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GrainGenes Sequence Report: AA000880

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Sequence
AA000880
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA000880
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGCCGCTCCTCCTCCACCCGCACGCCGTGGAGGGTGGGCAGCTCCTCC
TCCGGCCTTCTCCCCGGCAGCTCCTCCTCCGGCCGAAACTCCTCTCCAAT
CTGCAGGTACCTCTCCCCTCCCCTTCCCCTCTCTCAAAATCAGCTTGTAG
GATTTGGGCTTGAGCTTGTAGGATTTGGTAAATGTCACTTGTAGGAGTTT
GTAGGATTTGGTTGTAGGATTCACTTAGATGATATTGGTAAATGTAGTAT
AGGAGTTGCTTGTAGGATTCACTTAGATGATCTTTGTAAAATCATGTAAA
ATTAGAAACCCAATCAAGTACTTGATCTATTAGAATTCACTTAGATGATA
TTGGTAAATGTCACATGTGCTTGAGCTTGTAGGATTTGGTTGTAGGAGTT
GTTTGTAGGGAACATGTGTTTGATATTGTAGGAGTTGTTTGTAGGAAACA
TGTGTTTGATCTTGTAGGAGTTGTTTGTAGGAAACATTTGTAGGATTTCA
CTTTTGAGCTTGTAGGAGTTGCTACATTGATTGGTGTTTGTATCTTTTAT
TGGTAGTAATGTGTTGTAAGCATGTGCAACATATATGAATGATATTGGCT
AGTGCAAAATGAATAGGTTAGAGCAATGGTATTTTAGGGTGATTGTAGAT
GGCATGGTATTATTGGTTGAACATTGTTGCATTTTGTTGGGTATTGCATT
CTCTAATGGATGCTTTGGTATTTGTTTTGGCTATTAATATAGATGGATTA
TGCAAAAGTCCTTCATGTGCATCACGGTGGGTGTGTTGTGCAATCGGACT
GTGGTGTTGAGTTTGTGGATATGGCAAAGACTGTGATATTTTTTCCGACT
AGTCCTAGTCTTAGTGATGTTGTTTTCAAGGTTAGAGCTGCCCTTGGATG
GAGTGACAAAGGCGATGAAGTTGTTTTGGAAGGAAGATATGATGCGGGTG
GCTCTAGATCTTATACTGAGATGATCCCGATCAACGGTGACAACGAGTGG
GATCTATACAAAGAGTTAGTGGAGAACTCGCAAATAAAATCTTTGGTCGT
GTTTGCCGTCAAGGTCACCGGGCATGCCCATCTTCTCATCGACTTGAACA
AGCGGCCCTCGATTATCGAAAGAAGCAACGATGACCGTCCTGAGGATGTG
TATGATGCGGGTCCAAGCCAACCGCCTGTGTGGGACACAGAAAATCAACA
AGATGAAGATTACTTGGAGGAGATTGTGGAGGAACCCATTTATGTTGAAA
GAGAACGAGTAGAGATCATCGAGGAGAAAATGAATGTTGAAACCTTAGAG
CCGATCGAGGAAGAGTTTGTAGCTGTCTCGCCAATCAACATTCCATCATC
GCCTTGTGTACCTTTGGTGGCATCCTCGATTCTTGAGGGAGATCCATATA
CCTATGAAGATGACAATGAAGAGGACGAGGGGTATGAACATGCTTACGCT
ATGGACTCGGACGATGATCGTTCGGTTCCCAAGTTTTCAGAGAAGGAGAC
CGATGCATTTGTCAAGGTGTGGGGCAGAGATCCTAATGTTCATGAGTTCA
AGGATGTTAGGCAGGCTCACCTAGCCATGGCAGACTCGAACCTATGGGAG
TATGGGCCGGAGCGGCCTAGACCCCTCACCGAAGACGAGGCACAGAGTCG
ACCTAGGGCACGGCCTTTGATATACCCGGGGCTAAAATTCAAGGCTATGT
TGGACATGCAAGTATGGTTCCAAGAGTACGCCGTAAGTCATCATCAACCC
TACATAGTGTTCAAGTCCGACCAAAATGAAAGATATGTTTTGATATGCGA
GAATGAAGATTGTCCATGAAAGGTATGGGCAAGGAAGAAGAAACCTGAAG
GTTGGTGGAAGATAAGTAAGTATGAAGGACCGCACACATGTGTCAATGCC
GTCCCGAAGGGCAACAAGCACCGTCAGCTGACATCTACTTTTATTGCACA
CCAGTGTGCCAATGCCATCAAAGCTACCCCTACCCTTCAAGCGGCCTCTT
TGGTCCAATTTGTGAAACTCATATTTGAGTATCATATCAAGTATGGAAAG
GCTTGGAGGGCTAAGCAAATGGCTATGAAGATGGTTTATGGTGATTGGGA
GGAAGCATATGGGAGGCTCCCTAGGTTGTTGGCGGCGATGGCACATCGAA
ACCCTGGTATGACGCACATTGTGCAGCCCCATCCAATCGAGACTCGCACG
GTCGAAGGTGTCAAGTACCAAGTGTTCCGTCGAGCATTTTGGTGCTTCCG
CCCTTGTGTTGAAGCATTCAAGCATTGTCATCCATTTCTTTGTGTGGATG
GAACGTTCCTTACAGGGAAGTTTAGGGGCACCCTTCTTGTTGCTATCTCT
TGCGACGCGAACAACCGATTGGTCCCGCTTGCCTTTGCTCTTGTGGAAAA
GGAGGACAACGTCAGCTGGAACTGGTTCATGCACTTGGTGAGGACTACGA
TTGTTGGCCCCGGAAGAGAAGTCTGTGTCATTTCTGATCGCAATCCGGCC
ATATTGAATGCCATGAGGGCAGAAATACCTGAGCATCCCCTTGTTAAGCA
CCGTTGGTGCATAAGGCATTTCGCGGGTAATTTCTACCATGCTTGTCGTA
ATAGAGAAATGACTGAGTATCTCCGTAGGCTTACCTTGGTGTTCGAGCCG
GCTGTATTTGAAGAGATGTTCAATGAGTTGTATGGCTTGACAAATGAGAA
GGGGAAGGGTTTTCTTAGGGAGAATTTGCCGAAGAAACACCTATGGGCTC
AAGCTTTCGATCAGGATGGGGTTCGGTATGGTCACATGACAAGTAACATG
GCCGAGATATTCAATAAGGTGCTAAAGGGTATCCGCACGCTACCGGTAAC
TGCCATCGCATCCTTTACTTTTGACAAGTGCAACGAGTATTGGGTAACGA
GGAGCGACGAAGTGAAGGTGCTAATTAATGCCGACAAAAGATGGCCAAAG
ACTGTTGAAGAAGAACTTGCATACCAAGCCATGAAATCTCATGACCAAAC
ATGGACTTGTTTTGATAAGGAGGTCTGGAAGTATGAGGTTTCGGAGGTAG
GAGGTACCAACTCAGGTGGTGAGCAGTATGGTGGTCCCAAATATGTTGTT
GTGCTTGCCGAGTACTCTTGCACGTGCCAGATGCCTTTACAGATCCATCT
ACCATGCTCTCATATAATAACCGCGTGTCGTGCTCGGGCGTGGACCCATA
CAACTCCGTCTCACGGTTCTACAATCTTGAAGAGCTATATCGCACATGGG
CTGGTAGATTCGAGCCTTACCTAGACATGGCCCAATGGCCTAAGTATATC
GGGCCGGTGTACTTACCAGATAGCAAGCTAATGATCGACACAAAAGGGCG
AAGAGTGACTAAGCGGTTCAAGATGGACATGGACCAAGCCGATGGAGGGA
CAACCTTCAAGCGACCCCGTCCGAATGATGATTTTGTGGAGGACTCCGTG
AAGAACCGTTGTTCGGTATGCGGCGAAGAAGGTCACAAGAACACAAAAAA
ACTAAGTTGTGAGGATCGGAAGAAGAAACTAGCCGCGGAAAAAGCATCGG
CGGAAGCTGCTGCCGCCGTGGCCGCTAGTAACCCTTCATCAAGCGGGCGT
GGTAGAGGCCCTAAGAGGTCTCGAGGGACTAGACATATGAAAGGTTATCA
CCGTCGTCCAAAGGTGATAGGGAAATTATCCGAGGCGTTACAACGGGCTA
GAAAGGTTATATTTTGACCTATGCATGACCTTCTGTTTTTAACACATTAT
TCTTGTTAGGTGTCTTTATTTTGTCCTATGCTATAAATTATCTTTCAATT
ATAACTGCATGTTTCTAAAACTCACAAAAAAACCTTGTCTTTGCAGGATG
GCGGCTCGGGCACGGTACCATCTTCTTGAGGCGGAGTACGAGGAGAGCCA
CCGAGGTCGCATACTCTCGGAAACCCAGGTATGCACGTATTGTCTAACAT
GATCATCACTAAATTAATTATTGTTCTCTATTACTGTTTATTACTTGCTT
AACTAATGCTAATCTCTATATTGGTAGGCTATACTACCCCTTCGCATACG
TGGACATAAGGTCAATACAGAGCAGATGGTTTTTGATGAGAGGTACACAC
CGTACTTACGGAGGGCGAATCTAATTGGCTTTGTGACCATGATTGAGCGC
GGGCTACCGACCTACAAGAGTGTCGCCCTTACAGCGCTAGTCGATAGATG
GCACGTGGATACACACACGTTCCACCTTCCATGTGGCGAGATGACTATAA
CTTTGCAAGACATGGCGATGTTGACCGCCTTGTCTATCTCAGGATGGGCT
GTGACTGGAAAGATACAGGCAGACAGATTCAGGGACATGGTTGAAGAGCT
TCTAGGAGTAAGGCCACCGGAGAAAATTGCTGGGACGAAGGGGAGCAAGA
CAGGTGGGCTGAGATTGACTTGGATAGAACACCACTTTGGCCATCTTCCC
CTCGATGCCAACGAGGAGACCGTATCACGATATGCTCGAGCGTATGTGAT
GTATGTGTTTGGGAAGGTGCTTTTTTCAGACTCCGGGGGTAGCGACGTCT
CATGGATGTATTTGCCTCTACTACGTGACTGGGACGATGCTGGGAGATAC
AGCTGGGGTTCGGCTGGGTTGGCTTACTTGTATCGCCAACTTGATGAGGC
TTGTAGGAGGAGAAAGGGTACATCAAACATGGGTGGTTGTGTTCTGGTCT
TACAGGTTGGTTTACTTTGACCAACATAATTATTTGCATTACCATTTAGC
TTTGCATAACCATCTCGCTTTGCATAACCTATTTGCTTATTTTCAGGTTT
GGAGCTGGCTTAGATTTCCCATAGGCCGACCCACCACCTACGCACCCAGG
GATTGGGAACACCCAGAAGAAGACCGTGCACCCACCGTTGTGTACTTTTA
TGAGGATGTATCTACCAAGTGGGGGCCCTCCGATAATCTGTATCGATCAT
ACACCGAGGATTTTGACTCCTTGCGTCGGGGGCAGGTGAGTGTCATATCG
ATTTTGACTCCTTGTCTACTTTTATGAGGATGTATCTACCAAGTGGGGGC
CCTCCGATATGTTGTCATTGTTGCCTAACATCTTCTTTTTTCACTCATAG
GTTACATGGCAGCCATACACTGTGCGTGAGCTAGGCGAGGACTTTAACTT
AAACCCGATGTGCACTCAAGACATGGATATGTGGACGAAGAGGTGCCCAC
TCATTTGCTTCTACGCGGTCGAGTACTACCTTCCACACCGAGTCGGGATG
CAGTTTGGTAAGCTTCAGGAATTTGCCCCGGAGCACTTCTCCACTTCGTC
TGATCTGCACAAGTAAGATTCCTTCAGCACCAACCCATTTATCCTGTCGC
ATATATGTTTCTCCTTTGTTCTTCATTGTCTCCTCTATGTGCTTTTTGAT
AGGCTTGATAGAAGGAAAAACAAGTCAATTACTGATTGGGAACATCATCA
CCAGGAGTATATCCAGGAATGGAATGACAAGGCATCTCATAAGGATATCC
TCCAGCAGAGTTGGACTTATAACAACAGCCGAGACTACGAGACATGGCTG
CAGAAAGCTACTCGGGTTCATCTCAAGCCCAGCTGGACCAACATCGATTG
CTTAGAAGAGGGATCCGATGAGCCAAATGAGTTTGATGAAGAGGTCCGGA
TGGACAAGCGTGTCGACCATAGCCCCGTGAAAAACCGTGTGGTAAGAACA
TAGTAATATCAAGCACTGAATTATTTGCTAGTTCTCGTTGATGATGTTCA
TATGTGTCATGCTTTGTAGGCCGGTGAGCTTGTACGAGGTATCAAAGAAG
CTGAAGTGGCGCTGAGGGTTACTCCAGGAAGTCCAGCTGCCGAGTCTACC
CTACGCAAGTGTCTCGAGGTAACGACTAGCAAAGTTCACAAGTTTGGCAA
ATGTACATATGTTTCCCGCTCATGTCTACAAGTCTAGCCAACACTTACAT
TGTTCTATTATGCAGAAATTGGTCAAACGTTCCCGCTCGTTGGTGTCTAG
ACTAGGATGCCGGGATCCTACCGCTGACATGACGAGTCTCCAGCTGAGCG
CTCCAACTTCTGGTGGCAGCGGATCCATGTACAATTCAGGTGACGGGACC
TCCATCGACTCTGACACTCCGTTGTCCATGTTTCGTGGAGCTTCGTCCTC
CCAAACTGTCCATGATGGTACGGAGCCAAGCCAATCACAAGGTATGCCTC
ATAGGCGTTCTCGTGCACGCCGCGCACCGGATATTACAACCCCCGGCACT
GATGCTCTCAAACCACGCCGTAAGAAGGGTGTCGTCAAGAAAAGGAAGGC
GCAGAAGTGAGATTTGTTTGTGTTGATTGTGCAGACATGTTATGAAACTT
GACTATGTATGACTTGAACTATGTAGGCGCAGAAGGTGTGTCTGGGGGAA
CAAATCCAGCCCCAGCGTTCGGCGCCGAACTGTGCAACTTCGGCGCCGCT
TCAGGCGACGCCAAAGTTCGGCGCCTATATTCGTCTTCGGCGCCACACCA
GACACAGAAGGTGTGTCTGGGGGAACAAATCCAGCCCAGTGTGCGGCGCC
ATTTCACCTGGCGCCGAAGAGTGCAACGCAGGTGGCGCCGACCAAAGTGT
TTATTTAATTTAGTAATTTTTAACTACAAGACATGGAGTTCTCTTACAGA
ATATTTAATTATTGGACAAATTGAGAATTACAAAACATACATGGTTCCCA
ACCTTGTTCTTTCAGGAACATACACATAAATCTATGGTTCGCCACCTAAA
TTGCGAAGTTGTGTTTTCAGCCTTTCAATCTCCATATGATTGTTGTAAAT
TAGTACCCTAGCTTCCGGAGAGAACTCCTCGTCTTCGTACTGATAATGGC
CGCATCGGTACCCCTACGAATGAAAGTTCATGATATAAATAGTGAATATT
GAGGCCTAACAATTGGCTGTGTTTATTGCGCGTACCTCTGGTTTGGCACA
TATTGAGAATATTCTTCCTGCATTCTCGAACGACCAATCATATTCGACCC
TAAAAATTGGTCGTGTTGGACAACGGCACCGTATACCTAGAATACTTGGG
TAACGATCAGGATCATATGGATTGACCGAGCTACCTGGAAGAGCACGGTT
TCTGGACATGGTGCTAGTAATTGTTAGTTGAAAGAAAGAGTGCATGGACA
TTTATAGTTAAAGGGAAGCAATGAATCAGTGTTGTGATGAATTATTGCTC
CTGCAACACTCACATGGCTACGAATCATTGAATCATTGATCACTGAGTGA
ATCATTGGACCATTGAAATACATGTGCACTGAGTCACTGAGTCAGTGAAT
CATTGAATATTGAAATTATTATGACTGAGTGGCGGGAGTCAGCGATTCAC
TGAACCATTCTAATAATTGAGCACTGAAACACTGAGCAATGGAAATCATT
GATCACTGAAACACTGAGCATTGAGCACTGAAACACTAAGCACATGTGAT
TTGGATAGCACACTACTACTAGTAGTACTACACACTGTTGATGGTGACTA
CACACTGCTGCTAGTAGCACAGAAACACTGAAACACTGAGCACATGTAAT
TTGGATAGCACACTGCTACTAGTAGCACTACACACTGTTGGTGGTGACTA
CACACTGCTGCTAGTAGCACTGAAACACTGAGCACATGTGATTTGGATAG
CACACTGCTGCTAGTAGTACTACACACTGTTGATGGTGACTACACACTGC
TGCTATTAGTACTACACATTAGTGATAATGCAGTGTATAGTTGATGGTGA
CTACACACTGTTTACAGTGGCACTCAACGAAAAGCAAACATACCCCATAC
AATACTTTAGAAATGTCTAGATATATATATATCACTCGTACACAATGTTT
TCCGTCTCACCTACAACAACACAACAATGGCAGACCTTCGACGATTTTGG
TGCGACTGCAACTTTGAAGCTAGGCTATGCTATGACCGGAGGTTCCGAAA
TGCTGGGCGAAGGTATTGGGATTGTCCTGGGGCAGACGGCCAGGTATGTA
CTTAAAACCATCATATTTACAAATATATAGCCTATGTGTGTTATATTTAA
TAATTGTATACCATTTTAATAGGGTAATGACCAATGTGGATTCTTCCAGT
GGTGCGACGACTCGTTTCCTGTTGAAGCACGGGTCCTCATCATGGACCAA
CGTGTCGAGATAGAAAATTTGAAGGCACGTATTCGGGCACTCGGTGGGGA
GCCGTTGTATTTTTTTAATTTAGCCTGTGTGTAATATTTACTTATGTGTC
GTACCGTTATGTTCCGCAGAATTATGTTTCTCACTTTGTTTGCCGAAACA
CTTGTAACTTATTTATGAATTCTATGATCAATAAATTAGCGGGCTAATAT
TTCTATATATATCCCTATATTACTTTTAACTCTCGGCTGGTGTGTCTGTC
TTCGTCATTCCTCCATAAATAGCACCCGGGTGGTTGTCTGTCTGTCTTTG
TATTCACTCCAATCAACCTCTCTCTATCTCTCTCAGCCAACTCCTCTCAC
TCTCTATCTCTCTCAGCCAACACCACTCATGGCCGGTGCAGGATCCTCTT
CAAGGAAAGGGAAGGAGATATCCTTTGAACTCGTAGGGCCTCGTAGTGGT
ACATTCCTCCCACCAGACATGCCACCGATGAATGAACTAGACGGCCATGT
TCCGTGGATCATACAGTGTGATTGCATGGTGGGATGCTGCTACACAGCTG
ATGAAGCCAAGATGAAGAGCGGTGGGCTTGGCGGAAAATGGGAATTTGTG
TGCGGGCACGCCCGGTGTCCTGCACCCTATTTCGTAAGAACTCTCTCCTT
GCTCAATTTTTTTACTAGGGTAGAACTCTCTTCTCGCTCAATGTTTAAGC
TAAAAATCTATATTATTCAATAGGCGGGATCGCGATGCGACAAGGATTTC
TGGTTTCAAGACCAAAGACAGTACGAAGTTTACTGGTATGGAGAAAAATA
TGTGCAGAAAAAAGAGGCCAAGGAACTAGAGGAGAAAAGAAAGAGAGAGC
ACAGACAGCACAACCAGAAAGCGTTCGAGGAATGGTGTGCTAAAAAGATG
GCCAACAAACGAAACAATTAGGATGAGTACGAAAATTGCTAGACACTCGT
ATTTCCTTTTAATTTAGTTTCCATTTCAAAATGGTACTCTTGTATCTTTG
ATTTAGAGGGGTCAATTGTTTCCATTCCCCGAGCAGCAACAGTAGCAACA
AATAAATTGTACCGTCTAGCAATTTATCATCATTTCGTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.