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GrainGenes Sequence Report: AA011517

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Sequence
AA011517
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA011517
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CGCAGATCTGCGTCCAGCAAACAGTAAGCCTGACAGGGAAAGGTCTCCTC
GTTTTCCTCCTCGCAGGAAATGATCCTTTTATATCAAAACCTCAAGGAAA
AAGCTCTTGTCCTCTCAAGCACTTCTTCAAGCTTTCAGGTACGTACTACT
TCTTCTTTTTCCTCACCTCATCGATCTTGCGTGGCAGTCTCCACCTGCTC
TATCGGTTACTCATTAATCTGCTCCTTAATCCGTCCGCTCGACAAAGAAC
AAACTGAAGATCGCGTTTCGCGGACGTGTACTTCCTCGCTTGGCTTTTTA
ATCCGTTCGGTGTTAATATGATCCTCCTTTCTAAGCGCTACCTAAAGTAC
TTTTCTGGTGCTTCGTATGTTTCCTCACGTTTCTCGCTAATCTTACTTTA
CTTTTCTTGGTGTACAAAAGGGAGCATCCGTCGCCGTGGCAGAGTAGAGT
AGAACAGACGGATGGAAGGCTTCATCACGGAGGCTGAGCGGGAGAAACAG
CTGCCTCTTCTCCCTCTCCTCCGTGGCATACCATCGTCGCCGGTCAGTTC
ATACTTCTCAGTATATTAGGAAGACATAAGACGGTTGTGAATGGTTTCAG
AGTAGTAGTTACGAACCTAACTAAGTTTCTCAAACCTTTAGATTCTTGTG
GGTTCGACACTCTTTGGTGCTATAACTAGGCTCTGCACTTGGGTGTTAGC
ATCCCACACTGGATAATAGTATGAAAAAATTCGGTGGCTTCGACACGTAT
TTTTTCCTCTAAGTTGATATTTTTTCACGTAAAAATTGGTATATCTGTGT
GGAAAACTGTTAGGTGAGACAATGTCTTAGTCCAGGTGAGAACTTATCTC
AACGATAGACAATGTCTGAGGTTGAGTCCGGTTTGAGAAGTGCGCTGTAG
CTCAATATATGCTGGTGCAGTGGCCGATCTAGAACTCAATGAAGCACCAT
GCATAAGCATAAATACACAGGAAACAACCCAATACAACCCTAGTTGCTTG
AGGCCTAGATCCACCCCTTTTGATGTACTCCCTCTGATTTAAAATATAAA
ATGTTTTAGCTTTGTAAAGCAAATGTATCTAGATTACTTTTAGTATGTAG
GTTCGCTCAAATTTGGAGTGAATCTACACACTAAAATAAGTCTAGATATA
TTTTCTTCACAAATCTAAAACATCTTATATTTTAAAACAGATGGAGTATA
TGTTTTTTTTTCACGAAGATCAATGGTCCGTTGATTTTTTTCTTTGAGAA
AGTAACCGTGTTTGTTTTTTAAAAATAAAACAAGAGTACAACGGCACGAC
ACACAGGAATACAGGCAGAAGAAGCGAGAAAGGACACGTGTCTAGGAACA
TATGCAGAAAAAAAAACCATAACAGAGAATAATATATATATATATATAAG
GGCTTTGAGGTTCCTGAAAAATCCGCATCAGGAGCGCCACCGCTGCCACA
CCGTTCCCGGTCGGAATCCTAGCCGCAGATCCGACAGCCCACGCTGCGAA
GAGCATCGTGTTCTGACGGGATCTGGAAGCAATTTATTGAAAGCCGCCAC
CCTCGTCACCGGACAGAAAGAGTCCGGCAAACCCTAGATACAAAGACTAA
ACCTGGTCTACAACTATACAAATCCGAGCGGGCGCATCCAACGAACCTCC
TCCCGCCGATGAGCCCAAGGCCCATAGGGAAAGAGATGTGCCGGAGCCAC
CGCCGGAAGAACAGTCGCCTCCCAGTTCGCCTTTCTCTGCGAATAAAAGT
GAGAGAAAGGAGAGTCCTTTGGTCGATCACCTTGCTGCACGGAGCGCCCG
CAATGATTTGTTACAGAATGATGTTAGAGCTATACATTGTTCTAGCTGCA
TATTTTAGATCATGTTAATTATGTGCTAATCTCTTACCCCTTTCGTCTAG
AAATAACTGACTTAAATTTATTAAGATTCATTCATATCTAGACGCATTTT
AACGTGTAGATACATATAAATCTAGATAAAATTAAATTATTTATATTTAT
GTTTGGACAGAGAAGTATTAGAGAGGAATGGGTTATCCCATTGATTTCTA
GAGACAGCCAGCCATCCTCCCGGTCCTAATGGAAGCGTGGGACACATTAA
GTGCTTGTTTGATTCATAGGATAGGAAAAGTATAGGAATAGAAAAAACAT
AGGATTGAGATGTCATGCCAATGTGAATCCTATAGGAAGAGGGATTTTGT
TTGATGTGGTAAAGGAATTTTTCCATGAGGTGTGACCTAATGTTGTTTTC
CTATAGGAATTGCACTACAAGATTCCTATAGGATTAATTCCTATGGGATG
TGTTCCTATGAATCAAACACTAACATAGGAAAAATTCTCATAGGATTCAA
ATCCTACATAATTACTATGCAATTCCTATGAATCAAACAAGCCCTAATAG
TAGTACTCCTATATTTTTTTCCTTTTTGAGGAACAGAATCGTACGTAGAC
TGCCTCGTGACTTTGATATCCGAAACAAATCAAGTACATTAGTACAGTAC
TCACTAGGATCTTGTATCCTGACTCGAGCCGTTAGACACATTTGTTTCCA
GTCTGGCCTCGTGACTTTGACATCCGAAACAAATCATGTACAGTACTCAG
CAAGATCTTGTATCTCTGACACGAGATTAGTTATATAGTCCCCTGGATCT
TGTATCCCTGACACGAGGTTATTTTCTAGTGATCTTGATCACAACCGCCT
TCTTGCTACCCTGGAAAACTAGCAAGACCACCTTCTGCCAGCGCGCGGCT
ACTCGGATCGCCATCTACTTCTTGCAACCGAAAGAAAAAATAAATATATA
AATAAATAAATAAATACGTGGCCCCGCATTTTTGATGATTTTTCTGTGAT
TGCCGGCTAATCGGGTGCAGATCTTCGCCTCACAAACAGTAACCCCTCCT
TGAGAGTTGAGCCTGATAGTGAAAGCTCTACGTATTTCACGTGCTCTCTT
CGTTTCCTCGTCGCAAACATCAAGGAAGAAGCTCGCATCCTCCTCTCAGG
CACACTTCTTCAAGCTTCCAGCAGGTACGTACTTCCTTTGCTTCCTCACC
TCATTGATCTTGTGTGGCAATCTCCACCTGCTCGATCTATCGGTTACTCA
TTGGCTCCTTAATCGGCTCGACCAAGGACAAACCGAAGATCCGCCTTTTC
GTGGATGTGTACTCGCTCGCGCTGGCTCGCCTTCTTTAATAACTGAGCGA
TAATATGATCCTCCTTTCTGATATGAGCGATAATAACTGAAGTGTACTTT
TCTGGTGCTTCGTATGTTTCCCTGCTCCGGACTCTCGCTAATCTCTTACT
TTTCTTCTCGGTGTACAATTAAAGGGAGCATCCGTCGCCGTGGCAGAGTA
GAGTAGAACAGACGGACGGATGGAAGGCTTCATCACGGAGGCTGAGCGGG
ACAAACAACTGCCTCTTCTCCCTCTCCTTCATGGCATACCATCGTCGCCG
GTCAGTTCCTACTCATCAGTATCTTATGGAGACATAAGACAGTTCTAAAT
GGTTTCAGAGTGATTACGAATCTAATTAAGTTTCTCTTCGCTTTAGAGTA
TATGGTTTTAAGTTTCTGTCGGTCGTTTCCGCAGTAATACTCGCTCTAAA
CCAGATGGAGATTTTGTGTCGGCATAGTCTCTAACATGCCACTTTGATGA
TTACCATTTATCTGATTCCAATATCACATATAATTTAAATTAATTTTGCA
TGCCAATTTCAAAGTTAGCATTGGTCCGAATCAAGCCAAACATAATTATT
AGTATTTTCTAAATGTCAAAGATAGGTAATTATCCTTGCCGAAAATATGG
TTGAGAATATTATCATGTACTCTCATCTTGCCTATTTTTGAACGGAGATA
GTTGTTACTGTCTCCGTTCCAAAATAAGCATCACGGTTTTAGTACAAAAT
TATACCTAAACCGCGACACTTATTTTGAAACAGAGGGAGTACTATTTGTC
TTTTGAATTTATAGTCCAATGTATGTATGGAATTCTCTATTTTGTTTTTT
GTCTGCTGTTTTTTAAATATATACTTGTTCGGTGCCATTGTTGGTGAAAT
CGAAAAGGGAGAAATGATCAGGTTTGCCAAAATTATATGGATCTGTAATA
CTCTATAAAAAATATCTATATGTTCTAATAGTATCTTTTTTTTTTATTAT
TTGCACATTGTTGGTCAAGTAATATGGTCGGAGCCGGAGGGAGTAACACT
TTTTTGCGGTGCAAAGTCTTTACGATTATTGTAGTAAAATATTTCATGAA
TGTTTAGAAGTACAAGAAGACGTCTAGAGAAGGCCGGCTCTGCCCATGTG
GAGAGTTGTGATTACCACCTTAGCAGAGCGTGTAGCACAACGTATAAAGC
TGCCTAGAGGGAAGTGCGCAAGCCGCGGCACCCGAGACCTCTGTATCTTT
CACCTCACACGATGCCGATGCCTTTTTCTTCTTCTTCCTTTTTACCTGCC
CTTTCTCTCATCGTCTCACCACTCACGTCGCTCCTGTCTCGATGCATTTG
CAGGACCATTGTACCGGCGATGGATCTGTTGATTTCAAGGGAGCGCCAGC
GTCCAGAGAGCACTCAGGGAAATGGAGAGCCTGCTGCTCCATTCTTGGTA
ATCTACTTCCACTCTCTGTTTGTTGCAATGCTCTTCCATGTACTTAGTAT
GATCAGTTCTTGGTTTTCTGATTTCTCCATGTTGCTGTAATGCCGCTCTT
GCACATATGATCAGTTCTTGGTTTTCTCATGGCATTCTTCTTGCAGGCGG
CGAGTTCTGCGGCGCTCTCGCGTACTACGCGGTCGGGACGAACCTGGTGA
GTTACCTGACCAAGGTGCAGCACCAGAGCAACGTCGAGGCGGCAAGCCGC
ATCATCTCCTGGCAGGGCACCTGTTACCTGGCGTCTCCACTCGGGGCGTT
CTTGGCAGATTCATACTGGGGGAGACACCGGGTGATTCTAATCTCCCTCA
CCATCTTCACTCTGGTAAGTGCGCTTCATCCATGATCACGTGTCTTCTCT
GCGCCAAACACTTCTGAATATTATCTATGTCATATATTTCAGGGAATGGC
TCTGCTGACGCTTTCAGCTGAAGCACCAGAAAGTATCAGTTCAATGGAGA
TCTCTCCTCGGGATGCCATGTCCTCGCTAGGCCTGTACATGGCTGCTCTG
GGCCTGGGTGGTATCTGGCCATGCGTTCCTACATTTGGAGCCGACCAATT
TGACGACACCGACGTTGCGGAAAAAGCCCAGAAGGAGCTCTACTACAACT
GGTACTACTTTGCCGTTAATGGTGGCTTCTTCTTCGCCAGCACAATCATG
GTGTGGATCCAAGACAACTGCGGCTGGGCACTCGGTTTCGGGATCCCTAC
GGTTCTTTTGGCAGTCGGCATTGCCGGATTTCTCTGTGGCACAAGACTTT
ACAGGTACCAGAAGCCCGGAGGAAGCGCGCTTACGAGGACCTGCCAGGTA
GCTGTTGCGGCAATTCGGAAGCTTCATGTGGATCTGCCCATTGACGGCCA
TCTTCTCTACGAGACTCCAGGGAAGGAGTCGGCCATTGCAGGCAGCCGGA
AGCTGATGCATACCGAAGGACTAACGTATGTTTTGTTTGCTGCACATCTC
TTTCTTCATCATCTTTTTTTTTAATCTTTTTTTTTTTGTTACATATTTTT
GGATCATCCTCTTCATATCTTCTATTCGGTCCCTTCTTTTACAAGTTCAT
CATTCCATTCAGCTTCTTTGACCGAGCTGCCGCCGTCACTACTCGTGACG
AAATAACCGACGACCTACCGAACCCATGGAGGCTCTGCACCGTGACACAG
GTGGAGGAGCTGAAGATCCTGGTGAGAATGATGCCGGTCCTCGCAACAGC
CATAATCTTCAACACCGCCGAAGCTTCATTCCCGCTATTCGTGGAACAAG
GAACGGTCATGGACAACCGCATCGTCGGTGGTTTCTCGGCTCCTCCTGCC
TCCCTGACGACATTCAACTGCGTCTGCATCCTCATGCTGGCACCGTCATA
CGACAAGTTCCTGATGCCGATGGCGAGCAGGATCACGGGCATGAAGCGTG
GCCTCTCGGAGCTACACCGCATCGGCGTCGGCATGGTCTTCGCGATGCTT
TCACTGGTACTGGCCGCCTCGGTCGAGGCCGCGCGCCTCCAAGTCGCGAG
GAGCGCAGGACTATCGCACCAGAACGTTCCAGTTCCGATGAGCATCCTCT
GGCAGGTACCGCAGTACTTCTTCGTGGGCGTGGCCAAGGTGTTCAGCGTG
GTCGGCTTCATCGAGTTCGCCTACGAGCACTCTCCCGACGCCATGAGAAG
CATGTGCCAGGCCTGCGCGCTCATCATGGTCACTCTCGGTAGCTACCTTG
TCTCCATCATGCTGAAGGTCATCAGCTCGACGACGGCCGTAGGAGGGGCA
CATGGTGGCTGGATCCCGGAGAACCTCAACGAAGGGCGCCTAGATCGCTT
CTTCTGGCTCATGGCCGGGCTGCAGTTCCTGAACCTACTTGTGTTCGTCT
ATTGCACTGGAAGATACAAGCGCAAACTGCCTAATTAATTCAGTGTAAGA
TCCTGGTCGGTTTATCCTGGTAGCTATTGTGTAATCTTTGTTATACTTGA
AACTGGAACTTATTAGGTTTGGAACTAGCTAGTTTGGGGATGTGTCCACT
ATATTTCAGGCACTTTCGACCCCTCATGTAGACATTTAGATGGATAGCTC
GTGTATGTGTTCTTTATGTGATAATGAACTTTCATACAAGGAAGTTCAGA
TTGTTTTGATCATTGCACCTCCAGAATCCTGCAAACATACGGAGGCACAT
GTAAGTCATCAAAGCTAGTATATCAATTTCCAATAAAACCGATGTAAATT
GTGTGAGTTAGTAGAATGCAAATGATACTGACAGAACTACTCCCTCGGGC
TCATATTAATGGCCTCGACTTGATACGAATACATCTAGTTTAAATACTTA
ACTAGATACATACGAATCTAGATAAAATTAAAGCCATTAATATGGACCGA
CGGGAGTATGTAAAGCATATGCATTTGCCGCTACCATATGAATATCTTTG
ATCTTTACTCTTGTTTGAGTTGGAGTTCTCAGTTGCACCCATAATTTTAC
TCATTTTGTCGCTGTACTATGTACTATCCGTACGTGGCCACAAATGCCGA
CTCCTGCATCAGTGGATGTTGACGGTCTTTCTTTTGTAAACGTAAGTTGC
TGAGAAGTAAAGGTAAGCAAGAAGCTCTAGCGCCGTGAGCGCAGCAAGGA
GCAGGTAGAAGTAGTCGAGATGCCCCCGGTTCAGGTTGTCCGCGAACCAG
CTCGTCCCGCCATCCCTCCTCGTCACGGCGTCGATGACTGAAATGAGGAA
GCTGCTGATGAAGCTGCCGACGCCGAGGACGCTCAGGTAGAGTGCGAGCC
CAAGGCTCTTGAGCTCGCCAGGCATCTGGTCGTAGAAGAATTCCTGCATG
CCGACCATGGCGAACACGTCCGCCGCGCCGAGAAGCACGTACTGCGGCAC
GATCCACCACAGGCTCATGGGGACCACCGCGTCGGGCTGGTCCACCACGC
CGGCGTCCCTCGCCGCGCTCAGTCGCCTCATCTCCACCAGCGCGGCAACC
ACGAGAGAAGCCAGTGCCAGAGCCATGCCCGTGCCGATCCGCTGGAGCAT
GGTGATGCCTGTGACCACACCGGTGATCCTGCGCGCTACGGGCACTAGGA
CGCGGTCGTAGAGCACGATGCAGATGATGACGCTCACGCCCAGGAAGCAC
TGCAGCGCGGCGGGAGGTACCTGGAACGACGACGACCCGACCCTCCTGTC
TAGTGTGGCCGCCTGCTTCGTGAACAGGGTCGGCGGCTGGGCGAACACCA
CGCCGTAGAGCAGGCACGTCGCCCATATCGGGAACAGCCTCCCCAGGCCC
CTTACGTCCTCCGCGAGCACAGCGTTCTCCGCGCACTCGCCGTGCTGTAC
CAACGCGCCATCCTCCGACGACCTCTTCCTCCAAGCCTTGAAAACTTTGC
CGACACGGGACAACGTGATGGCACCATTGTCGTCGCTCGAGTCGTAGAAC
CGGTACGTTCTCGTGCCGAGCAGGAAGACAACGAGCGCGAGCAGCATGAT
CATGCAGGGCACACCGAAACCAAGGCCCCAGCTGAAGTTGTCCTGGACGT
AGCTCATGACCGCGACGGTGACCGTCGCGCTGGCACATATCCCAAAGTAC
CACCAGTTGAAGAAGGAGCTCCGTGAAGACGACTCGCTCGGGTTCGTGGT
GTCGAACTGGTCGGCTCCGAAGGCCTGCACGCAGGGCTTGTGGCCGCTCT
GCGCGATGGCCACCAGGTAGAGAGAGACGTAGAAGAAGGCAGTCTGGAGG
GAGGATGGCGGGCATTCTCGCTGGCCGTCGGGGGAGGCGTCGCATTGCTC
AGGCGATGGGAACATGGAGGAGAGCGTTAGCATGCATAAGCCCTGCAGTT
TGACAATTTGTAACTGTGAGTTACTTGATTTTTTTCTCCTCTGAATCTAA
TCCAACTTCTGTGACCATCTGGGGATATTGATGTGGCATAAAATTCGATA
TTAGTCTGATGGATAAAAACCGTGTGAAATTCAGGCCATCCTGCAAGTTA
CAGCCTGGTGATGCAGAAAGAAGCGACAGGGACATGGTCAAGCGTACCAT
ATCGGTATTCCAGATCAAGCGAGCTTGTGAATGCAGTCACTGTCATATCA
TAACAAGTTTGAAATCGCTAAACCACTGAACATGGCTGGACGACTGTGGC
AACCACGCTTAAAAAAACAATTATAGGCTTTGACAGCTAGAGATTAATTT
GAGCAAATTATTTCCTGTTCAGCAAATGATCGAGTTTTTGAAAAAAAAAA
ACTGAAAAACTAGTTTCAAGGGGTGTATTATTTGCTCAACATATTTCCTG
AAGAAAAGGAACATGTCAAAAGTACTTACTCAGTTTAGAAATATAAGACG
TTTTAGCTTTGTAAATTGAATATATTTAAACAATTTTTAAAGCCGTCCAG
ATACATTCATTTTACAAAGCTAAAATGTCTTACTACTATATTTCTGAATG
GATGGAATACCACATAAACAGAGTTAGCCCGGGCTCACATGTTTACTCAC
TGTGAGTGTATATATCGCTGTCATTCCAAGCACTAGCTGCCGTCTCCGCT
TACTCCGGATCTGAAACATCCCTATCAACGAAATTATGGCAACTAACCGT
GGCTGCACCAACCTATGGAACACGATTCCGCGCGCCAATCTTGGGAGATT
CCTGAGACCGCAATTCGCACGCAAGAAGCGAGTGGGACTGATATTGTAGA
ACACAGTAAAAATCAGATGGTAGCTAGAGAGACAGGCCTGACCGTGAGAT
GGAGCAAGGAACAAATCAGAGTCTGCTGAGTTTAGCTATCAGGTCTGACC
GTGATGTAGAGCACGGAGGAGGCGACGATGGTACGGTACCGGCCCAGCCA
GGAGTCGGCGACGGCGGCGCCGAGCAGCGGGAGCATCGACGCGGCGCCCG
ACCACGCGTTCACGGCCGCGGCGGCGGCCGCCGTGCTCTCCCCGAGCGGG
CCGGTGAGGTAGCTGATGAGGTTGGAGGAGATGCCGTAGTACGCGAACCG
CTCCGCCACCTCCACCCCTTTTGATTTCCCCACCAAAAGTCAGAGCAAAC
AAGCAACCGAATCGAGTCGGGTAAGCAAGCTAGGAGCGAGCTCGATCAGA
GTGCCAGATCGCGGCTTACAGATTATGAACAGAGCCGACCTCCAGCCGCC
GGTGGCGCGGCGGTGGCCGGATCCGACGCGGAGGAGGGGGGCGGAGGAGC
CGGAGTCCGACTCTGGCGCCATGGCTCGCTAGCTGGCTGGGAACCGCGAT
GGTGTGAGCTGCTTGCTAATTTGACGGTGAATTGAAGAGGGTTGTTGTAC
GAGGTGTGGACCTGTAGCCGGATCTTGTCCTGATATATTTGATGGGA

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