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GrainGenes Sequence Report: AA019788

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Sequence
AA019788
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA019788
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
TTAGGTTTTAGGTTGAGAGAGAGAGGAGAGAGTACTTGCCGTCTCAGAGG
CGAGAGGCAGAGTTGGACCAATGGGAGACGAAAGGTGGTTACAAGGAGTG
GAGCAGGAGGCAGAAACCCTGACAGCAAAGGCCTACCGCATCCACCCTCC
TCTCTCCTCTATACCCCCTCCTCCTCCTCTTGGCTAGCTAGCTAGCCTAG
CCTAGCCTGTGAAGAAGGAAGAGGGGGGAAAAGAAGAAAGACAGGGTCGT
AGGACGTGCTGAAGAGGACAAGATCTTCTTTGCAGTACAGTGGATGAAAC
TCCAAGGCGGATTCAATTTGCCAGTGTGCGCGAACCGAGAAGCACCGCGG
CAGCAGGGGAGCGCCAATCCCATCATTCATCCCCCCCTCTGCCTCCCCTC
GCATGCTTGCTCCAGGATGGTATGTACACATGTTCTCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCCTATTTCTCTCTCTGGTCCTCCCATCTCTTTTCTC
CTCCATATCTCTCTCCTGCAAAGCTTGCATGTACCACTCACTCCCCTCTG
GTCTCTCGTTGGCCGCAGCAGAGCTGGTGATCATGGTGCAAGGTGAGGAG
GAGAGCTCCTGGAGGATGATGGCCAGCGTCCATGACCACGACATGCAGCA
CCTCAACCAGGCGCCAACGCTCGCGTACCATGGAGGAGGAGGAGGACTCC
ACCAATCCCATCATCATCACGCCTCCGCTGCGCCGCCTGCCAGCTTCTTG
TACTACTACTCGCTGCTCGATCTTCTGCTAGCTAATTCATTTTCCTCGCA
AATTTTTCCTTCTCCTTTCGAGCCACCTATCGTCTCTTAGCTAGCTCAGC
TCGTCCTCATGCAACAGGAGCTAAGCTAGCAAGATCAGGCCGACTTTTTT
TTTTCCTGCAACCAGTTTTCAAATCCTCTCTCCTCCTCAGTGGGCTAGCT
ACTTGTTTAGTTTTTAACAAACTTGTGTGTGTGCCTCCTTTTATCCGTCT
TTTTAACAAACTTATTCCACGCACACACACATACCCAAATATATATGCTT
ATGCTCCTCCCATTGGATTACACCTCCCGCGCACGCACCGAATGATTTCT
TAATGCCTAAGATGAATCAATCCTACGAGGCGATTTGGGGCGCCACCATG
CTTTTCCTCATCCTTATCTGCCCAGCTCCATCCTGCTAAACCGTCCTCTA
GCTTTAGCAGCCTACGCCTTTCCATTCTCGAAAAGCTTCTTATCCTCCTG
TTGGATCGATTTGATTTCCTTCCTATAGCTACAGCATTATAAGCTAAGAA
GCACTGGTGTTGTTGGGCAGGGACTTCCAGCCCGCCGCCGCGGCCGCCGC
CTACTTCGGGGAGCTGGAGGAGGCGCTCATCAATGGCGCCAGCGCCGCCG
GCCTCGACCCCGGCGGCATGATCACGAGCGACGACGTGCAGACAAAGTGT
AAGCTTTCCTTCCTTTCTTCTTCTTCCTCAGCCATACACCGAAATGGATC
GTTTCGGAACGCATGGCGAGGGGAGGGGAGACATGCCTCGCCTTTTGCAT
TCCCACCCACACAGTGCCCACTGCCCCGCACCACATGCAGGACAGGGCAG
CTGTGCGCGGCAGCATAAATGGTGAGACAAAGACATCAAGCGTGTCGTCC
TCCTCCTCGGCTCGGTTGACCTCCTTCCCCTCCTCGCCCAACAGCAGCAG
CAACAGTGTGGCAGCAGCTTCTTCTCGAGCTTTGTCTACCATCATGTTCC
TCTACAGCGCCTTCTCGAGCTTGTTCCTCTACAGGCTACAGCTTTCTTCT
TGGAGTGGAGGGGAGGAGGAGAGAGACGATGAACAGGGACACGACGACGG
AACCTGATGATAAGGCCCAACCGCGTGTTAATTGAGTTCCCTTTGCTTTG
TATGTGTGTGCATGCAGTGGGAGCGGCAGCGGCAGGATACCTCGCGGTGG
CGGGGGCGGGGGCGGGGAGGCCCCCCACGCTGGAGATCTTCCCTTCGTGG
CCAATGCGACACCAACAGCAGCTGCACAGTGTAAGGACCCGCTTCCCATG
ATCATTCACTCCATTTACTCGTCCTCCCTGCTGCGACTCTCTGCTCGTCG
CTGAACCCGAGGAAAAAGACGCTCTTGTTCCTCCTCCTCCTCTTCTCGCT
CGCTCGCTCGCTCGCTCGCTCGGACGGCGCCGTCCGTACAGCCACGAGTA
AAGAAACCTGCTCGATCTGCAGCAGAGAGAGAGAAAGAGTGTAGTAGTAG
TAGTATAGCGTTTCAGAGTACACATTGCTTGATTGATTGATAAAGAGTTT
TTTATAAAAAAAAATCGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGT
GGCGACCACTGATCACTGTGTGCTGCGTTAATGGCTGAACAGGGGAATTC
GCAGTCAGTCGGGAGCACCACTGACTCGAGCTCAGCTCCTCGGAACACAA
TGGCGCAGATGGAGCCAGCAGCCAGCAGCGTCAGGCCCTCACCGCCCTCC
TCCTCCGAGCAGCACCAGGTCATGATGGTAACCACTGACGATTACAGCTA
CAAGCCAGGCGGCCTCGCTGCCGCCCCTCCCCCTCCTCCACCACCTGCCG
TCGCTGCCCCGCCAAGCTTTCAGCAGCCGCAGCTGCTGCAGCTGCACGGA
GGAGGAGACCATGACAAGGTACTACCCCTCCCCCTCTCTCTTGACCTTTT
CCTATCATCGCGCACGTACTGTACCCACCAGCTACCGAGCTTAGCCTTAC
CCAGCAGCTACTCGTACTACAACTAGTACCCGCCCCATCCCCAAGCCAAG
AGTCTCGCTAGCATAGCACAGGACACATCGCCTCGCCAGTCATTCACACC
CGTCCTTGTTACTCCCCAGCAGAATAATCTTGTCAAATCCACAGACAAGG
AAAAAAACTTGCCTTCCTTCTCGATTCGCGACGAACCAAACTTGCGGTGG
CAGCAGCAGCATTGCTCTGTCGTGTCGCCGTCCCCGAACCGGTCGCACGG
CCCAAGTGGCAGTACGTCTGTTTCGTGCTACTAGCCACCAACACGGGCGG
GCAAGCATGCACGAGCCTACCTAGCCATCTGCCCACATTATATACTCTAT
GTCTCTATGATATGATAGCGTCTTAAGGTACCAGCGGTACCAGTTAGTGA
ACACAAGGCATGTGCCCCTTTGCACTGAGGAGATCGATCGAAAAGGGCAT
GCCTGTTTGGGACGAAATATGTAGGCACTCGCCCCTCGCTGTCCCTCCTC
CTGGGTGACTGATTGGACTAATGACATACATGTGGTCAATGCTGTACCTG
GTTTAGAGGACACAATCAATCACACACACCATGCAAATGATGGATGGATG
GATGGATGGATGGACTGATGGAACACGGGTCACCTTAAACCGCCTTTTGT
CGCGCCCATGGTCGGCGGATAAAAGCGGGATCATACCATGATAACCCCCC
TATCCCATCTTATCTCACCTGGGCCTTTGCAAAGCGGCGGCGATGGCTAC
GGCCGGAGCTTGTGACGGCTGGCCAGGGACAGCTACGGCCAAAGAAAGTT
ATTCATGGATAGATACAGGGTGGTTTCTGTACTGGCTTGCCGGATCAAAA
CAACGGCGGGACAGGAACTTTGGCTCCGATGCACTATCGTGTTCCCTGTA
GCTCCAGCTGCCGCTGCTTTCCTTGATGTTGAGATGTGGCACTGTGCTGC
ATAGGAGAGGAAGGAACGATGCCACTATACACCACCTTGTTGCTCTAATT
CAGTGCCTTATTTTTTTTTTTTTGTACAGAGGAAACATGGATCCACAAGA
AAAGATGGCAAGTTGGTAGATTCCAAGGTGGGATGGCTACTGTTTATCCA
ACCTACTACTCGTTTGCTTGCTGCCTCCCTCATGGAACTGTATCAACCTC
ATCTTGCATGGTTAAACTAAATAAACCGCTATGATCTTCGCAGACGGAAC
GGCGATTAGCGCAGAACAGGGAGGCTGCTAAGAAGAGCAGGCTGAGGAAA
AAGGTGCCGAGAAAACTTAAACTCTGTTAATCTCCATTGGTAAGACTGGC
TTTGAGTGTCCTTTCTCTTCGCAGGCTTACGTGCAGAACCTAGAAACCAG
CAGGGTCAGGCTCCAGCAGATGGAGCAAGAGCTCCAGAGAGCACGGTCTC
AGGTTCTTGTTCCACATCCATTTCATCGTCTCCTCAGATAATAATAAATT
ATTATTTCTTCTCATTTTTCTCTCTGCGAAAATTGCTTGTTCCAGGGGAT
GTTTCTCGGGGGGTGCAGCGCAGCGGGTGACATGAGCCCTGGTAATCAGC
GCCGCCCGCACGTTTACCTTTTTTCCATCACTCTTAAGTACTACTGCAAA
GCCTGAATCATACTTCTTTTTTTACTTTTACCTTTTAACCTTAGTAGTAA
TAACTTCTTGCTCCATGCAGGGGCAGCCATGTTCGACATGGAGTACGCTC
GGTGGCTGGACGACGACAGCAAGCGGCTGACGGAGCTCCGCGGCGGGCTG
CAAGCGCACCTTCAGGACAGCAACCTGGGGCTCGTGGTGGAGGAGTGCAT
GCAGCACTACGACGAGCTGTTCCAGCTCAAGGCGGAGCTCGCGCACTCGG
ACGTCTTCCACCTCCTCACCGGCGCCTGGGCCACCCCCGCCGAGCGCTGC
TTCTTCTGGATGGGTGGCTTCCGGCCATCGGAGCTCCTCAAGGTTCGTCA
ATTATTACTGATATATCCTCCTCGGCTCCTCCCCTTCCTTCATTCTTCCC
GTGCATGCATTCAAGAATGATCCGTGCATCGCACGACGTACGTACGGCTC
TTGAGGCAGCGTCCCGTACTGAGGCTAGCAGCTGCCTTGTTATCATGGGC
AGATTCTTAGCCAGCAGCTGGATCCGCTGACGGAGCAGCAGATGGTGGGG
ATCTACAGCCTGCAGCAGTCGTCGGAGCAGGCGGAGGAGGCGCTCGGGCA
GGGGCTGCAGCAGCTGCACCAGGCGCTGGCCGACACCGTGGCCGCCGGCA
CGCTCAACGACGGGAACGCCGCCTCCCCCAACTACATGGAACTCATGGCT
ATCGCGCTGGAGAAGCTCTCAAGCCTCGAAAGCTTCTACCAGCAGGTCAG
TATCCTCTTCGACTTCTTGCACTGCATCATCAACACCAACTGCCTGAAAC
GTGCTGCTCTTAGTAGTTCATATAAAAATTACTGAATTAAAATTTAATCG
AACAATACGTGAACGAGATTACTGAATTAAAATTTGAACCAGAGTATATA
GTGCAGTGGTCCTCCTCTGTCAGAGACGCTAGCTGCTGGACCTACGGAGC
CATGACCTACTTTCTCCATGACAGGCCAACTTTCTTGTCAGAAACCAGCA
GATTAAACTTGTGGATAAGCATCATTAACACTTTTCAGCGTGCATAATCA
GCTTGTTATTATAAAAACCGGAACGAGCTAATGCTTCCGGTACAGCCACT
TATTTAGTGCTTTCTAGGGGAGCCGGTGGGGGCCAAAGGTTTTTTCCTGA
TTACACATGTGTGCGTGCACCTGCGAGCATATCTAGTACTACTACTATAT
ACATGTAGACAGACACATGTCGCTTTCTACATAAAGTCAATAGACGAATA
CATACGGTTGCTACTGTGCATAAACTATGTTCTTTGTGCCTCTACCCCCT
TTCTTGTGCCGGCCACATCTCCTCTCTTGTTTTTATTCTCTCTTCTGTTG
GCTGGTACCACAAGCCGAGGCCCCACACGCATAGCAAGAAAAATCATTTG
ATGTCTCATTTATGATGTTCCCATGCCTTGCAAAAGTTGCTAGGGTTCCA
ATCCATGAATAGTGCCCTTAGAAAAGACACCAATAGTGGTCAGGAAAAGG
ACACAGCCACCTAAACTTCAGCTCCGTGGACAGGATACCGTGTGATGTTC
CATCACGAATTGTAGAAAAAAACAATGGTCTTGACTTTTTATGGGTTATC
TTCTCTCTCGAGGGATAAAAGAAGATTGAGAGCCCCATTTTGTTTTCTCT
ACCTTTCCGAACCCTGATTCCGTTTGAGATATGCTGATTGTGGTTTGTGG
ATGTAGATATATGATGAAAGGTATACAGCTAACTAATAATTCTTGGATGA
TTGGAGCAATCATTCTGCATAAAAGGTCTCCTATGAAAAGATGGTGAATG
CAATATCGATAAATCAGACCAATAGTCACTTTTTAGTGGTACTACTGCAA
GACAGAAAAATATCTTATTTTCAAAAAGGGTGATTGCTGCTGATATTAAA
CCTAGATATTTCTATTGGTATTCATTCTCTTCAAGTGTGCAAAGGTAGAA
AAAACAAATGACAAGAATAAGACAAAGTTGGTTGATATATAGAGTCCAGA
TGTCAAAATTATTTTGCATCTGTTACACCATGAAAAGCCCTAAGCTATCG
GAAAAGAACGTCACATTAGAATAAGCCCTTGCAAGAAGCTCTGAACCAGC
ATCCAAAGTAGAATATAGCAATGAAAGCAACCTAGCATTAGAGTATGCAC
TCGCATGGTCTTAAAAATGCCCTATCACTAAGTATACATAATGTCAGCAT
TATAAGCCGTGTCAAATTCCTAGCCAAGCAAAGATACAGAACTGTATAAT
ATCACATCTCATTGTCTTGGGTGACTTACTTGCAAATGTGCAGGCTGACA
ATCTAAGGCAGCAAACGTTGCACCAGATGCGCCGGATTCTAACAACCCGG
CAGGCGGCTCGATGTTTCCTCTCCATTGGGGAGTATTACCGCCGGCTACG
AGCTCTTAGCAGTCTCTGGGCTTCCCGTCCTCGCGAGTAAGATTCTGAAT
TGCTCGGCTGCAAAAATTGTCACCATATTCTTAACTTTGTTCTAAGTTTC
AGAGCAAAAAAAAATGTTAAACCCCTCCAGTGAGTCACTTAGTAGGTTAT
TCATTAGAGGGAGTATTTGATACATGTGTCATAAAAAGGATATATTTTAT
TTAAGACATAACAGTTGTGTATCTAGAAATATGGATAAATCAAATGAACA
TGGCTGACAATGACTCGCACCTTCTATTTCCCCTGCAACAGGAACTTCAT
TGGGACCGAGAGTCTTAGCCCCACAGGAACCGAGCTGCAAGGTATGCACC
ACCAGCTGCAACAGAATCAGTTCTCAGGATTTTGAGGCATCTCCTGGAAG
GTGTAAACTTAGGCGTTGGTGATCTTAGAAAGAGAGGAGAGAAAGAGGGA
TTGTAATGTTCTATCATTGATTAAAGTATTTGAGAAAGCAGCATCACTAG
GAGGGAAAGCAGGAAATTGTTGGGGTGCAATGTTTAGTGCCTCTCACCTG
TTCCAATGGCTCTTGACCTGATTGAAGAGTTAGCACAGGAAATTTTGGCT
CAGACCACAGCAAAGCAAAAGGAGGAGATACATGGCTGCTCAAGGAACCG
AGCAGACAAATTCCACTTACAGAGACAGACAAGAAAAAAAATCTTGCTAA
ACAATCCTGTATTTTAAATACTAGGTTTTCCAATTTTATTTTGACAAAAG
GACACCTTTAGAGATAACACAACAAAACATGGCTGGAAGATGAATTTTGG
ATCCACTCAAAACATTAAAAAAAGATCACACCAGCTATTCTACAATAGTT
AAGGACTACATGAAAACATAAATATCTAAAACTGCCAATGAAATGTTTTA
TAATTTTTTAACATAAGTGCTAGGAAAGGTCGGCAGTAATGTATAAATAA
TCAGCGGATAACTGAGCAAAGGAAGACATGAAAGAACAGTAACATGAAGA
GCAGTGTTAAACCAATACATGTCAAACCACTGTAAGGACTCTTATATTAA
CCTGAACAACAAATCAAAAGAAGCAAGTTCAAAGATAATGATTGAAAAAT
AAATGAAACAAAATCAGCTCTGTTGTTGTGGATGCTCCATTGGTACCAGA
TCTCCAGGGACTAAAGAACTCAAAATCAGCTCTGTCATAGCATCTAGCAG
GAATTTGTTGTCAGGTGTGAGATTTTCCATCAGATGCAGATCATTCCAAT
CATGCAGCTCAGAATTCGATATACTCCCTCCGCCCTGAAAAGGATGTCGC
AGATTGAATGTATCTAGACACAATTTACTATATTGATTCATCCACATTTA
CACAGATTTGTGACATCCTTTTCAGGACAGAGGGAGTATTAACTATTAAC
TTGAAAGCTGCTCTTTAACAATGATAGAGAGATGGTAAAAAAGGGTGAAC
AAACAGGTGAGCATACAGAAGCATCAACATAAGTACACTTCAGGATAACC
TCAATCACCATAGGCAAGTCAGGAGACTTCAAAACAAGAAAATTTTGGAG
ATTGAATGATGTATGAACTGTATATAAGACACGCTGGTACAGCTCAAGAA
AGCTATGAATAGCTGAGCATTTACTTTTGAACCAAAAGAGGAGAACCTAG
CAGAGATATTGAATGCAAATGCAACGTACTGAAAACAAGAAGCATACTAC
ACTCCGTTATAAATGTGAATCTAGCAGGCTAGCAGAGATCCCGCAATTTT
CAGAAAGAAAATCCCCCAAAACCATTTGCCTGGCAAGCATTCAATGAAAG
GAAAGGACCAATGATCAGTACGCACAAAAGGAGCAGCATTGTAAGCCACA
GTAATAGAATATCCATGTATCCATACAACATACTTGATAACAGTAAACAT
AGACAATGAAATGCCTTCGAATTTTACTAGAACAACAGTAGATAGTACCA
AAGCATGAAGTCATCTCAATTATCACAATCACCGAACAAGTTCATTTCCT
GCGAGTTCATTGCTTTCTTCGGGTGTAATCCGAAAGAATCACAGAACTCA
CATCAGATTCGCCACTTCTTGAGGGAGAAAGCAAGTGCTTTGACCATTCC
TCTAAGCTTTTGCGATGAAGAGTGTTCATGCTAATAGAAGGTCGCTTCTC
ACGTATCATTTGTTCAGCAGCTTTCCAATCGTCAGCTAATCCCAGTGCAA
CAAGAAGTGCACACATCACGCATACGCTTCTGCCATGGCCTGTTAAAAAT
TCAGCAAACCACTTACAAGATGACCCGCCAGAGATCATTGTACCATAAAA
GGAAAACTTGCTCCATGTAATGGTTATATTGTAGAATTTAGGATACACAA
TAAAAATGTTAAGATAAAAGCTAACTTAAACTTGAATATTGCACAGCTGC
AAACAGTCTTGACTATTTGGGCTGACCTAGTCTTATTCAAATGGAATGAT
GTTAAAGCTACAAACTCAATACACACAATGTTGTACATAAGCTAGGATTA
TTCAAATGGACGTGTTGTTAAGCTATAAGCTCAGTCCAAAAAAATTCTGT
ATGCATAAGCTAATCTTACAAACCATTGTAAACTTATAACGAAGCTTAAA
CTAAATGGGCACGTAGCATCTGCTTAAGTTCAATTATCTAGTCCTAAGAC
TAAACCAGGTCAAACATGGTCTTGAGATAATGTATGACATTAGAATAACA
TTTGTAATGTCCATCATGTATGCATAAACCTTGTAGGGTATGCCATGACC
AATCCAATATGCTGAAGATTGTTATATATCACAGCATATAGAAGGCTAAA
ATACCCACAGCATAGAAACGAACATCAGCGCCACTTTCAATACAACTCAA
CAGTTTATCCACTTTAAGGCAGTAGATGTGTTTATCAACAATATATCTAA
TATAAGTAAGCTGCAGAAATGAATAAAGAAGGTTGCACACAACCACTACC
ATTTTCAAACACATGGAGAACACAACGCTATTCCTAATCTTAGAGGTAAT
AACAAAATCAAAGATAGCAAACTTACCATAAGCACAGTGAACATAGACAG
GTTTGTTCTGTGACCGCTTCCTCACGGCCCATCGCACAGCTGACTCGATC
TGTGAGGGTTGAGGCGCCCTTGTATCCCATGTAGCGACACACAGATACGA
AGTCTCAGATATAGTTGAGCTCCTCGGCAGCTCGCACGTGCAATCAATGA
CTGCAGGTTCACCAGGCGGCAGGCGTTCAACTGAAGAAGGCCATCCTCCA
ACATACACTCCATCAGCTATCTCAGTGTAGAGGGGCTCATTTTTCACAAA
TCTCCGGAACAGCACAAAGAGATGGATGAAAAGAAGAAACGGTGAGAAGA
TGATCCACGACCACAGGGGAAAGATTCCATTGGACGCCTTGCCGAGGAGC
AACGGGAGGTCGACCGATGGGTGGGAAGCAATGGAAATAAGCAGTGCAAT
CATACAGGCGTATATGAGGGGCAGAGAGAGCAGTTTCATGCCCAGTCCAT
GAACGAAATACGCCGTGGAGAGCAAGACTAGAGCCTTCAGTCCAATCAAC
CGTGATATCCCCCAACCCATCTTCGAAGGCTTTCAACCGAATCCTGGAGT
CAGGGAGGTATGAGTAAGTACAAAAAACTTGAATAGGCAGGGATCCTAGT
TGGTTCCAGTTAGTAAGAGAAAGCTACGCCTTCTACAGGAAACTTCAGGT
TGCGCTTGCTCAGCAAAATCGATGAACAAATCGTCAAACAAATAAAATTA
ACATGAAATTGCTGTGTACGAAAACGAGAATGTACTAATAGCAACTAGCA
ATTGAGACTACCTTGCATTACCACACCTACACCGGGCAGGAGCAGCGTCC
ATCTAAAACAAACGCGCTAAATGTTTTGCGCGATCTACCTGCGTAACAGT
TCGATATGCTACTGCTCCCCGGGGCTTGCGCATCGGGAAACCTCC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.