Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA025558

[Submit comment/correction]

Sequence	AA025558
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA025558
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATAAGAATGTGTTCTCTGCTTCCACTGACGCGTAGCCTCCCTCGTCTTCC TCCCCGTCTCGTCTCTACACTGAACCCACTACTAGAATAATTTTTTTTTA TCTTTTTTCCCACGCGCTACGGCCACCCGCGCGAATCTACCCGAGGTGGT CCGTCCAGTGGAGTACTAACGCGGCGGCGGCGGAGGAGGCACCGGCTCCC CCCTACACTCCAATGGTGGCGGAATCCTGAAGGCGAGGGAGCAGCGGAGG CGGCCAGGGGCGCGGATATGATACGGTACCAGGTGCGGAACGAGTACGGG CTGGCGGATCCGGACCTCTACGCGCCGGAGGAGAAGGATGACCCGGAGGC GCTGCTCGAGGGCGTCGCCATGGCGGGACTCGTCGGCGTGCTACGGCAGC TCGGGGATCTAGCTGAGTAAGTGCCGCGGGCTGCTGGCTATGCTTCTCTA TTTCGATGATGCTGGGATGGGCTTCGTGTGGCTGAGCGAGCGACCGAGCG AGTGGCTTGCTGTTTTGGAAAATTTTGGGCGTGCTCTGTCGCGGCCCGAC TGCGGACGCCATGGGATTATGATGCCGAACGCCTTGTGTTTTTTGCTGTT TTGGGAGCGCCTATGTGTGCATACGTTTATGGTTTTGGTGCCTTTTAGTT TGAGGTTTCCACGTGTCCTGGGCGTCGCTCGTCTCGTGTGCAGTTTTAAG GTATAAATTGAGTGGGGAATTTGCTTCACGGGTAGCATTTTTGCGCCTAA TTCTGGGGTGGTGGAGTGAGAGACACACTTTGGAATTTCCAGTCCGAATT GGGCGCATGACGATTTGAAGGGAATAGGCATGGGATTTCTTTTTAGAAAA ACAGGATAGAAAAATTCCCCCCCTAAACTCAGCTGATAGGAGGATGCGGT TCCAGTTTGCATTGTTTTCCCTGTCACGGTTGCGAGATGGGGAAATTAAG CCGTGCTCTGGTCCTTTGTTGCACTCTATGCAGCTTCCAGGAGAATCCAT GTTCTGCATACTTGCAGTTGGTAGTTGTTTTTAACAAGGACTCTAGCCAC GAGAGGCAGCATTGAGTTTGCATTTTATTTATCCTAAAAGGAAGAATGTG CATTACATTGCCTTATGTGAATTCTCATGTGAACACTTTTGATGGCTTAT GGCAGGGTCTCGTTGTTAGTTGTCATTTCCTCTTCTAAGATTCGTTCGAA TTGTTTGCAGTGTTGATTATCAATGCTTCTATCCAAGTCATGATATTTTG TATTAAAATTGTGTTCTAGATGTGAATATGTCACTGTTTCCATTTGTGCT GAACAACTTTTTTGTGTTCTCCTTGTGAAAGGTTTGCGGCGGAAATTTTC CATGACCTGCATGAAGATGTGATGGCCACTGCTTCTCGAGGCCACGGTTT AATGCTTAGGTTGCAGCAGCTAGAGGCAGAATTTCCTGCAGTTGAGAAGG CAATCATAGCCCAGACTGACCATTCAAATTACCTACATGATGACGGTTAG TTGAAACCTGGAAAAAGACCGCAGATGATCTGATTATTGTTCTGCATTGT TGTGGTTCTTACTTCAGATGTTCTTGTTGCATTCTCATGTAGGTATTGAG TGGCATGCAAATCTTCAGCTTAATCAGAATTTGATCACGATAGGAGATAT GCCTCGTTTCATTTTGGACTCATATGAAGAATGTCGTGGCCCGCCACATC TATTCACGTTGGATAAGTATGCGTATATGCTTTGCATTTTTGGTGTGTAG ATTTACTATGGATGTGTTATCAACAATTACACACAAGGATTGTTCTTCAG GTTCGATGTTGCTGGTGCTGGGGCCTCCTTGAAACGATATTCAGACCCCT CTTTCTTTAAGATGGAACAGACCTCCAACATGATTGAAACTGATTACTTA AGAGAAAAGAATCCCCGTAAAGTAAAGGCAAGTAAAACATTCTCAATTCT TCCCAACATTTCTCCTTTTCTTGCAAAAAATTTCTTCACTTTGTGCTATA GCTACTTTACCAAGTGCCTCCAAGCAAAATGCGACAGTAGCTTCTGTTTC CTTTATGAACTTGAACAACTTTGTATTTGGGAAATGCTGGTCTAAAGGTA TGGCGTTCACCAAAATACTAATATACACATCACCTTTAGAATCGTTTTAG AACACATAACCTTAGCTTCAGCTTGAGGTTCGGGTCACCCAAATTGCGTG AACAAAAAAGTTTGATGCAAGAAAAAGATGCTGCACAGTAGTGTTTATAT TTGGAAGGACTGTCAAGCTGAATTACATTGTTTATCTGCCAATAGCTCAT AATAAGTTATCATCTCAACTTGCCATGGACTTGAGAGTAGAACCCGTTCT TCATATTATTTATGCTGCTAAAATTTATGTAGATCTTCGTGGTCCCCTAA TAATTTTCAATTTCTCAACCAGAACAATTTCCTTGAAGTCAAAAACTTAT GAAGACCTTTTCTTGCAGAAAAAAGCTATGCGCAGGAAAGGGGAAACACT CGAATCATTGCTTGTTGCGAACTCTGAGTAAGTTCAGGGCCACAGGATTT CATGTGCATAAGATACACATAACACAGGCTTGGTGGAATCTTAGTTAGAA ACAATTTTAGACTAGATTTACCATGATAGTACAATATAATTATGTTTTGT GCAAAACCTGCAGGTCTCAAATAGCTTCCTCAAAAGATAGATCTTCTAGA AAAGTTCCACCAAGGACAACAAAGCTGAAATCCAGGCATCTGCGGGATAC TTATAATAGAACTATAAGCAGAATCTGCAAGGAACAATTGCAAGAAGTAA TTTCATCACAACAAAAAATCCTGTCAAACTATTCTGCAAGGTACTACCAT TCAAAATTTACTTCAACTGACTCAAGTGAAATAATATCTTCATTTGGAGA ATTGGACAACTTCAGTGCTCCTGCTCAGTCTTCTGCTAAACATGAACTGA CTAAGGTTGTCCCAGTAGACGAATCTGACACCTTGGTGACTGCATCTGTA CCCACTAATGGAACGGTTTTCCTTGAGGTAGATGATGGTCAATTTATGGC AACACAACATGAACACACTAAAATGGAACAGATCTCTAAGGGATATCTTG TGGAGCAAAATGACATTTTCTCAACCTCAGAAAGGTCGCAAGGAGGTAGA GATTTTAAGGATGAGGAAAGCAATTGTCCATTGCAGTCAGTGCGGGAAGA GAAATGTCAATCAGCGGTTGTTCCTGTTAACCATGACGATGGCCACTGCA CGCCTGATGAAGTTGGTAATGATCAAGACAACTTTATTGATGCCCTTAAT ACAGATTCAGAAGGTGAAGTCAGTCGTGACATGCAAAGTGAAAGGGGTCT CAGTTCCAAAATTGAAGCGAATAAGTTGAGCTATCACGAGGAAGTTGAAA GTGCATTGCATGAACAGTTTTCAGAACTAGGTCCTTTCACAGAACCAACC CGTGCAGAGTCATTTTTGCTAAGTGATTCTTCTCCTTCTGCAGTGTCAGA CGCAAAAGATACAGACTCTGGTTCAGATTCTTGCAGACAACCGAGTGGTG GTAGCTGGATCAACAGAGAACCCTTTAATGATGTTGATCTAATGGATGTC AGCTCATCATCCAGTGTAACCTCCGATGATAATGGAAATTTTGAAAGCAA CAATAATATCAATGATCATGAACAAAACCAGGAGGTTTCTTTTCTCCCTT CCAATGATTATCATGCTGCTGTCCCTAGCTCTGATAAACAGTTATCCCAG AGATCTAGTGGCTCGGATGGTAAATTTTTACCTCTGAAGTATAAATTCTT TCAATAAATTCCTTTTCATTTATGTTTGGATGAGCCCAAATTTGCTCCGA TGGAGTTTCCTCTTTCTTTTTCTTTGACCTGTATTTACTGTCTGACATGC CAGGTTTAGCTACCAGCAGCAGTGATTACCAGGAAAAAGCATATTGCTCA GCCGAGCATTGTGAAAACAATGTGCTAGATGGTACTTCTACGATATTTGG ACAACCTAATGATGTTTCACATGGTGGAGAAATCAGAGTTCCAGATGCTG ACGATTTGTTACTCCCGGGTTGCACACCTAATCATGAACAAATACAATTG TCCAAGAACCAGTTTGAAGAATTTACATCTCTAGATACAGTTGTCCAAGG AACAGCTAGCAAATTTGTCACACTGCCAGACATGGATCCTATTGTGCAAA TGAATGACTTGGAGTTGGACAATATTGAATTTCCTGAAAAAATTAATGCG AGTACAACACCAACTACTTTGGATCCTGATTGTATCCACAAGCATCTTGA TGGTAAGTAATTGTTCATTTTTTCTTTCATCACCACCTCATTCGACCTAA ATGATTGGTTATGTTGGGTGGTTTACCGTGTTGCATTTTTTTTAATTCAG TACATTCAAGCATGACGAATAATCCATTGTATGAATCAGATGATGATGAA ATAGTTGAAGAATTGCACAGTTTACCAGCTGAAGATCTATATAAGCATGC TGCAGCGGATCAAGAAATATTTAAGCTGGAAAAGGGGCCTTGTCCAATTA GGCTTGACACACACAAAGAAGATCCTATTCAGGAATCTGTTGTGCCCATG CACTTATCTAATGTTCAAGCGATTCCAGCACTTTCTGAATCTGCATCAAC TTTCCAAGATGACACAGAAGCTCATGTAAATGAGACGCTGGAACCCTCGC CACGTATGTTGAATGTTTTTACAAAAGCATCATTTATTGATGCCGCACCA GCTTCTTGTACTGCCCCCCTACTCGGTACCAGCAATTCCTGCATGGAATA CTGTGAATCAATTGAAAATGGAAAAGGTGTGGAGCTCAGTGAAGTTCTGG TTAATGCTGAGCTTGCAGAAGAATCAGTTACCAGCATGTTTGAAGATGGC ATGATACCTTTGGAAGAGGAGCGTACTGATTTTGCCAACTATACTGAGAA AGCAGTGATTCTGGCTACAGATTCCAGCGAGGAAAATTCAATGCATGTAC TGTTGCAATCCAGTTCTCCATTCAGGAAAGACATGGAAACAGTTGAAGCT ACATCTGAGACTCTTGGATCACTAGAAAAGTCAAGAGGACATAGCTTTAA AGAAAGTATGTCACAGCCAGACATTCTTCCAGAGCCTATTGAAATAGAAA CTTCAGGTGAAACATTCAGTGAAGGTCATGATATTCGATATGTTCCATCA TTGCATCATTCAGAAGAATCTTCTTGTCTAGAGGAATTACCAGAAGAGAC CACTCTTGGCGCTGAAGTCCCATGTCAGTCTGATTTGAACAAGGATGTCG CAGTAATCATGAACAGTAACATGGTGGAGGAACAACCTCCACATGTTGAT CAAGATGTGCTAAGTGAGCTGTCTTCTCAAGATCCGTTTGGTACAAACCC ATTCGTGGATCCTGGGTGCAGAGTGAGCTCTATTGATCCTTCACCCGGTA TGAGCTATCAACCATATTGTTCTGACGAAGAACAGGATTTTCTTTCAGAA CTTCTAACCCAACATGGTCACACGAAAGCAAAAGAGAACCAGTGCCCACT TACTGACGATTCCCTTTGGGAATCTGCAACTCCACCTGATGAAGCACCAT TGCCTTCAGAAGTTATGACTGAACAGGACTTCGGATCCTTCTGCCATGAG TACCATGAGATGGATTTTGCTGCTGTCACAGAAGGTTTTGATGATGAACC ATCCTCAGACTCTAACAATATTAGAAATGGTTGTGTGGTCAGTGTACTGG ACTTCCCTTGTTCTGTCTCTACGCTGCCAATGGAATTAGATCATAAAGCG GATTGTTCTAAGCCTGTTTCTCAGCATCCTGAATGTTCATCTGCCGATGG GGTACCGGGTGAGACAACCATGCCCTTTTCTGCGAGGGAGGCTTCTGATG ACAAGACACCTGGAGCGGATTCTGGCTCGAGTTATCATGAGTCTCTCCAT GATGAGAAAAGTCCTATACTTATTACCCCTTCTGTTCCAGTGAAATTAGA GCAGGAACAACATGCCTTGCATGGTGTTGATTCTGATAGTGGTACTGGTA CTTGTTTGTTGGATAATGAAAAGATTGGTGAAATATATGGCTCTCCTTCA GGGAGCGTTGCTCCAGTGAGAGAAGAGCAGGAAACATGTGCTAATCTTGT TCCACATGTTCTTATCAATAAAAAGTTAAATAAACTGGATGTTCATTTTA TCAACTCTCTACCACTGGAACCAGCAGTAGAGGCCTGGGGCTTGGATGAA CTGGATGTCCTTCCTTTGAGCAAACCTGTTCTAACACAGGAATCAGACGT TCATGTCTTAGATGAGCTTAATTCTCAAACTGTTCCATCTTCCTCGATCA ATCCAGATGCCCCTCATCTGAAGAGTGCTCCATGGCCCTTAAGTAATTAC GAGGTTGGTGAGCTAGATGAGACTCCATCATCCAATGTCCAAGTGGAAGC AGAGAAAGGATCCTATTACTCCTCTGAATTTGATTCCCGAACTGCTCCAT GTTATTCAGTAAATGATAAGATTGATGGACAAGCCGCTGCTTCATCAGTA GATGGTATTGAGGTAGAACAAGGGTGGGAAGCTTGTGCATCCCCTGAATT GGATACCCCTCCTTTGAGCAATGATCTTCTAGTGGAAAAGGAGGAAGAAG TTTGTGTTCCAGATGAACTTGATTCTAAAATTGCTTCATATTCTTTGCGT GACAAGAAAATATATGAACTAAGTTGTCCTCCTTTGAGTGGTTCTTCACT AGTAGAAAATGAGTCAGAAGATCATGTCTCAGGTGATCCTGATTCCCAAA TCGCTCCATATTCCTCAGTAAATGATAAGATTGTTGGATCAGGTGCTGCT ACATCAGTAAGTGATACCGATGTAGAGCTAGGGTGGGAAGCTTGTTCCTC TCCTGAATTAGATTCTCAAATTGCTCCATGTCCCTTAAGTGATTACAAGG TTGGTGAACTAGATGGGAGCCCATCCAATGCCCAAGTGGAAGCAGAGAAC GGATCCTATTACTCACCTGAATTTGATTCCCGAATTGCTCCATATTCTTC AGTAAATGATACTGAGGTAGGACAAGAGTGGGAACCTTGTGTGTCCCCTG AATTGGATTTTCAAATTCCTCCATGTCCCTTAAGCGAGGACAAGGTTGAT GAACTAGATGGATCTTCATCATCCATTGTCCAAATGAAAGCAGAGAATGG GTCTTATTACTCCCCTGAAATTGAAATTGAAATTGATTCCCAAATCATTC CATATTCTTTAGTAAATGATAGGGTTGATGGACATGGTGCTGCTACATCA AGAATTGGTATTGAGGTAGAAGAAGGGTGGGAAGCTTGTGCATCCCCTGA ATTTGATTCTCAAGTTGCACTAGGTTCTTCAAATTCTGGTGCACTAGCTG AAAGATCAACAATGACTTCTACTTCTGTGGAAAACTGTTGGCATTCTCCT GTTACACCACAGACTAAACCATTTCAAAATGTGTCCAGTGAAGATCCTGC AATGCCACCCCCTCTTCCTCCTCTCCAGTGGAGGCTTGGAAGGCCTCGCT TAGGCCTTCTGAGTACAAAAGAACGTATGCCCGACCCTGTAATGAGAACA ACTTCTTTGCCTGCATTCAGCCAATATATTGGTAACAGCCTTGGATCACT TGACAGAATGGCAGAACCAGTAGTATCAGTTTCCTCCCAGGATATCAAAG AGAAGTATCAGAGTTCTATGGTAGACGATAATGATAAAAGGGCAGAATCT GGAAAATCTTCTACGCTTCCAACAATAGATGATGTTGCAAGGGAAGATGA CAGACCATTTTCAGAGGCTTGTGGGAACATCAAGCATGAGGGGCATATCA CTTCATCACCAATGGAGGCTGAAGAACATCCGAATGACAGTGGGGTCACT GAACAAGTATCTAACCAGCAGGACCCTCAACAGCACCTTTTATGTTCAGA TATTTCAGACATCACTGAGCATCTCAGTCATACAGATCGAGCTACGTCCG AGGATGACAAAACGGTAGATGATCACAATGCCGCAGGTAGTGTGCATTTA CACACAGTTAGCTCTTCAACACCAGGGCATATTTCTGAAATTGGAAGGTA CCAGGAACCTCAGCATGGTGAATCGTTCTCAGGGACTTCAGACAATGAGT ATAGTTCAAATGCATCATATGAGCAGAACAATCTGAAAGATCAGTTTATC ACAAGTGCAGTACCTTCAGACACAACAAAACACACTGGATCAAGCTCAGC GTTAGAACAAGGAAATAGCCAGGAGAGTCAGTTACAGGAACGGGATGCAG AGAACAGCAAGGGCAGTTTGTCCGAAGGCCCCTCACAACCTAGTGAAGAA CGAATAGTATCTGAAGATTATCCCCATGATGATCATAATTTGGGGAGGGA GATTATACATCAACCAAACCTGTTGTTGCCTAGCAATAAAAATAAATATC TGGGTGGCCTTGGTGAAGGTAGCTATATGCAAGGTGAGCAGCCACCAGTA ATGGGATGGACTGTTGGACCCCAGATGCTTCATCCTAATTATGGAATATC AATGGAAGGGATCCAATTTGAACCAGAGGTCACAGAGCATCGCTTAATCA GGAAGCCAATTTCAATGAGAAACATCCCAAGAAATCCATTGGTTGATGCT GTTGCTGCTCATGACAGAAGCACGGTAATCTTCCACTGTCCTCGTGAACA TCCTCCTCATGTACCGCGCTTATGTTTCTTGTGTTTAACACCTAACCACA TTTATATCACCGCAGATGCGTAAGGTTTCAGAACTTGCTCCCACAACTGA TAAGCCGAACCCCGATGAGAGAAACTTATGGCTAGAGCAGATAAAGAACA AGGTTGGTACATAGAAATCTCTTCTTTCTCCATGGAGTTCTCGCACCATC CCCCTGACATGTATGTTGTTTGTTCTCAACCAGACCTTTGACCTGAAACC AGTGGGTTCTGCTAAACCGACATCCATGAGAACACCTGCTAGAGCCCCTA CTGGAAACTTGAGAGTCGCTGCAATAATAGAGAAAGCAAACGCCATACGC CAGGTTTGCCTCCTCTGCAGTTAGCTTCCATGTTGATGTCAACATCTTTC AATTACTCATCTCGTATATAAATTTTCTTACGGAACAGGCGGTGGGAAGT GACGACGACGACGAAGACGACGATAATTGGAGCGACACATAGCGCACACA TCACTTTTCGCCATATTGGTGTTTTTTCATCGCCAAGTGGCAGATGATGT GCCAAACCAGCAGGAATATCTTGGACAGGGTGCACAACCATGTCATGTTT TGGTCCTAACATTGTTAGCCTTGCCTTTTGTATATATAGTACATGTAACA TGCCCATATATGTAGTACGTCCTTTTGCCATTCTTTCTTCTCCGCATTCT TTTTTGGCCTGATTGTACGTAGAGATCTGATTGTATGTATGCTGC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.