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GrainGenes Sequence Report: AE000018

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Sequence
AE000018
Germplasm
BYU132 (oat)
Species
Avena erithiana
Probe
AE000018
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CCGACACCAGACACACACCAGCACGGAGCAATGATGAGCACGGTACTCAT
CATCACCATGGCTTTTGTGCTCATGTTCTCGCACCAAGCATCCGCCGGAG
GGATCTTGCAGATCCCTTCCAAGCACTCCTTGGATCACTGCATCCAGAGG
TGCGGGGACGTCGACATATCCTATCCCTTTGGCGTAGGGTCCGACTGCTT
CCGTCAAGGCTTCGAACTCACCTGCAACCTCTCCACCCCCAAGCATCATC
CCAAGCTCTTTTTTGGCGGCGGCAGCAGCGCTATCCAGGTCATTGGCATG
TACGTATACCCTGAAGGAACTTATTTGGCTACCCGTATAATCTTCCACCT
TCCAACGAGGCCAGGTACAAATGCCTACAACATGTCCTGGGTGGCCCCTG
CTAAAGGTATTACTATTGGTAGCGATAATACTTTGTTCGTAGCTGGTTGT
GATTTCCATGTCACCTTGTTGGAGTATGGCACGGGAGACATCCTTGGTTC
TTGTATGACTAGGTGCGCGGGAAAGAAGGCACCAACAGGAGGGCCTTGCA
ATGGATTAGGTTGCTGCCTCATCCCGTTGCCAAGGGACTTGTCAGGCTTT
CAAGCAAAACTTGTCAGCGCTACTACTACAGCAACACAATCAGATTGGTT
CCACCCTGGAATCATGGCTTTCGTGACAACTGGTCGTGATTATTACATGA
ATAATGCAACTGATATTTTCTCAAGTTGGACAAATAATATAAGCAATACT
GATTATTCCGGGGTGCTTAGAGTTAGCATCATGGACCAACCAAGCTGTGA
AACTGCACAAATGCACAACGCAAGCTATGCCTGCAGCACTGGTAGCACTT
GCATGAATTCCTCATCTGGTACTGGTTACCAGTGTTCCGCTCTTCTTCTC
ATGGACCGGCCTATGATGACAACCCATACATTTTTGATGGATGTATGCAA
CAAGGTGTGCTTCCGGCCCTACTTTTTCCTTCAAAATTCCCTTCTATTCC
GGTGCTTGTTCTCACTTTTCACATTTTTCTATTTACTGTGGACCAGCTTA
TAACCCCAAGCCCAATGAATCGCTGCAACACATCATCATCATGTGGAACC
ATTACTGTTCCCTTCCCCTTTTGGCTGGAAGACGGGTGTTCTGCAAACTA
CAAATTTCTTCTTAATTGTACATCTGGTAATCTCACAGTTGTTGCCTCAG
AAGATGTACAATATAATGTGACTGATATATCGGTGGAAAATGGGACACTG
ACCGTTAGCAATATGGTGGGCGGGAGTCATGCAAAAGAGGCAGTATTCAT
CCAGACTGACAATGATGGATATTTTGATGAATTTGATTTCTCTATGGAAT
ATGACATTGTTCTCAAGTGGGCGGTTGCCAATTCAACTTGTCAAAAAGCT
CAGCAAAAGGGTACTACCTATGCATGCCAAAGTTCCCACAGCGATTGCCT
ACACGTCACACACGGGGAAATATTTATGGGATATCGTTGCAAGTGTTCGC
CAGGCTTTCAAGGAAATCCGTACGTCAAGGATGGCTGCACAGGTCTCATC
CTCCTCATCACCCTTTATTTGGTGCACTAATATTATGTTGCTCTCACACC
TACAAATATCGAGAAAATATGTTTATCTATATTTATTAGTTAACCATTAA
TTATACAATAAAAGGACAATATGGAAGAAAAAAGCGAAATTCTGAACAAA
TTCCAAATATGTGTGGAATATCCATTCATTAGTAGATCACACGCATTAGA
TCCACATAATTATACTTTAGCAGATTGCATCCGCTAGATCTTCATAATTG
TACATACTAATAAACATATCAAACCATTAGATCTACATTAGCTAAACTTT
TTTTTTTGAAACGAGGCAAATGTTTTTGCCTATACTATTGATTCAGAAGA
AGAAATTTTCTTGATTAATTAATGGAAAACCAGTCGAAAACAAATACAAG
TTGGGGCGAGCCCACACTCCAACACAAACATGGCCGGGCCTAAACACTAG
TCCACACGGACAAGCGGGCCCAAGCCGAAGAGAATATGTCGTGACTTCTA
TGAGAGGAGTATGCACGGACTGGATGCTCCAACGAAGACGAAGAAGCTTA
CCACCCACTAGAGCTATGCCACAATGATGCAGTCAAGACAACATCAATGG
ATACATCCTCGCCCACACGAGACAAGGTCGACAACCTCAATACTACAAAA
CTTCCGTGACCATTATCCTTTCATCCAACTCCTCCGCCATGCCGAACATA
CCACCAACACCATCTGATGGGACCGCTGTCCCGACATAACACCACTCGTG
CTCGAGCCACAATGCTCCAGGACCCGGTTGCCCTCAACCCAAGTTGCATA
GGAAAACCGTATACAGACCACATCCACTGCACCAAGATCTAGGGCCATCG
CTCGACGACCCCGACGGGCGACGTAAAGTCAAACCTCCTATCGCCTCAAC
TGAGAAGCGTCGACCGAGTTGTTAACATAGACGCTCTAGCAACACAAGAT
TTTAGCACAATCCATGAAAGCAACAGATCGACCCATGAAACTGCCGTCAA
TCGTGGTTTCCGGGGCCTCGGCTTGGACTTGCAATCATCATCCACATGGG
GCCACCTTCCCAACAACCACCAACACCACGATGAGAGAAACATGCGCAAG
CGAGATGACCTCTCCAAGGCGATGCCTCCAAGAAGGGTGCAACGTAACTG
CCACCATCGCCCGCACGGGAACCCGAACCGAGGGATATCTCCCGGAGAGC
CCATACCTACCACATGGGTGTGGATAGAGCTCCATCGCCAGCGCCTCCAA
GGATAAAGAAGACACCGGTGTGTTGCCTCTACTAGCACCGATAAATTCGT
TAAAGCTTTCTCTCGAAACTCCAGAACGCCACCCAAGGGAAGTGAAAATA
CTTATTCCCATTGACAACCTCCACCAAGCGCCACCTGGTAACACGCCCAC
ACGACACTTCATGCTTGAGCTGTTGAAATCACCTCGAACGGCCACGACCA
CAACACCGTCGGTTGCTCATCCCCGATGTCACTTCCCGACATCCAATGGA
CAAAGCTCATCATCAAGTAGGGTAGTTTTTTTGAGAGCAACCACATATTT
CATTAATAGAAAATCAAGTTACATGAGTAAACAAACGCGAAAACTAATAG
ACATACCTGGAGAAAACAGATATCCTGAAAACGTTGCAGAGAACTATCCC
TAAGGTTTTCTACACTAGTTGAAGCCAGCGTTTGTCGCCAAACACCAACG
CCACCTAGACGTGCGCTGGAATAGATGTCGAGCCTCCACCTTTTCCGGAT
CCAAGGGAGCACCGTCGCCAACGAGGCTTTGTGAGTTGATGAACAGGCCC
GCTGCAAGCAACAAGACACATGTCGCTATGGCATGTCTACTGTGAGATGT
CCCGTGCTACCTTGAACCAAGATCCGCCACATACCATTGGCGAAGTCGAG
GAATAAAGGTAAATCCACCACCTCTGGACCAGCATCCTTGCTCTAGACCA
TCTAGCTTGCCCTGGCCCCCAACGCCGCCGTGGATAACTACGAACGCCAC
AGACACGTTGAGATACAGATCTCGCAAGATCTGAAGATCCGCGAGATGTC
CAAGCCACCGATCTAAAGGATCGACAAGCACACTTTGCCATCAACTTCTG
AGACGCCTCCGTGAAGGTCACTGTCGGTGTGGGAGAAGAGTTGAGGCATA
TTTATTCGCCCGTGCGTCGCTCCCACCACCCCAACGACACACGACATAAA
AAAGACCCTAACCCTAACTACAGAACAAATGATCAAGGTATCCCTCCTGC
TGCTATCGCGGCATGGAGGGAGAGGGAACTCACGCTATGGCCGACAGAGA
TTGGGGGGAGGGGTTTGGTCGCCACCGCCTCTCGTACGGAAGGAGGAGGA
CAAAGCAGTATCGAGTAGGGAAGTTGTTAGGGATGTAAGCGGCGTGCCAT
TTAATCCCGCGTAATACCGTTTATCAAGACTCCCGTTCTCTTTTCCTGAA
AAAATGAACAAACCAGTTGAATAAATGGGAATTGCGGATGCCGTTTAGGC
GCCATTTACATCCTTAGCAGTTGTACACTCCCAAACGACGCGCAACAAAA
GCCATATATAGCCCACCAGGCAATGGCGCCACTCCCGACCAGCTATGCTC
CATGCTAGTTCGACGCAAGACATAAAGACCTTCACCTCGCCACAACTCCA
CACCGGTGGTCGTAAAGGAGTATGTTGTCCAAGTGTAACCTTGTTGAATG
TTTTCCTTTTGGAAAATGATACATATCAGCTGGGGGATCGCAAACTTCCG
ATCCCCGGGGTCGCTGGCCACGCGCCTCTCACTCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCGCACAACAAAATCATAAGCACACACCACGTTCTCTT
CCATCGAGACCAGATTTCCTTTATCTCTTACCTCCTTCTGTGCGCCGCCA
CGCTGATTTCTTCTCGCGTGCCGCTGCCCCCATTGCAGCTTGCGCCATCA
CACTACCGGGCAGCCAAGCTGCCATGGTCCCTCACCCACTCCGTCGAGGA
ATGTTGGAAATTGGCCCCGATACGCCGCGTCGACTCGCCAAGTACTTTCC
GGCGGCACGCGCACGTATATGCTAAGCTCGATTACTTTCCGAGCTGTTGA
GACGAAGACTTCCGGCGAGACGTAGCAAGTTTGCACGTACGTATGTAGCT
AGCCTTAGCTTTCCTAGCTGGTAGCTCACAACGCACGAACACAAATCGCA
GGAACTCGATTGATTGCAATACGCACGTATCATGCGTCTTTTCTCAATGG
CTCGGTTATTACACGGGACTCTTACATGTATATATAGCAGATTAGTACAG
CTAAACTACTAGGACTAGGAAACTAACTCCTACACTAGTCGGACATAGTA
CAAACCTACTCGGATACACGATACCTATATGACCCCGTGTGTGCTCCGTT
TCGGGTTCGATCGTGCTTAATGCTAACAATCACCTCCCTAAGCACGATGT
GAGCTTCACCTCCACCCGGGTCCCAATTGCGCTAGCAGCTCCTCGCGGGC
GTCATCCACGGCATTTCTTTCGTCGTCGCTCCCTTTCTCAGCACCCATGT
CACCAACTTTGCTTTTGTCGGCTTCTCCATGGCTTCATGCCGATATTCCT
TTTTGTTCGCGCCCTTCTCCACGCCTTCACGCCGACAGTCCTTTTTATCC
GCGCCTTGAGACATTATACTTGGTTCGATGAAGTACTTTCTCATCGATGC
TTCGTATATTTGATCTTCTGCTTGCCGGTACTCTTGGATGCAATAGAACA
AATATATAGGAGCTAGCTCACGTTGGTTGACTAGAAAAGCTAGCTCGTGA
CTAGCAATTCTGACTTCTACCTGCTCCTGACCAACGTCGTCTTCTGGCTC
ATCCGGAGTAGCAAGGCATAGGTTTCCTACCTGTAGAGATTCCTCTTTTC
TTTTTGAATACCTTTCTAGCGTGTTTTCTTCTAGCTTCTCTATACCACGT
GAAAAGATTCTTGATGGATCTGTACCCCCTATTGTTGGGTCTCCTCCATC
TGTCGGACCACCAGTCCACACTCTTGGACCGTCATCTTCTGGCCTTGCTG
GCCTGTTTTCTGGGCTCGCTTCAACTCCCCCTCCTCCTCTAATTGCTGGG
CAAACAAGTGCAAGTATCGCTGATGCACATGTGCATCCTTCCAGCTCCGT
GTCTTTGGGCCACAGACTAGCCTTTTCTTCAAACTCTTTGTCTTCTGGGA
GAATCCCTAGTGCTTCTGGCCTAGTGTCCACGCCTGGAGCACCTCCTAGG
CCTTCAATGCCTTCTGGGCCTGAACTTGCTGACAATGATAAGCTTGGTTG
ATCCATATTTTCTTCATACTCAAGATCCCACATGACGTGAAAAGTTAGAT
ATCCCGGTTCGTTGGAGCCCCAATTCCATGACTCGCCTTCCTCAAAGATT
ACGTCGCCCCTGACAACCACCTTATGGGTATAAGGATTGCACAAGCGGTA
TTCCTTTGAGCTTTCATAGCCTGTCATGATCATTGGAGTCCTCTGCTCCG
CTAATTTACTCTTATGGATGGACTCCGTCTTGACATGCGCCACGCACCCA
AAAGTGCGAAGATGATCAACCGAGGGTTTCCATCCGTACCATGCTTCGTA
CGGCGTTATACCAACTCCACTCTCAGTTGGCTCCATGTTCAGCAAATGCA
CAGTCGTATTGACTGCCTCACCCCAGAATTTTCCTGGCAAGCCTTTACTC
TTCATCATGCTCTGTGCCATGGTCAACACAGTTTGATGCAGCTCACCCTC
CTGATCAATGCGTAGGGCTCTTATCTTCGCCTCCACCTTGAACTCTTCAG
CTTCCTTGATCTTCTCGAATGCTTGTTGAGCTTGACCCTTACTTTTTAGC
AACACAATCCACATGTATTTACTATGATCATCCACCACAAGCATGAAGAA
CTTATTGCCGGACGGAGTTGCAGGTGAAATTCCAATGCATAGATCGCCAT
AAACAAGTCCCTAGGCTTCACTTGCCTCAAACGTGGCTTCACATGGTACC
GGGGCACTCCGTTCCTCGTGATCCACACACGATAGATCGTGATCCACTTG
TGCCACAATCTCCGTAGCCGGTGATGGAGGATCCTCCTCGTCTTTCAGCT
CAGTTACTTCGAGCATCAACATCATCGGTCCATCATCTCCTTCCTAGGCG
ATGAGAGCCCTCTCCTTTTCCTTTGGTGGTTTCCGGTAATTAGCCTTGAA
GTGAGCGAGCTCGCCGCAGTTATGACACATTACTTTCTTTATATCAAACT
TCCTCCGCGGCGGGGCGTCATCTTCATCCTCCTGCCCTGCGATGTACTTT
TTCGCTGGGCGTTGCTTCTGCTTGACGCTCATGGAGCCTCCTTGCTTTTC
TTTCGAAAGAGTCATCCACTGCTGCTTCGTGAGCATCAGGTGCTCAACCT
GTTCTGGATCACCGAAGCTGATCCGAATTCTCTCGTCGTGTGCCTTGAAT
ATTTCAACGAGATCCTCAACCGTCAATGTATTCAGGTCGAGACATTGTTC
GATCGATGTGACGATCTGCATGTAGCGCGCCGGCGCCGCACGTAGGAACC
TTCTAACGTTCTTGACCTCATCTAATCTCTCGCCATATCCCCTGATTGCG
TTGACGAGGGTAACGAAACGGGAGGCAAACTGATCAACTGTCTCGCTCTC
CTCCATCTTCAGATCTTCATAACTTTTTGTCAAAGTTTGAAGATACGCTT
CCTTCACGCGGGCATGACCTTGGTGCAAGATCTTGATCGTCTCCCATGCA
TCCTTTGCCGATTTGTTTCCGACGAGGTGCTGCATCATGTCCTTCGGCAC
AACGGAATAGAGCGCCGTTAGCGCTTGGCGATCCTTCCGGTACTTCGCGC
CTCCCTTGACGTACTCGTCGCCTCCTGGATCTACGGCCTCCCAAACCTCC
CGAGACTCCATGGCCACCTCCATGTTGAGTGCCCATAGTCCGTAGTCTTT
ACGATCGAGGCGCAGAAACAAAGCCGCCCCCACCGTCTCTGTCACCGGTG
CTGATGCCGAGCTCTCGCCAAACTTCACCATCGCCATGACCTCCTAGTAC
TTTCAGCAGATCACGAACGACGACCTTGGCTTTGATACCAATTGTTAAAA
ATTGGCCCCGACACACCGCGTCAACTCGCCGAGTACTTTTCGGCGGCACG
CTCACGTATATGCTAAGCTCGATTACTTTCCGAGCTGTTGCCGCGAAGAC
TTCCGGCGAAACGTCGCAAGTTTGCACGTACGTATGTAGCTAGCCTTAGC
TTTCCTAGCTGGTAGCTCACAACGCACGGACACAAATCGCAGGAACTCGA
TTGATTGCAATACGCACGTGTCGTGCGTCTTTTCTTTATTTGCTCTCAAT
GACTCGGTTTATTACACGGGACTCTTACATGTATATATAGCAGATTAGTA
CAGCTAAACTACTAGGACTAGGAAACTAACTCCTGCACTAGTCGGGCATA
GCACAAACCTACTCGGATACACGTACGTATACGACCCCGTGTGTGCTCCG
TTTCGGTGTCGAACGTGCTTAATGCTAACAAGGAAAACGCCACCCCGCCG
TCTGGAGCTCGCGGCGCCTGCACCCCGCGCCGCCGCGCTCCTCTCGCTGG
AGATGGAGGCCACTCGCCATGGATGCCGCCCAGGGTGTCCCGCTGCTCGG
CATCCACCCCGCACCAGCCCCCGCCTGCCGCTAGAGATGGAGGCCACCCG
CCATGACCGCCGCCCCAGGGAGCCATGCTGCTCCGTCCCTACCGTGTCGC
GCCTTCCTAGAAAGTGCGACGCTGTTGTGCTGCCATATGCGACCTCTGGC
CGGGCGTGTGGTTGCCCCTGTCGATGAGGACGGCCGTCTCCCGACGGGTT
TGCTACATGCGGTCGCCAGCATTGCTATCAAGGCCACTTACGTTGCTACG
TACGGCGTCACATTTGCTACATACGGTCGACGGTGGTGCGAGCTTTGCTA
CTAGGGGTCTGCGGCAGTGCTACATGCATGCATTGTTTTTTTCTACAAAC
AGTGCGAAGCCCTGCTACAGGGGCACAACGGCCTTGCTACAGAGGGCACG
GTGACGTCTTCTCTAGCGACAGAGCCATTTTGCTACAATTGTTATTCTTT
TTTGCTACAACCGTTTTATGAATTTGCTATAACAGCCCAAAGTTTTTGCT
ACATAGTCTCCGACGAGGTCTCCGGCGACGTCGGTTTTGCTACATTGGGA
TTTTTTTGCTACTAAGACTCCGGCGAGGTCTCCAGTGAGGTCTAGTCTTT
TTGTTCTATTTTCTGAGTCGGATCCTTTTTGCTACAGTAACAACGGGGCT
TAATGTAGCAATAGCGACATTTAGGCCTTTTTTAGAGACACATGGCACCG
GGGGGATTTGGGGGAATTATCCCCCGAGGGACGCGTAGTACCTTTCCTTT
TTCTTCCTTTTATTTTTTGCCGCAATTGATCCACCGGTACTTGTTGGCTG
CTGCCCTTGGTGCAACGACGGTTGTACGGATGGGCGCCAGATCATACGAA
TATTGAGGGCCACCTTGTTTGTTTAAGAAAAACATCACCTAAACCTCTTT
AGCAAGTTGTAATATATTTGCTAGCAATATGTAACATATGATATTTTTTT
TACAGATATTGATGAATGCGAAATACCACACTACTGCAATGGGACATGTC
AAAATTTTCCTGGAAACTACACATGCACGAGTTGCCCCCATAGAAAAGAG
TTTGATCAAATTAAAAGGCAGTGTGTTATGTCAGCAAAGCAACACGGTCT
TATTTTGGGTAAGTCCTAGCTAGCAATAGCAAAAATATCCTCATTGAAAT
TAACTTAACCAAATACAGAGTGACTCAGAGACCAATTAGTAAATGTAGGT
ATCGCAACTGGAACTGGATGTGGCCTTGGCTCCATATTTATTGCAGTCTG
TGCAATTGTACTAGCCAACAAGTGGAAGAAAGGCATCCAAAAGAGAATCC
GACGAGCACACTTCAAGAAAAACCAAGGCCTACTACTGGAGCAACTGATC
TCGGATGAAAGCGCCACAAACAAAACAAAGATATTCTCCTTGCAGGAACT
AGAGAAGGCAACCAACAACTTCGATGTCACTCGAGTTCTTGGTCGTGGAG
GACATGGTACTGTTTATAAAGGGATTCTATCTGACCAACGGGTGGTGGCT
ATTAAAAAATCCAAAATTGTGGAGCAAACTGAGATAGACCAGTTCATCAA
TGAGGTTGCTATCTTGTCTCAGATAATTCATCTCAATGTGGTAAAGCTAT
TTGGTTGTTGCCTTGAATCTGAGGTGCCTTTGCTGGTGTACGAGTTCATA
TCTAATGGTACACTACATGACCTTCTTCACATAGACGTTAGTGTTAAATG
CTTGTTGTCATGGGATGATCGCATTAGGATTGCAGTAGAAGCAGCAGGGG
CACTTGCTTATCTGCACTCGGCTGCAGCAATCCCAATTTTCCATAGAGAT
GTGAAATCTGCTAACATACTTTTGGATGGCAGCTTTGCTACAAAGATTTC
TGACTTTGGTGCTTCAAGGTCTGTTTCACTCGACGAAACTCATGTGGTGA
CTATTGTCCAAGGAACATTTGGCTACCTAGATCCAGAGTATTACCATACT
GGGCAGTTAACTGAAAAGAGTGATGTGTACAGTTTTGGAGTAATACTAGT
TGAACTTTTGACAAGGAAAAAGCCATTTTTTATCAATGATCTAGGTGGAA
AACAAAACTTGTCCCATTATTTCATTGAAGGATTGCAAGAGGGAGTTGTC
ATGGAAATAATGGATCCTCAGGTTGTCAAAGAGTCAAACAAAGAAGAGAT
TGATGATATTTGCTCACTTATAGAAGCATGCTTGAGACTCAAAGGAAGAG
CTAGGCCTACTATGAAAGAAGTAGATATGAGGTTGCAAGTGTTGAGAACT
AAGAGGATAAGAAAATGCGGAACTCCCCCAGCTAGTGATGAAGAGATTGA
GCATCTTTTGTGCCCAAAGGTTGGTAATTCCGATGCACCGATGGATATTG
TCAATGCTGGTTATTTAACATCAAAAGGCATCTCCAGTTGCTATAGGCTA
GAGCAAGAGCTTTCATCCTCACTGACTATGCCACGCTAATATATATGTTC
AATACAACAAGCGCGCCCTACCTATTATTCATTTGGATTACCATTTATTT
TGTATGGAGTTGTATTATGTTACATAGTTCACCTTAGGCGAGAGTATGTC
ATATAGTTCAACTTCTTGTGTATTTGAATAATTTATTTGTGGCCCATGTG
AATTGTGTACAAATATAATGTAATTATTTGCGACAAATATGCTTGTAATT
AATAACTTCAGATACATCACTGAATTTAAGTTAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.