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GrainGenes Sequence Report: AA036240

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Sequence
AA036240
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA036240
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGAGCTGCGGTCGGGGCGTCGCCTCAGGTCGGTTTGGTCGCCCGGACC
TCGCCGGCCCCCGGGCTGCACAGACGGAGGCGGATCGGACTGGATCAGAG
CCCTTCCGGATGAAATGCTGCTCCAGATACTCGTTCGCCTCCGCTGTGCC
CGTGCCGCCGCCCTCACGAGCGTCCTTTCCCGCCGGTGGCGCGGCCTCTG
GAGGAACCTCCCGGAGCTCTCTTTCCGCGAGATATCGCCGGACGCGCTGG
ACGCCGCACTGGACCAGGTCGCCTACCCAGATCTGTCCTTCCTCAAGATA
GACATCCCAGAGAAGTACAGAATCATGGACCCTACTCGCGTCTTGGCGTT
GCTCCGGGCCGCGGCGCGTCTTGCGCCGGCGGATCTCGTCTTCCATGTTC
GGGGGCACGTTAAAGATAGTAACGTTCCTATCGAGATTCCCTGCTTCGAA
CGCGCCACAGCGGTCAAGCTGCGAGTGGAAAACCTGTATCTGACACCGCC
GGCGGGGGCCGTCGAGTTCCCTGTGCTGGAGAGGCTGTATCTCGCTGGCT
GCCGCTTCGACATGGTTGAGATGATCCAGCGGTGCACTCACTTGCGCGTA
CTAAAGGTGCGCGACTGCTGGGGTTTCGACATTAAAGTGCACTCACCCGG
CCAAGATTGAGGTTCTTGACGTGGACACCTATGGGTGGATGGGGAGCATC
GACATCATGGCCCCAGTGCTTAAGAAGTTTAATTTGTCGACCCACATTCA
CAGGGATTGCAGCATGTCATTCTCAGCACCGATGGTGGAATATATCTCAT
GGGACTGTTCGTATGGATTTGAAAATGTTGGGATTGGTGAATATTGGAGT
CTGCGTAACCTCGGCCTTTGGATGAAGGAGAATATCTGCATCCTAAGGGC
ATGTATATTGCGGACCGCTTGTTTAGACGTTTAAGGCGGTGGTTACCGGG
GCCAAAATTCTTAGCGACCAGACGCGGGTCGAAGGCTCCAACGCGGGTAC
GTAAAAGTAGACGTTTAGATGAACTAGCAAAAATGTCCGTGCGTTGCAAC
GGAGAGAAAAACCTGATAACGATAATACTTTTGACATATGAACCAAACAT
TAAATTCATATATCTCAAAAACTGAAATCGCTCTTCGGTATGTAATGTTG
CACAAGGCAGGGGTTGTGGTTTAAAACGGTGTCGTGGCGAGCGACGCGAG
CACTAAAATCTAATCCTTTCTCATGTTCTTTCTCAGGATTTTTGGATCTT
TTTATTTTGACCAGGTGAACCAACATATTTTGTTAAGATGACAATGTTTC
TCTCAAATTCATTTTTTACAAATTCAACAATTTTCTTCTACAGGCAACAA
AACATTTTTCTTCTATAGAAATATTTCTTCAATTTTATTCAAATCAACAA
TAAACTTATAATTCATTTGTTTGCGTTAGCTAAAAACTTGGGCTTTTCAC
TATGTGACTTGTGGATATGCCAATCAATAGAAATTCTAGCTCTTAACAGA
TCGCACACAATAAAAAAAATGAAGCTTCAAATAGCTCGCATATCTGAATC
GAATAACAACCCTCTGTAACCTCTATAACGGGAATAGCCAGAGCACGTCC
ACGCACACGGCCCCAACCACCTCATCTCGTTCCCCTCCCGAGCGACACCA
ACCCCATCTCCTTCCCGCATCCAGCGCCACCATCCACGCCGCCAGACACG
CCTCCCTAGCCCCCTTTGCCCCGCCACCTCGCCTCAACCTCGAACCTCGA
GCTCCTGCGCCAACATGGCACCGCCCCCCTCTGCGCTCGCCAGCAATCGC
CGCCGCCACCAGTGCGCACGCGGGCGTCCTTCACCTCCGCCGCCGCCAAC
TCTCTACTTCGATCCGGGGCTTGCCAAGCCCGATTCTATCCCCTGACGCC
TCCTCTTATCCCCTGACGCAGGAGCTCTGTTTCCCAACGCATCCGTCTTC
TCCCATGCCTCTCAATAAGCCAAAGTAGCAAAGCTGCGCACTGCTATAGT
TCAGCGCTCCCCGAGCGTTTCTCGCCGTGTCTCGAGCTGGTCCGTTGTTC
CATCTTTATCTCACCATGCTCTGATTAGCTCGCTGATTCCAGGCAACCTA
TAAAAATATATAAACAGGTAAAAATCGTTGTAAAGTAGCAAGGTGGGATT
ATTCAAACTGACTACGGACGACGGACATATGGAATTTACGGGGCAGGCGG
ACGCGGATGCTAATTGGGTTGTATATACTTCTCCATGTTGGTACTGGGCC
GGCCCAGACCCACCGATTGATCCAGAGCAGCGATCGATTAATCTGTGTCG
CGCAAGCGCAAAGAAAATAGGATGAGTGGGTAGTTTATTTCGACGTCTGT
TTTTTATTTAGCGATGGCGTTGGTTGTAATATTGGTTTGGTGAAAGGGTA
AAATCGTCCAAAAAAGTGTTGGACCGGGAGAACACTTCGTGCTTTATTAT
TAGGTATAGATATAGATATATATTAAAGAAATACAAAAGAAGAAGAGAAC
AAGCGGTAAAAAGGCAAGTGCAGGAAAAAACGAGATGAAACGCCCGGCGG
CAGCTTTTGCGTCGACGCTAGGAATTTTTCTCGGATTGAACGGGATTAGC
GGCTAACTACCAGGAAATTAAGCATAGGCGTCCAGTGTTACCACCCGCGG
TGTACTTGCCCTAAGAGCATCTCCACTCGCCTATCCAGGACGCCCGTCCG
GACGCCGAATTTTGGTCCGGACGCCGAAAATCTGCCCAGTCGCGTACCCA
AGGACCTGTTTTCGTCCGGATTTCGGCGTGTTTTGGTCCGGCCTACCCAG
ACCGTACCCAGGATCCCGGGTACGCCCTAGGAACGTCGGACTCAGCGAAA
ATGGGTGTGGGCCAACTTCCAGGAGAGCCAGGCGGCTGCTCGCCAGAGGT
ACTCCTCATCGCCGGAGTTCGACGGCGGCTTCAACCCGAACGTGCTCTTC
CCTTGCCCTGTGCCGCGCCCTCCTTCGGCCTTCGGCGTCGACATCAACCT
CCCCTACTCCACCTCTCCGGCGTACGCAAGCCCCGCTCTTCGCCGCAGTC
CGCTGCCCTTCGGCGCAACCTTCGGCGAGGCCGACGCGCGCAACCTGTTT
GGCGGAATGCCGGGCGCCCTTCCGGTCGGCATGACGGCTGATGCATACAT
GGAGGACCTGATCGCAACAGGCTCAGCCTCCAACCACGCCTCCTTCTTCA
CGGAAGAGCAGACCCGGGCCGACGCCGAGCGCAGCATCGAGTCCCAGGAC
CTCGTCGACGTGGATGCCGAGGAGATCCATGCCGAGCAGACGCAGCCAGA
GGACGTCGAGACTGAGGCGAAAGGCAAGAAGGGGAAGAAGACGGCGGACG
CTCGGCTCAAATGGATCGTGGCCGAGGACACCTGCCTCGCCGAGGCTTGG
AAGACGGTTAGCATGGATCCGATAACGGGTGCGAACCAAAATTCTGACAA
TTATTGGCGACGCGTGAAGGCAGCATTCGACGAGCGAAGCCTGTGCGACC
CAAAGTATCGCAAGATCCACATGGAGCGAGGGGAGAAGGCAATAACGAAC
CACTGAGCAATCATCCAAACAACGTGCAGCAAGTGGCACAGCTGCGTGGA
AGAAGTCGACCGCACACAAGCCAGTGGGGAGAACATGGGCAACAAGGTAC
TCTCGAACGTTAACTTTGTCGTGCACTCTTTTGACACACTCGTGAATATG
GACAACTTGGCACACTTCCATTTTGTAGCTGCGCCGTGCACTTCTTCTGT
TTCGAGAGGACATGAAGATGGAGTTCAAGTTTCATCATGTCTTCGAGAAG
ATCGAGCATTGCGAGAAGTGGCGGGACACTCGCCTGAGTCTGTCCAAGAG
CAAGGACGGCGTCTACAACCCCGAGGCCCCGGCTGCTGCTGCCAGCGAAG
GAAGACCTGAGCTCGGCCAGAAGAAGGCGAAGATGCTCAAGGCCGCCAGA
CCTCCCGCCGAGCGTCTCCAGGCTTCGATCGAGAAATGCCTCGCCGACAC
GAGGGCGCAGGCCGACAAGAGGGCTGAGAAGAGCGAGGAGCGCTGGAAGA
AGCTGATGGAGACACAAGGGGAAAAGGTGGCCCTCATCAAGGCCTGCCTC
GCCGACAAGAAAGCCAGCCTCGCTGAGAAGAAGGCCAACTACGCCGCCAA
GAAGCGCCACACGGACCTCAAGTTCCTCATGGGCGGCGAGGACACGTCGA
AGATGAGCTCGCCGGTCAAGGCCTGGTACTTGGCTCAACGTCAGGCCATC
CTGGAGGGCATGACCACGGCGTCCCCTTCCCCTTCCCCTGCGCCGAACGT
GCCAGTTCCGAACGCTCCCACCCCGAGCTCTGCTTCGACTTCCTCCAACC
CTGGGGCCTTCGCCGGCGAGATGGACGACAACGCCGCGTCGGCCACGCTA
CAGGAGCCCATCCCCATCGACGACTGATCGTGTTTTCCCTTATGTAATAA
AAATATGTCGCCGAACATGTAGGCGCATCTGCCGAACACCTTGTGGCCGA
GCACTCGCCGGCGGAAACTATGCAGATTCAAATATATAGCCGTTTTGTGT
CCGCCTGGGTACTCGGCCTGGGTGGCCGAGTGGGAAACTGGGCGTACCCA
GGCCAAAAACTTGCGCCATGAGGTCCGGATTACGGCCTGGGTTCGGCCAA
CAAGTGGAGATGCTCTAAGCTTGTCCATACATGCTTCGGTGCGTTTCTCT
GCTGCTCTATTTTCCATATATTTTGGTAGTCACCTCAAACTTTAGGTTTG
CTATCTTTAGTACCTTAACACTCGCCATCTGTTCAGCTTAGTCATCCTGC
TGTTATATTTCGCATACATGCTGGCCAACTGATGAGTTAGCAGTATCCCG
AGATTGTACATTGTGTCTCACCAACAATACGGGCCAGTGTGTGCCTATCG
TTGGCAGCTCCGTGCTAAAATATAAGACGTATTTTGATTTGTGAAGATAA
GGCTTTGACCAACTAGTATATAAGTCTTATGTGGTCTATGTGATTCGTAG
GAGTTTCTAATAAGAATCTAATGGCATCAATTTTCAATGACAGAAACCAC
ACATTAGATTATTTTTTGTTAAATTCGTATCTTAAAGAATCAAAGTGCAC
CTTATATTTTTGGACGGAGGAAGTATGTCTCATCAGTGACCGTGTTCAAA
TCATGCATTCGATCTTGTGCTGCACTTAAACCTTCCTAGTTGTTACTCCC
TTTGGGCAACAATGTTTCAGGTTTACTTCTGCCCCTACCCTACTCCACCT
TGCTACTTTTCACCGCCTTTTTGGGCAGAGCCCTCAACCTAGAAATTCTA
CCAGATCCGGTACTTACCGGTGCATTTTTCAATGTTGATTCATGCTATAA
GATTTGTGTCCCAGATGTCGTAGATGTTACATCTGTGGCACGAACCGATG
GTGAAAATTGTGCTGGTAAGTCACGGTTCAAGTGGAATTTTATGGGTTGC
GCTGTGACTCTGAGCCCTGGGATTTGACGCTTGACTTCAAAACCCACCTA
TTATGGCTATGATGGTGAAGTAGAAAAATGCTGCACAACACTAGGTAAAA
CTCCAGCAACTATTAACAGCTGAGCTAGTATGAAGCTTTTTAGTAGAGGA
AGTCAAGGAAAGCTAGCTGCGACTCTGAGCTTGGTTTGAATTTGGGATGC
CTGCAGATTGGAATTGTAGGTCTTCAACCGACAACACCGAAAGGAGAAGC
CATCTAGAACCAACAAACATTAGGTAGTGAGGGTATCAAAATGCTATATC
TTGCTCATGTTTGGGCCTTTCTGTTTTCAGTTTTGCAAATGCGTGTACCA
TTGTTCTTTGACCTTGCACAACAAATTATGCGTAATCTAGCTATGCCTTT
AAGGATTAAACACTTTTGTGATATGTTCCCAAAACATTTTACCTGTACGG
GAAGTAGTTTGTCTTATATTTTCATGTACTGTTTATACATTTGTAGGAGT
CAATGCCAGATGCCGACCGGAGCTTTTCTCAAGAGATAGCACCGCTTCCA
GCCTTCTCTGTTTTGAAGTTATATTTAGCAGCAAGAGAACATACTTTTGG
AGCAATGGTGCTGAGTCTTCTTAGAATTTGTTCCACTGTACAAAGGCTTG
TGATTGTCACTTCACGACTTAGAGTAATTATTATTTTTTACTTTGGCTAC
CTGGTATATACATATTGGAACATTCCTTTAGGAACATTCTTGAGATTCTA
TATAAAATTGTTGGGCTTCAACACTTTCCTCTGCTTTCAGGACGAAGAAG
GATGTCCACCGAATTGTCCTTGTGGTCAACCTCAAAACTGGAGAAGTGAA
ACCGTCCCATTGATAGCTCTTGAAGAAGTGGAAATAGAAGGTTTCGATGG
AACTGATCATGAATTTGATTTCCTGATGCTTCTGTTCAGATGCGGGACTC
TGATGAAAAGACTGTCCGTGAAACTGGGCCTTAAGGTTTCACCAAGTGAC
GATGGATGCAAGAAAATGTACAGCATTTTAAAGGCAAATCCCGATGTCAA
ATGCTCTGTTCACCAAAGATGTGGCAACCAGGTTATGTATGCATGATTGT
CCAATGTTTCTGCATGATTGTTAGTGGCTGTGAACCTGTGATGCTACATG
TATCATAGTAGTAGAGGACGTCCATTCTTGATACGAACCATCCTTTTTTT
GCTGGCATGATCCTATTTATCTGTTGCTTTTAGCTTCCTTCAGCTTTCAT
ATATTAGCGGCATGGCAACAGAAAAAGCAAAGGAAATATGCAGGGCTGAC
CCGGCGAGGAGACGCAATGTAGAACACTGTAGACATCTACCAATGCCCAT
CGCAAAACCGCTCGTTACCTCGCGGACGTGGGCAATTCCCATGCCAAGAA
TTCCTTCAGCTTTTATTCTCCGGACATGCAATAGAATGGAGTAATAAGTA
ATGCCGTTGGCAATTTTCTGTTCGTTTCAGAGCATCTCCACTCTTTGGCC
GAATTCAGGCCGAAATCCGAACCAAATTTTTGCGCAAGTTTTCGACCTGG
GTACGAGCCAGTTTCCCACTCGCGTACTCAGGTCGAGTTTCCGGGTTGCC
CGTTTCCGTTCAAATTTGGCTCAAGTTCAAATTTCGGCATAGTTCGTCAT
ACGGTGAATACAGAACACTTTAATACCAAAGTTCGGCGAAATTTTAAACA
GAGTTCGGCGTAATGTAAACATAGTTCGGTCTGCAATAAAAGTATAACAT
ATTTCGGCCAAGTTCAGCCAGTTCATGCTCAGCATCTACGTCGTGTTGCC
CCTGCGTATCCATAGGTGCTCGACAAGATCATCCTGCAGTTGTTGATGCA
TCGCCGGATCTCGGATCTCCTGACGCATTGCGGTAAATGCAACCCATGTT
GGAGGCACCTGATGATCAGGCTCGGCAAGAGGACCCTGTCTGTAGTATGG
CTCGTCCTCCTTGAGCAAACTCATTGGATCCTTCCTCTCGCCCTCAATGA
TCATGTTGTGCAAGGTCACACAACAGTTCATCACTTTCCACATCTGATCT
TTTGACCAGGTCATCGCAGGAAATCGGACAACTGCAAACCTCTGCTGGAG
TACACCAAATGCCCGCTCCACGTCCTTCCTGCAAGCTTCCTGTTCCTTGG
CAGAGTGAGAATGTTTGGGGAGCATTGGGCTTGAGATAGTCTTCACAAAT
GTTGGCCATCTTGGATAGATGTCATCTGCTAGATAGTATCCCTTATTGTA
GTGGTGTCCACAGATCTTAAATTCCACAGGGGGAGCATGACCCTCAACAA
GCTTGGAAAAGACAGTTGAGGAGTTGAGGACGTTGATGTCGTTGTTCGAT
CCTGCCATGCCAAAGAAGGAGTGCCAGATCCAAAGATCATGTGTAGCAAC
TGCCTCAAGTATCACAGTGCATCCTCCTTTGTGGCCTTTGTACATTCCTT
GCCATTCAAATGGATAGTTCTTCCTCTCCCAATGCATGCAATCTATGCTT
CCAAGCATACCATGAAATACTCTACTTTCATTGACTGCAAGGATCCGAGC
AGTGTCTTCAGCAGTGGGTGATCTCAAGTACTCTTCCCCGAACACTGCAA
TCACTGTCCTGCAGAACCTGTACAAGCAATCAAGGGAGGTGGACTCGGCG
ATGCGGAGATAGTCATCGGCAGCATCAGTCGGCGCTCTATATGCAAGCAA
CCTCATCGCCACGGTGCACTTCTGAAGCGAGGAAAACCCAACCAAGCCGG
TGCAGTCCTTCTTGCAAAGGAAATATGGGTCGAACTCCCGGATGGCATGC
ACGATCCTTGAGGAAGAGCTTCCGGCTCATCCTGAAACGGCGGCGAAACA
CTTCCTCTCCATGGAGTGGCTGGTCGGCGAAGTAGTCGGCGTACAATATG
CAATAGCCCTCTATCCTCTGTCTCGTCTTGCACTTCATGCGACCTGGCGC
CGAACCACCGCGCTTCGGCTTCGCCATCTGCATGTACAGCTGGGCGAGCG
ATGTGAGGATCTGCAAGTGCTCTTCACTTTCGGCAACCTCGGCGCTCTCC
TCCTCCAGGAGTACGGCGAGCAACTCCTCGTCGTCGGAATCGATGGTGAG
TATCTCGCCCTCGTCAGAGTCAGTGGACAGTACCTCGTCGCCATCGAAGT
CCATGGTCGAATCCGGCCAAATGTTGAACACCTGGCGGGCGTGGTGGTGG
GAGCACGGAGCGAAGCAGAGCTACGGCGAGGTTAGGTCGGCGAAAGCGGC
GGCGGAGAAGGCGTGGAGGTGGGCGGCAACAACGGTGAGCGTAGCTAGAG
GCGTGGGCATGTCTCGGTGCGGAGGAGCTCCGCCGGTGAAGTCATGGCGA
TAGAGCTCTTCGCGGCAGTCTGGGCGAGTGGAGTGGGTGGGAATGAGACT
GTCTCGCCGACAGAGCTGGCCCACGCCCTTTTTTGCGGCGTCCGGCATCC
CCAGGGCGTACCCGGGAACCTGGGTTCGGCCTGGGTAGGCCGGACCAAAA
CACGCCGAAATCCGGACGAAAACAGGTCCCTGGGTACGCGACTGGGCCGA
TTTTCGGCGTCCGGACTGAATTTCGGCGTCCGGATCGGCGTCCTGGGTAG
GCGAGTGGAGATGCTCTCAGTGTACAATATGAGTCCATACTATCTCGAAA
TCGGCTCTCGCCCCGCTTTATAAATAAAGCAACATACAGTACACAACCAG
TCATACAACAGGAACGACGCTAACTGCGTCAAGACGAAAATAAAAAGGTG
GCAATGCTGGGGCCTCAGCATAATAAAGCCCAAACAAACTGAAACAGAGA
AACGCTGACACAAACGCCACCTAGCCCCGGACGAGACGAGTGCCATCAAC
GAGCAGAAGGGGCCGCGAAGATAGCCGCCTTCCCCCGTAGCGACTGGAGA
AGGTCGTCTAGGTGCTCCCGATCCTTCCGCCTAGCAAGCGGGGACCACTG
CTGAAGAAAGCCAAGAAAATAAAAAACCGAGTTAGAAGCTCGACGCGGGA
AAATATGCTCAATCACCATCTTATTGCGAATAAGCCACAATGTCCATGAC
ATTGCTGCAAACACTAGCCAGAAGAGGCGACGCCTGCCTCCGGTCCGGTT
TGCCTCCACTTCCAAGAATTCCCCCAGGTCCTCGGCCTGCCATGATGGCC
CCAAGGCCTCCCGGGTGAAGCTCCACAGAAACTGCGCCGCCGAACAAGCG
AACATAATGTGGGTACAGGTCTCCGGAGTCCCACAAAGGGGACACATCCC
ATTGCCTGGGTCGTTCCGCTTAGCAACCTCCACCCCAGACGGGAGGCGGT
CGCGCAGGAGTTGCCAAACAAAGATCTTCTGACTAAGTGGGAAAGGCGCC
TTCCAGAGTGGGGACGTCCACTCTAGCTCTGGTCCCTGAAATAGGGACCG
ATACACCGAGCCCACGGAGAACCCTCCCTAGGGGGAGAGCTTCCAGGAAA
CTACGTCTCTAGCACTGGATAGAGACATCGGAAGGGAGTCTCTAAGGCAT
GCGAAGTCAGCAGCTTCGCCCGCACTAAAGGCTCGGCGAAACGGGATGAC
CCAAAGACCCCCCCCCCCCCCCCCGGAGCCATTTCTACTACCAAACCAAG
GGGTGAGGAGCAAATGGCAAACAGGGAGGGGAAGGCAACCGAGAGGGGAG
AATCCTCAAGCCAGGGGTCCAGCCAGAAGAGCACCTCCCTCCCATTACCA
ACGGCAAAGGAGCCCCCCCTCTGAATCCCATGCTTGATGTCCTGGATGGC
TCGCCAAAATTGGGAGCCCTCCTGGCGCTCACAAGCGAGAAGGGGGCGAC
CTCGCAGATACTTGGCTTTAATGAGTTGGAGCCACAAGCCGCCATCATCC
TTGAGGATGCGCCACACCCATTTCAACATCATGGCAATGTTGAAGCGGCG
GGAGTCAAGGATGCCTATGCCCCCAAGGTCCTTGGGGGCGCACACGTCGG
CCCATTTCACCATATAGTATTTTTGTCGGTCGTCCCTAGCTGCCCAGAAG
AACTTGGACAATTCCTTGGCAAAGTCCGCATGGGTTCCCTCCGGGAGTAG
GTACAGCCCCATCTGGTACATGGGCAGACTGGATAGACAGGAGTTGATTA
GGATCGTCTTGCTCCCCTTCATCGTGAGGCGCCCGCGCCAAGGCTCCGCC
TTATTGCGCACCCTCGTGACAAGGGGGCAAGATCCTTGATCAACACACGA
GTATCGCGCACCGGCATCCCCAAGTGAGTCATTGCACCGCAGAATGTAAA
ATAGAAAGTACCCTGAAAGAAGCATGCAGCAGCGGTTGCCATTTCTGGCT
ATCTTGTTGTTTACTAGAAACTACACTAGATGCAATGATGCAAAAACTTT
TGGTAATGCATATGCTTAATAGTTCAGCGTGTTGGTTTATCATACTACTG
CTTTTATATATTTACTTTAGTTAGTGAACTTCCGTGGAACACTGGAGGCT
GGAGCTGCCGTCGAGGAGGTGACCGAGCTGGAGCAGAGAGATAGTTTAGA
TAGTTTCACGAGGAGAAAATTGCAC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.