Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA039200

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Sequence	AA039200
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA039200
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGGCAACCGCCGGTCAGCTCCGTGCGCGGCAACTGCCGATCGTGGAGGT CGTGGTCCCTGCTACCTCCAGCAGTACAAAATCCTCAAAGCCTCTCTCCC TACTCTTGTTCTCCTCTCGCCTCCCATCAGCTCTCCCCAATCCGGCGACC GGACCAGCTGCCGCCTCCGGGATACCTCCGAGCGCAGAACCAGTTCGACG TCGCCGACAGTGGCCAGAGCGCAGAACTGGTCCGACTCGCCGACAGTGGC CACGCCGGCCCGCCGTCCATGTTGCTCGTCCCCCACCCGCAATTCAGGAG GTCGTGAACAAGACTTCTCCTTACGCCCCATCTTTGGCCGAACAAGAGTT GGTCTGTTTTACTCCTCGACAACGTCTTCCTGCATTACCCCACACACTGC TTCTGCTTGCTCTTTTGGTTTGATTTGATTGATATTCATTACGTGCAGGT GGTGGTTCCAGGCGTGGTAGCGACTGCAAAGGTACATAAAGGATTTGCAT CCATGTGCTGTGACAAAAATTAGGCTAGACCTCACTAGATTGTAGTCCAT AAGAAGTCTATCATGATGTTGCAGAAGGATCTTTTAATTGGTAGTCGTAA TTTTCCACATGATTTAACCCTGTGTATTTGCGATTCTTATTCTTCTCTGC TAGATGAGGTTATTTCAGTGTATTTAATATCCTAATATCTCCTCTATTCA CTCCATGAACAATGCATATGCCTTAAGCCAGTTTAGCTTGTCGATCTTGA AAAATGGGTAAGAAACTCATGAGTCATGAGATGATGGACTGCACCTAGGC ATTGATCAGTTCATCTGATCTTGTCAGCGTTATCTAAAACATATTTCACC CTGTCATAGGTGTAAGAAAAAACAGATTAAGTAGCAGCCCGTGAAACCAT TATTTACTTGTTTTTGGATTGTCCATGGAGAAATAAAGATGGACGGATTG TATGCAGCTAAATTGCATTTCTTTCCGTCCCTGCATTGTGTTCATCCTAG AATTTTTGTAGGTTCCGATGTGTACTTCTTGATTTTTGAGTGAAGCAACC TTTGCATGAACAGATCAGAAAAACTATACTTGTAGAGGTCAATTATTCTA TGGTACTGAATTGTTCTGGCATGAATATAAATTTGCTTGTATTTATTATT TGGTGGCATTTTATCAGAACACAAATTCATACGAATCTTTGCTATTAACT GATTGTATACGTGAGTATGGTTTCAAAATTGTTTCGAGGAAAAAAACACG TGCAACGATTTTGTTCATGATTGCTTGGTTTTTGCATGATTACATCCCTG GAATTTGGGAGTGTGCATTATAGTTGCATCGAGGTGAATAGCTCGTGTAT TGCCTTTGAGAAAATGCATTGGCTCACATGCACGGTGAACCACCAGATCA AGGGATCCAAAGGAAGCAATATTACTTAAAGTTCATCTCTACTGATGGTA GTTTTATGTAATAAAATTATAGTTGAAATTTCATATTCCGTGTAAGGAAA CATCCTATTGTTTTAGAGGAAAAAAACACCTAAACCAAGATTTGCATTTC CTATGTTCACGATACATGGTACACGGGACAATTACTAAAATGTCTTCTTT TCTTTTCAGCATGGCGCCTGGGGTTATGGATTCCAAATTCTAATTCTTTA TAAAAGTGTTTCCAAGCACTCCATTTGTGAAACTTCTACGAAATTCTTTA TAAAGGCGTGCCTCCATCCTATCCCCTCCATCACCGGAGCCAGACAAAGC TTGTCGTAAAAGAGGGCGAAGCTTTTTACTGATATAGAGCTGCAGGTCAG GTCATACCGACGACCTTTCACATATAGTCTCGTAGTTCCTATATATGCTT ATGTATATGCTTTCTTGTTCCTGTATATGCTTTCTGCCTATAGTTTTTCT TAATTTTTCTCCCACAATTTTTTTGAACTGCTGCTAAGATGAATGTCTTT ATTTGTGGTACACACCTTAGAAAGAAGAGGACATATATGTACTTCACGGA AACCCGTTTTCATGCTTTATTTTCTTAGTGTGACTCTATAGCACATTCCA TACCCATCAATATTGACTATATTTTAGCTTCTCGTATTACAGTTTCTTCT CCGTATATCTTTTCTCATAAGTACTGAATATAAGCAGGGTTGGATGAGAA TACCCTTAAACTGAGCATGAATGCTTAGTTTGCTTCACATGACCTTACAA TCTTTCTTCTAGATTTTGGAAGGAAATTTCTTGATAATAAATATATAAAT ATTTTTATTGGATTTTTTAGTTCTTTCTTTCCATGATAGACATGCTATTG TCAGCATCTAACTACATGCTCTGAATAAATTTGTATTCAAGTAAAAACCA TAGTACTAGCTAGGTAACTAGAAACTATATTGTTGGTATCCCTTTAGAGA TCTGTTTGATTGGAGTTCATGTGTGCACTTTTTATAATATGGGGATCCTT AAATCGAATTAGCATGTAGTTAGTATGTATGTTCCTGAATATTTTTTTAT TTCATGTCTGTAGGCCACACCATTACTCTTGACTCTGTTTTTTCTGGAAA ATAAAGAGGGCCAAGGTTTTTACCCATTTGACAGAGAGTTGCAGGTCAGC TCATGTTGATTATCTTTCCCATATAGTCATGTGGTTCCTATTTCTGGTTA TTTTATCCTGGTAATCTTGCTCCTGTATGTGCTCTCTGTCTACAGTTCTT CTTCATTTGCCTTCCACAAATTTTTTAACTACTTCTTAGATGAATGTCTT TGGTTGTGGTACACACTTGTGGTAATGTGCTAATGTCCAATTTTCATGCG ATTCTAGGGACGATAAGATTCTCATGGCAGTGCGCAACCATTAAAACTTC AGTATCTTTTTTATGTAGATGACACCCATTAAGCTCATAAATAAGAGGAC ATATGCGGCCTTGACAGAAACTCCACGGCCACCTAGGTTAGTTTAAATTA CCTTCTCATCATGAATATAATATAGTACTAGCCATCTTACACTGATTACT ATAGATTTAAGGATTTTGATGACATTGAGTTTGGTGATACCATCTCAAAG TGGAGCATTTGTGTGAGGATAGAAGTGAAGTTTGCGCCTAATAAATATGG TGACAACATTCGTTTTGTTCTTATGGATAAAACTGTAAGTTCCAAAAACT CTTGATAAATTTACTAAAATGTGATCATGTGTTTTAACTCAATCTTATAC TTTTTATGCTCAAACACATTCAAGGGGGCAAAAATAGAAGCAAGCGTTTG GGGATTTGATGAAGTAGCACGATTCAACCGGATACTGCAACCTGGTTGCA AATATACCATCCATAGGGTTATAATTAGTCCTAACGCGGAATCTGTCGAG TTTAGAGCGATTGGACACCCGTATGAATGCCATTTTAATCGAATAACAAT GGTTGAGCCCTCTCTGTTTATTGAGTTCCCAATACTCCCAAAGCATCTGA TGCCATTTTCGGATGTAGCCAAGCGTCCAAACAAAACCTTTGTAGGTATG TTCCATATATGCTTTGCCTATACAACTGTGACCAATACAATTTCAGCATT CCAAATTGACCAATGAATTTTTTTATAGATATAGTTGGCATAGTTGTTCA CTGTTGTGACCATGACCATTTTGGGAGGTATGGAAAGTATAAGGAAGCTA TCTTCATGGATGTGTGGTATGTTAAGTAGTAAATATAAACAACACCAACT ATTTTATGACATCTTTATTGTAAAGATATTTTCCTTTCAAAAAAGTTGTG AAAACTTTGATTTGTAGGGGAAATCTTATTCCCGTTGGCATTTGGGGTTT ACAATTGACTCGGAACTCATACCTATGGTCTACGGCTGAAGGTGGCAACC CTATTGTCATTGCAACCATGTTGGAGAAAGATATTAAATTTGGTAATTGA TTTATCTACATCACCACATACTTTATATTTTAACTTATTTTATTGATACA CCGGGGTAATTATATTTTTTTTAACATAACAATAGGTGACCTGAATACAT CAGACCATACAAATGTTGCATTCAACCCAGCTCATACTGCAGCACGCCCT CTCCATGGTGAGTTAATTTAACAAAACACTAAGTTACAAATTTTTTAATA AACCTATTGGGGTTAGTATAATATATGCATATTAAATTCAAATGTAAACA TGCAGATATCCGCCAAAAAATAATTAGTGGAGCAATTGACATGACCTTCG TGCAAAGTTTTGTTGAGAGGAGGTGGGCCTTCGTGTCAATGGTGCTGGCT AAAAGAGATGCACGCTGCAGGAAGTAGATGTGGTTGGATTATCTGTTCGC TGTTGTAATTTAGGCAAGCTACATGCTATATAATTTCCGTGTGTACTGTA ATTCGGTGATAAAACGGAATTTTCAAAGTACTTTGTATTCTGTCTGTTCA ATTTTTTTTGTTTAAACGAACATATTGTGTGAAGGCTTGTATGTATCAAT ACTGTTCCATTGAAGTTTATGTGATTTCTTGGTCTTATCTATACAAACAT AGTAACCTTAAATCTTAAAGGTTTCTGCGCATAAAATTTGTTCAAGCTTC CCAGCAAGTACGGTGATTTCCATATTGACTTTCCTGTATTTGCCCTGCTA CATATACTATGTAGTAGAGATTATTATGGATACGGTCGTACTCTGTGATC TCATATTTCGGTGGCAGTTTTCTTAGTATAAACAAAACCATAGCTGAACA CACGATCTCGACTAGATGCGAAACAGGTTCGTGAATCCAGTTAGCAATCA GTAAACATATTTGTTCCGTGAAAACTAAACATGCACAAATGCAATCAAAA GACAGATTGATTCTTGCAAAATTGTTTCACTCCATCTTTTGCCGTAAACT TATTTGAGAAAAAAAATTCCCTTGTATGCTATAGTAATAGTAGCTTACGC AATTGTTGCAAATAGATAGTTTCAGATGGTACTTTTTACTATTGTCCCTA TCTGTATAGTTAAGCAACATTGAACTATCAGAAAGTTCAATTACCTGAAA CTCGGTTACTTTGAAGCAACAGTACAAATAAGACAGAAGGTTATTGGGAT CTAATGTAAAGAGAGGAAGCATATGGAAACCAACAAGTAAGTGAAACCGT TGCCTTCAGGCAATATATCTTTTCCTGTTGCCGAGGATTAGATTACAGAA GTGTTGCAAAGATGTCGCATCCAAACCAACCATCACGCAAAGGAAAAGAA GGTTACAATATGCTATCCCTTTAATATTAATTAGACCAAAATATGCCCCT TCACATTGAACTAATTGACTTTAATGTGGTTTGTGTTTTTTTCTTATTGA TCGACCAGTTGTTCATGAGCATCATGCTTCCAAGCAATCCCGCACCAGTT ATGTGCCACGTCCTCCTACTGGGTTCTACATACGTGAACCTTCGAACACT TCAGTTATTTCATCGTCCGATGAAGAAGAGGGGCACACTGAATTTCATAC TCCGTACACAACTGACTTTCAAAGCAACCTTACCAACACCATGATACTAC CGGGCGAAGGTTCAAATGGTATACCCTTTTACTGGTAGCACAATATAATG TTATCAGACACTTTCATGCCTTATTATTTTTGTAACTGGGGTACACCATA CAGGTAGTAAACATGTCAATGATGTCATGGGAATTTCAACTACGGTGATG GTAGACCAAATGCAACCGATTGCAAGCATTTCAGAACAAAGAAATCGAGC AAGACGTGAACGAGATAGAGCTCGACGAAATAACTTGACAACCGAGCAAA AGAAGGAGATTTGTGCACGTAGAAGAGAAGCTCGGAAAAACAAAGTGCTG ACGGCTGAGCAAAAGGAGGAGATTAATGCAAGTAGAAGAGAAGCCTGGAA AAACAAACCTCTCGATGAGAGGAATGCACGACAAAGGGCTAAAAGGCAAA ATATCTCTGCCGAAGAGAGGCAAGATATGAATGCCAACAGATCCGCACGC ATGCAGAGCATACCTGGACAAAAGAGGGAGTCTTTGCTAGCTAAGCGCAA GGCAAACGCCACGGCTAGGCTGAACACCCCTTGCACTGAATCCATCGCAA TGCCATGCCCAAATGCAACTGCTTTGGGAAAGTTAAACCTAGCCAAAGAG GGAGCTGCTTCACCAACTGCCCCCTGTTCAGGAAGCACATCGGACTTCAC CATTGGAAGCAACGGTGATTCTCCCATCTTTACTCCACCTCATTTGTTAA TGTATTTAGCAAACCATTACTTACATGGCTCGAAAACGTTACAGATGAGA TGGAGGCCCTCCTTAGTAGGCTCATGGACGAGAATGCTATCCCTGATGAC CTGATGGATGAGGAGTACTACCTATACGATGTTGAATGTATGTTCACAAG TCTCTCCACTTGCCCTCTTTGTTACGAGTTTAGATGTCTACCCTGTTGTG ACACATTATGCATGTAGGTTCTGACACGTTCGACACGGAACTAGATGAAC CATCTGACTTTTCCAGGACGAGCTCTGTTGATCCTTTTGACTTTGTGTAC TCAAACCTCCCAGAAAGCACACATATTTTGGAGAAAGTCCCAAATTGCAA ATTCTGCAATGCCAATAGGTTTGAGCGTGAGCCCCCTGCTTTCTGTTGTC TCAATGGGGATATCAAGTTGTCTGAACAAGAACCTATCCCGGAGCTGATG AGGTTATGGTCGAGCATAGATGCGGACCGCCGGCATTTTCGGGACAACAT CCGATTCTTCAACAGACACTTCTCCTTCACAACGCTCGGCGTAACCCTTG ACAACAGTTGCACCAATATGAGCTCCGGGGTTTAAACATTTCGGGCAAGC GGCTCGGTGTACCACAATGTCCATTCGTTTGGGCCAGGCTCTCGTCCTGA TCATCTACAGTTGTACTTCTACGATGATGATCCTAGCCTGATTCATCGCA AGGAAGCCACCGAGCAACTGGACCAGGAGGTTGTTCGGAAATTGACGAAC ATCATGAGAGCAAACCCTTACTCCCAACAATTAAGGAGTTTGGGTGCAAA CAGGGACAACCTCCAGGATTATAGGATAGAACTAAACACCGATCAGAAGC TAGACCAACGAACATATAATCTACCAATCTCGTCTGAGGTGGCTACCATC TGGGTCGAGGGGAGCGACCTGGCGAATAGGTTCAAACGCAGCATTACCCT CTACGGGAACAACAATGAGAGGTACAGCATACAGGCCACACAGGGGTGCT ACGACCCTCTCTCGTACCCCCTCTTCTTCCCCAAGGGGGAACTCGGCTGG CATCCGAATATCCCCAAAGCTAAGGTGTCTTGGGACGTTGCGCAACTACC AAGAGCGAACCGTGATGCCGGTGGAGGTTCGTCTATTTCAGACGCTTGTG CATTTATTTGGAGAACACATCATTGTATCACGTTACCTAACCTTCATTTT TTTGCATCCTTCTCGCAGAGGGGGGTGGCCGTTTATGCGTCTCCGTCAAG GACTATTATTGTTATAGGCTACAGACGCGTCCTGGAATATTTAACCCCAT ATTGCATGGAGGGCGCCTATTCCAACAATGGGGTGTCGACATGTACATCA AGATCGAGGGCTGCAGGTTAAAATGGATCAGGGACCACCAACCGGAGATA CGTGCCGACTTATATAAAGGCATTGTCGATAGCATCACAGCCGGAGAGAC ACGAGCGAGCGCTGTTGGCACTAGGACTGTTTTGCCGCACACGTTCAAAG GGGGCTACCGAGACATGAAGCGAAGGCATATGGATGCCATGGCACTGGTC CACACTTATGGCAAGCCTGACATCTTCCTAACAATGACATGCAACCCAAA CTGGCAGGAGATACAGGATGAGTTGTTTCCCGGTCAATCTCCGCAGGATC GGCCTGATCTTGTGGCCCGAGTGTTCAGAGCCAAGCTAGAGAAGATGAAA GAGATGTTGACCAAGGATCATATCCTGGGCGTTGTGAAGGCGTATGTCTA TGTGGTAGAGTTCCGGAAAAGGGGTCTGCCGCATGCCCATTTCTTATTGA TCATGGATTCTAGATATAAGCTTGTTGTGCCAGAACAGTACGATCGTGTC ATATCCGCCGAGCTCCCTGACAAGCATAAGTACCCAGAGCTATACCCCAT GGTCGTGAAGCATATGATGCATGGCCCATGTGGTGTCCTGAGGCCCAACA ATGTGTGCATGCAAGAGGGGTCATGCAAGTGCAAGTACCCCCGAGAGTTC AACGATACCACCGTACAAGGAAAGGACTCCTACCCTGTTTATCGGAGACG GAAAGATGGTCATTCAGCAAAGGTCCGTGGTCAGATGTTGGACAATAGAT GGGTTGTGCCATACAACCCTCGCCTCCTTCGTATGTTCAACTGCCACATC AACGTGGAGGTGTGCTCTAGCATAAAGGCCGTCAAGTACCTATACAAGTA CATATACAAGGGCCACGATCAGACTTCTTTCAATATCGACCAACCCGACG CCGAAGGTAACATAGACGAGATCAAGAGATTCGTTGATGCGAGGTGGGTT ACTCCTCCGGAAGCGATGTGGAGGATATTTGGCTTCACCCTGTCTGAGAA CTACCCCCCGGTTCTACAACTTCCGCTACATCTCCCAAACATGCATAGAG TCACATTCAAAGCAGGGGATGACCTGAACGATGTTCTTGCAAGCGAGAAT GCATCGAAGTCTATGCTAACGGAGTATTTTGTGGCTAACCAGGAGCATGC TTGGGCTCGAGATATTCTGTACAAGGACTTTCCAGGAAGTTTCACGTGGC AACGATTAAAATTTTGGCAAAAAAGGAAAAACAGTTGTTTCCAAGTAGGC AGAATCGTGTCAGCCAACCCTGCTGAGGGGGAGAGGTACTTTCTGAGGGT GCTTCTAAACCACGTAGCAGGCTCACAGTCCTTTGAAGACCTGAAAACCG TGGATGGTGTGCTATGTGGCACCTTTCGGGAGGCCGCTGAGAGGAGGGGT CTCATTGAGGCCGACAACACACTTGACGAGTGTCTTACGGAGTCAGCGCA GTGGGCCATGCCCGTCTCTCTCAGGAGGCTCTTCGCAACGATCTTGGTAT TCTGTGAGCCTGGCGACGTGCGCGGCCTATGGGATAGGCACCTTGAAGCG ATGTCTGACGACTTCAGGAGAAATCACACGTTCCCTATAGCGGTGGAGCA GAAGGTGTTGCTTGACATCAGGGGTATGCTACAGTCCATGGGCAAAGACA TAAAGTTGTTCCCTCTTCCGGACATCGACGAGACATATGACAACACAGAA GGCGAGGCGAGGGAGGTCATCGAGGAAACCACTATAAAGATTGATGATGA TGACAAGTCTCTAGCTGACTTGCTAAACCGCGAGCAGATGCTAGCATACA AAGAGATATTGGAGGCACTCGACAGTGACAATGGGGGAGTATTTTTTGTC GATGGCCCAGGAGGCACCGGGAAGACTTTCCTGTATAGGGCATTGCTCGC TAGGGTTCAAGGCGAAAGGAAGATAGCTGTGGCCATAGCAACTTCCGGTG TCGCCGCTTCCATCATGCCTGGAGGCAGGACCGCCCACTCTAGATTCAAG ATCCCACATAACATTCAGGACGACTCATCATGCAACTTCACCAAGCAAAG TGGGACAGCCAAGCTCCTGAGGATGGCTTCGCTCATACTATGGGACGAGG CCACCATGACAAAGCGGCAGGCAGTCGAGGCACTGGACAACAACATGCGT GACATCATGGGACGACGGGACCGACCTTTCGGGGGGAAGACCGTCGTGTT TAGTGGGGACTTCAGGCAGGTGCTTCCGGTAGTCAGGAAAGGGTCACGGG GTCAGATAGTCGACGCGACTTTGCGGAGTTCATACCTCTGGCAGGGCATG CGCCAGCTAAAGCTCGTCCGCAACATGAGGGCGCATAATGACCGTTGGTT TGCAGATTACCTATTGAGGGTAGGTAATGGCACCGAGGAAACTGATGAGG AAGGGAACATCCGGCTCCCTGAAGATATATGTGTGCCTTCCACCGACGAG GTCGCCGACATAGAGAAGCTAATAGACCATGTGTTTCCTGCCCTAGACCA CCACATGACCGATCCGGATTACATGATGTCTCGAGCAATACTCTCCACGA AGAACGACAACATCGATGTAATAAACATGCGTATGATAGAGCGTTTTCAG GGAGAGGAGAATATCTACCATAGCTTTGACAGCGCAGAAGACGATCCACA TGGCTACTATGCACCTGAGTTCCTGAATGATCTGACTCCTAATGGGCTAC CCCCGCACGCACTTAAGCTTAAGATAAACTGCCCCATTATGCTGCTTAGG AACATCGACCCAGCAAACAGTCTGTGTAATGGCACAAGGCTTGTGGTTCG TGGGTTCAAGAGGAATGCTATCGACGCAGAAATCGTGTTGGGTCAACACG CTGGACGAAGGGTGTTTCTTCCTCGAATACCACTCTGCCCCTCTGACGAC GAAATGTTCCCTTTCAGATTCAAGAGGAAGCAGTTTCCAGTTAGACTCAG TTTTGCCATGACAATCTATAAGGCGCAAGGGCAGACCATCCCGGTTGTTG GCGTGTACCTACCAGAAGCCGTATTCTCACATGGTCAGCTCTATGTGGCG CTGTCCAGAGCCACCGCAATGAGCAACATTAAGATCCTCGCTGGTAATGA CAAGAGAAAGGACGAGGCCAAGAATTCAAAGAAGCGGAAAAGATCTGAGT CCTTAGTATCGACCACACAAAACATAGTATACAAGGAAGTCCTTAGCGCT TGA

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