Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA016322

[Submit comment/correction]

Sequence	AA016322
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA016322
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CCGGGCCTCCGGCCCCACGCGCGCGCGTCCACATCCAATCTTCCCGGCAC CACCGGGCTCCCCCGCTGCCACCGCGGCCCCACGTGCGCGCACCCAGCGC ATGCCCGGATCCCGTGCGGCTATTAAAAGCCAACCCCCACCCAGCCCCAG GCGAGGACAACGGCTCGCTCGCTCCAAGCGGCGCCAGCCAACGACAACCC CAAGCCGCGCGCGCCTAGGCCAGGTCCGACACACGCACACACAGACAGAC GCGACGCGCACAAGGAAGGCGAGAGAGCTACCGACGACGCCAACGCCGAG GCACACAGAGAGGAGGTGGAGGGCGGCATGGTGGTCAGGAGGTCGCCGGC GCCGCGGCGGCGAGGGGTGCGGGTCGGCCCGACCAAGCTCGAGGGCCTGC CGGCGGCGTGGTCCGCGCCGGCCGTCGCCGCGGTCAAGGTGAAGTGGCCG GGGGCCGGAGGCGCGCTCTCGCAGATGCTCACGGGGCGGCGGGGTGGCCG CGGGGTCACCGCCCTCGAGCCCGTCGGCGGGGACGGCGCCGTCCGCTGGG ACGCCGACGCCGACGCCAACCGGTTCCGTGTCGACGTCGAGCCCAGCGCG ACCCCGCGAAACGGAGCCGGCGCAGGCGGCAGGACCGAGCGCAACGGCAT CTTCTTCTCCATCCTATACGTGAGTGCTCCTGCTGCTGCGACTCACTACA TACTCCGTTTCTTGCTTGCTTGTCGCAGATCAATCAGCAGCCGCGGGCTC CCAAAGCTGCATCTTTCATGCATAAATTTCATATTACCACGATATCTGCT AGTAATTCTGAAAGAAAAACATCCCAGGATTTCCACCCTTCCAACGATTA ATAGCACCGCTATTTCAGCTACTAACAAACATGGGTTCTGTGATTTCGTT TACTTATTATGCTCTACAATAAACATGCTTAACTTGTGGCTCCAAATTAA CTTTGCAATACTAGGTAAGTAGTATTCTTTTTTTTTCCCTCAGTGATAGC GTTGATGATGTATATTATTACATCGGGTCGGGGTAAGATGTGGACAGCAT TCCTTGTAAATTGCGAGTCTGTGACCGTCGTTTCGATCTACTCTAGAACG CTTCAGGTCAATGCATACCTTTTGGCGATTAGCGGTCAGCAATCCAGCAT TTCTTTATCGAAGAAAAAGCTACTACTATTCAGCATTTGGGGAATAGAAG TCAATGGCCGCGTTAAGCATGGCTCCGTCATTCATACAGTAGAAGCGTTC GTTAACCTTTTGGTGGTGGTGGGGCGATTTTTGTCAAAAGGCATACATAA TGCGAAGGTTGAAACTGTGCGCGGCAACACTGGGTGGGGATGGGGCCACG TCAGCGTCACGTGGGGCGTTCCTATTGGCTATTGGCCAGGGAAAAATGAG TTTGACTTTGGGTAAGCCTCGTTTTAGGTAGGCAGCATAGCATGATCTAT GTAATGACTGTCATGAGGAGTCATGGCATTTATGCTTGAGGGCTGTATTT TAACAGTACAAATCGCTTTCTTGTGTACGTCGAAGCTGCATTCAGTTAGC GATGCTTTATGTAACTTTCGGCCTTAATGTGTGATTTGTCAGTTGGTAGT AACTAACCTTGAGTATCATGAAAAAGTTGGTACTACAACAACAAGTAATT GGTTAATCTTCCTTAGCTCTAACATTACAAGGGTTAATCTTCCTTAGCTC CTAGTATGCAACAGAAGATAACAGAACCCCAAAGTAGGATCCAAAGCATA CCTTAGGAAGGCGTATTCCAAAGTACTTACTAGGAGACTTCCTTTTTAAG CAAAAAAAGTAGAGGAGTAGTAGTAACTTGGGCAGGGAAGTATTGTTGCT TGAGCGATCAGCCTTTGCCATTTAGGCTCCAATCATCATGAAACTTACAT CGGAATCAAGGAGTACCAATCAATCAAAGGCACATCTTTTGCTTTCTTTA GGCTCCACACTCTGCATCTCTGTCAATGCGTAGGCTTGTAGCCATTGCGG AGCTGGCAGCTAAATGAGAATAGCTTTGCGATGCAGGGATTCCAAGAACG AGGGAGGGGGGGCAAGGACAGCCCCGTGAGGCTGGAGGAGATCGGGACAG CCATGATAAGCCTGGAGGAGTGCTGCTGGGAGATGCAGCTGCAGCAGCAG CAGCAGAGCCAGAACCAGAAAGGTGGAGCGCCTCTGCAGCAGCTGGTGGT TGTCCCCATCAGGGTGAGGAAGGACGGATGGGCAAGCGATGCCATGCTTT ATGTAAGCACGAAATACTATCATCCTTCTTTTACTTACGCATCCAACTGT CGGCCAATTGCATATGCCGTGGGATTACTTTTGGGATTCGGAATCCTAAA CACAATCGGCGTTTGCTGCAATTCAGACGATAGGATATACTACTCCAGAT TATGACTTTGTATTAGTTTAGGTTATGAGTCCGACTCCTAATCCAGCATG TAGTCCGTGTTATTCTTCTGTTCATGGCCTATATTAAGTTCAGCCGGGTC CTGGTTTCTGAACGTGCTCTGAATCAATCCAACAGGTTAACGTGGAGCTG GTGGATCTGAACGCGCCCTCGGAGATCATCGAGAGGAGCGTCTCGTTCAG GGAGAAGCCGAGAGCGAGCCTGCCGCCGCCCACCACGATGCGGGACATCT ACAAGAACTCGACCCACCATGAGGTCCTCGACCTCAGGCAGCTGCTCGAC CTCGCCGAGAAGCAGGGCCGGGTGGCGGTGTACAAGAACAAGCGGAACTC CAGCAGCAGCAGCCGGAGCAGCCGAAGCAGCGTCAGCAGCGGCGGTGGCA TGAGCAGCAGCAGCAGCACCGTGAGCCTGAGCAGCGCCAGCACTAGCACC AGCGGGGGCGCCAGCCCGGAGCCCGGCTCCACGTCCAAGCGCCGGTACCT GCCGTGGAGGCGGCGGAGCAGGGAGTCGCTGTCCCAGGAGATCCCGGTCA GATGCGGCATGGTTGATGGTGATGACGGGTGGGAGACGCGCGAGTTCACG AGCAGGGACGCGGAGACGACGCTGAGGACGCCCGTGTTCTTCGCGTCCAT CGACCAGCGCGACGACAGCGCCGGCGGGGAGAGCGCGTGCACGGCGCTCG TGGCCGTGCTGGCGGCCGCGCTCCACGCCAACCACCCGACGATGCCCACC CGGCCGGAGCTGGACGCGCTCATCAGGGACGGCTCGTCCGAGTGGAGGAA GCTCTGCGACGACCAGGCACACATGGAGCAGTTCCCCAACAGGCACTTCG ACCTCGAGACGGTGCTCGCCGCCAGGACCAGGCCCATCGCCGTGCGGCAC GACAGGGCCTTCGTCGGCTTCTTCCAGCCCGAGAGCTTCGCGTCGCTCTC GGGCGCCATGTCGTTCGACGACATCTGGCAAGAGATCAGCACGGCCAGCC GCGCCCCGGGCCAGTCGGACGTGTACATCGTGGGCTGGAACGACCACTTC TTCGTGCTCAAGGCCGAGAGCGACTGCTACTACATCGTCGACACGCTCGG CGAGAGGCTCTTCGAGGGCTGCGACAAGGCCTACATGCTCAGGTTCGACG CCATGTCGGAGATGCACTCCTCGGAGCCGGAGGAGCTGATCGTCACCGGG AAGGAGTGCTGCGGGGAGTTCATCAAGAGGTTCCTGGCCGCCATCCCGCT CAGAGAGGAGTTGCAGATCGAGCAGAGTGGCTGTGATGGGGCAGGCGCGC CACACCGGCGGCTGCAGATAGAGTTCCACTTCACCGTCCTGGAAGAAGAT GAAGGGAGATGATCAGTGTTCAGTGGGTCGTCTTCTCTGCACTAACATAA TCGATGTAAATTTTTATACGGTACAAGAGAAACAGGAATATCAACATTAT CATTACGAGTGACCGCATTTTTGGATAGGAAGTGTAGTAGGCACAGAGAG TTACAGAGTATATTTATACACGGTGTAGTGTAGCAGGCACATGGAATTTG AAGAATTTATACCGAGTTCTTGAGTTCTCTTATTTTTTTCATGTATGTAT GTAGGAAGGAATAGTACAAATCTCCGAATAGAATTGCAACCGAGTAACTG AAATTATATCGAATTCAGCTGTCTGAATCTGTACTGACAAGAACAAAACA GAGGCCTATTTGGAATGCTTTAGTGCTCCTGTGAAAAATGAACTGTGCCA TTCCAAGCAGACCCTGAAATATTCGTGAAAGACTATACACACAGATTACA AGGGAGCTGGACAATCAAAATCCAGAAACACGTCTATGCTACTGCAAATG CTGCATCCCTAAGCTCGTGTCGGCAGAACTGAGCTTTCTACGATTAAATA ATCCAGATGCCCTGATTTTTCTGTCACAAGTCTTGATAAAATCACCAGTG CCTTTTCTTGGGTAGGAATGGATAAATCTCCGGACAGAAGGTGCCCTGAT TCGCTGCGAGAGAGAAAACAATAGTCAGCAATTTTTTTTTTGGATAACGG CAGGAGAGCTGCTGTTTTTCATTGCATTAGTGGAAGCAGGTTACAAAGGG AGTTAGGCCAAAAGGGAGACCTTCCTTACAAAAGAATAGTCAGCATTCAT GGTTTCTGTCCTTCAATGCATACACCGGGATGCAATTGTCCAAAAGAGAC AAACATTGTCATTATAAATATGTAGAATTATATCCAAATCCATCTGTCTC GGTCTTTTCTTTTTCTTTACGAGAGCGACAAAAATAGCAGGCATGCAGAA TGAATGAAGCAAAATGAGCATCCTCCCTCTTCTTCGCTGACTCTGCATGC ATTCTCCAACAACCAATCTCTGGTTCCAAACTCATCGTCTCTCAAATCAA CCAAGGAATACAAGAATGAAAGGTGATATGCTGCTACAGGTAATCCATCC ATCAATCCTTGTTCCTCCTCCCTTTGTGATCAATCAATAAATTAACGCAT GCTGTCGCATGTAGCCTAGTCTCGACAGAGATCATCGCGTTTCTTTCATC CAACCATGGTTTATTATTGTTTGCAGGTGAGGTGAACCATGGATGACAGC GAGATGCAGACGCTGCCCGGCTGCACGTTCTTCCATCGGCACCCTCTCCT CCTCTGCTTCCTCTTCTTCCTGGCCTTCCTCCACGCCACCTTCTACCCAC TCTTTGTCTTTCTCCTCGCATCCTCCCCAATCCTCCTCCTCGCCGCCTTC CTCCTGGGTGCCGTCCTCCTCCACAGCGTGCCCCAGGAACACGACCAACA CGTCTACAAGAAGATTAGCCGCAGCCACGTACTGCAATGCCACATCACAA GCACCGCCAACACTACTATCGGAGCCAGCCACAACAACAGCTCCCACAGT GGCTCTGCTGATTCGCCGCCAACCACCAGTGACTCCGATACCCAGCCCAT TATCGTGTCGACCGCCACCTCCCTTGCCTCCTTCCCTGACGCCATCGGCG ACGACTCCGAGTCAGAGTCGGAGGCGGAGCCCGAGCACCATGAACGAAAG CACAACCACTGGTCTGAGGAGGTGGTGCCTGCCGTGGCGTGGACTGCCGA CGATGCCAAGAGCATTGAAAACATCAGATCCCTCGAGCTCGAGAGGAACA CCACAGTTGAGAAGCTCATGTCCAGGCGCCTCGCCGTCCGCAGGCAATCT CATCGCCGCCGCCACCGCCACATCGCCACGGACCTCGACGATGACGCATC CAGGCTCACCGTTCACGTAGTCAAAAACAACCCTTTCGACCTCGACGTGC CCTACGGTGATGACGACTTCCCCGGCTCTGCGCCCTCCATGCTCCTACGC CCCTCGCGCAGCAACCCCTTCTTCGATGATGACAACGACAATGAACTCCT TCGTCTCCACGCACCCCAACCGCAGCAACAGTCATTGTCCACAGGGGCGT CAGCGCAGAAGAAAGTTGTGCTGTTCAGACGGCACGAGAGCTTCACAGTG GGCGCGCCGTACGCCAGTGACTTCCGCGCGTCCCGCTTCAGGCCCTACTT TGTCACCGAGAAGATGCAGGGCCAGCCGGTCACCATTCCTGAGGCCAGCG GCAAGATGAGCAGTTCCTCGTCTTCGTCATCTTCCTCCTCCTCCTCTGCC GGTGCCAACGCCTATGCCTCTGTCTCCGCCAACAAAGAAGAGGAAGAAGT AGCAGAACAGGAAGCTTTGGCAGAAGCAGAAGCAGCAGCGATGTTGGAGG CCAAGACTGATGATCATCATGAGTTTATTAGGCCTCATGAGGTAGTGGCA GTGGACGTCGAGCTCATTAGTGATTCCTCCGATGATGACATCTCGCTTCC GGAGCACATGAAGGTGCATCAGCAGCAGCAGGTAGCGGTATCAGACCAAG ATGACGACGACGAGGGGGAGTCGTTCGAAGTCGAGAGCATCATGAAACAG GTAGCAGCAGCAGCAGCAGCAGAAGGCAAAGGCAAACAATTGGACACGGA TCCTGCGTATCAGTACAGCCCGTCAGCTGGTACAATGGAGAAGAAGAAAA AGCAGCAGCAGCAGCGGTGGCAGCAGGAGGCATTGGACCAATTACCACCT GTGGTGTCCCCAACTATGGCACAGACAAATAAGCTGGCTTCCATGAGGAG AGTATTCTCAGAAGATGAGGCAGATGAGCCGTGGGCAGCGCCAAGCAGGC CAGAGGAGACGACGGACACGGAGAAGGAGGCCAGGGAGCAAGACATGTTC CTTCTTCCTCCTCTTCCTGAATCTGCTCCTGCTGCGGGTGCTGCTCCTCC TCTTGCTGCTGCCGCGAAGAAACCTGTCGGGAAGTCGAGCAAGTACAAGC CACCATCCAAGAAGGCAGTCTTAGGATTCTTCCGGAAGTGACGAGAAACC CAGCCCTACTGCTACTTCCTCTTCCTTTTTCTTCCTTCACAAGTCTCTTC TCTTCTCCTCTGTTTTGTATACACCACATGTCTGTATACCCTCTGGGGAA CTCCATGTAAAGCATAGAAAAAAGATAACCAAGGAACAAAGCGATACCTT TTTTACAGATTCTTGCCTGTCCTCGCTTTGTAAATTATGTAGAAGCAATT CCTTACTTCATAACCTAACGAATCTTTATGCTTTAGCAATACAGCACGCC AATCTCATTCTGTTGCATGTCAGGAAGCCTCCCTATGTACTCAGATTCAT CCCCTAACAACCAAGCAACAAAAATGCCCAACACCCACAACCCTATATCA CACCTCATCCTTCTATGCCTCACATCTTTCTGCATTCAAACACCCAACAC CATGAATTCTGCTCTCACGCTATTCTCCTTCCAGTCTCCCTCTTTCAACC AAAATCAGTGCCCACTGTCCCGACACCAGCAGATAAGCGCCAACTGGGGA ACGAGGCAACAATGGTCGCCAAAGCCCATACGAGCAATAGTAGGGTCAAA TGCAACCGGGGGACTTAGCAATGCATACCGTGGAGGTAACACATTACCGT CTTCACCCCTGACAGATGTGATTCAGGAGTTCTACTCCTCCATCAATGAC AAGGACATCACACGGCTCAAGAAACTGCTTGACCCTGATTGTGTCGTCGA GCACGCTTCATATTATAAACCGCTGGACGTCAAGGTTTTACTCGCACATC ATTTTCTCATTCTGCTCCAATATCTCATAGTTCAGTCCTCTAAATATTTG AACATCAAGCTATTAATTTAAAATCAAGTTCCCATTCTCAAGAGTTCAAA AACAACTTTGCTGCATGCAGAATACCCATACCTACTTCACAAGGCTTATG GTAGCTATGAGGAAGAATGTCAAATTTGCTATTGATGACGTTTGTCAAGG AGTAGAACCCACTGTCGCAGTAATGTGGCACCTTGGTAAGATCCTGCATC TAGGAATTCGAATTATAAGTGGCAGAACATTCTGGTACATAACAATGATA TCATCTTGTCACAGAGTGGAACAATAAGATCATACCATTTACCAAAGGCT GCAGTTTCTACATGTGTGCAGAAAATGGAGAAGCGCTTCTTATTAGGTAG TTGGGATTCATACCCACCCGTGACAGCATATATTCTCTAATTGCTACAAT ACCGTGTTGTTTCCATCCATGTCAGCCAAGATCTTGGAACTATAATGCTA TGGTGGTTATATTTCTTATTGTTTTTATTTCGAAACAAGGATTTGGCCTC TGGCTAATTTTCATTTGGAGGTAAAGTTTCCCCTGGCCTGAGATGTAAAT GTTTTCATCCACACTGCAGGAAAGTTCATATCTTCAACGAGTCACCTCTG AAACCAGGAAAGCCAGCATTGGTACGCATACTAATGAGCTTATTTTTCCT GCTGCATCCAACTATGTTAGTCTGATTACCATACATCCAGCTAATTGCCT TCCATGCAATATTTTGATTCTTACAGGAAATACTTCTATTCATTGCCGTA TTGTTCGACACACTTCCAAAAGAAGCTGAAGGTATGTATTTCATGAATTC AACTGTTTATTATAAACTAGTACTACTTGAAATTCAGCTAAGCATGGAAA TACATATGCAGCATTTCTACAGAATCCAGAAGCACTAGTTCGGTCAATTG TGAAGCTTTATAAATTCTGCATGGAGCCTTTTGTCGTCTATCTTCTTTCA TATTATATCCGCTTCTGGTCATTTGTGGCACAAGGATTGACTATGGTGCT CGGCTTTTTGTATAACATATTCAAGCGGTTCATGTAACGAACTAATACTA CAGAAAATTCATATTCAGAAGAATAGCGATTCTCAAAGATACGTTGTGTG GTTGTAATCAATTACCGGTAACATCACGAGTAGAAGGATCAGCAAAGGGC CTAGAAGGATCATTTCTTGTGATCTTTCAATGGCCCAGAATCTTCCACAT GATGTTCGTTTGTTTCCCGAGGCGTATCCTAGTATTGCTCCTGCGAAACA GAAATGGACATCATTTCACTCTTACAAGAAATGGCTGTTAGATTAGAGAC ATATATAACGACAGGATATTGCTACAAGACGTACTGAGCAATACTATTGC CATATTCTACTATTTTCTTGACAACATTAAATAAAATTGTCCTAGAAATT CTTCC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.