Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA003636

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Sequence	AA003636
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA003636
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ACATTCTGGCCCTAACTATAGCCGCGGCATCTCTCCCAGTCCCTATCTCC TCGGCTTTCCTCCGTACGTCTTCCTCCACAATCCCCATCTCCGCTTCTTC CTCGTTCCGTCTCCGATGGCTCGCCTGCTAGCGCAAACCCTAGCACGCCC GACCCCAACTACCGCCACCCTCCTCCCGCTCCGCGGGATTTCCACAAAGG TCGAGTTCATCGAGATCGACCTCGCCGACGAAGATGCATCGGCCCCCGGT GCCGCTGCCGGCGGCGACGGCTCCCCGTCGGTTGAGGTTGTGGGGATCCG GCGCCTGGAAGAGGCCATCCACGGAGTGATGGTGCGCCGTTCCACCCCTG AGTGGCTCCCATTCGTGCCGGGCGGGTCGTTCTGGGTGCCCCCGATGCGA TGCCCGCACGGGGTCGCCGAGCTCGTCGGGCGGATCGCGGCGTCTGGGGT CAGCGAAGCAGGCGGAGTGTCCTATCAGGCGGAGGCCTACGTTCCTATGG CTGAGGAGGAGGAGCTCTCTCTCTCCACAGCTCGGGGCTGGCCGTCGGCC GCGTACTTCGTTGAAGGTGCGCTGGATAAGTAACCGAGGAGATCTCGTAG TTAAAGTTTCCAATCTATGGTTTCATGAAAATTGTGAACCTTGAGTAGTT CCCGTATGCGAAATCCATGTGATTGTTATGGCGGATTTGATTTAGAACGT TAACATACTTCATCCATTTTTTCATTGTATGAGGAATGGATTGTCGGATT TAAGCTATGAGTACCCCCACTTAATTGTCACATTTTCCCTATAGCCTTCC CACATTTCTCATGGTGTTTTGGAACTGTTTTTGGTTTATTGGACATATAG CATGTGATAATTATTTACCTTGCTGTTTCTGGTTGATACTCTCCACCACA TACCAAACTCTACTATTGAAGATAACTAAGTGAAATGAAAATTGTTTTCT TACCATTTCTTGTCTGGAGGATATGGCGTGTATACAAGTAGGTTTTGCTC TGTTGTATTGTATACAGGTCAATGATGTATGTAGTTCTTAGGAATGACTC TGCCTTAGGAATGAGAAACTGTGTGCTGTTTGGTTCACGGGATTGGGCAT TAGATTTTACATGATAGGATTTCACTTCCCTTGCTTTCACAGGAATATCG CAGGGTTTTAAACATTCACTCAGACCTCTTTTTATATCTCACTTTTGTAG AGCTAGTAATGTATGCACCATTTACAAAGTCAAACTCGATTGCTGCCTGT ACGGGTGAATCTAAGTTCGAAGTATTTGGAAGCAACTCAGGTAAAAAATG GGACCTAGGCGGCTATTGGGGCCGAGGCGTGGTGTTTTCGACGGTGGTTC TGCCCTGTAACGCTCTGGTTATGAGCAGAGGTGGTTGGAGATGGTGGTGG TACAGTAGCAGTAGCTGGAGAGTCGGAGACAACAAATTTATGCTAAAGAA AGATAAGGAAGATGGAAACCGAGCCGTGAACGAGAGTAATGGACGTGAAC TCACCGTAATGGCGGTTTGGCCATATTTTGATTTTTGGAAATGGGGGTGA TGCCAGCAAGAGGATCAAAAAATGACAGCCTTTTGAAAACACTCTGCCTC CACTGTAGTAGGGTGTTCAAACACAGGTAGGGATAAACCGGCAGCTTCAG ATGCTAGTAAAACCATAGCTATCTTGTCCAGCTGAGCAGTTTAGCTAGTT TGACAAAATTTATGCAAGAGCAGTTGCGGTTTTGCATGGGTTAAAGAACA CCCGTTTTGAACACACATAGTCTCTGGTGAGCACCGTAAGTCATATTGAT CTGTTTGGGAGTCCACAAGAAGATTAGGACACAACTTTTTGGGGGCAAAT TCTAGACAGATATTTTCCGTTGCTTGTTAATCCATGACGGTAGTTGTGTC TTCAGTATGCATATAAGCAAAACAGACCAGTGAGTGAAGTAGTGAAGCGG TCTGGTGTCTGATTCACTGGTTGGACCACAGGCTTAGACATCAGATAAAC ATATTATATCACATCATCAATAAAGAAGAAAAACTTAGCCCAGTTTGTTT TGGGACTTCTGCTGGAGTGCTTGCTCATGGGTTTGAGGTCTTCGATCCCT CCCTAATAAATCTTGTTCGCATAGTTTTTCTGTTTTGTTGCCAAATGTTT TTTTAATCAAACTGAACTGAACAAGGTGCGGGCTCCCTGGTTTTATGGCT TTATAAAACCTCTGTCAGTTTGAAGAGAGGCTTGGTGGGTGCCTCAGCAA CGGGTGGGGCCGAATGCTTTGAACATGGTTATTAGAATCCCTGTAATTTC CAACTCCTGCGCTCTAAATGGCATACAAGAAAATTTTCCTGTGTTTTTTT CAATCCTATGGTTTCTACCTTGGTCCTTTTCCTGTTCCTTCATTTTTTAT ATTCCTGTACTTCTCATATTCTGTGTTCCCAACAGGGCCTTATAGTAATT TCTTTGCCCATTTTGACTTAGATTTAGCCTATTTTCTCACTTGTTTAGTT ATTATTATGTTCATAGGGAAATCTCTACGTTCAAAGAAGAGCGTAATGAA AGATGCTGCTCAAACTGATGATGATGAAAGCTGACCACTTTGTTCTCCAT TGCATGGGGTAAGAAGATTTTGACTTCTTTAGGGAATGCTTTATAGTGAC TGTACTTTTTAATAATTCAGCTATTGTTGTTGAAACTTACCCATATAGGC CTTTAGTCGAAATACTCCTCTACTACCGAGCATTAATAAGTACTCCCTCT GCCCCATCATATATGTTATTACAACCAATATTACCCATATAAGATGTTTT TACGACCAATATACCCTATCTTATATTATGGGACGGAGGGAGTAGTTCTT TTGGCATTAAATCCATAAAATGTCAGATTTGCTGGAATGTTATTGACATT GAAAACTACCGTAGGTAGACCCACCTTCAGCACAAGGCGCTTGATCGGTT GGTTATTTGACTCTCTAAATGGCTATGGGTAATCTTTCACACTCTGTAGA AGAACAACAACACCAGAGCTTATCCTAATGAAAAATGTTGCTGGTAGAAC CAACTGGTCTACCCGCCCTAGGGCGTAGCTTGTAGGGGAAAGAGGGGGAG ACGTGCGGGCGAGGCGGCGGACGCCGTCGTGCGTAGCTGGAGAGGAGGGG CGGCGGCTAGGAGACCGACTCCTCAGGGAGTCGGCAATAATGAATATTAT TATTGCTTGCTGTTTGATTCGTTTACAACCAGTATATAAAGAACTAAAAC CCTAAACTGATAATGGGCTAAGCCCCTAGTTGGCCCCCTCCTCACGTAAC TCAGACCGGTCATAACATCTCTCCCCGCCTGTGCAAACAGCTCGTCCTCG AGCTGGTAGTCGGGGTAGTGCTGGCTAAACTCCTCGCGCTTCTCCCAAGT GGCCTCCTCCTCCGGAAGGCCTTCCCACTGCACCAGCAAGTACCAAATGC CGTGACGGAGCTGGGCGCATAACACCTTCGCCGGGGTCGGAAGAAGACGA CCATCGGCGATCGGTGGTAACGCCGGTGGCGCGGCCGGTGGCTCCCCACG AAAAGGCTTCAGCAGACCCACATGAAAGACATCATGGATGCGGGAGCCCG CTGGCAGCTGAAGGCGATATGCAAGGGTGCCCACACGCTCCAAGATGACA AAAGGGCCAGCGTAGCGAGGCCCAAGCTTGCGCCTCGCACGCGGGTCGAG GGACTGGGTGGATCGATGAAGAAGGCACAGCCACACCCAGTCACCCACCG CATAGGCCACCTCACGATGATGGCCGTCGTAGTAGTGCTTGGCGAGCTGC TGAGCCTGAACGAGACGCTGCCGCACCTCAGCAAGCATCTCGTCGCGGTC GCGGAGAAGCTCCCCTGCAGCCTTCGTCCGAGCAGTCGCCGGATCGACCG ACAAGATGGGCGGTGGCGGCCGACCATAGACCACCTCGAATGGCGTGGCA CGCAGGGCAGAATGGTAGGAGGTGTTGTAGCAATATTCCGCCCACGCGAG CCAATCCACCCATGCGCGAGGACGATCACCTGTAACACAACGTAAGTACA TGGCGATCACTTTGTTAACCACCTCGGACTGGCCGTCCGTCTGAGGATGA AACGCCCGTGCTGAATGGAGCTTGACGCCCGCCATCCTGAAAAGGTCACG CCAGACGTGCCCCATGAACACCGGATCCCAATCACTGACGATCGACGCGG GAAAACCGTGGAGGCGGACGATGCCGTCGAAGAAGGCACGAGCAACAGAC GCAGCGGTGTACGGGTGGCCAAGCGCGATGAAGTGTGCGTACTTGGAGAA ACGGTCGACCACCGTTAGGATGACGGACTTGCCGCCCACCTTGGGGAGGC CCTCGATGAAGTCCATGGAGATGTCGGACCAGACCTGGGAGGGCACCTCC AGCGGCTGCAACATCCCCGCCGGTCGCAGCGTCTCCGTCTTGTTGCGCTG GCATATCTCGCAAGAGCGCACCCAGTCCTGGACCAAGGCCCGATCCCCGG GGATGTAGAAGTCGGCGCGAAGACGGTGGAGGGTCTTCTGGACACCCTCA TGGCCCGACGAATGGGCCAGCAGGAGCACCTGGTGTCGAAGATCGTCGTG GTCGGGCACGAAGATACGGCGCTCGTGCAAGAGGAGCCCCTCAGCCCAGC GCCATGGAGCCTCCAACTCGCCCTCCTCCAACTGCTGCCGCAGGAGCTGG GCGTCAGGCGCTGCCGCAGTAGCCTGGCGGATGGTGTCGAAGAGGGCGAA GGAGGGGCCTGAACGAATGCACATCGCCGTCCCCCCGGGTGCGCCGTCCT CATCGTCAGCGTCGCGGCGAGAGAGCGTCGGCAACGGTGTTGAGGCGCCC TAGTCGGTACTCCACAGTGAAATCAAAGCCAAACAGCTTGCTGATCCACT AATGCTGCGGAACAGTCGAGAGCCTCTGATCCAACAAGTACTTGAGGCTG TAGTGGTCCGTGCGAATCTGGAACGAGCGCCCCCAAAGGTAGGGACGCCA ATGGCGCACGGCCTGTACCAAGCCACTGAGCTCCTGCTCGTACGCCGCAA GCTTGAGATGGCGTGCGGCAAAAGGCCTGCTGAAGTAGGCAAGTGGGCCA TCACCCTGGTGAAGCACGGCACCGAACCCCACGCCGGAGGCGTCGCAATC GACGATGAACTGCCGTGCGAAGTCCGGCATCTGGAGAACATGGCCCGTCG TAAGGGCCCCCTTCAGGGCCTCGAACGCGGCGGTGGCCTCATCGTCCCAG GCGAAGGCGTTGCGGCGCAGCAACCGCGTGAGAGGTGTTGCGATGATGCC AAAGTCCCGGATGAATTTCCGGTAGTACCCGGCGAGACCCAGGAAGCCGC GAAGAGCGCGCGGCGAACGAGGAGGCGGCCACGCGGAGACGGCCGCCACC TTGTCGGCGTCCATGGCCACCCCCTCGGCGGAGATGACGTGGCCGAGGTA GGCGACCGATGTCGTCCCGAACGAGCACTTCGAGCGCTTAAGGTGAAGAT GATGCGCTCGAAGCTCGTTGAAGACGATGGCGACGTGCTGTAGGTGCTCC GCCCACGAGGCGCTGTAGATCAAAATATCGTCAAAGAAAACGAGCACAAA CCGACGTAAATAGGGGTGGACTACATCGTTCATCAGGGCCTGGAATGTCG CTGGCGCGTTGGTGAGGCCGAAGGGCATCACCACGAACTCGAAGTGGCCA TGATAGGTCCGGAACGCCGTCTTGGCGATGTCGTTCGGGTGCATGCGCAC CTGGTGGTAGCCTGACCGTAAGTCGAGCTTGGTGAAGAAGCGCGCCCCAT GGAGCTCGTCGACCACCGGGATGGGGAACTTGTCCTTCAGCGTGAGCGCG TTGAGGGCGCGGTAGTCAATGCAGAAGCGCGATGTGCCATCCGTCTTGCG GACGAGCAGCACCGGCACCGAGAATGGCGACGTAGAGATCCGGATGATGC CCGCGGCGAGCATGAGGGCGCACTGTCGCTCGAGCTCGTCCTTCTGCAGC TGGGGGTAGCGGTAAGGCCGCACGGCCACCGGCGCCGTGTCTGGGGCGAG GTGGATACAGTGATCGTACACCCGGGTAGGCGGGAGGCCTTGCGGCTCGT CGAAAAGGTCGCCGTGCTGCTGCAGGAGGTGGGCCAACAGAGGGTGCTCG GAGTCGATGTCGGCCGTGGTGAGCTGGAGCTGCGGTGCCGGGGCAGCGCC CCCAATGCCCGTCCAACAGACGCGGCGGCCCTGGCGCCAGAAGGTCATCG TCAAGGCGGCGAAGTCCCACAGTATGGGCCCGAGGGGTCGCAAGAAGTCC ACGCCGAGTATGAAGTCGAAGCAGCCCAAGTCGATGCCGGCGCACGCGAT GGTAAAGTGCTCGTCGCCGATGGAGAGTGGCACGTGCTGCGCCACGCCGT GGCAGCGAAGGCGGTCGCCGTTGGCCACGGTGACACGGAGATGGTCGCCG CCCGTCGGCTGGAGGCCCAAGCGCCGCATGGTGGCCTCCGGCAGGAAGTT ATGTGTGGAGCCGGTGTCGAGGAGGGCCACCAGCTGCTCGCCGTGTATCG TCACCGGCAGGAGCATAGTCTGCTCGTTGCGGATGCCCGCCAACGCGTGG AGCGAGACCACGCACGCCGTGGCCGGCGTGGCGTCGAGAGCGGCCTCCGT CGCTATGTCGACGCCCGTGTCCGTGTCGCTGTCGTCTACCGTCTCCAAGT AGAAGAGGCGCGGGCAGACGTGCCCTGGCGCGTAGGGCTCGTCGCAGTTG AAGCACAGGCCGAGGCGACGGCGCTCCAACTGTTCCGCCGGTGTGAGGCG CCGGAAGGTACGCTGCGTCGCTGCTAGAGCGGGCGGTGCTGGCCGCGTGG TCGGCGCTGCGGCCGGCGGAGGGCGGGCGGGTGGCCGGGCCCCGCGACTC GGGTGAGGCGGCTGTAGCGCCTGGGCCCGGCGCTCGTACGCCCGAGCGTA GTGCATCGCCGTCTGCAGGTCGTGGGGGGCCTGGAGCTCCACGTCCACCC GTATGTGGTCCGGAAGTCCCCGACAAAGAGCTCCGCGCGCTTGTTGGGGA GATGACCTCGGGTAGGGTAAAGACGGGAAAAGACGAAAGGAGGTTGCCCG TCTAGTTTCCGAGTTACTGTCAGCGTCGGCCGAATCCTGTTGAGGTCGGC CAAGACAGGGAAGGGCAGGACCCTTATGATAAAGGCAAGGCATTACCCGA CCGGGATACTACGTAAGTCGGCCGGGTTAACCCGAGTAATCTTAATGCAG GTGAAGGACAAGCCGAGTTACGCGAGGTAAGGCCGAATGATACGAAGCTT GCAGGAGAAGGAGAAACCTAAAGTCAAACTCTAGCTGTAGGCTAGGAGGA ATCTGAGCGGAGCCAAGCACAAGGGACAAAGGTGCAGAGCGTCAGAGGGG CAGAAGGAGGTCACGGAGGTGACAGTCCTGAAGCCCGAGGCACGCAGGAG GGGCCCTCTGGTGCCTTGCCGTCGTTAGAAGGGCGACAGGGAAAGGAGGG CGCCGAACTACTATTTTGGGACAAGCATATTCCTCGAATATGCTTGCCCC GTCAGCCCTAAAGGCACCCAAGGCTCTCCTTTATAAGGGGAGGCTTGGAC CCAGAGGAAGGGATCGGCTCATTTTAGTACCGTTAGGCTGGTAAAGTTCT TCCTTTCTCCTTACATACAGCTCGAGGAGCACTTGTAGCCCAAGGAAGGA GAAATAAAGATCTTTGCCTTAGTCTTCTGAGTGTAGAATTAACTGCATCA TCCCACCCCAGATCCCACTAGCATCCATTGGCCCCTTACTTTAGCCTACC CATGGCATTTGCCGTGTCACCACCACGACAACGCTGTTGTCCCGTGACAC CCGGGGCGTGGCAGGCGAGTGCCTGAAAGCGATCGGCGAAGTCCTGCACC GTGAACGTGAAAGGGAGGCGCCCTAGCTCCGCGAGGCGGCTCCCTTGGAT CGGCGGCCCGAAGCGAAGGAGGCATAGCTCCCGAAAGCGGTCCCAAGGAG GCATGCCGCACTCGTCTTGCTCGAGGGCGTAGTACCACGTCTGGGCGGCG CCCCGGAGGTGATAGGAGGCAAGCCAGGTGCGATCCGACGCCAGGGTGCG CTGCCCGCGGAAGAACTGCTCGCACTGGCTAAGCCAGTTCAGGGGGTCCT CCGACCCATCGTAGGTGGCGAAGTCGACCTTGGTGTAGCGGGGCGGTGGC TGTGTAACCCCGCCGTGGCCGTGCGCGTCGGGGCGCGCATACCCCCCGGG GGCGGCGCTCGGGAGGGAGGGAACCGGCGGCTCGCCGGCGTTGGTGTAGA CCGGCTGGGTTGACGGCGCTGCGAGCCACGCCGGCAGTGGAGACGGCGAC GGGGGGAAACGAATCTGGTGGATGGGAACGCCCCCCGTGGCGGCGACACC CGGGCTGGTGGGTGCGGACGGCGGCCACTGCGTCCAGGGCTGGGCCGATG CCGGTGGCAGCGGCAGCGAAACGCCTGAGAAGGGTGGGGCCCATGGTGCG GGCGCCGGCACGGGGACGGCGGCCGGCTGCGGCGGCGTCGGGGGCCCCTG GGAGCCGATCAAGAAGAGGCGGATGCCTTGGACCGCGGTGACGAGGTCAT TGATGGCCCCGCTCATCTGCTCGGGCGTGTAGAGGACGGGCGCCGGCGCA GCAGAGCCCGCCGACGTGGCGGCCAACGGAGAGCCCGCCGTGGTGGCGAC GACGGAAGGGGCGGGCGGAGGCGCGGACGACGTGGTGGTGGGCGACAGAG AAGACATGATCGCAGCCGAGCTTGCTGATACCAAATTGGTAGAACCAACT GGTCTACCCGCCCTAGGGCGTAGCTTGTAGGGGAAAGAGGGGGAGACGTG CGGGCAAGGCGGCGGACGCCGGCGGCAGGGCGGCGGCTGGAGAGGAGGGG CGGCGGCTAGGAGACCGACTCCTCAGGGAGTCGGCAATAATGAATATTAT TATTGCTTGCTGTTTGATTCGTTTACAACCAGTATATAAAGAACTAAAAC CCTAAACTGATAATGGGCTAAGCCCCTAGTTGGGCCCCCTCCTCACGTAA CTCAGACCGGTCATAACAGTTGCCAACAGTTCTGCTTTGATTCAATGCTT GTTACTTGTCAGCACATACATCTGCTGCGTCCTGCTTACTGCTCAGTCTT ATATCCACAATCATTGAGATTTCATAATACCAGCAGCATTCTAGACTTCC TAGCCAGAGCATTGTTATTTTGTTATATATGGTGTAGCTAGTATAATCTC TGCTCTTTTGCAAAGGAGAAAGTTGTCGTGTCTTGTTAAGTATGCCCAAG GTGTTCCATAAGAACCTCTCTCCCACCATGGCACCATGTGCTTGCTACAC TCTGTGAACACGCGTAGTGATGACCTACCAAAGTTGTGGGTCATACACAT GGAGATTGGGTTGCAATGGTGAGGTCAGGATTATACCCACATAAAAAATG GATGTCTTTGACAAAAAAAGGTAGAACACTGAAAAACATAAGTTCTGTGG TGTAGAGCTAAAGTTTCAATTGGGATAATACTTGACTTGATATCTATTTT CTGTATTTCATTAGTAAAACATCCCTGATTAATTTCTGCAATATTTCTTC CCTGTATACCATAGTAAACACGACCCCGTCGCATACAATTGGTGCAATGG CTTCAACAATGCTGATTGTTGCTCCCTGAACAGTTAGTCTGTTGTCATTG TTTTCATACTTTAACATTGATAACCGTTGGCCGATGAGATTAGGCCTAAT TTATAGTAATATACATTTCTCTTGCAGGTTAAAAGTCGAACTAAACCTTT TTCCAGGGTACCTAGGAGAATTTGTGGTATCCTGTTATATAAGTCTGGAA CCATCTCTGATTGTTTCAACAAGCTGGAGTAACGATAGCAGCTCCTACTT TCATGGAGACGTGGTGACCAATCACCACCATTTCATACTTCAATTAAACA TGGAAACAACACAAAAAAGTGAGCTTCCACTTAATGAAGGCGATGTTGGT TATTTCTTGACTAGTCGCTAGATTGTGGGACCATATAGTCTGCCAGCTGA TGGAGTCCTCACAAGATCTTTTCAGCACCATCCTTGAGATGGATTTGGTG AATGTTTTTGAATCTTTAATATTTCTTTGAGTCTTAACATCTTGAAAGTC TATATTTCCTTGGTTGGAAAAGACTTTCTGACACATGTTAATGGGGCCCG AGAAAATTAAATGGCTGGTGAATAAGCTGATTCCTCTAGTTGATTGGATG ATCTTTAATCCCCCCTCTATTGTTTACTGTTGCTCTTCCTGGAATTTTCC TTTATGACTAAGTGAAATTTGAATATGTTCTTGCTTGCTTGACCAAAAGC ACGAGTGAGCTCATAATAACAATTCTCGTGTGCAGGATCCTGAAGCTCAG AGTTACATGGCTCTGCTGACTGCTGTGACCGTTGTACATACAGAACGCAG GATCCTGAAAAGGCAGCTCAGAGTTACATGCCTCCACCACCTGCACTTGG AAGCTAAATTATGGCAGTTGCCAGAAGGTAGCAATGCTGTATATTTCACT TGAAGTTGTAGTGATTATTGTATCAACCAGCCCATGCATCATAATTTCGT TTGTAACAATAAACACGGAGATGGAAGCAGGATGCTTGTTTCTTGAAACG GACATCAAGAGCAACTCAGCAACTGGAGTCTAGCAAGGATTCTTGATTGC TTGTTGCGCCAAGTGTGGCCAACAGAAGTGAGACAAACATTCTTGCCCAC CTCCGACATTGGATGGTTACAATATTAAATTGTCTCAGATATATCTTGAA TCAATTGTTTGTATGAGTTGTAAATTTGG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.