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GrainGenes Sequence Report: AA041693

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Sequence
AA041693
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA041693
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTGGCACTGGTTCGGAAAGCTGGATTTGAGGATTTCTGAGAAGCGAGGCT
ATTGCCGAACACACCCTACGTTTTCACCTGACCTGATACGCTCCCCCATC
TCCCCGGCCTCGCCACCCAACCCTAAACCCCCTCTCCTCCCTCTTCCCCT
CGAACCCTAGGACGGGCCAGGTCTCGCCGGCGCCGCCCGCCCGGGGGCGC
GGCGGAAGCAGAACAACGGTGGCCCTCTGCGGAGGAGAGCAGATCTAGTC
GGCCGAGCGAGCCCGCAAGGGAGGAGCCAAGATGAGGATCATGATTAAGG
GCGGCGTGTGGAAGAACACGGAGGATGAGATCCTCAAGGCGGCCGTCATG
AAGTACGGCAAGAACCAGTGGGCGCGTATCTCCTCGCTGCTCGTCCGCAA
GTCCGCCAAGCAGTGCAAGGCCCGCTGGTACGAGTGGCTCGACCCCTCCA
TCAAGAAGGTAATGCCCCCCCCCGCGCCCGGAACCCTATTTTGCTCGACG
CTCCGCGTGTTCCTTGGATTTTGCGATGTTTGTGGTGCTTTGTTAGCGTG
TGAAGTGCTATTGAATGCCGCTGTGAATTAATTAATAGAAATTAGAGGAT
CCGTAATTGTGATGTGGAGTGATTTGAAAGGATACGTAGTTGTGATGTGG
TGATGTGAAAGTCCAATTTCATATATAGCCCTGTGGAATAGCTATTCAGC
TTGAGTGTATACTGGACCTTTTCCCTGCACTAGTAAGTGTGCCCGTGCAA
CGCACGTCAACTAATACATATTCCAGTCATAAAATCTGTATACAAAATGT
TTGAAGTATAAAATTTATATTAGTCTGTAATATTGCATCCAGAGATGTGA
TCCTGCTTGAGGAAAGCATGCAACTGACATGCTGGTGAGGTTTGAATCGT
GAGCATAGCTCATGCATAATCAGAAAATGACATTGGCAAATGTATACAAT
CAGAATTCAGAATGACAAAATCATTTTTTTCTAGAAGGTACATGTGAATA
TCAGCTCACTCAACTTGACTGAAAAGTAGCATTTCGGAATCATGTCAAAC
AATATACAATACCTGTAAGAGACAATTCCTGCTAGATGATAAGGCTCGAA
AAACATAGGCTCACAAATGGCCGTGCTAATGGACTAAGAGTAGAGTGTGT
GAAAGTACATCCTTTTAGAATGTGTTGCCATGCTAAGACTTGGGCTCAAA
CAAAGTGTAGCTCCTGAGATGTATTCAATAGGATGTGAACAAGAATGGGA
TACCCAACAAAACCTGGAGAAGGGGAATGCAAAGCGTTAGAGACAATGGA
GATATTTCAGATAGTCTGACCACAACGCCACAACCATAGAGCACTACAAA
CAACTTAATGTTTTCCTCAAGTTAAACTTTTAACCAACAATTTCCATGTA
AATGGCAATATCTTGAAATATAGAATCTCACATGCTGGATCTGTTGAATA
AGCGGCTTGTACTTGGCAGAAAATTATAATAGTCAAATTATACAAAGAAT
TATTAAGTTAGTCCCTAAAAATCATAAAGTACATCATTAATGATTTGAGG
AAAGGCAAGGACTGATCAATTTGTGACCCTTGTTGAGTTGGTGCATGCCT
GGGTAAATCGACAGTGCCAACAATAGCTAACAAAATAATGACCGAAAGAA
GTATACCAAATAACCAAGGCCCCTAAAAGTGTATATTAACTCTTCTAGAG
CAGTATAGCAGTGACTCACATATGTAAGTGCATGGAATTTCTCAACACCT
CAAGTCGAACATAACTATGCTTAGAGTATTTAGAAAGTGTCATGTTATGC
CTAGAACAAGCTGAAAGTGATATTTGTTCAAGGAATCTACATTAGCACAA
AAATAAAAACACAAAGAAGAAAGGAAATCTACGTTAGCAAAAGAAAAGAA
ATAACATAGTAGCAACAGAAAAGATACCAGATATAACAGTCTAATGCCTA
GTTATAGCAAAGAAGTATATTTAAAATGACATGGTAAACTTTGGTATTTT
CAGGGACCATAAAATGTACATAATTGTATCGAGTATTTTTGCAGAATAAT
CGCACTAACATATGCTGCTGTTGTGCGGCACACAAAAGTGATTTAGAAAA
ATGTGTGGCACACAATAGTGATTTAGGAAGATACCAGGAGGGAAATATAT
GTTTATAAAATGCTATAGCTCACGTAACAATGCCGGAAACAATAGCATGT
CCTATGTTAGTGATAATCTCCTTAATCTTGGCATGGCTAGATGAGTGTGC
AAGGGTGACAAGCTCTTGCCATGCTTTACCCCTCTGTATCCCTGTATCAA
GTAGTGATCTATCATCATCTAGAATGGCTTGGCCCTCCACAAGGTCGCTC
ACCGTTGGCTTATGCTAGAGAATATTAACCAAACAAAGAGAATAATTTCC
TTCCTTATTAGGCTGCAACCACTCCATGATTATAGGACACATCCAGAGTG
GTTGGTGTAGTCAGAATGCACACAACTTCCTTGGAAAGGTGTCTCATTAG
GCAGTTCTTAGAATATGGCTCATCATTATTAGTGGAGGCCGGCACTGGAG
CACCTACAGATTATCATCCTGAAGTATCAATCAGAATATTTTGACATCTT
TACGAACATGGACATTCATAGCAGTCACAAACGTTCTTAGCGAGAAACAA
AAAATAGATCAGAAATAATTGGCAAGACAAGACAGTCGGCAACCATGAAT
TAGAGAGAGGAGCACCTCCAGGAAGCACCGGGACCGGTGTCTACCGCGAA
AACCTGAAGGGCGCGCTCCTTCTGGCCGGCGTGGGAGGCGGCGATGTCTC
CCGTGAAGACGCCATGACCGAAGTGGCCGAAGGCATCCAAGCCACGGTCG
TGCACGTCCACGAGGAGGCGGCCGCTCTCCACGGCACCGCCAGGGCACGC
GGGGCTCGACGACTTGATGTCCCCTGCTTGCCCCTCACGACGGGGTGTCG
CGGTGAAGGGAGCCGGCCGTGGGCAACGTGAATGTGATGGGGAGGCAGAG
GGGATAGGATGAATGGGGCGTGGCGAGAGGGCCTGCAGTGGCATGGGGAG
GCCGGACAGAGGCGGAGCTGGGATTCAGGTGGCGGCTTGAGGAGGGTGCG
TCGAGAGAGAAAGAGAGTAATTATCGGCTTTGACCGGGTTAGCATAACGG
TGAGGGATTTGATCCGTGAAATCAGGATGTGTGGTGGGTGGTGGACGGGG
GAGTTTGTTTTTTTTCCTCTGCGGTGGAGTAGGTTCAGTCATTCTAAATT
ACTAAGTGCACACAAGAAAACAGATTAGGCTAATTATAGCTGTTAGATTT
AATCTAGTGGGCGTAATCCTGCGGTGGCAAAGGGTCTGTGTATGTTTTAT
GGGGTGCATGTAGAGAAGATAATGTTTTCTCTTTTAATAGTAGTATAGAT
ATATATTGCTCTGTTTTTTTTTGAAATACCTCAGTAATATTACGGCCACT
TTGAAGATACAACTTATACATACACTTTGAGGTTAGGTTCTTCTCTATTA
TATGTCGCACCATGCTATTAGCCTATACACTACCTGTGAAAATCTAGCGA
TATACATATCATGAACTGTTGTGCAGTAAACTTCCACCAAAGGGAGCCAA
CTGAAATATTTGTATTGTTCTAATATTCTTGTCAAGAAGGTTAATACTAT
GGACAAAGTACATCATCTTTGGGTTGTCGTCATATACTATGGACAAAGTG
CATCATCTTTGGGTTGTTGTCATATACTCATTTTGTGGCGATGAATATTT
GTCTTTGCACGATGCTAAGCTGTTAACATGTTTTCTGTCATACTCATACC
GTATCATTGAAATATGAACGGTGAGTTGATAAAGTTATAGTATAATACAC
CCCAGTTGACAACTAATGGGACATTCAGTTCTGTATTTACATTGTCATCT
AATTCTTGAAACTTCAACATTTAGTAAAACCATGTAAAACTGAACTGAAC
TGAACTGAACTGTATTTGAGTTTCTGTGGTTTGCATACAAATTGAATTGA
ACCTTCCAAAATAGCCGCCAATCTTCACATGTGAGATGACGCTTCATGTT
TCTTGTAGTTGATTATCTGCTCTATTATGACATAGAAGATCTGCCATGTT
TTTAGTTGACTTTAGTGTAATAAGGGTTTTGCCATTTCCTTCACTTAACT
AACTCGTATCTGTTGAATCCAGACTGAGTGGACAAGGGAAGAAGATGAGA
AGCTACTCCACCTTGCTAAGCTCATGCCTACTCAATGGAGGACTATTGCA
CCTATTGTAGGTCGGACGCCATCTCAGTGCCTCGAGCGTTATGAAAAACT
GCTTGACGCCGCCTGTGCCAAGGATGAGAATTACGAGCCTAATGATGACC
CAAGAAAGTTGCGTCCTGGGGAGATCGATCCAAACCCTGAGTCAAAACCT
GCACGCCCAGATCCTGTTGACATGGACGAAGATGAAAAGGAAATGCTTTC
TGAGGCGAGGGCTCGCTTAGCTAACACCAGGGGAAAAAAGGCAAAACGAA
AGGCAAGAGAGAAACAGCTTGAAGAGGCGAGGCGGCTTGCATCACTGCAA
AAAAGGAGGGAACTGAAGGCAGCTGGTATTGACAACCGGCACAAAAAAAG
AAAGAGAAAGGGAATTGACTATAATGCTGAGATCCCTTTTGAAAAGAGAC
CTCCTCCAGGCTTCTATGATACGGTTGGTGAAGACAGGCCACTTGAGAAT
GTACAGTTTCCAACTACTATTGAGGAGCTCGAAGGGAAGAGAAGAGTGGA
TGTAGAGGCTCAATTAAGAAAGCAGGACGTTGCCAGGAACAAGATTCTGC
AGAGGCAGGATGCCCCTGCCGCAATAATGCAAGCAAATAAACTCAATGAC
CCAGAAGCAGTCACAAGAAGGTCCAAACTAATGCTTCCACCACCCCAAAT
TTCTGATCATGAATTGGAGGAGATTGCAAAGATGGGTAATGCCGGTGATC
CTGCTCTAGCTGAGGAGCTCGGTGAAGGAAGTACTGCTACTAGGACACTG
CTTGCAAATTACTCCCAGACTCCAAGGCTTGGTATGACACCATTGCGAAC
ACCACAACGAACTCCAGGTGGGAAAGGTGACGCTATTATGATGGAGGCAG
AGAATCTTGCACGTCTAAGGGAATCACAAACACCTCTTTTAGGAGGCGAT
AACCCAGAGCTTCATCCATCAGATTTCTCTGGCGTTACACCACGTAAGAG
GGAGATACAGACTCCGAATCCCATGGCAACACCTCTGGCTAGCCCTGGCC
CTGGTGTTACCCCAAGGATTGGTATGACACCCTCCAGAGATGGAAATTCC
TTTGGTTTAACTCCAAAAGGTACCCCTTTCCGGGATGAGCTCCGCATAAA
TGAAGAGGTGGAAATGCAGGACAGCGCTCAGCTCGAGCTTCGCAGGCAAG
CTGAGTTGAGAAGAGGTCTGAGATCTGGTTTTGCTTCAATTCCACAGCCT
AAGAATGAGTACCAGCTAGTTATGCCACCCATCACAGAGGAGAAAGAAGA
AGCTGAAGAGAAAATTGAAGAGGATATGTCAGACATGTTAGCACGAGAGA
GGGCTGAGGAAGAAGCAAGGCAGGAGGCATTGCTCAGGAAGAGATCAAAA
GTGTTGCAGCGGAGTTTGCCTAGGCCACCTGCTGCTTCAATGGAGATTCT
CCGGCAATCTCTGATTAAAGGTGGAGAAAGCAGAAGTACTTTTGTGCCTC
CTACATCACTTGAACAAGCTGATGAGCTAATAAATGAGGAGCTCCTTAGG
CTCCTCGAGCATGATAATGCTAAATATCCTCTTGAAGAACAAACTCATAG
AGAGAAAAAGAAAGGGAACAAGCGTCAGGTGAATGGGGCAGCTTTAATTC
CTGAAATTGAAAGTTTCGATGAGCATGAATTGAAAGAGGTACACTTCTAT
TATGCCCTCCTGTTATTGGTATTCATATTGAACTGTATATCCAATTTAGT
GATAACATTCTTCCAATTTTATATAGTACTAGTAAATTGCACGTGCTTTG
CACATAACTATATTTGTGCACGATAGTATCCTACCTTATTAAGCCACAAT
ACTCATAATCCAGAAGAATAACTCTGGTTTCGCACCACCGTAGACCTTTG
CAATTCTTTTATACAGTTCACATTTGCCCTCTAGGCAGACAATAGCATAA
CCTCTCTTGATGAGCAACGATTTGTCATTCCTTTAGACAGTAAGTATAAC
AGTGTAAGTTTCACCAAATTTTTCTCTACTTCCGAAAATTTACATTAAAC
TATCATCATTTTCCATGGTGCATGAAACAGCCTTAAAGAACTACTACAAC
CATTTCTTTTATATCCAAAAATAATTCTATCAAATGCTAATATTTAATAT
CCAATGTGTAATGTCTCATCCTATTCTGTAATGAGAACTGGCGTGCAATG
AACATGTTAGTTTAATTTGTAACTTCTGGGTTCATTTTTTTGACTTTGTA
AATGCACGAGATTCATGTTTTTTTGAAAAGAGCATATATTAATATCGCGG
AGATGCCAATTACACCTAGCCTTTTCAACAACGCACGCCATAAAAGAACA
ACGATTTTATATTGTTACAGTTTTACATATTTTTCTGAAGTAGAAAAAAG
TAGCATGTTAAAAACTACTATATATTTCCGATAAGTTGTATCTACATATA
GAGGGAGTGTATGATTAACATTCTAAGTATAATATGCAAATGTTTCTGTT
AGCTATGCCTTTTTTTCTCGGGATCGGTTCCATGTTGTATAGCCATCATA
GGCAACAGGATATACATCGGGGAGCTTTACAACGTGTAGAGAAAGAGATG
GAAACGGTCTGAGTCTGATCTTTATCAACTCGGTAACAACAACCTGAAAA
AACAACGATCTTTTATCTACTTCCAACATAATACTTCTACTGTGAAAATT
AGATATCATAGATTTGTCTAGACTTGTATTCTCTCTGTCTCAAAATAAGT
GATATGGATTTGTGTAGATTTACATGTATCTAGGCGCATTTTAGTATATA
GATACATGCGAATCTAGACAAACGCAAATCATTTATTTTGAGACGAAGAG
AGTATATATCTATACATTAAAGCTCGTCTAAATATATGTAGACAAATCTC
TGACAAAAATTCAGGACAGGAGTATATATACAATCATTTGAGAGTTTTCT
GGTTGGTGTTAGTCTCAGGAATCAGCCGGAGGAATTAAACGCTTTGAACT
ATGTAACAAGTAATTTAATGGATAGATGGTTTACTATACAGACTAACAAT
GAACCTGTTAAAACACCCACATTTAATGGTACCGCTATTTGCTTCCAAAT
CACGAAGCAAGAATGCAGATTAGATTGAAGAGTGTCCGTATTCCATGTGG
GGCCCTGACTCTTGACTGCACAAGTATAAAAGGTAGAGCAATTTTAGCTA
GAGCAGGACTCTCCAGAAGTATCCAGCGGTTTCAGGAGGACAACTGGGCA
GTCCACGAGCGCGGGAAAGTGGCATAGCGAATCCATGCATTTATGGCCGT
CAGATCTAAAGAGCTATGGTCTGATGAGTGGCACATAGCACTTCTAGCCT
GCAAATCAACGGCTTAGATTACTCTTGAAAGGTGCACCGGCGGGAAGGCT
CTAGAACTGAGGGACGAATTCAAATTCAAAAACTGCTGTATTATATAGTG
GTATAGATTAGGTACATCCATAATAACTTGAAATCATGTGGGTATGTCAT
ATATATACCTCAGTAATATCATAGCGGCAAGTCTAAACTATTCCTTTACC
AAACTGTATGATCGGTTTTCAGTGTCGGCTATAACTAATCCGTTGGCATT
GAATGCTATCCTTTAGTAAATTTCAAGGGAGGACAAATTAATTTGCATAG
TGGGAGCTGTATATAGCACATCACTAACAAGATGACTGCTTAGATTTAGG
ATTCATAGAGGAGCTATGCTAGTATTTTACTCAATTCTTACTGTGTGTGC
ACTATGGTTTTTTCCTTGGATATTTTTTGTGAACTTTTGTTGGATAGTCA
TAATAACAAAAGAACATTCCATGAAGTATCTTAATGCCTTCTTTAGACTT
AACTAAATTTGTATTTACATCAACTTAGATTTTCAAGCTATGGACTCAAC
TTAAATTAGCATTAATGCCCCTTAGTTTTTCAAATAGCCCTGCCATCATC
TGATAATGTGCAGAATTGCAGGTTCTTGTCGTAGGATGTTAGGAATCATA
GCGGTGTTGTAAAAATGTAACATTGTCTTCCACTGATCTCTGTAGAGTAT
TTTGTTGCTTGAAAATTGTGCTCTCCGCAATTAGATACACATATATATCC
AAAAGGCAATGAGGGTATACGATTGCTTGAGATATAACCTCTTCCAGGTT
GGGAACTGAAAGTTGGAACTGACTTTACAAGTCTGGTCGTCTCAAACATT
GGAATGATTAATGTGTAGATTGTACTATTTGAAATGTGTGGGTTAGAATT
GCCATTATGCACCTGGGCACATGGCCTTTGTGACAGTCCTGTTTACCGTT
TTTCAAATCTCTTCATTTCTTTGTTGACAGGCAAGTTCTATGGTTGAGGA
GGAGATTCAGTATCTTCGTGTGGCCATGGGCCATGCAAATGAATCTTTTG
AGGATTTCGTGAAGTCACATGATGCATGCCAAGAGGACCTTATGTTTTTC
CCGACGAATAACAGCTATGGTCTTGCCAGTGTTGCTGGAAATGCCGATAA
GGTTTCTGCTTTGCAACATGAGTTTGAAATTGTGAAGAAGAGAATGGATG
ATGAAGCAAAGAAAGCTTCTCGGCTTGAGCAGAAGATCAAAGTGCTGACA
CAAGGATACCAGGTTAGCGGGGGATGATGCGTGTCTTCTTTGTAGTATCT
CTATTAAAATTTGACTTCTCTTCAGGCAACAGTATGACTTCAGACAAATA
TACTATCTACTAATCTCGCATAATATAACTTATTTGTTCCGAAACATGGC
ATCGAATATGTAGCATACCAGTGATTGGTTGATGGTAACCTTGTCACTGC
TGTCTTTCTTTTTAGCTAACCCGTTATTCCTTGAACTGGAACTTCCATTA
CTAGCTTTTCCTTCTTGATTTGCAATGCTGATGGTTTGCTTTACTTGCTC
TTTGATTTGTTAGGCTCGGGCTGCGAAATTGGGGTCACAGATCCAAGACA
CCTTTAAGCAGATGAACACTGCAGCAACGGAACTTGAATGCTTCCAAGAG
TTACAGAAACAAGAACAGATGGCTGGTGCCTATCGTGTGAGAAATTTGGC
TGAAGAAGTGAATAAACAGAAAGCATTAGAGCGTACTCTCCAAAGCCGCT
ACGGTGATCTGTTGTCTGGTTACCAGATGATCCAAGAACAACTCGAAGAG
CACAAGAGGCAGCTTAAGCTACAGGAGGAGGCAATGGAGGCAGACAATCG
TGCTAAAGAGGAGGCAATGGAGGCAGAGAATCGTGCTAAAGAGGAGGCAA
TGGAGGCAGAGAATCGTGCTAAAGAGGAGGCAGAAAGATGTGCGAAAGAG
GAGGAGGCTGCAGCTCAAAATCGTGCTGCCGAGGAAGAAAATGAGCAGAA
GAGTCATAGTGTTGACGAGGAACCAGCACAGATTACTAGGGTTACTGATG
AAGAACCTGCAGGAAGGAAAGAAGACAATGGGGATCAGATGGATATGGAC
AATGCAGATGTAAATTGTGAACTCGTGGGCCCTACTCCTGCAGTACCCGA
CACTCAAGTGACTGGCGATGAGGCTTCAGTTCAACAGAGTACTTCCAATG
CTCAGAGTGGTGGTGATGTTACAACGAAGGATGGGGCTTGTGACTCATGC
CAGACTTGTGACAAGGTTGACTCGTCAAAATCAGATGGTCTTGAGAATGC
AGGTAGTAGCATGGATGTTGATACTGGTAGTCAGGATGTTCTTGCGACTG
GTGCTACTAGTACAGATGTAGGGAACACTGCCTTATCTTCAGATCGAGCT
GCCTCCAATGAAGAGAACTATGCTGTTCCTGAATAAAAATATCTTTACAT
ACCTCATCTTCGAAGGGACAATATGAAGAAGGCTACTAAGCAAAGAGAGG
ATGTCAGGTGCAAAGTGTGAAATCTGTATGTGTTGGCAACATTGTTGACG
GAAGACCAAGCTGCCAGAAGTTACCCAGTAGAAGCAAATTGAGTGTTCAA
ATTTGTAGACTAAAAACTTTTCTCTCCGTCTGAAGACTAGCTTGATGTAT
CATGTTTTTTTTTTGAAACGGGGGCAAAAGTGTTGCCTCAATCTATTAAT
TAAGAAGAGATTTGAACAGTTAATTAACGTTGGTCCATCTTCTGTTTCTG
TTAATTTTTTGGGTCCG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.