Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA040347

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Sequence	AA040347
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA040347
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	TCGGACTCCAACTCAGCAGATCCATGTCATCACCATGCCCAGTCAGCACT CTCTCCTCTCCGCTCCCCCGACCGGACCCGCTCTTCCCCGACCCCCTCGG CCTCGTGAACTAGCCAAAGCCAGTCGCCGTCGCCGACGATCCCGCCGCCG AGCGCTGCCGCCAAACCCCGCGAACCAGCGCCCCTGCTTCCGTCCGCCGG CTCCCACCTCTTCCTCCCTCTGGTGGCCTCCTTCTACGCGTGGGGCTTTC TCCCGCGGGATCCGAGGGTAGGGTTTACGGAAACCGGGGCAGCGAGGAGC AGGGATGAGCATCGTTTCCAAGGAGACGATCGAGGTGATTGCGCAGAGCG TCGGCATCGCCACCCTCTCCGCCGATGTTTCCGACGCCCTCGCCCCCGAC GCCGAGTACCGCCTCCGGGAGATCATGCAGGTCCGCATCCCTGCCCTTGC CCCTGTGATTATTCCGAACCGAATCACCTCTACGCTCCATACCTTATTTC ACCTATTACTGCCCACGGTTTTACGGAATTTTTGATTTGAATGTGATGAC GAGATCAGCTTAAAGCGTCTTAGGAGCCAGAATCTCGAGATAAAAGAATA TATTAAAACTGGTAGTCAATCAATGATGTCTGAAGGCAACCTCTGATACT ATATAATTAGCTCCTATGCATATTTTTATTTCAATGTGACATTTTTCACA TATCGACCGTCTATTAAACATCGGGCACTTCTTTCGATAGAACGGAAGGT TGCTGTGCTATGAGAAACAATAATGACAGCAAACTAAGATTCAGATTGGA TAACTAGCTCTCTCTAGAATGGTCAACATGACCATGGTCGTAATAAGCAG CTACCATGAAAAGTGCCGAGGCTTCGAAAATTCACCACAATCTGAATATT CCATCTCAATCCAGAGCTGAAACGGCGTCTTTATCCACAGCATGAAACAC ACTCAAAAGAAACAGGGTATGTATCACACCAATTATGTGAACCTTAATTT ACACACAGCTGTACATGGTTAGCTTCATGGTACCCATGTGAGATACTTTG AATTGCATCATGGTAAAACAAACTACAGATTAAATCATCTTTGCACTAAA TTCGCTACCAAAGGAAAAAAGTAGTTGGAAGAATGCAAAATGGGCTAACC TAAAGAAGAACTGCATAAGGTTTGGCTCGGGTGAAAATAGGAAAGACGAG GTTTGGAAGAGCAGTTTAGGCAGGAGGACAAGTCGGGGTTGGGTAAGTGC AGGATAGAACGGTTTTAGGTAAGCTAGCCGCACTGTGCCACCAAATCCAA TGGTCTTTAGTCAAAGCCGATAGAAAATGAACTATGAGGATATATTTGAT GGCGTGGCTGAGTGAGGATGCTGGTGAAAATTGCAGTAGGAGGGAACTAG CTGTTTAGTTATATTGGATTATATAGTTCGTCTCCTGTCCACAACAGCTA ATTTCCCCACAACAACAACAACATCAAATCCTTTCTATTGGGTTTCATGT CCATACTAAAGTGGTTTTTGCGTTGGCTCGCCCCACCTAACACAGCCCTC CTTTACCCCAGCTTGGGACTGGCTATTCCTAAAAGGCATAGGCGGAGTTA CAACAGCTAATTTTCCCACTTGAGATTTTTTTACAGAATCCTGAAAAATG ATATCCCTGTTCTATCTATAATCGTAGCTCACATGTTCAAAAGACATATC CATTGCTCCTTGGTATTATATTATGTTAATTCCACTGCGCATTGTACCAG GAGGCCATCAAGTGTATGCGGCATGCAAAGAGGACAGTTTTGACTGCCGA CGATGTTGACAGTGCTCTCAGCCTCAGGAATGTTGAGGTGCTTTCCATTC AGACAAAAAAAACTTAGGATGGAGCAAAATGCAGAGTTTTGTATTAGCAA GATATAGTATCACTTGAACATGTGACTTGGGTAGTTAAATTATCTTGGTA CATTTTCCCTTGAGTCCTTTCTGTAATTTTGTTCAATACTTTTCTAACAG TCTAGCTGATGCGAGCATGAGTATTAAGTATAGAAGTTCTCAAACAGCCT AACTGACGCCATGTGCTTTATGCTATGGATTTACACTCAGTCTGTATATG GATTTGCTTCTGGTGACCCCTTGCGGTTTAAGAGAGCTGTGGGCCATAAG GATCTCTTTTATATTGATGACAGGGAGGTAGACTTCAAAGAGGTAAGGAC ATTATTGATGAATGAATCAAATGAATTTAGACTTACTTTTTTTGATAATC AATTGGTGTTGTACTGCTGTCATGCAGATTACTGAAGCTCCTCTACCAGA AGCTCCTCTTGACACAGGAGTTGTAGCTCACTGGCTAGCTATTGAGGGTG TTCAGCCTGCAATTCCAGAGAATCCCCCTATCGATGGTTAGCTCCTATAT TATTCGTAATGTCTGGTTCTCACTTCTTAACATCTCCACAAGTTTTGTTT GTATGCTAGGGAATATATCTGTTCTTTTCAAATTTTTGGGGAGAGGATGA GTGACGTATTAGCTATATATCTGTTCTAGATTTTCTTTTTCTTTGACAAC TAGTATTTGGCCTCAGCAATTTCAGCACCAACGGAAAATAAAAGTATTGA GCATGTGAAGTATGATGGACTACCAGTTGACATCAAGCTTCCTGTTAAGC ATATATTATCTAGAGAACTCCAGGTATTGCGATTATGATATGTATATACC TATCTATTGGTTTAGATATTTACGAGAAATTTACATTCCTCTTTCCCTTT TGATTTTGCAGATGTATTTTGATAAAATAGCGGAGCTTATTATGAGTAGA TCAAACACCCCATTTTTTAGAGAAGCATTAGTGAGCTTGTCAAAAGACTC AGGCCTTCATCCGCTGGTTCCTTACTTTTCATACTTCATTGCAGATGAGG TTGTGATCTTACTTTCATAGCAGTGTTGGCTGAACTGGCATTACCTTAAA CTGCAATCTACGTAAATTTCAGGTTACCAGGAGTTTGGCGGACCTTCCTG TTCTATTTGCTCTCATGCGTGTTGTCCAAAGCCTTCTCCACAATCCACAC GTTCATATTGAACCATATGTAAGTGGTTGTCCGTCAAGTTTTGATATTAC TTTTCCCTGCCATTTGTTTTGCTAAAGCATTGCATAATTCTTTTTTTCAG CATATTACTTCTAAAAGAAATCCTTGTTTTCACTGACAGTTGCATCAGTT GATGCCATCAATGACCACTTGCATCATTGCGAAAAGGCTAGGGCGTAGGC TTTCTGACAACCATTGGGAGCTTAGGGACTTCTCTGCTAATTTGGTTGCT TCAGTATGTCGGAGGTGAGTGTATGTTGAGATTTTCAAGATTTAAGTATA GCAATATTCAACTTATATACCAGATTCAAATGTGATAATTTTAGAGTGTA TGCAACTTTTGTAAGCTCTGTAGTCACACCTAGACTATGATCTATAGGAT CACTCATACAAATTATATATAGTTCCTTCTATGAAATTGTGTACATTTTA TAAAGTATGCTTTAGTAATTTTTTTGTACCAAGTAAGGAGGAGCGCCTAC TTGGTGGTAAGTCAGTAGAAGTTTGACCCTTCATTCCCTACTATTCTTCC ATGAGATCTTCTATTTCTTGTTTGTGGGGCCATCTTAGGTTTGTGCTATC TTCAACAAGACATGACCAGTTGCTGTTTGTTAATTATTCTGCCACAGAGG ACTACGGTTGTAGTCATCGTGACCATTTACTAAATCAACTGTTATATTGT TCATATATTTCTGTAGGCTCTGTGTAGGCAAAGGTTCTACTCGCTTTAAC GTTGGTGCATTTTCTGTTCCTCTTAATTAACTCAGAACGATTTAGTGCAG ATATGGCCATGTGTATCACGATCTCCAAATGCAGTTAGGAAATATATTCG TCAATGCATTTCGTGATCCTCGTAAAGCTTTGACACAACATTATGGTGCT ATTCAAGGGATATCTGCATTGGGGCCCAGTGCGGTAGGTCCTGTTTATTA ATCTTCAGTTAGGTTAAACTTTATAGGAATACTGAAATATTCGCTGACAA TTTTTTGTCGATTACCAGATCAGGCTTCTGCTTTTGCCCAACCTGGGGAC GTACATGCAACTTTTGGATCCTGAATTGCAACTTGAGTAACAGACAAATG AAATTAAAAGAAAGGAAGCATGGCGTGTTTACGGTGCCCTGCTGGTTAGT TTCATAGTTCTGTATACATTTCAGAAACATGCTTTGCTTTAATTTTGTGC ACCGATCCACATTTACTTAGACAGAAGCGTTAACACAAGTGTCAATTGGT ATCGCTGACATCCAAATCCTCGCCACAGTTGTCCCTCTTATGCTGTGGTC ATCCTCTCCTGCACATATGGACATGCAGCCATATATGGTACTGATTACTG AATGTGGTGGGTGCTAGGCAGATGCGCAAGTTGAGAAGGCGTAGTCTCAC CAGCCAATTGACATGTGGGCCCTCTGGTCAGATCACATTAAGAGTAGTAC ATGTGGGCTAAGTTATATTTAGCATCAGTACATGTGGGCTAGTAAAGAAA ACCAGCTTTCCTTTTTTTGCCGCCTGTGCCCCAACCCTGGGTTTTTGAAT TGCTTATGACTATATACTGCCTCTTATGGTGCACCTGCCATTTTGTTGCT TACTGCTAGATCCATTCTTTCAGTGTGCTGCGGGCAAATGCTTGTATGAG CGGCTAAAGTTATCTCCTGGTTTGCTCTCTGCGTCAACTCAGGCACCTTT GAGGAGCAATAAAAGAGTTGCAACTAACAACCCGAGTAAGTGCTCATTGT ATTTACCATACGGCAATAAATCCAACAAAAGTCGTCCTCATGCGGTGTAG TCTTCAGTTCCTGCGACGCTTTTTCCCCTCGGATGCATAATACGGGAACT TAGAATAATGGCATGTTCCTGTGCGAATTTCAGATAAACGGAAGTCTACT ACAGATGTCTCCGCATCCCAGCCACCTCTGAAGAAGACCGCATCAGATGC GTCGATGAATTCCATGGGTTCAGCAGCAGGAAACATGCCAGGAAGCATGG ATGGATTCTCTGCGCAGCTACCCAACCCCAGCACGATGCAAGCATCATCC TCTGAACAAATGGCAGATGGCATAGCAGCATCAGGCACGATCCGGAGAGA CCAGGGAGGTAACCACCACGCGCGAAGAGTGCCCGCGGTGCTGAGGCAGG TCTGGAAGGAGGACCAAGACACCGGGCACCTCCTGGAGTCGCTGCACGAG GTGTTTGGTGAAGCCATCTTCTCGTTTATCCAACCGCCAGAGATGTCCTT CTTCCTGTAGAAAGGAAATGCGTACATAACCGTCCTGTAGTTAAGCTCTT AGTGTGATTTCTGGAACACTAAGTCGAAATCTCGGGATATAGAAGCGACT CATTTTCCTGTTCTTTGTAGGTGTAGTTTCTCACTTCTTAACTGCTAGTC ATTTTATAAGCACATTTAATGGACTGTGCAGTTCTTTTATCTGGCCTAGT CACACGGCGCTTTTTTTGTTTGTGTAAGGCTTGGCCCAGGCAAGAATTGC TTGCCTTTTCTATTTGGAAAAGAAAAGAGTTACTTTTCACCCTTTGGCAT GTACCAAAACATCTTATATTTTGGAACAAAGATAATACTTACGGAAAAGA AGTTACTGCTTCCTCTATCCAGAAATAACTGACTTGGTTTTGTCTATATT TGAATGTATCTATACACTAAAATGCGTCTAGATACATTTGAATCTAAACA AAACCAAATCAGTTATTTCTGGACGAAGGGAGTAGTATATATACCAACCA CGAGTAATGTTATCATCATGCTTGCTATCCTATGGATGCATTTGCATCAT AAACTGTGGCATATGATGGCAAGCCTCACCAATGTCCAGTGCCAAACGGG ATACAATAACGGCTGGTGCAACACCAAGCCAAGTTACACATCTTTTGTTT TTCCAGATCTCAGTTGCTAAAATATGTGCAACCTCATTCGCTGAACGCCG TGCACACGGACATAATAATCCTCGGAGCTCCTAAGAATGGCTTTGATTTC TTCCACAAGTTGATGGATCTAAGCTTCTGATCCTGCATCTCCGGTGCCAA GAGTCACATCACGTTGACGTGCTAGCAGCTCTGCCTCTTCAGCCATTCAG CATCGACATCATGGGGAAAAATGGAAGGCTCTACGAAACCTGTTCCATGG AGATCCTATCAGCACACTAATTAGAGTTCTTAAAATAAACCAGCTGAGCA AAGATGGTGATATCTGTTTAAAGAGCGACAGCCAACAAAACAGCAGTGTG GCCTTAGCAGATCAAGCTACCTAGTATGAGCAGACAGCCGACATGCGAGG GCTTGGAAAATTCAGACCTGGTCCTGAGAAATTTCAGAAGCACTCCAAAC CTGGCATAGGGATGCCATGATGATGTACAATGAATGGGCTCCATCCTTCA CTCTGTAACTTTGTTTAAAAGAAATTGAAATTCAGATGAATTTCGTTATA CAGTAATTATAAACCACACAATGTTATGAACAGAGAAAAATTCTGAAGGC ACGATGAAACAGAAGAATTCCTGAGACGAAATTGAGGCAAGCAAGCATTA ACACCTTATCTGACAGTCTGCCTGTGATTCCTTTTCAGTACGTAAAGTAA AATGTAGGAATGCAAAATCTAGATTGATATTTACCTAACCAATCTGCTGG CAAGCAAAGATATAAACACTCTGAATGTTGATGCACACAAAGAATCTAAC AACGTCCATTCAACACTTGCATAATTTGATGAGCTGAGCAGATTATAAAA TGGTAGGTAAGCTGAGACAATCAATAGCCCTTGTTAAACATCATGCACAA CAATAGTCACTTCAAAAACGGACTTCGCATATTTCACGAAAAGGAAACAT AACTGGGCAACAAAGTTAGCACTAAACAAGCAACATTATATTGCCAGCAA ATTTCTTAACTGTATTGCAGGGTAAGATTGTTACACAAAAAAAGATATGT ACCAGCCTACCAGGTACCAAACTAATTCCTTCTGTAGCCCCTCTCTTACA GTCAGTATATTTGCTTTACAGAAATATAGATATGGTAATGGCTTTAGTGA TGTGTGTAAGTGATGCGAAGGCATACATCAGAGAAAATCCCACACGGGTA TTGACGATTCACCCTGATCACCATTCTCATGGTCGTTTTGGGGATTCGTC CCCATAAATTGCAACACATGCATGTCACCAGGATATGCCTGCAGGAGTGT ACAATCACTTCAGTGACTATGGCATCAAGACTCCAGGACTTAAGCTATTG CTTTATTAAGTGGACAAGAAAGAAAGGTCAAGTGCCTCAAAAGGGCATCA GCATAAGCTTCTGTATACAAGGAGTGGTTACAAATAACTTACTTGAGTTA GTTGACCATTCCCGGGGAACGGCTGCTGTTGTAGGGTAGGAACTGTGGAA GACTGCATGACACAAGAACCTGAGAAACCTGATAACTAATCAACATGACC ACGAATTATTATCAAGAGATGAACACAGACCTGACCAAACTGGTTGAAAT CGTCATGAAGGTTGTGTGAGGTACTAAGACCAAAGTTGTGGCCAAGTACA CAATGTCCCTGCACAAAGAAGGGAGAAGCAAAGATAAATAGTAACTCCAC ATTCGCAAGGACCAAGGAATATACTAGCTATCATGTGGAAGAACTCACCG GCATTATTTGATCTGGGAGGAACTGATCCGTAGCAGTCCTTGGCTCTGTT TGCATACTGTCAGGTGTAATGGTCAGTACTCCATCCCTTGGTCCAGCCGC TGCTTCAGTACAATGGCCTATGTTCACAGCATGTAAAAGAAAATGTTTAA ATTTACTCTTACAAGTATATAAAAAGAGCTCACATCTACAAAGAAACTGT AAAGACACCTTTTTTTCGTTTCTGCCTTTTATTGGTCTCCAGCTGATTTC CACGACGAGCAACTTCATTCTTCTTCTTTCTGGTAGATTTCTGAGCTTCA CTGCTATTACCAAGAGGATAATCATTCTGAACCATACAAGTTAATTGATC CCTAATGGAATGGACAACAGATGACTTATCAGCCAGTCTAGATTGCAAAG CACGTTCAACTCCTTCAATAAGTTGATCCGACTGGCTTGCCACCAGTGCA AATGTGTCTACGTTTGCTGCAGCCTTAGCAGCAATCTTAGAGAACAAACG ACAAAGAGCTGCATAACGCTCTGGAACAGAAGATCCTCTATCACTTTCAA AATTAAATCCATCGATTTCATCAACAGTCCCCAACTTTGCATCTTTACTC CATCTCTTAAGAAAATACTGTGGGGGGATCTCTTTAACATTCCTCAGTTC ATATACCTTTAATATATGGCAGCATAATATTCCAGCAGTTTCAATTTTTT TACAAGTACATGCAGCTGTGCCATCTGATGAGTCGAACCGCACAAGTTGT TCTTTAGTTTTGCTTTTAACTGTAATCATATATGAGTCAAACTCGCCACA ACCATAAACCATACAGTCCATGCATTGTTCATATTCTTTCCTAAATAACT CGTAAGTTATTGGTGTATACAAATTTGCAGCCTGCCAGAGCAGTTGCAGA GGTGTTCTTGGTGCCCCTTGACTGGCTTGGTAATCAGCTTGTATCTCTTC TTGCCTCCTCTTCTCAACTGAACTTTCATAAAACTTCAAAAAAGAAGATA GCTCTTTCTCGCAACCCAAGTATTCTCTGATCCTAATGCCAAAGTTCTCT GCTCGTAGCATGCTTTCAATGTCCCCTGAGAATGTTTGTCGGCTGTATGG CAAGGCCCAATTTTCTCGATCTGCATAAAGCTCATTTAACAATTTGTTAT CCTTAAGGTTGTATTTCTCCATTATCACATTCCATGTGTCAACGAACTCT TGGGCATCGTCGACATCAAATACACAGTGGCTAAAATCATATGTGAATTC TTCTGAAATACTGAGAGCATGTGGTAAGGACTTAACTGCATTCTGGTATA TTTGCCACACACAAGAAAGGTGAACTGTACCAGGCCAAGTGAGACCTAGT GCTTCCTTCAAATCAGCAGACCGATCTGTCAAAATTGTCTTTGGCTGTTT CCCACACATGGCACTCTTAAAGGTCTCAAGAAGCCACTTGAAGGATTCAA CAGTTTCATCATACATGAAAGCAGCACCAAATATGACCATTTGCCTATGA TGGTTCATACCTAAAAACAAAGCTAGTGGCCGGCTGTAGTCATTCACTTT GTAGGTCATGTCAAAGCAGATCACATCGCTGAAATAATGATAGTCCAAGA TTGATCTTGCGTCAGCCCAGAAGACATTAGCAGCTTTGTCATTTTCATCT ACTTGGATGGCATAGTAAAAAGACGGATTATCACTCTTCATACTTCGAAA ATAATCTGTAAGAGCTCTGAAATCCCCTGAGTTCATATCTTTATTAGACT TGGTCCGAAGATAATTCTTGTACCCTGCAGGAATGTTGCTGGCATTTCCA TTTCCAGATTGAACCTTGGATAACACTCTTTGCGACTTGAGCATCCCAAT ATCAAATGGACCAGCAAGCTGGTGATTGTGATCCTGAACGAACTCAATCA CTCGGTATTTTCCACTGGATGTTAATTTGACAGATAACCGTGCAGGGCAA CCTGTCCTCGTCTCTGGGCAAGGTCTCTTGGCCTCATTCTTTGAGCGGAA ACCCTCTCTGGAACAGACATAAAACCTTGATCTGCTGCCACTTTTTGCTG TTTTATCCCACAGTCCCTTTCGGACACTAAATCCCACATCTCCTGCATAG CTAACATAATACTTATACGCTTTCTCTTCATTCTCGAAAACCATTCCAAC TATCGGTACTCCTCCCGCGTTCGCAACAACTTCTGGTGGCAATTCTGGCT CTTCTTCTGCCTTCTCTTCAGGTTTATCTGCAGTCTGGGAGAAACAGGCA CACTTATATAATCTCATCTTTGCATAATCATTGAAGTCTCCAGCCGTAGG GGTTTCCCATACGGTAGTTCAGTTAAAAAAATGACTGAAGTGTTTGTACA ATTTATAATTTAATAATACATAGTATCGTTCTGCGCTGCCATCATTTCGA CATCAACACAAGAGAACATTCTTCAATTAGCGTAGTTTGTAATCTCATCT AGTACCACAGTCATGCAACTCAAATGCTCATTAGTCATTACTCTAGAAAC TCGAACGCAGACACCCAGATTTCACATAACAAAGCTATATGTAGCCTGTA GTTTATCGGCGCTACCTACTTGTACCAACTATCAATTAACACATGCTGAA CTTGGATGATGGCAAAGCAGAGCGCGTCGATGCATTACCCTGCCTGAAAT GTGCAATCCACGGAATTACAGGCTGTACCTGCGCTTCCGCCTCCTTGCTG AGGAACTTCCCTCCGGCTCCTCGCCGGCGCCGCTCCGCCAGGGCCTGCCT CGAAGGGACCTTAGCGGCAGCGCGGTTGACGCCCTGGCGGCCGCCCCGCT TCTGCATGTAGCGGGTGATGACGTCGCGGCGCTCCTCGTGCGTGTAGCGG GAGACCCGGATGCCCAGCTCCCGGAGCAGCCGCGAAGGCTGGATCGAGGA GACCCCAGAGGGGCCGCACCCGTTGTTTTCTCCGGCGGCGGGTTTGGGCT GGCTCTTAGGGGCGGCGCCGGCGCGGCGCTTCTTGGAAGTGGAGGAGAGG TCGAGGTAGGTGCGCAGGATGTGGGAGGTGCGGAGTGTTGGCTGGTGTGG TTGGCTCGGCGCTGATGAGGACGCTGTGGGTTCGCCGGCGGCGGCCGGGA CGCCGGAGCCGGTGGCCATGGTGTGAGATCGGAAGGGTGGGGACTGGGGG ATACAGAGTTCTTTT

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