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GrainGenes Sequence Report: AA005111

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Sequence
AA005111
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA005111
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
AAACACGCCACTCGAAGCTGGCCTCTGGAAAGAAGTCGGCCGATTATGGT
GTGACGTCGAGTGCGGTGGCGTCACGCCGCCGTCCCTCTTTAAACGACTC
CGACGTGATGTTCTCCGTCGATCCTCCATCGCCTCGCTACACCAACCCGC
TTTTGACCCCGACTCCGCGTGTCCCGTCTCCTTCCGTGGGCGATCTGGCG
ATCCGATCTGAAAAATCATAAAAATATCTGCCAGAAACAAAACGAAATAA
AATACTCCTCTACGGAGTAGAATGAAACGCAAGCGCCTCCCTCTCGCTTT
CTCCTCTCTCTCCCTCTCTTCCAGCTCCTCCCCTCCTCCTCCTCCTCCTC
GACCTCGAGCCACCTCCGATTCGATTCGATCAATCTACACGATCTTCTCG
AATCGATCGGCCATGAGGAAGCGGGAGCGGGAGAACCCGTGCGGGATCTG
CGGCCACTACCACAAGTACGAGGAGGGGGAGCCGTGCGGGGTGTGCGGCC
ACCGCCCGCCCGTGCTGGCGGGGGCGCCCAGGCAGGACTCCGCCTTCCCC
TCCGAGGTGCTCAGGGACTTCCTCTTCCTAGGAAGCTACGACAACGCCTC
CCGCTCCGAGCTCCTCAAGACCGTCGGCATCTCACACATCCTCAACGTAC
GCACCCGCGCCCTTCGCCTTCCTTCTTATTACTGTTACAACATATAGGGT
TTGGTTTCTAGGGAGGGTCCCGTCGCGAGGAGGCTACCCTGTCTTACCCA
ATGCACTGATTTGAGCGTATTTATTTACAACTGCTTCTGCATTTAACATG
CGCTGGAAATTTTGCCGGCGAGAAGTTCAGTTTAGCACTCGAAATATGTA
TGGAGCTAATTTTAAACCAAAAAACAGCAAGGAAGAAGGTGTTTAGCTGC
AACTCGACATGCATCCCTTTTTCAAATTAAGTGAAACACAACCACTGTAT
TAATGTACAAAATCTAAATCTAAATACTACCAGTGCATTAAATTGACAAA
CGAATTCCTTCTCTTATACTTTGCCAATTGATGGATCTCACTTCTCTGGA
CTTCATTTACTGGATGTATGAGAGCACAACATCAAGTCCTGCAGGGTACT
GGCTTTTGTATTGGATTCATCCACTATATCCACCCCTCGTCTTTTGTATT
GGATTCATCCATCCACTGTATAGGGTACTGGCTCGCTGTGACATATGGGA
GAAGTGTCTGTGTGTTATGACCTACACCACTACATTATACCTAGATGGCT
TTCTTGCATACCACATTCATAGCAACTCTGGTTCACTCTACTGATCAGAC
AAGCACAGCTGAGCACTGTGCCTAGTCTACTGAAAAAAAAGTGGTGAATA
GTCATCTTTTTCTTTTATATAGATAGCTGATGCGGACTATGGTTTTCAAA
CTGGGCATGAGATGACAAACTATGAGTGTTTAGTTTTCCATGGGCACATA
CATTGGTTGTACTGGAGGGCGATTGAGCTTGGCAAGGCATGCTGTAGGCT
AAGGGGAGATTTTGTATTAAAGAAGGAGGATATTGAGGATACAAGACTGG
AGGAGACCAGAGGAAGAGATGGAGCGCCATGATTTCTTTGCTCATGTTAT
ATATATGTGATTTGCAAACATGGCAGATCAATAACCATTGAATGCTAACC
TGTCGTAACTCATAAATATTACATTTGGACTGAGTTGTTGAAGGCTTGAT
TATTTAGTTGTAGGTCCATGTCGTATACTAACATTTTTCACTAGGTCTTT
ATGGTTTACATGGTGCTGTTTCCATTGTCTTATGTCGAGTTCTTCGCACG
CCAATCTTGCTGTTCCAAGAACCAGGTGTCAATGAGTCAGTGATAACTAG
GCAAACATGGAGTCATGGACCAGCTACCTTATATCTGACCCTGGACTGGT
CTTCCACTGTTCAGATGTGCCATCTGAAACTTTGTGACTATTCTTGTTCT
CTTTGAAAGAGAAATGATATAGTACCAGCTCTTTACCTGTCCGTGACACT
GGCGGACTGCGTTTGTGCCAAAACCTTTGCTATCTGACCTTGCCTGATCC
TCTTTTGAAACATGTGTCACATGCCGCTTTGAAACTTTGCAAATATTGTT
GCTCTATTTGAACTGCAATGATATTTTACAATGCTCTTTACCGGACAGAC
TGTACCCTTCTGTCAAAACCTTTATCGGAATTCCTTCACTTATCACTGCC
TTCAAGACGACAAGGCTTTGCAGTTTGATGATGCCATCCAGTTTCTAGGT
ATGGTGCTGTTCCTCCAGTCCCCAGCCTGCAAAAGTATACATAAATTATG
TATACTATTTTCATTGTTCTATCCTGCAAGATTGACATTTTTGCCTGTGG
CAGACATTCATTTTCTTTTAGCATAAAACATTCTTCAATCTCAATCTACC
AATGTGGTTTCTGTAATTATATCATTTAAACTCATGTTCTTTAGATACTC
TTGTGATTTTCTCTCTCTTTTCTCTCCCATCCTATATCCTCTTATTTTGT
TATTTCTAACTTCAGAACAATGCGAGAGGGATAAAGCACGAGTTCTAGTC
CATTGCATGTCAGGGAAAAGTAGGTGTGTACATATAACATTAATTCTCAT
TACCAGCTGTTGTTTTTGATGTTGCTGGGGCTTCTTTGACTAATGCACCC
AACACACATTGATCAGGTCAGCTGCATTTGTGATAGCCTTCTTGATGAAG
TCCAGAGGCTGGCGACTTGCACAATGTTTTCAATGGGTGAAAGAACGGAG
ACCACAAGTGCAACTAGCTGATGGTAACTTTATACCTGCACAAACTTTTG
TTGACATTGAAGATGAATCTTCCTCAGAAACTACTCCCTCCGTTTCAAAA
TGTAAGATGTTTTAGGTTTGTGAAGAAAATGAATCTAGACTTGTTTTAGT
ATGTAGATTCACTTAAGTTTTGGATGAATCTACATACTAAAAGAAGTCTA
GATTCATCTTCTTCACAAACCTAAAACATCTTATATTTTGAAACGGAGGG
AGTAGAAGAAAACAAATATTGGGGTGTGCCTTATAGTTCTGCTCTGAGAT
CAATTTCTGTATTGAAGAACTTTTAACTATACTGATATGTACATCCTAAC
ACCGAACTTAAAATATTGCTCAGCGCTTAGCGCTTAATATAACCTTGAGA
AAAATAGGGTGAAACTTTTCATGTTTGGTGATAAGAGTGACACTGGAGTT
ATGAGGACCCAAGTTATGCATATTTAGAGGATTTGATATGGCCAAGGCAC
AGCAATACTTCCCATCAGTTTGCTAGTCTTTGAAAGCATGAAAAGGCAAC
AAATGAACAGTTGAGCTTATGTTCATAAATAACTCTGTAGTTGAGGTACT
GCAAAAGCTTGCATTTTGAAAGTAAGACCACACACATACCATGCTCTAGT
GTATTTGGATTTATTGTACTCCCTCCGATCCAAAATAAGTGTCACTGATT
TAATACAACTTTGTACTAAATCAACGGCACTCGTTATGGATCAGAGGGAG
TAGTATTAATATCGTCGTGGGTCTCTCAAAATTAAGTATCCGGGGGAGCT
AAGAATGTTTACCTTTTTTCTACAGCGGCACAGCAGCAGTTGATTGAGTA
TGAGCAGAAGCTTTTCGGTTCGAATGTTGGCATGGCAGCTCAATTTTTTA
CTCCAACAGATTCTTCTTTCCCCTCTCTTGGATTTGGTTTCCCAAAACCG
TCAGGCGACATCCAGGTTCCTACCTTTAATCAGCAGGCTCCAGCATCCAT
CTTCGAGCGGGTCAGCCCGAACAACATCCCGAGTAATTTCACATTTGGAG
CTGAAGGAATTTCCGAAGTGAAGCATCCAGATAGCGGCAACTTCGGTGTG
GCAAACTTGTCTGGGAGTGATGGCATGATGGACAGCTCCTAGGTTGCTTT
TGCAGCAATATAAATGGGCCGGCTGCACATTTAGTCTGGTTTCTCAGGAT
AGTTTAGATTTGCGAGAAGGAAAATTGAAATTTTTGTACGCTGTCTTTTA
TGCAAGTGCTTGGGGGCATTGATATATTCTGCATCTTAAGAGGCCCATAT
GTGCTTTTATTCGACGACCTTTACAATGGAAAGTTTGAGTAGAAGCTGCA
TATGCGCTGGTTATACTGTACAGATTTGTGTGTTAAGAAAGTGCAGCCCA
AAATGTATACACTGTTGTCATCTTCCAAAGTTTTTTTTCTTACCGACTGC
ATGGAGGCTGTGTACAGATACAATTGCACAGATCAACCAAGAAAATTATC
TGGCTCTTGGTGAACTTCAACAAAGATTGTGTGAAGATGCTCAAGAGTTT
CTGAATGTTCAGTCTATGTATGAGAGATTGCCATAAGTGAGTTGACTTGA
AAGAGCAAGATCCTTGAGACCTTGAGTGGACTTGAAAGGGCAAGATCCTT
GAGGCCTTGATGAAAGATCCTTGGTCAAGCTTTCTCAATGGAGACATATT
ATGTTTAAGCACATTTAACCGTTCATTTATTACATATTATAAACAACACA
ACTGTGACAATTGTCTGTAGCGGAGTCGATTACCGCCGTGTAAAAGATGT
ATAGTATAAAGCAAACTTGCCATCTATATATGTATGACACTTCTCTCGTG
CTATGAACAAATCAAATATTTGTTTGCACCAGTCTGCAACACCAAAGAAG
TTGGCGTGCCTGCCTGCCATCTTTGAAAACCGACAGAGCATCTAGCACCG
CCCTCATTGTCTGATGTACTCGATTGTGCAGTTCTCCTTGAGCCACTCGA
GCACCTTCGCAGCCTCGAGAACATCTTGAACCTGGATGGTTCAAGCCCAG
ACCAGACAGATAATTAGATTTTCCAGCTGCAGGAACAAGATTATACAAAT
AATTTCCTTGGCATAGTCTTGGTTCAGTTAATAGTAGGCACTCATGGTAG
TTTAACTATCATCTACTATTAGCTGGAGAAAGTTGTTGCAACAAGACCAA
AAGGGTGCCACCAGACCGCGGTGGAGTGAAGGAATTCAGTATCGGAAATA
TCAGCACTAAAAACAGCTAACAAACCTGCTGCTTGATGTTCCCCTCGTCG
TAGTCCTGATTGTAGCGTTTGAACTCTTCAATAGAATTCTCAACTTCCTT
GACGAGCTGGTCGGTTGAGTACTGCACGTGCACGATGATACAATATATAT
GTTTTTAATACATGGATAAAAGAAAATGTGCGAATCAGAAGTCAAAAGAA
GAGGGTTCTATCACTTGAATAACAATCAAATTTTAAGCATGTCATCACCT
GTAAGTTTTCGGCCTTGAATATTTCACCGACAGCTAGCATTTGTTTAATG
ATTCTGGTAATGTTCTCCCTCTCACTCTTTAGGTACTCCTGGACCGACCT
TTCGCTTGAAAGGGATGCTAACTGATCTTTATTTAGCTGCCTTTCTGCCT
GCGGGAATCAATAAATCCACATTGAGAAAGCAAGATATAAGAGCTACTCG
AGTGTTATGCTGCTTGTTCAGCACCTGAAGTTGCAGAAGTTTGGCTCCAT
ACAACTGCTGGCCTTGTTCTTGAAACATGGCACGCGGAACATCAACCTCA
ACCAACTAAACAAACCAATTAAAACATTAGTGCAAGCTCGTGCGATCTAC
AGGAGAATGTGAAAATGAATTTAATATAATGGGACCAAAGGTAATATATT
ATCTCCATGCAATAATACTTCAGAGTTCAAAAGCTATTTCAGAAGCAAGC
CCACGACCTTTCCCAGTTGGTCGAGGATTGCATTATCTGTCGCTTGTTCT
ATAGCTGTCTTCTCCACTTCTTTGCATCTTTCCAAAATTCGTTCTCGAAC
CTGTTTCAGTCACAAGGGACGATCACTATCAAAACAGTTTGGGAAAATCA
TTAGTCATCATATTTTATGATAATCACAGTCTAAAACAAATATTATTCAT
TAACCATCGTATTATATGATGATCACAGTCTACAACAAATATTATTCATT
AACCATCGTATTATATGATGATCACAGTCTACAACAAATATTATTCATTA
ACCATCGTATTATATGATGATCACAGTTTACAGAAAATATTTTATAAAGT
GATATGCGAATGATCAATCGGGAGAAGTTTCCAGAAAAAAACAGGTTACA
TATCCAATTATGTAGATTTCAATGGTTATTATTAACTCCTAATGAAATAA
GTACTACATCGATGGAATGGAAACCTGATCCATGGTGGTGCATCCTGGAA
GGAGCTTTGCGGCAAGCGAATCGTCCAACTCTGGCAACTCTCTGAAGAAG
AGTTCTTTACACACAACCTACACAATACCAGTGAAAATGGGAATGAAAAC
CTCCGGCACTAGCCTGGAAAAAGGAAACCTGTGTGGCTGTGGACTGCATG
CAGGTAAACTTTAAGGACTAACATATAATTATCTATATAACTTTGAGGAC
TAACATACAATCTGTGTGACTGTGTCCCACGTGAAAATCATACTAACAGA
TGTGTCGTCAAAAGTAACTCCAAAGTGTTATAACTTTGGTGTGATATAGC
ACAATATGATGTGATTACTAGTTGGTAGTAAGACTGGCGTACACAGATAC
ATACAGTTTGGTCTTTTGGAAGTGATACTCACAGTAAACTGCGCGCGGAC
ACCTTGCAGACTTTCTTGATCAAAGGACTCAGGGAACTGAATAGGAAATG
ATCTAGTCTCACCAGGACGAATCCCAATTAGCGAACCCAGAAATCCAGGA
ACAAGGTTATCATTTTCTTCAGTGTCCAACTGGAACCCTGCAAGTAGTAG
ATGTGCATGACATCGCAAGATAAAAGTACACCACTATCATTTCAAGTAAC
CAGAAATGAAAGCAATACTGTACATTCTATCTATGTTGCATATAGAAAAG
AATGCAGAGGACATGTGGATTCAAATATCCCATCGCTACATTAGTCAGTT
GCAATCAAAGTGGTGTACCAGGCCAGCAATAATTGGGAAAATTAAGTTGT
GAAAAAAAAATAGAACAAGATGTGTAAGGTAAACAAACCTGTAGCCTCAG
CTGATGGAATTTTTTCACCTTTAGAGCCATCGGTTGTGATAGTTTCAGCC
AATATATCTATTACTGTTACATCACCGACCTACACGTTCAAAAAATGGAT
GCTCTTACAATACAACAGTATTACTGATGCTTACCATAAAATAATACTAA
TCTAACATGCCGATTCAGAAGCAAGCCAAGTAGTTCCTCCATTTGTTACG
AAAATAGTAATGCCACTTGACATTGACAGGAAATTGTTAAGGCTATATAT
GTATATATTGACTTGCACATGGTCAATATTTTAGGCTTGGCCCATATCTC
TTTTGTATATAACTCTACCGGAAATAGAGTTGTACATGCACATCCTAACA
AAAAAAGATGGAGATTTGTGAATAGTTATTTCACAACACTAAAACTAATG
GGGAAAAACAATACATAGAAGTACAATAAATAGGAATAGCACAACAGTGG
AATATCAAGAAGTGCCCCAAGAGAGTTACAACCAGGACTCACTTCCCCTT
TTGAGAACTAGACATTATCACTTTTGTCTCATACTGGTCTGGAAGTACAA
TGCAGGTGCTAGAAGATATGAGGGTATTATACACAAGTTAGACTAGTGCA
CTAACATCATAAGATTTCAGAAAAATAAAATCATGAAGACACAAAATATT
TGGAATAAGATGAATAGTTTGCTACTTAGCCAGAGACTGACAGAAAATTA
GCCAATTTCTGCAAAACTGTGTCAGTTACTTCGATGCAGAAATTGAAGTC
CTAACTCTAACACACAGTAAAGTTTTCATTAGTATATTGCATACTAGAGC
AACAATAAGAACTGACCTGTAGACCTCTGTCAGATACTACTCGAAGACCC
CCTAGAGATTTACGACGACGCTTAAGCTCTAACTCAGCTGCCTTTTCAGC
ATCAACAATTTCATCTATTTCAATAACCACTTTGAGGTTCTTATATTTGT
CTTCAGATAACCATTGGAGTTCAGGAACAACATCCACTGCAACATCATAT
CTGAGAAAT

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