Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA003366

[Submit comment/correction]

Sequence	AA003366
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA003366
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	GAAATGATATTAGCACCACATCTTCTGTGAATGTTTGGGCAGAAGAACAA ACATTGAAATATTCTCTTGGCAACAATATGTTGCCTTCATCAGCCACAAG AACTACTTCCTCCATGGCTGGCCCCGTTTCTCTTAGCAACCTCAACCACT ACCCTGACAGCCAGCGTTCCTGTTTTACTACCTCAAAACTAATCCATGAC AATCCCCATAAATACAACCATTCCCCCAAAATTCCTAGGCGGTCTCTTGT CTTGCTCCCTGCCTCCTCTTTTCTCCTCTCCATTTCCCCCTCCTTTGCCA TAGATGATGGAAATGCTCCGTCCACCTCTACAATTGATACAACCATTACT GATCGCATATTCATGGACTTCAGCATCTGCCCAAGCTACTTTACCTCTGA CCGCACGTTAGGAGCTGAACTCTCTTCATGCCCTGATTCTGAACCTATTG GCCGTTTAGTCTTTGGTCTCTATGGTCGGCTACTCCCCATCACTACTGCC AACTTCAAAGCTACTTGCACAGCTTCTGCATATCGAGGCACGCTTGTCCA CAAGCTCCGTCAAGGTCAGTTCTTTGCTGCTGGCCGCCAAGGTCCTCAGC GTGATAAGGGTGTGGTCCAACCTCCCTCAAGGCTTATGAGCAATGCTGAG ACTGTTGACCCTAAAGCATATCAACTGAGACATTTAAGGCCTGGCACCCT ATCCTTGTGCCTTGGACAGAATGACGATGACGATGGCATCAAACTCAACC CCAATTATCACAACGTTGAATTCCTGGTTACTACAGGGCCAGGGCCCTGT CCAGAGCTTGATGGTCAGAACATTGTCTTCGGTACTGTTTTGGAAGGTGA GTACTTCTCCCAGGGTCATTTTTATTAGATGGTATGAGGTATCGCTGGTT TTGTGTTGAATGTCTTGCAGTAATTTGATATCCCCCCTTGATATTTTTAA ATAACATACATAACTTTTGACCAAGCTATGTTATTTGTAATTGGACTAGA CTAATCAACTAATGTAAGGGTTGGTATGACTAAGAGAAAAATGTAGTATT CCCAGAGTAGGATTTCTAAACATGAACCTTCCAGGTGATAATACTGGTGC AAGCTTTGTTTACAAATCATCTGTGCATCTCATAGTTTTTCAGAAAAGCG TACATACCATTAATGAATGAATCAATGTAGTTCTTCCCGACAGCGAGCCA TGACATCTCATCTTTTCTCCATACGTCTTGGCAATACCTTGTGGTTTATC CCTGTGATTTGTAGATTCTAGGGATTAGGGTGGACGATCAGCATTGAAGG AACCATACAGATTCTCAGTGAGCTGTTGTTAAATAATTGATTACATCACC CAAACAGAATCTAGTTTTGCTTGGCTAATTTATACATCTCATCTCTATCT TCGACTATATTTTTTCACTCATTAATGTTTTCAGCAACAGTCATGTCCAC GGGTAACTAAAGCACTTTATCCATTAAGTTTTACTGCCCTCTGCCCACAA CAAACCTCATACGCTCCAGCTCCTGTATATGATGTAATTCAGGATGCACA CGCCTGTGCTCATACAATGCACTCTACAAGCACACAATTACTAATTCAGC TGTGTAATGAAGTTGTTTTTCCCTAGTAAGACCTAAAACTACTTATTACT CCTTGTTGCAGTCTTATAACGAGTAAAGAATCTACATTTACTTTCCCCTT TCTCTGTTGGCGAACCATTTACCAAGAACTTATGTTCTCTAACATGCATT CACCTCAAAACACATGCATGCATATGTGTTCAAATTTATCGAATAGTACT CTCCAAACCAGGCCCAGCTTGAGAAGATCATGGCCATGCAAAATACCGCG CCAGGTAAAAGATCCCCGCTCAGGGCAGCCAGCGTGCAGCAAATGTGCAG GTCTGGACAAGCAGCTGGATACCCAGGGCTGGAGCACAGCAGACTGCTGG GTCGTAAACCTCATGCTCCATTGGACCCTGTTAAAACCGTGTGGCACCTG TTGTCTGAGACGGGCTCAGGTGGAATGAACAGAAGCTGGCGCAGTACATG TATGATTTTGACGTCGCTGACATCCTCAAAATCTCAGTGGGTGGCCCAGG TGTGGAGGACAATTACGCGTGCAACTTTACCAAAAGCGGGGTGTTCTCGG TTCGCTCTGCCTTCCATCTGAAGATGCAGCAGAAGAGTTTGGCATGCTGA AGCAGATTGCAGCACGTGGGCTGGTGACCTCTGTCACCCTATACGCGGAT GACGTGGTGATCTTCTGCCACCTGGATGAGGTGGAGCTGTGCACAGTCCG CGCGCTGTTGGACCTCTTCGGGGAGGCATCTAGATTACACACCAACTACG CCAAGTGCTCTTTCTCCCCGATCGCCTGTCTGACTGAGGATGCGCTTCAT GCGGCAGCGTTCATGGAGTGCCAGGTGGCACCCTTCCCTGTCAGGTACCT GGGGATCCCTCTGTCGCTTCGACGGGTATCCGCAGCTGCCCTCCTACCCC TGGTGGACAGTATCGCGAACCGTCTACCTACCTGGAAGGCTGGGATGATG ACAAAGGCCGGGCGTCTTGCTCTGATCAAGTCGGTTCTCATGGCGATCCC GCTGCACCAGGTCATCGTGTTGGGGCTTAACAAACAGACGCTCAAACAGA TCCAACGGATAGTGCAGAGCTTTCTGTGGGCTGGGAGGGCGAACGCTAAT GGTGGGCACTGCCACGTGAACTGGGACAAGGTGAGCGGGCCGAAGTGCTT CTGCGGCTTAGGGGTTCCTGACCTTTCTCGCATGGCTATCAGTCTGCGGA CTCGTTGGATCTAGAGGATGCGCACCGACCTGCTGCGACCCTGGCGCGGC TTGGACATGCACTTCTCCAAGACCAAGCTCCATGTGTTTGACGCCTCCAC CAGGATGCAGGTGGGTAATGGAGCCACAGCTCTATTCTGGATGGATAGAT GGTTAGAGGGGAATACCATCGGTGAGATAGCGCCTGAGCTCTTCGCGCTG ATCCCCAAGCGTGCTAGGAAGCGCCGCACGGTGAGGGAGGCTCTGGAGGA GCGCCGGTGGATCGCGGACATCCAGGGCGCGATCAACCCGCTCGCCCTAT GGCAGTATATCCAGCTCTGGACTACGCGCTGGTGGATGCGCCAGACTCCT TGCTTTGGAGATGGACCAGAGATGCTCAATACTCCGCCAAATCTTGCTAT GAGTTTCTCTTTCAGGGATCCATCACCTCGCGATCCTGGAAGTTGAACTG GTAGGCTTGGGCGCCCACACGGGTGAAGTTCTTTATCTGGCTGGCCTGTC AGGATCGCTGTTGGACGGCTGAGCGGCTAGTGAGGCGGGGCCTTGCCCAC CCTCCATGTTGCCCTTTGTGTGACCAATCAGCTGAGACCATGACTCACCT CCTGGTTGGCTGCCGCTTCTCCAAGGCGGCGTGGCATGAGGTGCTTTCTT GGATCCAATCCACGGCAACCCCCCGGATGGGGAAGACGACTTCGTGGATT GGTGGCTGCAGGCGTCAAGATCTACCCCCCGTGCTCTTCACAATGGGACT TCCTTGCTCGTAATGCTGATGACGTTGTGGATTTGGAGGCAGAGGAACAC GGTGGTGTTCGACAACGCGGCACCCAACCTGGGTGATCTTCTTGATACAA TTCGGTCTGAGGCTAGGGCTTGGGCTGCTGCTGGTGCGATTGGCCTACGT GCCTTGATCCCCATAGCCCTGTAGATCTAGTGGGTAGAGTTGTATGGGTG TTGGCTCTTGGCGAGCCTGTGTATATGCTATACAGAACTCCTTTTCTATC AACGAATCGAAACGCAAGGCTTTTGCGTTTTCGCGAAAAAAAGTAAAGTT TTAAACAATATCTTAATGATTTTATTGACAATGCTGGTGATCCAGAAATG CAAGCAATATTCAGGTTTATAGAATCCCATTAGGAAATTAACAAGAGAAG ATACTGAAAATACCACTTTACTCTTTAGGGTGTGTACAATCGTAAACGTT TATATGGGCGCTTATAGGGAGGGAAAAAAGGAACATAATGCCAGCATCCA CGATAATAGTTTGTTGCTGCAACGGGAATCGCTAATCGAGGCGCTTATCT AGATTTGTTTTTTATGGTGCCATTGCTAAAATAATAATTTGTACGGAGAT AAATGCGGAGCGTCCTAAGGAAAGACTTAGCAGCGATGCTAACCAATATC CTAGGATCGGCAGGGAATTGGGTCTAACAGCGAGGAATTTGACCATAGTG TCTCTCGTTGGCGGTCATCTCTGACCACTGCCCCTTGCTCCTGGACTGTA CACCGGTGGTTGCCGGGAGAGGTCAGTTCCAGTTTGAGCATTTCTGGATG AAATTGGAAGGCTTTGATGAGGTGGTGGCGTCGGCTTGGGAGACCATTGA TGGGGACCTAGACCCCTTCGGGAGACTCGTCGTGAAGCTCAAGCGTACTG CACGTGCGCTCATGAGCTGGGCGGATAAGAAGGTGGGTTCGGTCAAACTG CAGCTATCCCTAGCGCCGGTGATCATGTACCATCTTGACGTTGCCATGGA GTGTCGACCTCTTTCGTCGGATGAGCGCGCTCTACGCACGAAGCCGAAAT ACACCTACATTGGGCTAGCCTCCTTGGAGCGCACGATGGCGTGCCAAAGA GCCAAGATAGGGTGGTTGAGTGAAGGTGACGCCAACACAACTTTCTTCCA CCAGCATGCATCCTATTGCCGACAGAAGAATGTGATTCGTAGCATACAGG TCGATGGCGCGTTTGTGGTTGACCATGCAGCCATGGCGGAGGCCACGTAT AATCACTTCCAGGGCTTGCTCGGTACGAGTGTAGAGCACCAGCTCTCCTT GGACCTGGACTTTCTGGGATCCATTTCAGAGGACCTGTCGGATCTGGATG CCCCCTTTTCGGAGGAGGTGTGGGAGGTGATCAGGTGACTGCCTCATGGC AAGGCGCCTGGCCCGAGTGTTTTCACGGCAGAGTTCCTCCAGAGCTGTTG GGGGGTGGTCAAAGCGGACTTCATGGCCACCTTTACCAAGTTGCACTTTA TGAATGGGCACGGTTTCCAAGGTCTTAACCAAACCCTGGTCATATTGCTG CCCAAGCGCAGTGATGCAGCCGCTCTAGGTGACTACATGCCGATTAGCCT AATCCACATCTTTGCCAAACTTGGCGTGAAGGTGTTGGCATCAAGGCTGG CTCCTTGACTAGGAGCCCTGGTTGACCTGAACCAATGCGCATTCATCCAG AAGCGTTGCACTCATGATAACTTCATGTTTGTTCAACAAACAACATGCCT ACTCCACCGGTAAAAGGAGTCGAGGGTCATGCTCAAGCTAGATATTGCTA AGGCCTTTGATTCTGTCTCCTGGGCGTTGTTGCTTGAGGTGCTGTGGAAG GTAGGGTTTGGACCTAGATTTCGTGAACTGCTGGCCATTCTACTCTCGAC GACAAGCACCAAGGTGATTCTCAATGGCGAGCTAGGACCCCCGATCTGGC ATCGGAGGGGACTGAGACAGGGAGACCCCTTGTCGCCAATGTTGTTCGTG CTTTTCATCAACACGCTCAACAAGGTGATGGCTAAGGCCTTGGAGTTCGG GATGCTGAAGCGCATCCCATCCCGGGAGTTGGTGACGTCGGTCTCTCTCT ACGCGGACGACGTGGTGATTTTCTGTCACTCGTATGAGGTGGAGATGCGC ACGTTGCGCACACTGCTGACCCTCTTTGGGGAGGCATCTGGGTTGCATAC CAACTATGCCAAGTGCTCGGTCTCTCCGATCGCTTGCTCGGACGAGGAGG CCCTGCAAGTGGCGGCGGTGTTGGGATGTTAGATAGCGCATTTCTCCGTC AGATACCTGGGTATTCCTCTGTCGCTGCGACGATTGTCCGCGACAGCGTT GCAGCCCCTCGTTGACAGCATTGCTAGCCGGCTGCCTACATGGAAAGCAT CGATGATGGCAAAGGCGGGGAACCTAGCGCTTATCTGATCGGTGCTCATG GCGATCCCCCTACACCACATCATTGTGCCGGGGCTTAACAAGCACACGCT CATACAGATCTAGAAGATACTGAGAAGCTTCTTGTGGGTTGGGAGAGCAC AAGCTAAGGGTGGAAACTGCCACGTTAATTGGGATAAGGTGTGCAGGCCG AAGTGCTTTGGCGGCATAGGGGTGCCTGATCTGACTAGGATGGCGATCAG CCTTCGGACCCGTTGGATCTGTAGGATGCGCACGAATCACGCGCGGCCCT GGCAGGGGTTGGACATGCGCTTCTCTCAGACGGAGATGCAGGTATTCGAG GCTTCCACTTTGATGACAGTGGGTGATGGAGCTACAACTTTGTTCTGGAC GGACCGTTGGCTCGACGGGAAGACCATCGAGGGGTGGGCACCGGCGCTCT TCTCGCTGATTCCCAAACGCGCTAGGAAGCGCCGCACGGTGAGAGAGGCT CTGCTGGAGCGCCGTTGGATTACAGACATTCAGGGTGCGCTAAGTCCTCT TGCCCTATGGCAGTATGCCCAGTTGTGGGCTAGATTACGGGTCGTCGAGC TTGTGGAGGAACCGGACACCCTGCGCTGGAGGTGGACGACGGATGCCTTC TACTCTGCGAAGTCCTGTTATGAGTTCCTCTTCCAAGGATCCATCACCTC CAGATCCTGAAAGCTGAACTGGCACGTGTGGACACCACCCCGTGACAAGT TCTTTGTGTGGCTTGCCTGCCAAGACCGCTGTTGGACGGCTGAGCGGCTT GCGAGACGGGGTCTAGCACACCCCCAGTGCTGCCCCCTCTGTGACCAAAC GGCTGAGACCATGACTCACCTCTTGGTAGGTTCCCCTTCTCCCGGGCGAC TTGGCACGAGGTGTTTTCCTGGATTCGATCGACGGCCACACCGCCGGATG AAGACGACTTCGTGGATTGGTGGTTGCAGGCTTCCTTAGCTACCCCCCGG GCTTTGCAGAAGGGGACGTCCTCGCTCATCATGCTGACGGCTTGGTGGAT TTGGAAGCATCGCAACACGGTTGTCTTTGACAATGCGTCACCCAACCTAG GTAGTCTTCTCGACACGATTCACTCCGAGGCTCGATCTTGGGCGGCTGCA GGTGTGCTCGGACTATGTGCCTTGCTACCCGTGGCCCCGTAGGTCTAGTG GGTTGAGTTGTGAGAGGTGTTGGCTCGGCTGAGCTTGTATATGCTGTAGA GTAACTCTTTTTCTATCAATGAATCGAAACGCAATGCTTTTTGCATTTTC GCGAAAATAAACGCCCCGTTGTACATGCCCTTATAGGTTATGTTAACTAA CTATCTTAGAATGAACCATTTTGCTATGTAGCCTCTTGCTTTGTTTTCTC TTTCTGCTTTGTCAAACTACTTTCTGCAAGATAAGTCGGCGGAAAAAATG TCGTTTTTATAGTTTATCGAGTGCACTGTTCTGTCTTAGCAATCATGAAA CATGTGCTGCAAGTATACAACTTGTCAATTTGAACAGAAAAATTCTTGTG AAATGATTATAGCCTCTTTCTGAAGTATTGCTGGTAATATTAGTAACAAA CTGCTCCCTACACAAGTTCTGGAATTTTCCTTTACTGTGCCTCTTTCCTC ACATTAGTGAGACACAAAACATGCTCATTCTATCGTCACAAAACATGTTA AGAATTGCGAACAGACTAAGTGTAAATTATAGTGGGATATGCGAAGGTTG CCATTACTATGTTCATGAGCCTGTTTTTTCATGAGAAAATGACACAATGA ACATAAAAAAGTCAACTAATAAGCGGTGAAAGATATATTTCTAAATAATT CTTTCATTGAAGACATAGGGACCAAACATTGCTGCGTTGTGTTGTCTTGC TCTGATATGTAGTTGAGTAAGGGTGATTTTGATGCACATTTAAGGCCGAT GTTCTCGTGGCACTACATTTTCCTTTTTAGTGGCAGTACGTCCCACATGG ATAGTTATGATTAAGCGTATTTATTTGAATTTAGATGTACGACAACCAAG CGCTGGCTTCGTGGCTTGACCTCACGGTGGTGAGCTCGCCTATCTAGGTT CGAGTTGCTGCTGCGACTGAATTAAGCAGGATGTTATCTAGCACCCGTAT TAGTCCACAACTGAAGAGGTCTCATCTTTTCCGTTAAAAAAAGAGGTCTG ATCTATCTAACAACATATAGCCAAGAGAAGGATCATTCCCCCGTTGGTCA TTGTTTTGAATTTAGATGTATGATGAAAAATGTGAAAACTCTCGCAATAT GTAGAATACGTATTCTATTATGCAATGATGGTAACAATCTGTTACAGGGT ATCTGTCAAAAAGTGCAAATTAATTTACTTCAGCATTTTCTTTTCTGAAA TTGCTTTTGTAAATTATAACCTCTGTGGTGCTGAAGAAACTTTTCCGGAG GCAGTTAATGCCTCTTACCTGTTAATAGTATATATATATTGTATGCCTAC ATGCTGTATTACCCTGCTATATTCACCTCAAACACACATAGTATTTGTTT TCTTACAAACAATTGAGCAAGTTTGTTGGTATCTATACTTTCCTATTATA TGTAATAGTTAATTTTTTTCTTAACTGGACATGCATTCTTTGCAATTTCA CTGAACTTTTCCAATACCCCAGTATATACTGTAAAACACCTTCATGCTCT TTGGTCGCTCTCGATATTACTGAAAGATGGCTGTTGGGAAGAGAATGATG TGTTAATAATTGGTCTTTCCAAGTTTATTTACCTTCTGTTTCTGGTGTTT GCTTCATTCTTTATGTAGGAATGGACGTTATCACCAGCATCGCAACCATC CCCACCTATAAACCGGCTGAAAGGATCCAATTCTTCAATGATTTTGCGCA GCTGATTGGCGATGAAAGAGCTCAATCTGCTAGAGCTATGTGGGATCGCC CACAGAAAACCGTGTATATCAGCGGTTGCGGGGAGCTGAAAGTGGCCAAG CCATCTCTTTCCCCTCCTAGTTTGCCATGATAAATGTTGTACTCCTCTCC CATTGGCCTAAATTTGTCTAAACTCACGACAATTAAATCTGATCGCAGGG AGTAGTATATTTATTGATCATTCCTTGTATAGCT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.