggccagggttt
tttagcttcaccctttgaacgtctcatttctctctctagctctcgactgg
acgtataggaatttcaggtacatccggtcgatgaaagtgagcatctatct
ttcctaccgcttttctttgtggaagacgtccgattgaatgatctccagtg
ggttctattaccatgtgtacccagcctgcttccttattttggaccagcct
ctctgcttctgtcagtatagaggaaagtcttcaatcccttgagagaaatc
caaaaatggccaataaaatacctagcatgacacatcagctacgccatctg
agcctgtccacttgctagtcaggaaaaataaccgctccgttccgtgggct
tctttcgctggtctcttcacgctcgctttacgagtgcaaccaagttcaat
aaactgttcatgctaattcatagactatgctggtttctatctaagagtcc
tgtgagacgcttccttctcatacacatctgaagcaacgtttgatcatcag
cattagagagttttgcaggtccttgagagaacgttatccagtcagttatg
acttgaccatggtctgaggtgaattggtcctggtccataaaacgaaaggt
gctgggcaagcgcagagaagtcgtctgaaggggagttccataggaatgtt
tcaacttcgatcaaccggtcccatgcctaaaaaataaagatggtcaaaat
aggggtgatataacccactgctcgcctaagaatgtactgacgtaatccct
actagggcttcccgaaggatccagctgctaagagggtccgagccataacg
gattgatgtgaccgtagcggcgactggaatcgatctgaatgaggcagtta
tgggacttatcttatataacatatacatggcggaaggattctaaaaggtg
ggggtaaaggtataatacgagcttccactttcaggcaatgagctagctta
actaaccctgattgcttaggtttaatacagtcatgttggatctgctacta
agaaaggaaagaaagactgattgcaacagctcaaccggatgagacatctc
ttatttacagaactgtgccaacgtgtgcctacattgtttgatttaccagt
tccgggtattggattttggaatagaaagaatgaaactagtaccagcttat
cgccaaccgtgctttctaccaactccaccaaccccagacgggaatattga
tttcgatttagccgcacctgagcccgcaactgctgcctctactccgccta
cttctttgccgacttcgccagcctcgcggggtaccgatttcctctgcttt
gtgtgcgtgccattgactcctttaatgggtcgaaacctacttagttctca
tttgtatttcgtctatacaatacaagaaaagaaggatttgtgttagcaag
acagagaatggaataagtaaaaagaaactagtgtgtaccctttactgaaa
agcaaatatgacagatagggtacgacatattgcttattcctgattgatct
agttgacgacagttgccttgttggaccgattgtggattgaatagaagttt
cttatataaagatattcgtgtttactgatttcgcatactgggaatggaac
ttgatgtaacccattggaactctctttgagactcattatctgttatatac
gacaggctaattaagtccttaatttaagaaaccttacttccttacacaaa
actgttatgttgttatgctgctcgtgcaatcaaaactgagaatagaagaa
aagagttccctcgggacccatcctcttcccttcgcttgtgtgactatcat
gagaagaattccattccaagaagtcaaataacaagaaaaagaaacgaggt
caagatctgttgttaccagtaccgacgaaatggagaaagtgtcctccggg
aacgcaatctactacattagttggtgtagccaaagaagaggatatcccct
tttttgtttttgacccattggtcttcagaccagacccataccatagctac
aaacactttagagtcggaggagactgcccagatcgccttcttgaggctct
ctgggcttatcggacgtcaatctgtatagccctggtcaacacccttctcc
ttagtcgttggcatggaccgattcttcccagtgaactcgacgattccctt
ccctgcgcgttctgctcgacgacgatatgactgataatcagaagcgagag
gctctgctctcgaaacttgacctcctcgatcgatgggagaaaaaaaggtt
acgagcggcagagcaccgcacaagtctatcaacgtcactcagccgcgctt
atgaaaaaaaagtcatataaataaataaataagattccaacgcacagcac
ctaagggtcaacttaagcccctccttaaggaaagatctttattgtaatag
cggtcaacccaggaaGCGTACCGCCTTGCCAATGAACACGGGGATGAACT
TCCTTAACCTTGGAATGACATGTACTTGAAAAAGTACTACGCCTGACCGG
CTTTCCCGGTAAGCCCGGCAAAATGTTTGGCCTATCTGATATTTGTGCGT
ACACCATAAATCCAAATCGATTCTGACTGTCTTCCAATCTACATGCTTGA
CTGAGGTGAGGAGGTGGCAGCTTTTGTTCACATCATATTCAAAGAGCTAC
AAAGGTTGTACCAGATagattcatatagtaggctcaatagcgctttgact
gatataggtaaatcaatttccaatttacatccgggtcttatctacttagt
tgtaggcattgccccctgaaaagaacttttcgggtcagataccccccagc
ttttgctatggggctggcgggttcactccttgccatgaatagggctggct
ccttccccgagatagatagaagccaagcccactacgcggtgcgaactcct
aaagaagagactgaacttacttactttctttcttgcttgcttgttcccta
ggattatgatgtttttcctgggttgttgcttgcttggtttgtttatgctt
agcagcggttcgttccaaatcaaaaaggtagaaaccgctcagaaacgatg
ttctcttgtcccctcggggacagcgctttcaccctttcctctgagctaaa
cctagacctcccactcccactctcacatgtaggcggagatggagactcgt
tcaaacttagtctactaaagatggaacctttcggttcatttccttaaggt
aggacgcccgagagcctatccccctatttcagttcagattcagtccgctt
agaccggagtccttgggcaccctatatacccccgaatgacaggtagccaa
ccttaatggagtcggcggcagaagtgcctgcttggtacggctaaacactt
ctcttttcttatttttgatccacaattcctggctccctttctaattgggt
agacttgggccattgtgcaattaccatcctttgtgcgaccaggccccacg
ggaaccgccttgaagatgtccacccctttcttagaaaatggaaagaaaag
gtgctcagcacgacgagccgccccttctacctttacttttttgccactct
gtctctttggagcatccgtttcctcatattatcgattcataaaggtccat
gaaaggaataagaccgcttcccttgcttcgcgcacctcgtcatagccctg
aaaagctcactcggagttctagttagagaatggggtatgattcactactt
gcctactgctacctgggtcgtgagatcgaagaaggtatactattagacaa
ggttcattccagctttgctgctctttttcttttgattctttctgttttct
tttttcttgagctaattcttttacttgctttttttttcttggcttggtgc
cggaatggaatcacagcaagacagggctaatggttggttctgtctactat
atttagtatgatttttgatatcttgatatctcgaccttaagaggcggttt
acgaaagagagagctcgtggaagacttgagaaatggaaatatctgtccat
tttagttccatttcttcctaacaggaaactcaaatgtcactgtgcgtaac
acatctaattggaagtggaatgaagataatgcgctttactctttcatttg
tagctggattacccctgggctaacttgaatctgttttgtttcgtttttca
ctaagcaattgcctttattactgaaaaaatcaaataccacttctaaaaat
cactttctctctcccgtactgatcctccttgcctttccttcttgtccagt
aaggttgaagcactagctcaaccacagctacagcttcttctcgagctgct
cttattccacctgtagcaccgcttacgagagcaagcagggtgaatacttg
tgtaacaacgatttctttcgcactaataaaataaggaaatctgaaactga
tactaaggataaagggaacgaagttcagaatctttcacaagcgattgtgg
gcattcatagaatatgagactagtgccttacttggggatcttcttgaaat
aaacagatgtccattcaatcggaattgagaacagaatactcatctttatg
agattccacgtccaacatctgaacggggaccttctcacccagccatgtct
caaacatatccttagggttctccatctccgggggtccagggtcaaagtga
agaaaccttctattcgtttcaagggaccccatctcaagagcctagggcgt
tgaaattcaaccaagaatctactttcccccatgctcctcgctctcgccac
catctccatccgtcgcgccagtagtagtgaagttcccactccacgtcggc
cggccgccatgaggttttccgaagctttgaccacaaggaacttatctatc
tccttctcaactgatcgcctttttggggagaataaaaggacactgttttt
tccatttttttctatcagggccctaatcggcttcaatggccttttcttgt
cacagataacactttatgccccacttccctgccaaatttcctgctgctcc
cttctgcattccgtggctttatgccctttctacctactcgataatagtgg
attcagcaggaacttaaacaactcatcattcatttctcgatcaatttgaa
accttagagtcaaaaagtccttccatgaatctagggaaggaaaccacctc
tgacttcacacaactctccctttctttggtcgaaggcttcaggtcaagat
cctttttcctatctattgaagatgcaaagagagatgcttcttcctcttca
agttggagtgcaagaagaaatgcggtaataggagttccatctaccacgca
ctcgcccacactccagctaacttcgcatccataatactcagctaggagga
aggtgccggacactatgaacacacatcacatgtacttggttgacttcacg
tcccgtctcacaaccgggtaagatcaataaacaaaacagctcagcttgct
tgcccaatccctattgagagatttcttgagcttgaacttccttttgtagc
tccgctcacaaggacttcttttcatctgcaatgaagcttataccaccact
tggtcagtaaggcctgattcaaaaaaagatcacacccccctccctacttc
aatggaaaaggggaatcgccctttcacagccgcccctccacaaattgata
cctatcctttcgcctaagatgatcacgaacgaagacagagaattgcgtag
ataggaggaggaaacgaaccaaccggggccccaaacaaacaaaagggaat
gagagaaatgatcggaacgattgaggaaaaaagagaatggcggccccttt
ctttcgccagggggcatcgtcgtcggggacaggcttcgagggttcttcca
tatctagatatagagatagatgatgatagagatctagatctttctataga
tagatctttgagaaattctattgatccgctttcaagatctatgaacaaga
gagatccaaaaaatatccatgtcaaaaaggagatgaatagatagggctga
gccgatagcagactgggtacatgatggggcgagagagggaaaaaaccttc
gggatggatcgggaaaagtgccctccggctcagcccacgacttcttccct
tcgcatagctcagtgactcccttcccccttttttcccgaatgaattcgcc
cgacacgacgatatgccctcctgtctttcttctcattgaatgaacccctg
cctcgtgacgtcccctatgctatgattcaagatttaaggaggaacttcgg
aagaagcctctggttggtctggttgtcccccggcggtgcccgggcgggcN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNc
gaccggacttcaactagattttataggggtcaggagggacaataaagata
tgctgttttctatcagtcccaagcggatacccccccctccccagcttcca
cggtccgctttacgagggaagagatgcggaggaaccagggccagagcaag
tgggttgggtatagagccgtaagcgcggttggggggtgatagaggatgtg
ctcctacggttcatagttgggtatgatattctcgtggattgttgggaacg
tcctctatattcgaaatatgcctttctaggagcattacgatctgcagctc
aaatggtcccttatgaagtctctatggtcttattcttattgtgcgccttg
tgagcacgtttggatccgccaaggcaatcgctcggatcttccctaaccca
acccgggaacggaccggagggaaccgcagcatgaggaatgtctgcgtctc
gtcgcaaaggctcattttgagtttgggtcatagggcgggcagtgcagtcc
ggggcacaagggtcctggtactacccaggtgcgaagaaccccggaggcga
ctgcaatgagcaaaatgtaactcaccggcctaaacgacgagcaaacactc
gaacgtgagagcaagggatcaccaacgaatggacgagactccaaggagga
ggatgagagagagggaggcaagaaccatgctttcagagaagtggcggtcc
gaatccactctgacaaaagaaaataacagactaagccgacgccgccgtaa
ggggggcattctccacacggacggggccaaggccttcatgtatgggtgac
agatcggccctaggagtactctcggatatacactagggcAAACTAATGTC
GAGCATACGATGATGCTGCCCGTTTTCATTTCGTGAAAGTCCCCGGCAGA
GGAAAGGGTTGTAGGTGATGGCGCGTTCTGCTTCTTAGGGCGATGAAATC
GTTCCTATGGGATCGTGCGTGGCAGCTGGTATAGATGATGATGAAAGGCC
GGCCGCTTGAACCGGGACCTATTCTCATAATAGGCAGCAAGCAAAGCTAA
ATAGGAAAGGGGGCGACTGATGACTGCCTTTTTCGTCATAAATCAAAAGG
GTGGAATGTGGAGCTAATATGGCTGGCTACAAGTATAGCCAAAGAAAGAT
GAGACGAGACGGACTGTCAGAGGACGCAGCGGGACTACCAGGGAAAGCCC
GCCCCCGCTAGCTAACATAGATATCTATTCTCGGTGCGCATATTCGAGAT
TTAGAATCTCTTTCCAACCAGGCAGGCCGAATCGGGCCACCACTTGGGAT
GGGAATGGCTCAGCCCACATGCATCATTTGATGAAAGCACTCCAGTCCAG
TCGCCTCCGATCAGTGGCTTGTCAACCACCGGACCGTAGCTCCTCACCAA
ATGCCCCTGCGTTGGGGCAACACAACACATGACTAGTTCGCTCAAGGACC
ACACCCTCTCGAGAGCAGGATGCCGGCCGAGATGGAGCGCCAACCTAGAC
TTTCCTTGGGCTTGCCTTGCCCCAACATCTAAATAAAGGGCGGGCGCCGA
AAAGGAAGCAGTGACGCCTTTCGACAAAAGCTTAGCTTGGTAGGCGCAGC
TTACTCACCCTACTCCCTTAGACAATGCAATGCTCTGAACACGAAAGTTT
GCAGTTCAGCCCTCTTCTCCCATGCAGAGTCGCAGGCAGCACCTCGGATA
AAAGCACGGACGAGCCACATGCAGGGAAACTTGCACCTGTGGTTCTGGCC
GGGGACCCCGGTATACTGTACTAATATGTGTAGGTCCCTGTAATTCGAGT
GAGATTGTCATGGCGCAAAAGCAGATATGGTCCGGTATTCCCTTGTTCCC
CGTATTGGTTATGTTCCTTATTCCTCGTCTAGCAGAAACTAATCGAGCTC
CGTCTGATCTCCCAGAAGCGGAAGCTGAATTAGTTGCAGGCTATAATGTA
GAATATGTGCGGGATGCGATCCTTAATAGTTCACTGTTGGCGGAAGCCAA
TGTCTCGGGGACTCATTCTGACTTAAACAAGGGGTGGGTCTTTACCAACT
TCCAAATCCAAGATTTAGGGACAAAAAAGAGGGGCAGGGCACTCTTCATT
CTTCATTCGAAACTCATGAATGTCGGGTCGGAGGTTTTTGCCTTGTTATC
AAAAAGGGGAGTTGGGTAA

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