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GrainGenes Sequence Report: AE003008

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Sequence
AE003008
Germplasm
BYU132 (oat)
Species
Avena erithiana
Probe
AE003008
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GTGGCGACGAAGTGCTGACGTGTGGGGCCCGCGAATAAGGCGAGAAGAGA
GGAAAGGAGAAGGGGAAGAAGTGTGTGTGTCGGCGCGGCGCAGCAATGGC
GGACAAGCCGAGCCGCGCGCTGGTGCTCTACGCCGCAGGCCACGCGGCGC
TGCTCCCCCGGCCGGCGGCCGGCGGTGAGGGGAAGAGCCACCTCGACGCC
TTCGCATCCCTTGCCTCATGCGGCTTCCTCTCCCTCCGCACCCCCAACAC
CGTCAACGGTTCTGATCTCTCTCCCTTCTCCCGCTCCGCTAGGTCGTTTC
CCCACTTAAACCGAGAGGTTTCTGGTTTTATTGCTCAATCTAGATGGCGA
TGGAGGAGATAAGAACAGCGACACGATTCTTGAGCTGGCGCAGCTGCTTG
ACGTGTACGATGGCCTCTACCCTGCCAAGGTGCGATAGATTCTGCTTTCT
TTCCCGGTCTTGCATCAAGATCAAGGATTTGGTGTGTGGTGCTGAATGTG
TTTGTCACACGTTAGGATGCGGGAGCTGCCCAGGTGGATCCGCAGGACCT
AGTCGTTCCCAAGCTATCCGAGAGGTTCGTGTTATAATCTACTTTACATC
TACTAGTCTAGATCTTTCGGTAGCATCTGCTCTAGCGCTAACTGTTGCAT
CTGAGAGAGAGAGAGAGATTCACCTGCGCCCTGGCTCGACAAGCACGAGC
CAGAGGGGATGCCGGAGCTGGTCCCGGAGCTGGAGCCGCCGTCGTTAGCC
ATGGGAAAAAGGTCGACGGCGTGGGTGTGCGGTGGTGGCGGCGCTTGCCG
TCGGCTCACGCTAAAACCCTAGATCGGTAGGGGTGTAGGTGGGGTGACTA
GAGCAGCGGCGTTCCTCGTGTGCCGTGCTGCCGGTCCCCCACCACTTTAT
ATAGCGCGGCGACAGGGGCCCACCAACCATGATAAGGTTGAGCGCCCCCG
ATCAGGGCGTGGATAAGGAGCTCGTTCGGGCCGTTGGGCTCGAACGGGAG
AGATCAAACTAACATTCTCCCCCTTGATCTCGACTTTACTTTTAACTTTG
TACTTTACTCGTTTCATCACAGATCGATACATAGAGCATGTTTCATCGTC
TCAGCTCAATTGCCGATAGAATCAGACAGCTACTACATACTTTTCTATTT
TGAAACAAATCCTTTTACTTTTAGGCCTCTGTAGTCCAGGAATCATAGGC
TTTCCATTAATCCCATACCGGCTATGTGTTCCTTGAACACATTGGGTGGT
AAGCCTTTCGTTAGCGGATCCGCAAGCATATCCTTTGTCCTTATATGCTC
GAGTCTTATAGTTTGATCCTGGACTTTGTCCTTCACAACATAATGCTTTA
TATCTATTGACTTTGTAGCATTACTCGACTTGTTGTTGTGAGCATAGAAT
GCTGCGGGCTCGTTGTCACAGTACATCTTTAGTGGCCTGCTGATGCAGTC
TACCACTCTCAAGTCGGGTAGAAATTTCTTTAACCATAACGCCTGTCCCA
TGGCCTCATAACATGCTATAAATTCTGCATACATCGTAGATGACGCAACT
ATCGACTATTTGGCGCTTCTCCATGAAATAGCACCTCCTGCGAGAGTAAA
GACATATCCTGTCGTGGACTTTCTGTCGTCTTTATCTCCCGCAAAATCCG
CATCTGAGTACCCTTTTATCTCCAGGGAATCAGATCTTTTATATGTTAGC
ATGAGGCCTTTTGTGCCTTGCACATAACGCAAAGCTTTCTTTACCATCTT
CCAGTGCTCTATGCCTGGATTCTCTTGATATCTGCCGAGTACCCCGATGA
TAAAAGCTAAGTCAGGGGGAGTGCACACTTGTGCATACTATAAGCTTCCA
ACAGCCGAAGCATATGGTACTGACTTCATTTGATCGATCTCATACTGGTT
CTTTGGACATTGGGATTTCCCAAAACTATCGCCCTTGACTATGGGAGCAG
GTGGTGCATTACTCGCATGCATATTGTATTTCTTTAGAATCTTTTCACAA
TATGCTTTCTGCGACAGTCCTAACACTCCATTCTTTCTGTCTCGGTGAAT
TTCTATGCCCAAAACATAAGAAGCTTCACCAAGGTCTTTCATGTCAAAAT
TTGAAGACAAGAACTTCTTTGTTTCTAGTAGTAGACTGACATCACTGCTA
GCAAGCAAGATGTCATCCACATACAGAATTAGGAAAATATATTTCCCACT
TTTAAACTTTGCATAAATGCAGTTGTCCTCAACATTCTCTTTGAATCCAA
ATCTTTTAATTGTATCATTGAACTTTAAATACCACTGCCTAGAGGCTTGC
TTTAACCCGTAAATGGATTTCTTTAGGCGGCATCCCATATGTTCCTTCCC
CTCCATGAAAAAACCCTTGGGTTGTTTCATGTAAACATTTTCATCTAAAT
CTCCATTTAGAAATGCCGTCTTAACATCCATTTGATGTAACTCTAGATCA
AAATGTGCAACTAGTGCCATTATGATTCTGAAGGAATCCTTACATGAGAC
TGGGGAAAAAGTCTCATTGTAATCTACCCCTTCTCTTTGCGTAAAGCCTT
TTGCCACAAGTCTAGCTTTGTACTTTTCTACATTCCCATTGGAGTCATAC
TTTGTCTTGTAGACCCATTTGCATCCTACTGTTTTGGCTCCTTTAGGAAT
TTCCTCCAAGTCCCAAACATTGTTGGAACTCATCGATTTCATTTCATCTT
CCATTGCCTCCACCCACTTGGCTGAGTGAGGGCTTCTCATGGCTTCTTCA
TATGAGGTAGGATCGCCCTCCATATGAACTGTTTCTGTGTTGTAGACTTT
GTAAATTTCTTTGGAAATGGCTGGTCTTCGTTCTCTTTTAGACCTTCTGA
GTTCATCAGACTCTTGTTCATTTCTTGCCTCGGGTTCTGGCACATTGTTT
ATATGTGGCTGTTCTGGCTCCGTTTCGTGCTCAACAGTGGGTTCAGGTGG
CTCCTGACGGACAGTTCCGAACCTTCTCCCATTGTTGTCACGTGTGGAGT
CACAACAGGTGCCGGCACCACAACCTCAGGGGTTGTAGATGGTGGCACAA
CAGGTAGCGAGAAAAATGGCTCCTGAGTCATCGGATTAGGTGCATGCACC
CTCTTCTCCTCAAGATCAATTTCCCGAGCTACCGTGCTCCCCCTCATCAA
TTTGTCCTCCAAGAAGACTGCATGTCTCGTTTCTAGAAACTTTGTGTATC
TGTCAGGACAGTAGAAACGATAACCTTTTGATCTATCTGGATAGCCAATG
AAGTGGCAAGACACTGTTTTGGGGTCTAACTTTGCAATGTTTGGATTGAA
AACTTTTGCCTTAGCTGGGCTCCCCCAGACCCGCAAGTGATGCAGAGAGG
GGACTCTGTCTGTCCACAATTCGTACGGTGTTTTGGGCACCAACTTACTT
GGTACTCTGTTGAGAATGTGAATGGCGGTTTTAAGCGCCTCCATCCACAA
TCCCAATGGGAGGGTGGAATAGCTCATCATGCTGCGCACCATATCCATAA
GGGTACGGTTGCGCCTTTCAGCTACTCCATTTTGCTGAGGTTCGCCCGGC
ATAGAATACTGGGCGACTATTCCATTTTCTTGTAGGAACCTTGCAAAAGG
TCCTGGTACTTGACCATATGGAGTATGCCGACCGTAGTACTCCCCCCCAC
GGTCAGACCGAACTATCTTAATTCTTTTATCATGCTGATTTTCAACTTCA
GCTTTGAAAATTTTAAACTTATCCAATGCTTCAGATCTTTCTTTGATTGG
ATAAATGTAACCATACCGGGAGTGATCGTCCGTGAATGTTATGAATGAAT
CATAGCCATCCACACTTTTCACCGGAAACGGTCCACAAATATCAGTGTGG
ATTATTTCTAGTGTAGCTATACTTCGGTTTGCACCCTTTTTAATCTTCTT
TACATACTTTCCTTTGATGCAATCTATGCATTGCTCGATGTCTGAGAACT
CTAACGGAGGAAGAATGTCATTTTTAACGAGGCTTTCTATTCTTCCCCTC
GAAATATGGCCTAATCTACAGTGCCACAACTTCGATGAGTCAAGAGTTCT
CTTTCTTTTCTTTTGTTCTTTGTTCGACAAGGGAACTTGTTCGTTCACAT
CACACATAGAAAACACTTTCTCATGCAAGGATAATAAATAAAGCTTGTCA
TGTAGTGAAGCAACACACACACAAGTATCTTTCAACCAAATGGCACATTT
GCCATGTCCAAAATAACACTCATACATGTCTTTGTCCAGGCACGACACAC
TTATTAAGTTTCTATGGATGGAAGGAACAAATAAAACATCCTTAAGCAGA
ATAGTAGAGCCATCAGCTAGCTGCAGAGGAATGTCGCCAACAACCTCCAC
TTCTGCTTGGACCCCATTAGCCACCTCAATGTGTCTTTCTCTTCTTGGCA
AAGTCCTTGTCGAACGGAACCCCTGTAAAGAGTTGGCAACATGAACGGTT
GCACCAGAGTCAATCCACCAAGTAGATTTAGAAACGTTTTCATACAAGGA
TTCATTTACAAAAGATACTATGTCTTTACCTTTCTTTGCCATTATGGTCT
TAAACCATAAATGGCAATCCTTCTTGAAGTGACTAGGCTTTTTGCAATGG
TGACAAAGGTCCTTGTTCCCAGGGAGAGACTGTTGATGCTGATGCTGGTG
TTGTAGGGGGCCCTTTCCATGTGGCTTGGAAGGGGAGCCACCATGGTTGC
TGTTGGTGAAGTGCCTCTTCCTGTTGTCCTTCACGTAGTTCAAGGAACCA
CCGTGAATGGACTTAAGCCTTTCTTCCTCTTGAGAACACATCCCTATGGT
CTTTTCAATGTCCCATTTTTCAGGGGACATGTTATAGTTGATCACGACAT
TCTCGAACTGTTGGGGAAGAGAGGCCATGACAAGATGCACCAGTAGAGCA
GGCTTGAGCTCGAGGTCCGCATCCATGGGCTTTAACTTAGCCGCCATGTT
GGACATCCTCAAGATGTGCTCTCTAATGCCATGTGGCCCTCTCGTATACT
TTTCTGTCACCAGCTGTTTTAGCAGCTGGGTCGCATACATCTTTGAAGAG
CCAGTTACTGGCTCTTTATCTTTGCAAGGTACCAACCGAGGCACACTCTT
CAATTGAGCCCACTATTGCATTTTCAATCGTGTTTTTGACAAAAGCCAAG
CACTTCTTGTTTGCATTGACCCACTTTTGGTTGTCTATTGAGTAGGCCAG
CTCCAAAGGAGTATGGTCTCTCTTTCTCTTTTCCCATGCAACACTTTCCT
CAGCATCACCCCTCACTGGGTCCTCAGGCTTGACTGGCTGTTTAGTATCA
ACAACCCAGTCTACTTCTGCGCAGACAAAAGCCAAGTCAACCTTTTTCCT
CCATTCTGAATAGTTATCCCCTCTGAGCAGTGGGATATCCTTCAGGCAGC
TCATGAGGTTGAGACCTCCTGAAAACCACAAAAGATGTGAGATAACCAGA
AACAACTGTATGCATTAATCCAACGTTGGTATAAATTAAGCATGCAATTG
TTTGTGCCATTTAAAATTATATCACCGTTGGGTAAAGATAAAATTAAATG
CACCTTTAATACATAATAAAAGGGATCATGATCATGTTTATTAATAACGT
TGGTCAATTAATAACATGAAGCACAATCAGCTTTAAAGCATTTAATCACA
TCTTTTTAAACAAAATTTAATACACTATTGCATTCTAGCAATTTAAAACA
ACTAGATTTTCATGCATTCTATCACTAATCACATTCATGCTATTTACAAC
GTTGGTCAGAAAAATAACATGAATATGACCAGAATATAACTTTAACATGC
TCTCAAAAAATTTAATATCACTTTTGTCTTTATTAAATTTTAAAAGAGCA
CATTCAACTATTTGCAGCGGAAGAATGAATTAAAATTCATTAACTTTAAC
CTTTACAGAAACCATTTACTATTACTTTAGTATTTTCTAGACAAAATTTC
GTTGGATAATATTGTATAGAAAAAACTAGACGAAAATTGTCAAAAAACTG
TACAAGAAACGTCCAAAAACAACTTCTGTAAAATAAAACAGAAAAAAAAA
GGAAAAACTGGGCGAAAACATCGGCCCACTCTCTCTCTCTGTGCGGCATG
TTACTCTCCCTCGGCCCCCAACGGCCCACGGCTGTCCGGCCTGCAGAGCC
GCGGCGGCCCATCAGCCCAGCGCCGTCCGCCCCGCCCGATCGTGGCCGTC
CATCCGATTCGACAGACGCGCGTGCGTTTCGGCTGGGATAAAACCAGCCC
CCCGGTCGCCCCCCGGAACCCTAGCCTCACTTCTCACCCCCGTGCCTGTC
TGTCTCGTTCTCTGGCGGCGGCGCCGCTCTCTGCGAGCGAGGCGAGGCGG
CCGCGCAGCCCGGCGCACCGCCGGCGGCGAGCCCCTCCCTCTCTCCAGAG
GCGAGCCCGTCCCCCTTCTGTCCGCAGCAGCGGTGGCGCCTAGCCCCGCG
CGCGTTGAGCAGCGGTCACCCCGGCTGCTTTCTCTCTGGCGGCGCTGGAG
AGGCGAGGTGGCCGTCCGTCCGGCGCCGGCGCCGGCGACGGTCCCCTCTC
TTTCCTACGCCACCACCCCTTTCTCCTTTCCCTCTGTCCAGAACCCCCCA
CCCCGCGAGCAACCAGCCAGAGAGGAGTGAGCAGCTGCTTTCGCCCAACG
CGCCTCCCCTTGTCCCCTTGCCGACGCGTGCATCCACCCGAGGGTGGGTG
CACCGCCGTCAAGTGGCCGAGGTGGGGCAGATCCTTTCCCGGCGGTGGCC
GGAGCGACTTTTCTTTCGATTTGGGTGGGGATTTGCATGCGGGGTCTGGG
AGAAACTAGGGTTAGGGTTCAAACTTTTCGATCTACTTTTCTTGGGGCTT
TGATTTGCTTTTTGGATGGAAAAACCGGGGCTTTGATTTGCTTTTCTTTG
CCCCGTTAGGGGTTTGTTCTTCTTCCCGACCTCGGCTTGCCGATGCGTCG
GGATCGAGTGGAACGGCGCGGCCGTGTGGGCGGCACACTTTGCCCTTTTA
GGGTTAGCCTTGGTATTCCCTTTCTTTTGCACCGAAAAAACTAGAACTAG
TGGCTCTGATACCAATGTTATAATCTACTTTACATCTACTAGTCTAGATC
TTTCGGTAGCATCTGCTCTAGCGCTAACTGTTGCATCTGAGAGAGAGAGA
GAGATTCACCTGCGCCCTGGCTCGACAAGCACGAGCCAGAGGGGATGCCG
GAGCTGGTCCCGGAGCTGGAGCCGCCGTCGTTAGCCATGGGAAAAAGGTC
GACGGCGTGGGTGTGCGGTGGTGGCGGCGCTTGCCGTCGGCTCACGCTAA
AACCCTAGATCGGTAGGGGTGTAGGTGGGGTGACTAGAGCAGCGGCGTTC
CTCGTGTGCCGTGCTGCCGGTCCCCCACCACTTTATATAGCGCGGCGACA
GGGCCCACCAACCATGATAAGGTTGGGCGCCCCCGATCAGGGCGCGGATA
AGGAGCTCGTTCGGGCCGTTGGGCTCGAACGGGAGAGATCAAACTAACAG
TTCGATGTGTGTCATCTTGTTGCGTTAAGAATTGTTACCCTTCCATTTTG
ACTGTGAGAGCTAAATTGCTGCTGAAAATTCAGGTTTATGGGGCTCAGAG
CTGCTATGGTCACCAATTGCCCCGGCGTCAGTTCATTCGCGGCGAATCTT
GGTTTCAGTGTCTTCGGAAGTGAAGATTTTGCCATGCAGTCTGGTTCAGA
CAGCAGCTCTAAGGACACCAGAATAATCAACCGTGCGTTCGGTCTGCTGG
GATTCTCAGAGGGGATTGTCCAGGATTCATCTGAATTCGATCTAGTGTTT
GTTCACGTTGCTATGGAGAACACAGCCAGCAAGCTGGGGAAATTAGGAAT
GAAGACGGATCTCAACCGGCTTGACAAGTTGGTGGCTGTGGTTATGGAAG
CTGCTCCGCTCGGTTCAGCTATCGCCACCCGAATCCATGTCTCTGTCATC
TGTAGCTATGGATCTGCTACTGAAAAGAAGGAAGAGTCCTGTCTCATCTT
GAACTCGTCAACCGAAACTGATTCTGACTTGAAGCTGCTTCGTCCGCGCC
AGAGCTACACTATGAAAGCAGGAAAGACCTTGGATGATGTCAGGTAAATA
TTGTTCTTGGCTAGCAAATAAAATTCCTAACAGATGTTTTTGAAAGGCAG
TGTGGTGTCTTCTATAATATGCATTCTTTATTGAACGGGAAAAGCGCATT
GAATGCGTTAAATGTGAAGTGAGTCATATCATGGCCTTCCAAGTTCCTAG
TATAACTTCATATCGTCCTATCAATATTTGCTCATACAAAAGGACTGTGC
AATGGCTTACATCACAATTCACAACCATTAGAAACTCATATAATAGACAA
CCTTTAGTTTTAGGAATTCAAGTTGAAAAATGCCAATATAAATATATAAT
GGATGGATGCAGAACTGAGGGACTTTCCAGTGGATGCTACATTCAGGCAT
TCAGTCAACTACCCTGGTTTTATTATTTGAATAGCATTAGTCATCCTCAA
CCATGGCGGTATATATATAGTGGTAAATAAAAGTACATACACGGACAATG
ACGCGTCTAGACTTGCACCGATATCCTAATTATGCATTTTGTGCAGGAAT
CATCATCCAATTCTTCTGGCGCAGTGGCAGGAAGGAGTGACGCGTTCTGA
TTTGGCCAAAGAGTTCTCTTTTGAAGAATTTATAAAGGTCTGCTTAATCC
ACTTTGTTATATTGTTTACCACTTTACCTGAATCAGAAACCTTTTATCAA
ATACTACATATGCAAGTCTGTTCCTGTGATAATGTTCATTACCCTGTTCC
TCCAGTTGATTTAGAATCCGACATAAACACTGTAGTTCTCCCTTTTTCTA
TTCTTTCTACTGGTGCCAGCATTAGAAACATGAGAGTACTCCCTTTTTCC
CAAGACCAACTTTCTGGATTTAATAAGCCATGTAGTTTGATACTGATTCC
TCGGGTATTATAGACAGTCTCTGTAATAATAGTTACTAGAAAAAAACGAC
ATCTTGTAGTGAAGGGTGATAAACTGTATTTGGTGCACCTTTTCTTTGCT
ACATACTGAGGTCCGTGGTTTGTGATACATGTGTAAGCTATTGCATAGGA
ATAACCAGCACTATCAGTTGGGCTTTTGTTGTATAGCTGCACCTAAGAGC
TTAATATCTAGGTATGCACCATAAATTAATTACTCATTTTCACGGATTTC
CTTGGTCAAACATCTACTTACACTTGGTTGACACACCTTTCATGACAAGA
TAGGGTTATAAATAAAAAAACCTAGTGTGGTGGAGGTGTCCATCTTTATA
GGATGCCTGTGTTCCACATACCAGAATGAGTATGCTCCACAGCAATAAAG
CATAGTAGCTTTTTATTCCTGTAAAGTATAAACCAAAGAAAAACTGAGAT
ACAGCAGGCAGGATTGGCACTTGTTTACAGTGTTGTTATGACTTCAACGT
TCCACTGCTTCCCCATACGTGTGGTCTCAACTGGTTATGATTCAATATCT
GTTACGTTTCAGTATGTGTTCTCTTGGTTATCTGACTTCATTTCGTAATG
TAATGAACAGCGCGCCGGAAACTTTGCTATGCTTGCGGAGCGCTTTCTGC
ACGAGGTTGCATTTAAGCTCTGGAAAGCACCGAAATACGGAGCTTAGTTC
TGTGTGAGGAGGTTTTCTCTTATCATGGTGTGGAATCAGCATAATAGAAC
GGGTGCTAGATGAGTACTTGTTTCAAATGGGTACTGCGCAAGTCCAGATA
TTGCAAATAAATTAGTTTTGTACCTTCGTAAGGCCCTTGTTTGGTTCCAC
CCATGCTCCATGCCTCAAGATACCGAGGACTCGTAGGCATCATTACTAGT
TACTCACTTCGTGGAGGATGTGTTGCAAGCTTCCCTAACGATTTTCATTG
CGGAGCTTTTGTGAAAAGTGAAATCCTTCGCTTGAAATTTCCTGGTGAAG
CAGGTGTTTCTGCTTCGAGCTCGGTATCGGACTTATAACATGTGCCGACC
CCTGTAATGCCGATCATATTCCTGCAAACGATGACTCGCAGGAGCATCAG
TTTTAATAAGAACAAATACTGGAATAGGGTTTCTGATAGAATGATGGTGC
ATCATTTGTTTTTGGGTCGACGGCAGTACTGAGCACCGGTTTCTTCGCAG
CTTCAGGTCTAAGCTTTTCTCAGCCCTTTGTGCAAACTCAGAATTAGAGC
AAAAGGGTCTACGAGATTAAACAGGATTAACAAAGGCGTAGAGCAAACAT
CCATCCCGCATCCTGCCCTAGCCGCGTGGAAATTCTTGTGTGAAGTATAT
ATATGCAACTTGCGGAAGTGTAAGTATCCATGTGGTGGAAAAACATATTG
TGATCTGTGTGTGTTTGGTCATGTTTTCATTCTATTGGTTGGGAAATGAG
AATGGTTATCCTGTGATTCGAGCTTATTCCCATACTAGTGTGTTCTGAAT
CTTGTGAATCAAATAAAGCCATGAATGAGTTAGACTCACGGCAATGACGA
GAAAAGACACTGTTTATAGTATCATGAGAAATAACTAACAAAGATTATCA
TGTTTCTTTTATTTTT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.