Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA030236

[Submit comment/correction]

Sequence	AA030236
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA030236
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CGCTAATCGCGTTGCTAATCCTGGCACAAGGTGGTTAAGCACCGCCCTCG ATCAACACGCGTCGCCTCCTCTCCTCTCCTCTCCTCCTCTGCACTCCCAC TCTTCCCTCCAAATTTCCGGCCTTCTCGCCTTCCTCCCCAACTGCCCCCC TTCCGTTCCGCCTCCACTTCCCTCACCTCCCCTCTGCTCGGCTTCCGATG TGCTAACCCTAAACCCCAATCACCGCGCCACTCCGCCGTCTCATGTACGA TCTCCATCGAGTTTTTGTTTTTCTTTACTTTCTTTTGCGCCCTTTCCCCT ATTGGCAATGTTGTTTTTCTTTTGATTCAGTGGGTGCGCGCGTTGTGTGT GGGGAAATTTTTCCTGCCTTTTTTGTTTCATTATGTATCATGGGCTCATG GCTCTGATCATGCAGTTGTACAATCTACACGAATTGCTGTACTCTTTATC CCTAATTTTCCTCGGTGATTTCGATAAGTTAATATCAAATTGTGCCAGAG TCTCCCCAAATTGTTGGGTTTGCTCCTTGCGCAGAAATTTCCGTGGCAAT GTGATCTGCTCGGACGAACCCTAGCTACTGATTCTGGTTGGAACTAATTG TGGTGAAAACTAACTTTCTTTTGCGGATGCAGAGACCAAATCGAAGAGGG GATATATGTACAGGAACCAGTTTCGGCCGGATCGATTCAACGAACACACC AACACCGCCCGAAGGCCCGGCCGTGGCTGCGCCAGTGGCACGCACCATTG GGTCGTCTCCGGCGGCCGCGGGAACGCGGCTCCGGGTGCACGACCGCGTT CGCCACCCAACCGGAGGTGAGGGAGTGAGGCTCGTCAACCTTGTTTAAGT TTTTTTCATGAGCGTGTTGATTAGGGTGTTTTTTTTATCATGAGTGTGCT ATAAGTAGGGTGTTGGTTTTTTATGGGTATGAAACATCTAGATTGCATTT GCAGTGTGAGGCCCGGGACAGTGCAGCAGTACCGGCCGAGGTCGCCGGCG TGTGTGGTACCCCAGGGGAATACCCCTGTTGAAAATGCTGCTGATACACG TACAGAACCAGTGAATCAAGGTGTGTGTGTGTGTGTGTGTGTTTGTGTTA AGTGCAACTTTTTGCCAATGTCTTTCCTTGTATATTTAATATGTGTGCAT GACGTGAGCAAGAGCGTGGATGGTTCAAATATCTAGTTTTTTTTTGCTGC TGAAACTATTAGTATATATTTTGTGTATGTAGCCTTTAGACCTTAACCAT GACATTTGTGCCTTAGGGTCTCTTCTAGCAAATATTGATTACAGAGTAAG TATTTAGGAACTGAGATCATGAGAACTTTTTGTTGATGTTTTTTCTTTTT GACGAAAGTAGTCAGCGATGCATTTTTTGTTGATGAAAATGATGGACCTT GATTTGGCAATGTAGCTAAAACTCGCTTTCTTGCTGGTGATTTCAATTCT AGCATCTTTAGGGTCATTGGAGAAACAGAAACCTCCCAATGTGCCTCATC AGAGTGACGTTCTGAACTTAGATTCTGCTAAAGGAGCCAGGGCAGCGGAT TCTTCGACACCAACAATACACTCAGAAGGTTCATTCTGGTCCCTTTTTGT AACAAAAAATGGCATGACATCAAGAAATCCTTCTAGACTTGTGTAACTTT ATTGCAATTTCTAATGAGGTGGCATATCTTGGTTATATTCATCACAGGGC ATCCATCCACTGCATTTACTCTTCAGTTTGGAACTTTAAGCCCAGGAGTC ATTAACACACAAGTATGACATTTCTTCGATTATTTTCATAGTTCCTATTA ATAACTTTCCAAATATCTGCAGTGGTTAACACTCCATGATGATCTTTTTA CAGTGTGATCCCTGCTCGGCCTCAGCCCCTTCAGATATAACTGAGAAGAA ACACGAAAAGGTCCTCTGATTTAATATCAGTTATCCTATCCTACTAGATG TATTTAGTTGGAATGCCTTTCTTTTATGTTATACTGTATTATCTCCGAGC TAAGTCTATCAAATCGTCACTTTCATTATTTGTATATACCCTTTTCGTAC TTTGAACAGCCGACTTTAATTAAATGAACCAGGATAAAAACTTGCCATAA TGACTGCTTGAATTGTATACTTCTTACGCACTTGTCAAACAGAGTAACTT CTTCTGCTCATATATTGTGACCATACACCTGTGCTATTGTTCTAAATAAC TATGCTTTTGCGAATCCATGCTATGGGGTGCTTTGCATCTTTCGATCATC ATTCTTCAATTTATATGTGAAGTGTTACAATATAGGATATCTTCCTTTCT ACTTACATATAGCACTGACCTATATTTGTTACAGTGTCAGGCACACCCTG CATTACTATCTGACAAGCATAATATTGTGTCTTTCCCATCTGGCCAGGAG CAGCAAAAGCAAGAAGCAACAGATAACTGTCGAACTGATTTGATCGACAA GTATGATAGTGTGCCTGCTACAGCCTCATCTAATTCCTGTAAAGTACCTG AGCCTGAATTACCTCAGACACCAGTGCTTCATTCTGCTCCTCCAGCTGAC AAAGTTAGTTCCTCTGCCAACTTGCTTTTAGTTGCTTTCACAGTTATGTT AGAACATAAATGTACCTATTGTTTCGTATTACAGGTTTGTATGGATTCAT GCAAGGTGTTTCCCAGAAATCCCTCTTCCCCAACCCATCAACAGTGGCAA AAACAAGACACAAGGAAAGATATGATCAGTGTTAGCCAGTCTGATACTGT GAACAAATATCCTGCTATGAAGCCCAGGATGAGTGTGCAGATTCCACCCC CGTATACTCCCAACGTAGCGCCACCGCCGTTCATTCTTCCAGTAAATGGA AGACCGCTGCCTGTGACATTCCAGCAGAAACAACCTCAAGTGCCTGTTGA ATTCAGGGGGCCGGGCATCCAAATGCAGCCTATTGGTTCTGTATCTGGCT CCTTGCCCATGAAAATGGCCATGCCTATGGGTAACGCGCCTCATGTACCA CCATTTTTTGTTCATGGTGCTCAGCCTGGTGCATTGCAACAGCCAGCCTT CATTCATCAAGGACAAGGCCTGGGATGCGCACCTCCAGCTTCTCCTCACC TTTCTCAACTGGGCAACATGAGGATTACACAAGAGTTACCTCAGCAGCAG CCTAGAAGTTGTGATGAGCAGAAGAGAACTGTCCGGATAACTCATCCAGA CACACATGAAGAGCTCATGCTGAATAGACGTGGCCATTCCTATATGGATG CTGCTTCTGGACAAATGCCTCTGCATAATATGAACCAGCTAGCTCAGCCT GTGCCAACATTTTCGCCCCTTCAGAAGGTGTATTACGGGCCTAACGTGTA TAATACAGGACATATCTATCTTCCAAACGCCAGCACTGTTCCTGTTTCAA ACAGGCAGATGTGCCCCAAAATGCACCCCTCAAGGCATACCTTTGATCCC ACTATTAACAACCAGGCAATTACTTCCATCAGTCCTCCTGTGCCAAACCC TTGGCTTGATGCTAGTTCCAGGCCACCAACCAATTTACGTTCTTCTTCAG AAGTCTCCAATTTCAAAGGTTTGCTGTCATCTGACCTGTCTGCTCCAAGT CAAGGTGCACTAAAGCCACCCACTTCCTCCCTTGTTGGAAAAAATGAATT CTCATCTCAGACAAGCATACCTACCTGCATGGCACAAACTCCCACGTCGT TAAAGTTTTCTGGGGAAGCAAATCTCAAACTTCCAGCTGCAAAATCTGGT GTACATTGCAGTACGAGTCCTCATTCCGTTTTAGCCCAGCAGGCACAAAG TAGTCCAGCCTTAGTAGATCATGCTACATCAGTTGCAGGTCCTCAGATTA TCAACTTAACTCAGGCATGTGTAGCACATGGTACATCGTCGGTTCAAGCA AAACCCATGGTTGTAGAAGAATCATCACCAGCACCTACAGTAACTTCATC CTGTGGTGCCAAAGGCCAGTTACATCATATTGTGCCTCTGCAGTCTGAGA CATCTTTGGATACTGAGGCTTCAGTGGGTAGTAAGAATTCCAAGTATGAA GGAAATAGCATCTTGGGGAAGCCTCCGCTGTTATATACACAGGAAGTTCT GTCACCAAAGTTTCCAACAACTAGTTTATTCACTGAAGATCTTAAGGACA AAGTTAATCCGGATCCTTTTCCAGAAGAAACTTCTGGAGCGAATTGTTCA GTTACTTCGCAAATACAGGATGTGATGAGTCAGGATCATATTGTAAATGC TGAAGTGGTATGCTCTAAGTCTAAGGCAGAAAAAGTTGATGTGACCATAC CGGGTGCTGCTTCCGGATCGGAGAATGGTACTGATGTTAGTAAATTGTTA AAGTTTCCTGCATCAGCTGAATCAAGTCTCTCAGAGAACAAGCGGAAAGA CGGTATACAATACTCGGCGAGTTTTCCCGGGATTACAGCTATTGTTTCAG ATTCAACTAGCCCTCGCCGGAAAATGGAACATGAAAATATTGATTCAGGG GTGTTTTCTGATCACTGCCCTTCTTCTGCTACCTCCATTGTGCAAACAAA AAAGTCTGTTTTGGAAGCAACCAGATCTAAAACTGCGCATGGAAGAAGAA AAAAGAGAAAGGAGATACCTAAGGCTGATGGTCAGAAGTCTTCTGGTATT TACAGTGCATCTGGTTCACTTGATGGGAATTTTGCAAGCTTTAGTGTGGA AGAGGTTGTCCGGAGTTCTTCCGCGGTTGATCTAAAGGAGATGTGTACAC TATATGCTGAAATGGGCACTCCAGCTGGTAGTAATAATGATAATCAGAAC AAAGATGACTTTTTCGATTGGGAAGGTGATGCGCAGCTCTCTAGTGAAAA GTTGAGAGTGTATAGCTGCAAGCATTCTAACAATGGAGCAGAAGTAAACA AAGATGGGTATGACCAGAAAAAATACTCTCGAGATTTCCTTTTAACATTT GCACATAGCTGCATCAATCTGCCTGAAGGTTTTAAGATTGGATCTGATAT TTATGATGCAATAATGAACGTCAATAGTGAACATAATCCAAACCGGGCAA GGATAAAAGATCGAGTATCAGATATTTCCCAAGTTAACCGACATATGCGT AGCAGCAAGCTTGAAGAGAACTACTGGAGAAAATCACACCCTTCTCCTGT TTCTGGACGTGATCCACTTCCTGACGTCGCTCATCGACATGCTATTTCTG GTTGGGATGCAGCACAGCGTGGTGGACGTGGATCCTCAAGAAGTGTCTCG CAGAACCAGTCATCTGGTCAGCATACTGGTGAGATTCTCTCCAGAGCTGT TAAAGAAGTAGCATGTCAACGCAGCATGTCACGTGGCTCTGTTGATCAGA AGTGGCAACATAGAAGTAATCAGGGTGCGCCATCTTCTCAAGTACCAATG CCACTTATGCACAAAGCTGAAAAAAAATATGAAATTGGTAAGGTGTCCGA TGAGGAAGAGGTAAAGCAGAGGCAACTTAAAGCTATTCTCAATAAGTTGA CTCCTCAAAATTTTGAAAAACTTTTCGAGCAGGTCAAAGATTTGAATATT GATAACATAGTTACACTTAATGGGGTCATTTCTCAGATATTTGACAAAGC CTTGATGGAACCCACTTTTTGTGAGATGTACGCCAGTTTTTGCTTTTCGT TGGCTGGTGAACTACCAAATTTTGTGAAGGATGATGAGAAAATCACCTTT AAGAGACTTCTTTTAAATAAATGCCAAGAAGAATTTGAAAGGGGGGAACG AGAGCAAGCTGAAGCTGACAAGGCTGAAGAAGAGGGTGGAATTAAACAAT CTAAAGGGGAGAGAGAAGAGAAACGGCTCCAAGTGCGGAGGCGCATGCTA GGAAATATTCGTTTAATTGGGGAACTGTACAAAAAGAAAATGCTGACTGA GAGAATAATGCATGAATGCATTAAAAAATTACTGGGTGAGTACCAACACC CAGATGAGGAAGATCTAGAGGCATTATGCAAATTGATGAGCACAATAGGG GAGATGATTGACCATTACAGGGCAAAAGTGCATATGGATTTTTATTTTGA CATTATACAGCAGCTGTCTGCAAATTCAAAGTTATCATCCCGTATAAGAT TTATGCTGGAAGATGTGATTGATCTTAGAAACAACAAGTGGAGGCAGAGA AGGAAAGTTGAAGGGCCAAAGAAGATTGAGGAGGTTCACAGGGATGCTGT TAAACAGAAAACAAGCCAATCAACTAGGTCAGTTTCTTCTACTAACTATA ACTCATTTGGTACCTCCATTAGTTCAGCATCAAGACAAGGGCCTCCTCTG GATTATGGTGCTCGTGGATCTTCTGCTTCTCGTGGATCCTCTCAAGTTCG TGCTTATGGATCCCAGAATGCTAATCTAGACAGACAGCAGACTCCAAACA GAGTCATGTCAGTTCCAGTCCATCAAAGGCGATCTGATAAATCCATTCGG CTTAGTCCTCAAGGGGAATTGGGAAGAGAAATGTCACTCTGTGGGAAGCC ACAAGCTTCACATGACATTTTGCCTGATTTTTCTCTAAGCAGTCATCATG GTCAAACCTTAAAAAGCCCGAGACAAAGTTCATTTACAGGAGCGACAAGT AACCAATCAAACTTCCAAGCCACTGCTGATACTCCTAAAAGTCAGTCCTG GGGAAATGCAGACCATGTGTTACCTATACTGGTGACCCCTGTCAATCCTG TTAGCCAAATACATACACCGCCCGCAGTCATTAAGGGTATTTGTTATGAA GCAAGAATATACTCGGAAGAGGTTCTTCAAGAAAAAGCTATATTAACCAT AAAAGAGTTCTACAGGTATGTATTCATTATTATTACTTTCACATCCTTAA CAAACATGCGCTTCTTTTTATATGCTTTAGAATGTATAATCATATCGCTT CTCTTTTTATTACCGAAATGGTGCTGACAGCTACCTGTCTATGTATAGAA CCCAAGGTTGACTCTTCTAAGTTTTTATTTCCCTTGTCGCTTGTCAAATT TGGTTAACTGGATATATGTTTTCAGTCCCCAGTACCACTTATAAATTTAT TACGGCATTAAAAGATGAAATGCATGTATCTGTTGACTGTTTTACATGGT GTCCAACAATGTTAAAAACATACATTTTTCATTTAGGATTGTTAACATAC TCGAAATTGTCAAGAGATTTCATCTGTGTCATTCAATTGGGTAAATATTT AATTTGCTTGGCAATTTTTTCTTTCATTGATGTTTTCCCTAGATGTAACT TTCTAAGTTCCTACAAGGTAATTGGTATGCATTATTTTCAATAGTTGCAA CAATATTCTGTAAAAAAAGCAAATAAATGAGCATTTAGGAGTGTTTTACA TCAACATCCCTGCCTCATTGAGTCAGCCTTAGTTCCTTACAATATTATGT ACTCCCTCCGTTTCAAAATATAAGATGTTTTAGCTTTGTGAAGCAAATGT ATCTACACTTGTTTTATGTCTAGATTCACTTCAAATATGGATGAACCTAC GTACTAAAACAAGTCTAGATACATTCTCTTTACAAACCTAAAACATCATA TATTTTGAACCGGAGGGAGTACTGTACATCAAAACACAGAAATTCATGTT TTCTGATGTATAATGATTTGAATGCTACGTCCTCCTAAAAATGTCCTGCC CCGCTGAGTCAGCCTCAGTTCCTTTAAACATTCTGCTAATCAAAACTTAG AAATTGGTATTTTCTGATGTCCAATGATTTGAGTTCTACTGCCTACTAAA AATGCTTACCTTGCATGGTTGTTCTATACAAAATTGTTACATGGATAACT TTGTTTTACATCCGATACTTCTAACAGAGATAATTGGTTAAGTTAGCCAA AAACCTTGTATATCTTTCTGGTTTTACATTTGCCTATTTTTCGGTGCCCC CCAGTGCTAAGGATGAGAAGGAGGTTGGTCTGTGCATGAAAGAACTGAAT GCCCCGAGCTTCTACCCTTCACTTATATCACTTTGGGTGAATGACTCATT CGAAAGGAAAGACCTGGAAAGGGAACTCCTGGCAAAACTTTTGGTGCACT TGTGCAAGTCTCAGGAGAGTTTGCTAAGCCAGGGAGTGCTACTCCAAGGG TATGATCCATTTGCTCATAACCAAACTTCTCTTGCGCCATAGCTCATGAC TCTGCATGCTAATAAGTGTGCTGCTTCTGTCAGGTTCCAACATGTTGTTT CAACCTTGGAAGATGCTGTGACCGACGCTCCAAAAGCGACCGAGTTCTTG GGGCGTTTGTTTGCCAAAATCATACTGGAGGACGTGCTCTCGCTGACAGA GATCAGAGTATTGCTGCAGGATGGCGGGGAAGAGCCAGCAGGGCCTGTGC CTGACCAGAACCTTACTTCCGAGGTCCTGGGGAGCATGATGGAGACAATA AGGGTGGAGTGGGGCGACTCTGCCGTGGACGAGATCCGCGCAAAGTCCAA CCTTCAATGGGAGAGCCTCAGGCGGCCTGGCTTGTGCGTCTGAATTGTCT CTTGACCACGAAGCAAGAAATGGGTAGATCGGTAGCGTTTTCTTTGCTAG GTTTGCTGGATCCTAACCTTAGGAAGAAAGAAGAAAGGTCACAAGAAACT TTTGTTGGTCTTTGCTAGGTTACTTAGCTGTTATCACCAAGACGCACTTT TGGTTTGGTATAATATTTTTGTTGGTCATGTGCTTGTGTTGCCTAAAAGT GCATGTTTCTATCTTGTGCTGAACTGAGGAGTGAAGACGGTACTGATGTT AAGTTTTTT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.