Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA035196

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Sequence	AA035196
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA035196
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AGAGTGACAAACAGCATATATGGCTCTTCGGTGGTTCAACTACTTGAAGC AGGAAATGTCTTCCTCAACACCTACTTCCAGTTCTTCCAGCAGGAACCGC GAGAGCTCCCGGGCAAAGGTATTAGCACAGACAACACCTACTTCCAGTTC TTCCAGCAGGAACCGCCAGAGCTCTCGGGAAAGGGTATTAGCACAGACAA CCCTTGATGCTGAACTCAATGATCAATATGAAGAATCTGGTGACTCCTTT GACTACTCCAAGCTATTTGAAGCCCAACGGATCGCTCCACCTGTACAGCA AGGGCGGTCGAAGAAGGTCACAACCTACTTGCAACAAATTCAGAAAGGAA AGATAATTCAACCATTTGGCTGCTTATTGGTCCTTGATAAGAAGAGCTTC AATGTCATCGCGTTCAGCAAGAACGCGCCGGAAATGCTTTCACCGGTCAG CAGCGATGATGTAGTACCCAGTGTTGACGATCCCTTAGGGCTAGGCATTG GCACAAATGTACGGTCTCTTTTCACTAAACAGGGTGCCACGTTGTTGCAT AAAGCACTAGGGTCTGATGATGTTTCTCTGCTAGATCCTATCCTAGTTCA GTGCAAGACCTCAGGCGAGCCTTTCTATGCCATTGTTCATGAAGCAACTG TTGGATTATTAGGCATAATTTCCAAGATTAATTCCAGAATATAAATTATG ACAAAACCAGCGACTAGCTCATGTAACTCGAACATACTAGATGTACTAAA CAACAGGATGATCGGAAACAAACAGCAGCTTAACATGTACTCGCAGAACA TGATGAATAACCAAACAGGAGCACGTAGCACGTACCATTCGGTTGTCGTA GTAGAAACTTTGGGGAAGAGTGATCGCAGCAGATGGCGATGAAGACGGTG GTAGGCAGCACCGCCTAACTTGGATGGAAGACGACCCATGATGGAGAACT CGAGCAGTCGCGCGGCGGAGCGCTTCCCAAAAACCTTATTCGCCCTCTCC CGTACAGGATCACAAGGGCGATTGGTTCTGGAGACCTGCTCTCCCGTCCT CCGGTGCACGCCGGCAAGCGGGATGGAGTAGACTACGGTGACGGCGCAAG CAGAGAGGATGGCAAAACCCTAGATTGGTTTTCGATGGTGTTGTGGCGGT ATCCGCGCAGGAATTTATATAGAGCAGCTCAGGAAACCCTAACGGAGGCG AACGTGGGCCGAGACGAGATGAGACGAGCGGGCGGGCGTGCGTGCGTGCG AGCAGCGGCGTCGGAGGAGGAGGAGCGCACGCGTGTATCTCTCTTACTGC TACTCACTTACAAAGTGGTGCAACACTCCACCTTATAAGGTGGTGCAACT CTCCTCCAACTTTCCATGTGGGACTAAACTTGAGCTCCCACTCCACTTCC ATGTGAGCTACCATAAACATGGGCCCAAACACATATGGGATGCCACAAAT TTGGGCTTTAAGATTTAGGGAAAATCTGAAATACACATGGGCCTAAATGA ATTGGCCCATTATTTCTAACAATTCCCCACCAGATCTCAAATGCCTATTT GAAGATTTGCCAATCCTTGCTACTTATTTATATACCAGTGTTTCAGCAGA GACTGTTAAGTTGAACTTCCGCCTAGAATCTTGAACTACGTCTATCAACA ACTTGAATAATGGAAGAACCTTGAATTGCAAGTTTGGTTCCAATAGATTT CACTTAAAATCATAACTAGTACCTGGCTACCAGTAGCCTACCCCGCGGGT TGGAGCATATGCGTCATACTCTCTGGTCTCTTCATGATTTAGTACAGATC ACCCAAGTCTCATAGACCGCGACGTTTACAGTCGAGCTCATATAGGTGTG TTCTTTCAAGAATGCCATGTAGGACGACATCTTTGCTAATTAAAGCCAAC AGAAACACATTAAGGAATGTTTCCAACCTACCTTACAGATTATGATATTT ATGCATCTTCACATAGAGAAGGTTATAAAATACTCTCCTCCGTCAAACCA CTAGCTTGTTCTTCCCAGGTCCTAATTCACGAGATCTCCGATCACATAGG TTGGGTTACCACTAAGGTGTGACATCCATGGGTCTCAACCCCATCTCCCT CGATGCATTTTCTACCACATTTCGTGATAGTCCCTTTGTAAAGGGATCTG CCAGGTTTTTGTCTGTTTGAATATACGTAACAGTTATTACTCCGGAGTTT CTCAATTTCCTGACAGATTTCAAACGTCTCTTCACGTGTCTTGATGACTC GCGTTATCCTTAGAATTGTTTACTTTGACAATAACAGTTTGGTTGTCACA ATTCAAAAGGATTGCTGGCACAGGTTTCTCAACCACAGGCAAGTCCATCA AGAGCTCACGCAGCCATTCTGACTCAACAATGGATGTGTCTAAAGCAGTA AGTTCTGCTTCCATAGTTGACCTTGTCAATATGGTTTATCTATGAGACCT CCATGACACTGCGCCACCTCCAAGGGTAAACACATACCCGCTCGTGGCGT AGAGTTCATCAACGTCAGAGATCCAATTCGAATCACTATATCCTTCAAGT ACAGCAGGGTTCCTGAATAGTGAATCCCATAGCTCATTGTACCACATAGA TAGCGGATGACCCTTTCAAGTGCATGCCAATGATCAATACCCGGGTTAGA CATGAACCTACTCAACTTGCTCACAGCAAAAGAGATATCGGGTCTTGTAG CGCTTGCTAAGTACATGAGAGAACCAACAACTTGTGAATATTTCAGCTGA TCTGTTGGTTCTTTCTTATTCTTTCATAATGTCAAACTGGGATCATAAGG TGTTGGAGAAGTCTTGCCATCATTAAAGCCAAATCGGCTCAAGACCTTCT CAACATAATGATATTGCGTTAAAGTAATCCCATTCTCGTTCTTAATAAGC TTGATGTTCAGTATGACATCAGCCTCTCCCAGATCTTTCATATCAAAACT CTTTGACAGGAAAGACTTGACTTCATTTATCACTTTCATGTTTGTACCAA AGATCAGAATGTCATCCACGTACAAACATAATATAATGCTATCGCCCCCA CCATGGCGATAGTAAACACACCTATCAGCCTCATTAATGACAAAGCCAGC AGAAAGTAGAGTTCTGTCAAACTTATCATGCCATTGCTTAGGTGCTTGTT TCAGGCCATATAAATATTTCAATAACTTACACACCTTTGTCTCTTCACCT TTTACCACAAACCCATCTGGCTGATCCATATAGATCTCCTCTTCCAACTC TCCATTAAGGAAAGCTGTCTTCACGTCCATTTGATGAACGAGAAGACCAT AAGAGGCAGCCAGGGATAGTAGTACTCGAATGGTGGTCAGTCTAGCGACA GGTGAATAGGTGTCAAAGTAATCTTTGCCTTCTTTCTGTGTGTAGCCTTT AGCTACAACACGCGCCTTGTACTTCTCAATAGTACCATCAGGCCTTAGCT TCTTCTTGAACACCCACTTACATCCCACAGGTTTACAACCATAGGGTCGT TCTGATAATTCCCAAGTTCCATTAGAAAGAATCGAGTCCATCTCATTTTG GACAGCTTCTTTCCAATCATCTGCATCAGGAGATGCATATGCCTTAGTAA TGGATCTGGGAGTATCATCCACAAGGTACACGATGAAGTCATTACCAAAG GATTTTGCAACCCTCTGTCTCTTACTCCTCGTGAGAGGTTCATCGTCATC CTTCTCAAGAAATTCCTCATCTGGTTGTTCAGAATTCTCAATAGATGCAC TAGATTCAGGAAGTATTTCAGAAGAAATCCTACCAATGCTATGCATATAT TTCATAGGAAAAATATTCTCAAAGAATGTTGCATCACGAGATTCCATTAT AGTATCAACATGCATATCAGGTACCTCAGATTTAACCACTAGAAATCTAT AGACTACACTCCGTGGAGCATATCCTAGAAAGATACAATCCACTGTCTTG GGTCCGAGCTTGCGTTTCATGGGGATCGGTATGTTGACCTTCGCCAAACA CCCCCAAGTGCGCAGATACGAAAGTGATGGTTTTCTCCCAACCCACTCCT CATAAGGAGTCTTTTCTTTATTCTTGTTAGGAACTCTATTCAGGACATGA CATGAAGTCAACAAAGCCTCCCCCCACCATGCCTTCGATAAACCAGCAGT GGCTAACATGGAATTCACCAAGTCAGTCAGCGTGCGGTTTTTCCTCTCGG CAACCCTGTTTGATTGGGGCGAGTAGGGAGGCGTCCTATCATGAATAATT CCGTGTTCCTGACATAATTTGTCAAATATTTTGGGAAAATACTCACCACC ACGATCTGACCTAAGACGCTTGATCTTTCTCTCTAGTTGATTTTCAACTT CGGCCTTATAGATTTTAAAGTAGTCTAAAGCCTCATATTTAGTTTGCAAC AAGTAAACATAGCAGAATTTTGTAGCATCATCTATCAACTTCATGAAATA TATCTATTCACCTTTTCTCAACACACCATTCATCTCGCATAGATCATAAT GTATGAGTTCTAGAGGTGCCAAGTTTCTCTCTTCGGCAGCCTTGTGAGGC TTTCGGGGTTGCTTTGATTGCACACAACTATGGCACTTAGAACCTTTGGC AATAGTGAAATTCGGAATTAAACTCATACTGGACATCCGAGATATCAAAC CAAAATTAATGTGACATAAACGAGAATGCCAATTACTGGTATCATCATTA ACACCACCACAAATATGATTCACGGATTTATTACAAAACTCTGAAAGTGA AAACCGGAACAAGCCTCCGAACTCATAACCTTTACCAATAAATTGTCCAT GTTTCGAAACAACGACTTTATTAGACTCTAAGACAACCTTAAACCCATCT CTGCAAAGAAGGGAGACACTAACGAGATTCTTGTTCATAGTAGGGACATG TTGCACGTTCCTCAGCTGCACGATCTTTCCGGAAGTAAACTTCAGATCCA CCGTGCCAACACCACGAACAGAAGCATGTGATCCATTCCCCATTAGGACG GAAGAATCCCGAGCGACCTGATAAGAAGTTAACATAGAGATGTCAGGACA CACATGAACATTAGCACCCGTATCAAGCCACCAACACGGTGATGGAAATA CTGAAAGAACAGTAAATAAATTACCATACCCATCAGTATTGCTAGCGGTC ACGGCGTTGACAGTCTTGGCCTTTTTCCCTCTACGGCCTGCGCGTTCTGG ACAGTCCTTGGAAAAGTGGTCGGGCTCTCCACAAGTTTAACAAGACAGTT CACTCTTGTCCCTGTTCGTCTTCTTCTTCTTGAAGGTTGTAGTCTTTACA TGCTTGTTAAAGGAGGGTTTGAAGTTCCCTTTGTTCTTGCCTATAGATTT GCCTTTCTGCACAAAGTTGGCAGTAGCATGACTCTCTCCTTTCTCAGTAG TGTCCTTAGCCTGAGCCTTCTCCTCAACATCAAGGGACGCTATCAGATTT TCAACTGATATATCATGTCTCTTCTGTTTGAGAGTTGTGGCAAAGTTCCT CCATGAAGGGGGCAACTTAGCAATAATGCAACCCGCCACAAACTTGTCGG GTAAGGTACACTTAAGGAGTTCGAGATCTTTGGCAATGCACTGTATCTCA TGAGCTTGTTGAACCACAGGAAGATCCTTTGTCATCTTAAAATCATGAAA GCTCTCCATGATATACAGTTCACTGCCAGCATCTGCAGCAACAAACTTTG CATCTAGTGCATCACAGAGCTCCTTCCCGTCTTTTATGTGCATAAACACA ACACACAGACGGTCAGCAAGAATGCTCAGAATACATCCTACAAAGACAGT ATTAGCATCCTCGAACTTCTTCTGATCCTCGTCAGATATAGTTCCTTCAG GTTTGCCTTTGCTGATATGGAACACTTTCATCGTGGTTAGCCAAAGCTCA GCCTTGTACTGCCACCTCTTAAAGTGCACACCGGTAAACTTATCCGGCCT CAGTGCGTCGGTAAAACCAGCCATTGTTAATTCAGGAAATTGCCTACAAT AAGGTTTTTAGATTGTTGGATTATTAGGCATAATTGAAGGGTTTCGCGGC ATAGTAAATCAAAATTTTCTATGGAAGCGAACAGAGGGAAAGCCAAGATC TAATCTAGGAGATGCAAACAACGAGAGAGATTGGATTAGATCTTCATACC CTTGAATATTCGCACAGCGGAACGTTCGTCGGAACGTGGGTGATGTAGTC ATACTCGCTTCTCCTCCTCGCGATCCGATCCGATCTAGCACCACAAATGG CGGTGCCTCCGTGAGATGCACACGTGCAGCACCTCGATGTCTCCTCCTTC CTCGGTCCAGCAAGTATGGTGGAAAGACGGATTGGATCTATAACACGATG GCGTGGTGTATATGGTGGAGAATTTCTGCAGCAGGGCTTCGCCTACAAAC AGTCGGGAGGGAGAGAGGAAGGGCAGCAGGGCGGCTAGGGTTGGAGGGGA AGGTGTGGGGGTGGTGCGCCCCCAGCCCTCTTTATATAGAGGGGTGGGGC GCAGCCCTAGCCCGTCCCCCAAGCCCAAACTGGCGGCCCCAAAGGAGGAG GAGTGGGGGGCAAGGAAACCCCCCTTCTAGAAGCTCTATCTAGGGTTTAA ACCCTCTTTGGCCGGATGGGCCCTATAGGGCCTTGTGCCCCTGGCCCAAT GCGGCCAGGGCACTCCCTCATAGGCCCATTCCCCCTCCCGGAAGGTGGGG CCACGTTGGTCCCCTTCCGGAAGGTTCTAGAAGCTTCCGGTACAATACCG ATTAACCCGGAACAATTTCGAACTCCAAAAACTGCACTGCTTTATATGAA TCTTATTCTCCAGACCACTCCGGAACCTCTCGTGATGTCCCGGATCCCAT CCGAGACTCCGAACAAAAACTCATAAACCAATCATCCAATCTATCCTAGC GTCAAGACACGTTAAGTGTGTGACCCTGCGGGTTCGAGAATATGCAGACA TGATCTTCTATCAATAATCAACAGCGGGGTATGGAAACCCATATTGACTC CCACACATTCATCGATGATCATATCGGATGAACCACGATACCAGGATTCA ATCAATCCCATATATATATTCCCTTCATCTCGCGATATTTTACTTGCCCG AGATTCGATCGTCGGTACCGTCATACCTAGTTCAATCTCATTCACAGCAA ATACTTTACTCGTTCCGTAATCCGATATCACTTTGTGATTAACTCCTTAA CCACATGCTTGCAAGCGGTGTTGATATCGATTACCGAGTGGGCCCGAAGT ATATCTCTCCGACTTGGGAGGGACAAATCCCATCTCGATACATACAACCC AACAGATACTTTCCGATCACCTGAGAGACACCTTTATGATCACCCTCTCA TAGGATGACGTTTGATGACCTCAAAGCTTTCTTCCGATACCAGGGAGTTG CATGGTCTAAGGAATACAATATTTGACATAAGAAAAGCTTCACAAAGACA AACACGATGACACGATCTAATTTCTTCGCTTAGTTTGGGTCTGTCCACCA TATCATTCTCCCAATGATATGATCTCATTATTAATTGACAACTCATGTCC ATGGTTAGGAAACCTTAACCATCATTAATCAATGAGCTAATCCTTAGAGG CGTACTAGGGAGACGGTGTTGTTCACAAACCACACAAGTATTAAAGTTTC CGCTTAATACAATTCTAGCATGGAATATAAACATTATCATGAACAAGAAT TATAATAATAACATCTTTATTATTGCCTCTAGGGCATAATTCCAACAATA ATTTCCATGATTAATTCTAGAATATAAATCACGACAAAACCAGCTACTAG CTCAGGTAACTCGAACATACTAGATGTACTAAACAATAGGATGATCGGAA ACAAACAGCAGCTTAACAGTGTAGGGATTCGTAGCATGGAAAAACAAAAA AATTCTACCGCATACAGACAAACAAGCCAAGATCTATCTACTAGATTGTA GCAACGAGTCGATGGAATAACTCACCCTCGAAGATTCCAAAGTGTTTAAC GAGAGCGGATTCTCGTGGGTGATGTAGTCGTACTCTTGTCGATCTCAAGA TCGTGTAGACGATACTTCCGGCGCTGCATTCCGGCAGCGCTTCCGCAGTC GGTCACACGTTCGGTACTCGACGAAGACCTTCCTCTCCCTTGTTCTAGCA GACAGCGGAGGTTGTAGCACTCTCCTCGCGATTCCGGCAGCACAACGGCG TGGTACCGGAAGTAGAGGGGAGATCTCGCAGGGCTTCCCCTTAAGCCGGA GCGAGTATGGTGGACTATGAGAGAGCCCTCGGTGATCTAGGGTTTAGACA CACCAAGGAGGAGGCAAGGCCGGCGGCTAGGGTTTTCCCTAGGCGGCGGC GGTTATGGTCGGCGGCAGCTAGGGTTAGGGTTTAGAGGGGCGTGGTATTG TGTCTTGGAGGGGCAGCCCTGCCCCTCCTTATATAGGTGGAGGGGGCGCG CCAAGGGGAGGGGAGTCCCTCCCCAACTCGGTCTCCAAGTGGGTCGGCGG TGGAGGGAGGGAACTCCTCCTCAAGTAGGTTTCCTACTCTCCCTCCACCT CACAAAATAGTTGTTTGACTTTTCAAATTGGCGTTTGACTTTTCAAACTA GGATTTGATTAAACCCTTTATTTTGTTCAGCGATGACACCTAGTACATGA TGAAAACATTCCAACTTGTTATGACACATTCATGTACCCTTCCCCTCCGG AGTGCCGGACATTTTGGAACCTTCTAGAATATTCCCGACAAAAACACCGG AACCATTCTCCAACCCCGAAGTAGGACTTTCCTTATATGAATCTTATTCT CCGGACCATTCCGGATCTCCTCGTGATATCCCGGATTCCATCCGAGAATC CGAACAACATTCGGTCTCTTACTCATCATTCCATAACTACTCAAACAACG TCGAATCCTTAAGTGTGTCTCCCTACGGTTCGTGAATTATGCGGACATGA TCGAGACACTTCTCCGAAAAATAACCAATAGAGGAATCTGGAAATTTATA TGGCTCCCACATATTTCTACGATTACTTTGCGATCGAATGAACCAGTTAC ATACGACACCAATTTCCCTTTGTCTCACGATAGTTTACTTATTCGAGGTT ATGATCGTCGGTATCTCTACATACCTAGTTCAACCTCGTTACTGATAAGT ACTCTTTTCTCGTTCCCGTGATATGTGATCCCTTGTGAGCTAGTCACATG CTTGCAAGTTAATTGGATGACATTCCACCGAGAGGGCCCAGAGTATATCT ATCCGTCATATGGATGGACAAATCCCACTCTTGATCCATGTGTCTCAACC AATACTTTTTGAACACTTAATGCCACCTTTATAGCCACCCAGTTACAGTG TGGTGTTTGATGTCATCAAAGCATCCTTCCGGTGAAGGTGATATGCATGA TCTCATGGTCGAAGGAATTAGGTTACTATGTATCAGAAAGCATATAGCAA TTGAACTATTAAAATGACTTGATCTTTATGCTACGCTTATCTATAGGAGT ATGTCCACCATATCATTCTCCTAATGATATGATCTTGTTGTTAATAACAT CTCAATATTCATGATAGGGAAACCACAATCATTTACTAACCAACAAGCTA GTATTTATAAAGAGGCTTTACTAGGGACTCTATTTTAGTTTACAAATCAC ACAAGTATTAATGTTTCCTTGTTAATACTATTATAGCATGAATGTAAACA TTTATCATAAACACAAAGATATAATAATAACTATATTTATTATTGCCTCT AGGGCATATCTCCAACAAACATGTACTCGCAGAACATGATGAATAACCAA ACAGGAGCACGTAGCACGTACCGTTCGATTGTCGTAGTAGAAACTTTGGG GAAGAGTGCTCGCAGCAGATGGCGACGAAGACGGCGGTAGGCAGCACCGC CTGACTTGGATGGAAGACGACCCGTGATGGAGAACTCAAGCAGTCGCGCG GAGCGCTTCCCAAAAACCTTATTCGCCCTCTCCTGTACAAGATCACAAGG GCGAGTGGTTCCGGAGATCTGCTCTCCCGTCCGCCGGTGCACGCCGAATG GAGTAGACTACGGTGACGGCGCAAGCAGAGAGGATGGCAAAACCCTAAAT TCGTTTTTGATGGTGTTGTGGAGGTAGCCGCGCATGACTTTATATAGAGA AGCTCAGGGAACCCTAATGGAGGCGAACGTGGGCCGAGTCCATGTTGCGC ACGTTCGGGTCGGTTAGAGTAGCCCATGATCCGGGAGCGACCCGAATAGG CTAATTGTTTGACACGTGCTCGGCTCGGCGAGATTCCCGCAACCCGCGGA GCGCGCACGCGTCGCGTCGGGCGGGCAGGTGGGCGAGCGTCGTCGGAGGA GGAGCGCGCGCGTGTATATCTCTTATTGCTACTCACTTACAAAGTGGTGC AACACTCCACCTTATAAGGTGGTGCAACTCTCCTCCAACTTTCCATGTGG GACTAAACTTGAGCTCCCACTCCACTTCCATGTGAGCTGCCACAAACATG AGCCCAAACACATATGGGCTGCCACAAATTTGAGTTTTGAGATTTAGGGA AAATCTAAAATACACATGGGCCTAAATGAATTGGCCCATTATTTCTAACA ACAACTGGTTGTTTGGTGGTATACTTTGAGCCTGTGAAGCTAACAGAATT TTCTGCCACTGCCGCTAGGGCTTTGCAGTGTTACAAGCTTGCTTCCAAGG AAATCTCCAAGATCCGGTCACTTCCAGGTGGAAGCATGGAAGTGCTATGC AATACTATGGTTAAGGAACTCTTTGACCTTACTGGGTATGATAGGGTTGT GGCTTATAAGGTTCATGAAGATGGCCATGGCGAGGTCGTTGCCGAGATCA CAAGGCCTGTTATTGATCCTTCATCTCTAGGTCCACACTATCCAGCTACT GATGTTCCTCAAGCATCCAGGTTTCTTTTCATGAAGAACAAACTATGGAT GATTTAAGATTGCCGTGCGTGCTCCATAAAAGTCGTCGAAGATGAGGCAC TTCCCTTTGATATTAGCTTGTGTGGTTCAGCTCTCAGGGCATCACACAGT TGTCACCTTCAGTACATGGTGAACAGGAACACCATTGCCTCCCTTGTCAT AGTTGTTGTGGTCAATCACAATGAAGAGGAGGATGAAGGCGAGTTTGAAC AACCAGCACAACAGCAGTATGAGGAGAAGAAGAAATTATGGGGCCTCCTT ATTTGCCACCATGAGAGCCCCAGGTATGTCCCTTTTCCACTGCGTTATGC TTGTGAGTTCTTAGCACAGTTCTTTTCTCTCCACATCAACAGGGAGTAAT TTGAATTAGAGTGGCATGCCAGCAGTTACGTGAGAAGAACATATTAAGGA TGCAAGCAGTCCTCTCAAACATGTTGTTCAAAGAAACCTATCCCTTGACT ATCGTATCATCTGGGACACCCAATGTCATGCACCTAGTC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.