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GrainGenes Sequence Report: AA013565

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Sequence
AA013565
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA013565
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CCACAGCATTTGGTACCGGTCTTGAAGAACAAAGAACACCGTCTTCTCTC
TCGCTTCGCTCTGCAACTCTACTAGCTGTCTAAACGTGAGAGAGATGAGT
TCTAGAGAAAGCGGCCAGGATGGCCAACGAGGAAAGGAGATCTTTCAAAG
GGATGTGGCCGAGGCGGTGGCCTTGGTGATGAAGATGAAGTATGGAGAAA
GTGGCCAAGGCGGCGAACAGGATTTGAAGATGTTTGAAATAGCGATGGCC
AGCGTGACTGACCATTATTATAGAACATGGAGCCAGGAGGACGGCATTCT
ATCAAGGATACTATTTGAATATGCAGTGAGCAAGGCGCTGGAGATTATCA
AAGCTATGAAAGAGGCGCGGGAGATTATCAAAACTGAGAACAAGTTGTTC
TCTCCATTCTCAGTCTATGCAGTAAGTTCGTCCCAATTACTACATGAATT
GTTTTTTTTTTTGCGACAAACAAGTATGGTGAGCTTTATTATTTAGGAAA
TAGAGTTCATAAAACCGAGATTTATGGAAGCAAATCATAATATTGTTTCG
GTCTGATATAATTTCTTGTTTCCCCGATATCATAGGCCATCCTCCTTTTC
AGAAAAAACATAATTCTTGGTATTTCCTTCATGAGGCGTTCCGAGAATCT
CAGGGTAAACTGATGTCGTCTTATTATTAATTTGCAGCCCTCCTCATACG
ATTCCCCCAGCAAATGTTGCTACATAAGTCTAGGGAATCGAATGTACAAG
CTTCGTCTGGGTGATCAGGGTGAAACACTGAGAGAATGTACAAAAGTTCA
CATACCTGCAGAAGATTACGGGCTCAAGGTTCAAGTTTATACGGAGGAAT
ACATAGATGCATTGCGGTTGTTTGATGTTCTGAAACGAGCACGGCATCAT
CTTAAAAATATAAGAGTTGGAGGAAGACCATACACCAACACCATACGGTC
TCCACCACATGGCCGTTCCATCATTGAACCCAGAGCACCACCTATCCAGG
TCGTGGATCGAGCCAGAGGATACGGTGGCTCACAAACTGTGTTCTTTGAT
AAATCAGGCGGCCCCTGTGTCATCATTCCCATTAACCCCTTGCAGCATGG
TGATCAAGGTTTTCTGGCAACCACCCGTAATGGAGAAGTAAGCACACGAT
ATGTATAGTTTCCAAATATGCACATTAAGCAAACCAAACAAACTGTTTGT
TCTTAATCAGCCTCCTACTGGCTTTTATAGTTTCATCTCTTCGAACTATA
CTCTCTACCTCAAGTCCTGAACCCAACCAATCTTCGCCCATTTCCATTTC
TTGCAGGACGGTCCTGGTAAAGTTGCTCAAAACGCTCTGATGTCGGCATT
TGGAGGCATTGTGCCGATGTGCTTCAGCACGTTAGATGACGCCCTCAAGG
ACAACTGTCCTGAATACATCAGGGCTGCCACATACGCTGGGCTGGTGGTT
ATAACTGGAATCACATTTGTCGGGCTCCTTTCCAAGAAGAGGGCCAAGGC
TGCCCTGAGGGTGGTGGCCAGCGCGGCGATCGCCGCGGTGTCCACAACCA
TTGTGTATAAAGTTCCTGAGGATGTATACATCAAGGCCACTTGCGGGGTC
CTGGGGGCACTCGCAACCTTCGTCACAATGGCTATCGGCTGGTAAGAACT
CATTTTCCTAAATACATAAAATATACATGTTCCTTCTTAGTTTCTTGCAT
TGCTATAGAATTATTAAATGTAGTTCGTGGAGATACATCCATTGAATAGT
TCATATTAACATCAAGATTCACGGCACTTAAGGGGTCATCAGATCATGGT
ATGCGTGTGTAATTACGTATCTCACTAGGTCCAACTGACGTGTTGGCGCC
AGCCAGAGGAAGTGCTCATGTGCACACTAAATCTACTTAATTTGTCGATA
GCTCTTGAGCGTTGCAAGTTACAAACGAAGGTTTTAGACAATGTTAGGGC
ATGCTGCCCCTATTTTAGGAAGTTTTTACCCGCCAAGAAAAAAGCGTGAA
CCCAATATGGCAACTTGCACCCCTCCAACATTTGCGTGTCTTGTCTTGTA
TGCACCAGACTTGGACTCCGTCTAGATGGTCCTCATCTCCCCAGCGAAAA
GCGAAGCAATAAAGTAAGAACCCATCACCTTTTTTTTTTGAAAACGGGAG
CAGAGCCCCCACTGCATTATTAATCAGCAAAGGCTTACAAAGATCATACA
AGCTAAAGCCATCTACACAACACCACCTAGCACGACAATAGCAGTTGCCG
GTGAGTTCCGGAAACCACCCAACCGCCCCAGGCAAGTCAGGAGCTCAGTC
TGCCCTATCATATCCTCGGAGCTGTGCCAATACGCTCATTCCGGATGTCG
CTTTCTTTGTTATCTTCCGCTGATCCATCTTCAGGGTGTAGATCAATGCG
AAGACTCTCGCCACATTAGCCACCGACACCACCACGGCGCAAAGCAACAA
CACCTTCCTGCACGCGATCACATAAGCACGTCACGGTCGCCGGCGATACA
CCGCAACACCATGGCAACAAGTATTATCGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTAGGGTTTCCTAT
GGAGCAACACGAGAGGGTAGACAATAGTTGTAAAGCAATGTCTTCAACAA
GTTAACAACCCAAGTCGCCGTCATCACCCAACATGGCCAAGTCGTAGCTT
GGTTTTCACCGGTGACTATGCTCTCCAAACTGATGGACTCTCTTAGCACC
TGGGCACTTTTTTCTTGAAAATTTTAGAACTCATACTCTTGGTCGCAAAA
AATTCTAAAAAGAAATACATAGTCAGATATACACATCCAGAAGTTTCGTT
TTAAAATACATTTGTTAGGCACAAAATTGTAGATTTACACTGCACCCTTG
AGGTGTATTAGGCCACAAACTGTCTTCTTACACTGGTACGTCATCATGCA
CCCTCGATGTCGGGGGCGATATGCCGCGAGAGACAATCTAGTTGGGTCTC
AGTTCCTCGTGCGGGAACCCATCACAGGTTCCGACGACTATAGGAAAAAC
TTGACTGAGTTAGACCGCTCCAAGCTCGGTTGTCGATCTAAGAAAAAAAT
CTAGCCGAAGTCGTTGAAGGACGGAAACAGAGACAAGGGTTTGAGAATGT
AAAAAGTAGTTGTATTGATGTTTGATGCTTGTTTTCTTAATTTCAATCGG
TCGTCTACCTCTTTTTAGATATACCTGAGTCGACTGGACTTTCCGTACAA
GTTTCATACAACTTTTCTACACGTTTACATGACAAAATTCTAGTCAACTC
TAGCTCTAAACTATAAACTAGGTAAGTCTTCGTCCGAGTCTGTACCGGGC
CCAGACTCAAATGTTCGTGTTGACTCTTCCTTAAAACAGGCGTTCACTCC
ACTTTATAAATAAAGCACCAACCATGCATACAAGATCTGAGTAAGAGTAC
AACAACAACGGAAAAGAGACGAGAAAGGTTCGCTGGGGCAACAACACATA
AATTCCTAAAGGGAAAAGCGAAAAAACTAAGTAGGGGTACAGTCCTGCAG
CGGAAAGCTCGGCGTGCCAACGGGTAGAGTAGCGTCAAGGTACCACCAAC
AAGGCATGAATCATGCCATCCAGTTGCTCTATGGACCGCTGCCTATAAGC
CGGGCCACTGCTACAGGAAAGCAAGAAATTTGAAGATCAAATCAAAGACA
CGCCATAGAACCACTCGCTCAATAACCATTTTATTACGAATAGTCCATAG
GGTCCAAGTCATTGCGGAAAACACTAAACAGAAGAAGCGGCGCCTCCTAC
TAGTACGATTTTCCTTGGTTTCGAAGAACTCACCGAAGTCTTAGGCCTGT
CAAGCAGGGTCAAGCACCACTCTCGGAAAAAGCTCGAGACAAACTAGGCA
GCAGGACATGAGAACTTGACGTGAGACCCTGGAGTCCCACAAAGTGGTCA
TAGGCCATCACCAGGCCCGTGACGCTTGGTCAATTCAACACTCACAACGA
GGCGATCTCGTAGGAGTTGCCACACAAAAATATCCTAGTTTAGGGGTAGA
GTCGCCTTCCATAAAGCGTCGTCCATGTGATCAAGGGCCCTCTAAAATAG
ACCTGATACGCCGAACTAACGGTAAAGGTCCCGAGGGGGCTAATCGCCAA
GTGACACTATCAGGGTCATTAGAGAGGAGATATGGAAAGATCACCCTAAA
AGCCTAAAAGGTTGCGGTCTCCTCTGTGCCAGAGGTTCTCCGGAATGTGA
TGTCCTGGGTCCCATCATGGAACGCCGAAGCACAAGAAGCCGCAGGTCAG
CGCAGATCGCAAAGATGTTAGGGAACTCGGACCTAAGTGAGCGCTCTGAG
ATCTAGGAGTCTAGGGAAAACAGAGTACTCTCTCCATTGACAATGGAGAA
GGAGATCCCCAAGCGAATCACGTGCTTGATGTCTTGAATGGATCTCCATA
ACTGAGATCCATCGGCATTCACAAGTCATGAGCGGGCGCCGATAGAGGTA
TTTTTTCTTGATGGGTTGTGTCCAAAGACCCCCATTGTCGCTGAGGATAC
ACCAAACTAATTTTAGCATCAACGTCCATTAAAGTGTCGTGATGCTAAAT
ACCTATGCCCTGAGCTCGTTAGAGGCGCAAAGGTCTGCCTACTTAACCAT
GTGGTACTTTTTCCGTCCATTCATCGCCGACGATAAGAAGCAAGAGAGAT
CTTTATCAAAGCCACCATGAGTACCCTTAGGGAGAAGGTACAATCCCATG
ATGAACATGGGAAGGCTGCATAAGATCCTTAATCAACATCTGAGTATCAC
AGACATGCATCCCAAGATAAGATATGGGGAAGTAAGCCAACCTACAATTT
AGGTTGTCTATAGTTTGTTTCCTGTCCTCATGAGAGTACCCCCAATATCA
TTACCTCACTCTTGCCGAAGCTTGAGTCATGACATGGCCCCAAAATAGAG
AGGAAGGAACTTGAGATTAATGATGTCAAGTTTCGATCCCACCACAATAA
TCATGGTATCATCCACATACTTGAGGTGGGTCACCCCTCCCCCTAATAAT
AATATGCCCTACCACACTAGAGATGAAATCCAAGATCTTTGCAAGGGCAT
CAACTGCGGAGTTAAAGAGAAGGGGGATATGGGATCTCCCTATCTTACTC
TAGAGGACGGTCTAATATATGGGCCTAATTCCCCATTCATATTATAGTAG
TATTGCCACTCATGACAAATTGCATGATCTAGCAAATGACTCTATCACCA
AAGCCGCTCCACTCTAATGCATGACGGAGGAAGGCCTAATCAAAACAGTC
ATAGGCCTTCTAAAAGTCTAGCTTAATGAGCACACCTTTATGGCATCCCG
CCTTAACTTCATTGATGATCTCGTGAAGTGCAAAAGTCCCATAATGGATG
AGCCAACCCTTAAGAAAGGAAAACCAAAGGGAGTTGGGTCAGTCGCTCCA
TAACCGGCGTGATCCAAGCAGCGCATACCTTCGCAAAAAATCCTTTGAAT
GACATTGCTCACCTTGACCAGTCTAAACTGGCGGATATGTGTGGCCCCTA
ACACTTTGGGGATCAAGTTGATAACAAAAATTTTAGGTGAGACATCACAA
ATGTCCCAGTGTAGAACTCCTAGAACATAGGCATGATCACCGGTTCGAGC
TGGTCCCAGCAATTCTGGATGAAGGAAACCGAGAGACCATCTGGTCCCAG
GGACGAATTGGTCTTCATGGCTCTTATCGCTCGTGCTACCTCTTTTGGCA
AGAATGGGCGGGTGAATTTTGCATTCTCATCAGCAGTAACCCTGGCCCTA
AGTGGCCATAGATTTACTACTAATGCGACCCCTGAGAAGAGTTCCTTATA
GAAGGAATAGACATGGGAGGATATATCCTTGGGATTTTCCAAGAGCTGCT
CGCCCTCCCAAAGGCACGGGATCAAACACTTCCTACATTGACCATTGACA
ATGGCGTGGAAGTAGGCCATGTTACAATCCCTTTGGAGAGTCCAGTTCTT
GCGGCTCCGGGGCCGCTAGAACGTCTCCTCCCCCTTAAAGATTTCCATAA
GGGAGGTCGCAAGAGCATATCTCTATGTGACCATACCACTATGGTGAGCC
CCACCAAATCAACTTCTTGACCCAACGTCTGAATCTCACCTAGAGTGGTC
CACTTTTGGAGCCATAGAGCCGCCTCCAAATTAGTCCCCCCAGCGCCACA
TGAACTGACGCGCCAATTTAGCATAGTGGTACTAAAAATCCACCACATTA
TAAACGTGGGGTAGGGAGGGGCAGCAGCCACACACTTTTACTGAAATGCC
TCCACAAATCCCAACTGAGTTAGCCATAAATTCTCGAAGTGGAAGAGGTC
AATCTTAGAGGAGGGGCCCTATATAAGAAAGTAGGGGCATGGTCCGAGCC
AATCCTATTAATTGCACGTAGGGAGCATAGTGGGAAGGGAACCTCCCACT
CAACATACACAAAGACCCCGTCCAGCACGCTTCAAACTGGGTCATGTTTT
GCTTATTGGTCTAGGTATATCTCTCTCTCTCCCACCCACGAGATTTTTCT
AAGAGCAAGATTCGCTATGTAGTCATTGGAATGCTAGGGAGATCCATGTT
CATAGAATACTTGTCATCCGGGGAGCGAATAAGATTGAAATCGCCAACCA
CCATGACTGGGATGTCACATCGATCCTACTTTTACTCGGGTTCCGCTAAG
AACGTTGGTGCCTCTTATGGTCCGTGGGACAATAAACGATAATACCATCC
CACTTAAGGTTTATTCGTCTATGGGTCAGTGCCATAGTCACAAAGAACTC
CCATGGTTCATATCATCTACCTCAAAGATGTCCTCCTTAATGCCAAGGAT
GATACCACTCGAGTGGCCATTAGCCGGAAGCCAATTCCACACAAACTTGT
AGCGATCTAGGACTTCCAACTCGGCAATCGATAAGTCTTGGCATAAGGTT
TCATAAAGGCCAAATATGTCCACATCTTCCTATCACATATAATCCATAAG
CTGTTGCCTTCGGCCCTCTTGCAATCGACCCTATCGTCACAACAACACAT
AGGCACCAAAACCTCCGCCTTCACGCCCCCTAGAGCTTGCAGTTGGTGTG
GTTGGCGGGAAGAGGAACGAATATATTGACTACATTAGAGTGGTGGGCGA
GTAGGGCGCCGCTGGTGTGGAGGTCCTATCTAGAAGGAGTAGGCATGGGC
ATGAAGGCGGGGAAGGCGGAGCTTGGGCGAAGTAGGGATGGAGGCGTGGC
ATGGCTGAGGTGATCAAGGACGCTAGTGGATGGAGGTGGCAGGATTGATG
CAACAAAGAAAGAGCGACAGTGAGGGGGCTGGCGGCGGGGAAGATAGAAA
GACGAGGAACGAGTAGAAGAGGAAGATAAGTAGAAGATAAAGTAGGAGGA
TGTTTCCACGAAGCCACATATGTGGACACGCGTCACGAGCGGGCAGATCT
GGGCATGGGCAGCCCGTCCCGTCCTGGAAAAAAAGCCCGACGGGCCGGGC
TTTTTAGGCCCGCAGGCCGGGCCTAGGCTTCAGATCTGCAGCCCGGTGAG
TGCACGTGCCGGCTTGGGCTTGAAGAAAACACGAAATAAGGGCGGACGGC
TCGAAGGTTTGTGCACTTGGCGGGCCGGGCTTGAAGAAAACATGAAATAA
GGGCCCATGGCCCGAAGGTCCGTGCACTTGGCGGGCCGGGATCAAGCCTA
GTTTTGAAGCCCGACTGTCGGGCCGAGACGGGCTCGGGCCTAGGAAATGT
GCGGGCGGGCTTTGTGCGGCCCGGCCCGAAAAACACCCAGGTATACGAGC
GGGACGTGGGGCCCGCGAGTCATACGACCAGGATGATGGCATCGTGTTAT
TCGCGGTGGAGTAGTATCATTTTCGTAAAATTTATTTTGGGCTATACAAA
AAAGACAAATCTCAGAATACAAAAAATAATTTTTATTCCTACATACATCC
ACAATTTTTTTAAATGTACTTTTTTTGGTAGCCCAAAACAGCTTTTTCTA
CAGAAACTTTGCACGTAAATACAAACTATTTTTATGTATTCAGGAGAATG
TTTTTTGATATTTTTGAAACTTAGAAGTTCTGTTTTCGAAATAATCAAAA
TCAGAGCACTAGTGTGCTCGGGTGCCACGAATCCGTGTCCACCTTCCACC
CTCCTCCTTCAGCAAAATAAAATAAAATAACAAAGCTCCATTAGCAAAAC
AGAGTATGGATAAGGGCAGCTGAGATGACAGACTTGACCATTGCTAAGCG
ACCACCCTTGTAGTTTTGGTTCTGCAGCCTGCGAATCAGTTAGCAGCCAA
TTTTGTCATCTCGAATAACAGTGCAGACCACAAAGAGAACACATGCACAC
TGTCAGCTCAGAAAAGAGGAAAAATCCCATGAATTCCTGAGTTGCTTATC
ATCCCCATGTTCCAAAGATCATTCGCATTTGTACATGTGTTGAGTTAACT
TTGATGTTCGCATGCCGGCCGCTCTCGCTGCCTGAAAAAGGTACTCCTAG
ATAAAACCAGAACGAAAAACGGAGATGCATATACTAGCTGCATTGATACA
TGTATTAGATAAAATGATAGTTGCCTTAATTTGCATAAATGGTTTCCCTA
TAATTTCGGCTACTTGCCTACATTTCCGGGTCATCAGAAGATCATCCTTT
ATGGTTGCCCCCTTCCTAGAGACATTGATCCTTGTGCCCTATATTTGATG
CAAGTTTCCTGGATTTAAATTTCCTAATGAGAGGTTTTAGGGCAGGTACA
ATGGTTTTATCTTAGCAATGCCACATAGGATAGTTACTGAGTTGAAGGAA
AGAGAAACGAAAAAAAGACGTATGTCCTCTCTTAGCTAAGAGATCAACAC
TTAGCAACAATATGTCTCACCATATATTTAGAAACATCTAGTGCTAGAGA
TAAGACTAAAAAAAACCCATTGTATGTTATTTTTTTTGTCATATCAAATG
ACGTGGCAGATATAAGAGCAAGTACAATAATGTCTACTCAGTTGACTATA
GCACTTGCCATGTCATAAACATAAACTCACATTAACCTAAACATAATATT
CACAATAACCTAAACATAACATTCATATTAACAAAAAAATTAGAAACCAT
GGTTCATCGGCACGATGGCCTTTCATGAAGAGTAATACCTTGCAGTCGGC
GGGAGTACATCGTCATCGTCCTCCTCTAGTACGGCACATTCCAACACAAC
AGAGCCATATCCACAGACCGACACACCATGAGTCAGCCACATCCATGCTC
CAACGATACCCAGCAACAGATCTGGCATGAGAGGAGGTAGAAAATGCCCG
AATGCACCCGAGTACGCACGGATGCGCCCGATGCAGGCTAGATGGGACCA
CACCTGGCGGATCCTTATTTCATGGCACCTCGCAGGGCACCACGTACCTG
GCTTGACCAGTTATGGAAAAAGAGGAGGAAAGGGCAAGGAGTCGTCGTGC
CTTGACATGGCGGATGCGCTCTCTCGTGCTCGGATAGGAAGCAAGAACAC
CTAGGTCACCTTGAGCACCGCCGCTTCCAGATGTGGGGTGAGATGGCAAG
GGAGTGATAGGTAGAGTTTTCTCCGAGGGATTGATGCACATAAAATACAT
ACATGAACTTTGTAGTTTATTGATATATATTTTCACATATTTGCAACTTA
TATAATGTTATATCCATATTTTATATTGATTTTTGGCGATTTATCAATGA
TTCTTTTTTTTGAAGAGTCAAACTATGCAAAGTTTGACCAAATTTGTAGA
AAAATATATTAATATTTATAATATGAAATACATATCACTTTGATACATCA
TGAAACATATATTCACATGATATCAATATAATATCGTAGTTTTGATAGTT
TTTTTTAAAGTTTGGTCAAACTTTCATAGTTTGACTTTTCAAAACAAAAA
CCTTAAGCTTTAGGACGGAGGGAGTATGTTACTCCATTTGTCTCTCTATT
CGTATGCTTGGCATATTATCTTTTTAGTCTGGGTAGCATCTATGTTATCA
CTTATGTTATTCTCACTATGAACAGCCTTAGTGCTCTGCATGCGCACTTG
CGAATCGGATGCTTATTGATCGGCTTCAAGTTTATGAAGGGAGTGTGAAG
AATAACGTGCTTTTTTTTTCATCTGCAGGTGATTATCCTTTGCCCAAACT
TGAAAGCCCCGGAAATTGCGCTGCGTCCACATTTTGTTTGACTCTGCAGA
GGAAGAGTCTCGCAAGCGAGCTTTTCACATATAATTAAGATGCGGCCGTC
TCCAGACTTTCAAACATTTCGTGCTTGTCTGTTAATTACATCGTGCTGGC
TACAGAACGTTGAGGTCGAGCTTGGAAGTTCTTCTAGTTGTCACTCGAAT
TTATCTGTAGATTCTTTCTTCTAGAGAAAACGAGCACCAGTTGTCGCCAG
ATTTACTATCCAAGTTGAGAGTGCTCGTCCATTAAATCCCGTA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.