Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA021317

[Submit comment/correction]

Sequence	AA021317
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA021317
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CAAGCTCTTCCTCTACCTTTCGTTTCATGCCACTCCACCCTACCATCTCC ACTACTCCCCCGTATGCTCCATGTCCTCCGAGTTTCGGCGATAGCTCATT ACCGGCCGTCACCGTCCCCGGTTAGGCACAACCGTCGATGTACATTTCGT TGTCGCACTCGTTGCCTTGGACTCTGGTGCTGACATCAAGCTTAGCCTCG CTCCCCTCCCCTCTTCTTCCTCGTTCGTTTCTTTTTGTTCACGGCAATGA ACATTAGCTGGGACGAAACACATGCAAGCCTTATGCGGGAGACATCACTG GAGAATTTTCCACAATGGACGAAAGCCCGACGAAACATTGTCCCGACAAG GTGGAAGGCCTACACAAATAGGATACAGTCATCAAGTAGAGTTTGTTTTT TCTTGTTGACATATATATATATATATATAATTGTTTTTTGTATTCCATTA ATTTCTGTAATAGGTGGCTAAAGGTAGTTGTTCCCACTTTGGCCTCCAGA TCAAAATAGAGAAGAGAAAACCAGATTTTGTTTTGAACGAGGAAAGGTCT CGAAGGACCCAGATATTGCGATTAATCAAGCGGTGGGTACATTTTACAAA GAGGGCTAAAAGAAAAAACACAATAACAACAGGCCCCCACAACTTTGCAC ATAGCACCCTGCAGGAAAGCGAAAAACGCGATCAAGTCCCTGCGAACCGC ATCTAGCTCGCCTCCATCCGCAGCCGCCGGCGTCGGCACCGGGGACGAAC CACTTGGGCCAACAACGGCGATGAACGCCGCGGGGAGGGAGAACACATGC CGCCCACGGCGGTTGAAGAAGCTCAGGCACTGAGGCCTTACGAGCTCGGC GTGGCCATCCTCTTGGCCAGAGATAGCGGGTGGCGAAAAGCTTCCGCTTG GAGAACGCCGAAGAAGACGCAGTATCGCCGCCTGAGGAGAGCACCAGGCG ACCACTTCCTTCGCCAGCAACTTCGGCTTTAGTCCCTCCCTCCTTCTTTC CCTCGCCGCCAGAAGGATGGAGATCTTGCCGTCGTCGCCACCGCGAAGAA ACCCACGAGCTTTTGACCGAGCCGCCCTGGAAGCTCCTCCCACCGCCAGC TCCATCCACTGGAGCATTAAGGAGGAGGAGGCCCAACGACCTCCTGGCGC CGCTCGCCAGCGCCCAAGAGTAACTCGAAGATGCAGTGCCTCGCTGCCGC CCACCAGAACCCAGTCGACTCCCCCCGTCACCACGGCCGGCCAGAGAGGG CTCCGGATCTGGTTGAAGCAGCTCCACACCAACATCCAGCGCAGCTTTAT GCAAGGCGACGATGGTCGCCACCGTCACCTCCCATCCACCATGGACAAAG AGGAGACCAACGAGAAGCCCTAGGATGCTGGGGATCTGGCTGCTCAGAAC CCTAGCTCCGCCTCTAACTACAGGCAAACAACCTACTACCGACATAAAGC CACTACACCTAGTCCTAGCTACCCGGCGCCACTTTCCGTCCAGCTCCGAC CGGCTATTCCGGTGGAGGGGATCCGGGAAGGGCCCGGCCAACGGAGGAAC TGTAGCACTTAGGGAGAGGAGAGGGGAGGTAAGAGAAAGCCAGATGGTGC ATTGCTGTGGCGAACTTTTGGGCAGACCAATAGTCCAAAAACCGGTCGGT CGGTCGGTGCCTGCTTCCTCAACAGGAGACTCATGCACTAGGCACCAAAC CCACGCAGTGTCAGACCATCGGCCACATAACATCCAGCAGAGAAAAGGGT CAACAAGAACAGTAATCCTCATGAGAGCAAAGCTCAATACAGTAGTAGTA CTATAATGAGGAATATTTGAAGACCACGAATTACCAGGACGAATAGTTTA TCTCCGGGGATGCTTTTTTTTCAAGGCGATGAGGTCGACAGCGGACAGCT TCTTGCAGTGCTTGCAGATGGAGACAGAGGCGGCCCAAGATCGTCATCAC CCATCTATATCCATACGATCAAAGAAAGAACGGGTCGATTCTCCAAATAA ATTAGTGATGATGAACAGGTCCAAAGCCACACACACACAAAAGAAAGAAA AAGGGAGCCGGGATAGATAGATATATAGATATAGATTCCATCCTCATTTG CTCCAGCTCTAAGCAAAGGAGGCAACAACCTGGAACCACCACCCAGGGAT CGAGAAGCCTCCTCGCGAAATCCTTGTCTTCTTTCTTCACAATCTGAACC TATTTTTATCAACAGTTCCGGAGCGGACGAGCAGGAGCAGCACAAGTAGC CAGGGCTTCCTGGAAGTGGAGCTGCGTGCAACCTCTTCTCCGGCCGGAGT GGCCGGGAGCCGACAAAAAGCACCATTTTGGGGGGGCTCCTGGGAACCCG CCCTGCGAGCTCCGGCGGATGTCTTCTTAGCGTACTGACATTTGATCATC CGACGGTGCCCGGCCCCGTGGTCGGGGGATGGAGGCGGACGAGCTCCTCA AGAAGATACGGGAGCTGGAGGAGGGCCAGGAGGAGCTCAAGCGGGAGATA GGCAAGCTTGTCCCGGACGGCAGCGGCGGCGGCGCCGGCCAGTCCTCCGC GTCCGCGCGCCGCCCCTTCCCCGCGCTGCAGCAGGCCTCGTCGGCGGCGA GGGGGCGCGCTCTCGCGCTGTTCCCGCACTCGTCGCGCCCGCAGCGCCCA GGCCTCTCCGACAGGCACTGCCACAGGATACTGCAGTCGCTGGGGCAGGC CGTGCACGTCATTTCCCTCGAGGGGAAGGTCTTGTACTGGTGAGTTTTCT TCCTTGGCGTTTCTTTTGCTTCTTCCTAGGTATGTGCCTGCTCAGTGCTC ATCAACTGTTTGATGATATGCTACAGTGGAGTGGTATAGTACAGTTGTAT TATTGGGAAGGTTTTGATATGGAGCGACTGAACGAAAATGCTGCACTCCA AACTTACTAGCTTGAGATAGTGTGCATGCAATAAGTTGTTAAAAGAATGT AGGGTCATTTCCCACCTGGGGTCGCATTCAACTGCTCCTGGATGCAATAG TCCTATCTTGTATGTCATATCCTGTTGCTTCGGAGGTATCTGTCTGCTCA GTGCTCATCAATTGTTCGATCATACTATATGCAACAGTGGTGTGGTACAA GGTTGGGTTGTACTGTTGGAGCGGTTTTGATATGGAGTGACTGAACAAAT GCTGCAGGGAGTTATACAGAGATGAAGACACAACCCCAAACTTTGTTTCA GGTGGACCTTTGATATGATGGATAGTTATCAGGTGGCAAGTTTTGCTGGC ATTTAGTCTTCAAACATAGTACTGCTTATCTTGGTGTGTTTATAATTAGT TTAATGCGCTTGTCTGTTCTGCAGCTTGGCTCAACAGGTAGGAAAGTAAT ATGAAATTCATGATTCACCTGATGGTTCTGATCTCTGTTTTATGCTATGA AACTACATCTCTTACGAAACTCTCCCATATTTGCTGTAATGTAGGAACCG GTTTGCCGAGCATCTGTATGGATATTGTGCATCAGAAGCAATTGGCCAGG ATCTCCTTGAATTAATCTGTGATCCTGCTGACTTCAGCCCAGCACACGAG ATTATCCGGAATATTTTTATGGGGAAGTGTTGGAGAGGGAAGTTTCCTGT TAAGCATAAGTCAGGGGAGCGGTTTTCTGTTGTTGTGAATAACACTCCAT TATATGATGATGATGGTAGCCTGGTGGGCCTCACCTGTCTGTCAGGTGAT GCACGGATATTAGAGGAAATAGTTCGTCCTTCACTCCTAGGGAAATCGTA TCCAAATTCAGCAATAGGTAACAACAGGCTCAAAAGTGCCTTGCCGAATA AAGGTTCATCTGACTCCCGACAACCTTACCAATCTGCAATCACATCCAAG ATAACAAATTTGGTGAGTCGCATTTCCAAGAAAACAGAAGAAATGACTGC ACTGTTGGTTTCAGTACAATGTTTCTCTTCTGGTATTTCTTCTTAATGTA TTTCCTAGTGTATTCTTTTCTTGATTTCTAGAATGACAACACAGGCTTCA AAGGTTACAAGTAGAGTTCGTTCTCGGATCAGGGCAGGTCAGAATTGTGA CGAACAGCATGGTAGCAGCCGCGAGGGTCAGGAGTCTGATCATGATGCCA GAGAGGAGCCGACATCAAGTGAAGCAAGCACCCCAGGTGGGGATGTATTG CATGGTATCTTTGTTACCGAAGAGAAATCACCTGGGGACTCAAGAAAAAC AAACAGTGACGATTCAGGAGAAGGAAAAGGAGGATTTCAGAAGATTTTTA GTGCAAAGGCAGAGGCATTATTGGCCAAGAAGGGGATATCATGGCCTTGG AAAGGAAATGAAAATGATGGTGTTTGTGGAAAAAATAACATGACTTCACC ACGGTTACATGATAATCAAGAGAACGCCATGAGTCATCAGGGAGTTCCAA TTTTAGAGCCCATCATAATTCCAGACAGACAGGACACTGAATACGCCCAG GCAGGCAAATACGAGGTCTCAGGTTCCTGGTGGACTTTCAACAATAACAG CACATCTAGTACCGTGAGTAGCACTATAAGTAGTAATAGCAGTGCTATCG AGAGAGTAGAATATGAAACAGACTGCCTAGATTATGAAATCTTATGGGAA GACCTAACGCTTGGAGAACAAGTAGGTGAAGGTAGTTACTTCTCCATTTC CGCTTGTTTTCTTTCTATTTTTTAAGATAAAACCTGCAAATCCTCCCTGT CTGCACATCTGGGTACTTACATCTCTTGGTGACATGTAGTTCGATATAAT TAATACTGTATGCACGCTAGTATTGTCATATTTTCCAATATATATATATC ACTCATTTCTGCTTTGTTGGATGTTTGATCCACGCAGGTTCTTGCGGAAC AGTGTATCATGCTTTGTGGTATGGATCGGTATGCATATTCTGTCGTGATT ATGAATAAATGTTTAAATCTTAAAAAAAAATCTGAATGTGTATCCATGCC CCTGTAGGATGTGGCAGTTAAAGTATTCTCCAAGCAGGATTATTCGGAAG AAATGATACGTACGTTCAGACAAGAGGTAGACATCCATATCTAATTACAC TTCCTGTTGACTCTCAGTGGAATATTTTGTGAACAGCGCAGTAGTATAGC TATTATATTACTGAGTCAGATACTTTAGTAATTGGAATCCCTGGTTATTG TTGTTTTTGCTATTCTATTTTGATGTTATCACGTGGATTAAAATGAAGAA CAAAGGATATGGATTGACTCATATTGGCTTAGTTTCTTTTGTTGGCAGTT GTTGACTTGTTGTGGGCCGTAGCAATTAACAGGACATTGCTAACTTTCTG GTTCCATTGTGTGTGGTCATGATTATATTTACTTCCACCAAATATGTAGG TGTCTCTGATGAAAAAGCTACGTCATCCCAATATAATACTTTTCATGGGT GCAGTTGCATCTCAGGAACGACTTTGTATTGTTACAGAATTTCTTCCACG GTACGCTTTATGTTTCCTATATGTTTTCTCTATGGTTATTACTTTCTCCT TTGCTGGTGCAAAACAAGGACTAGTTCACTTGGAAGTATATCTATACGAT CTCAGCCACTAAGAATAAAAGTAGAAGTTTTGTATTGTGCCGAGTTTTTA ACTGTCTATGACGCGGTTTAAAATCCCATTAGTTTTCTTGGGAAAGTTGC CCCAGTAGTAACTGCCTGGTTCTTGCTGGTTCCATTGTTCCCTCATTGAT GCATTTTGTTTCAAAATTCAAAGATTTACATTCTGGTAAATTTTTCTTTC TTGTTTTGTATCACACTGTACTGAGTCATGTCATGCAGAGGGAGCTTGTT TCGCTTACTTCGAAAGACTACTGGCAAGATGGATCCAAGGCGACGAGTTC ACATGGCTATAGACATTGTGAGTGCATTTTCGTTGAACCGCTAGTTCTAC GAACTGACTAACCAGTTAAATTCTATGAAACTTTTGAGGAATGAACAGAT GAGCTGGATAAAACATTATTTACTTGCAGAAGTCCAGAAACGTATTGAAA AGATAACAGATTATTTTGGGCAACTATGTAGAAGAGAAATTGATGCTTTT TGTAACCCAATACTAAGTCATATCTGTAATCTTAAGTGTACAAAGAATGG GAAAGTAAAGACAATAATGTCATGTATCTGAAATCTGACATGATATCTTG TGCTACACCATTCTTTCTGTTACTATGTCGTGCTTGAAGGTTCTTTCACT AATCTGAAATCCGGGCAAACTTTTGACTTAGGACAAACCTAGAACATCAG TTAATCTGGAACGGAGGGAGTACATAGTTCGATTTTATGGAAAACTTCAT TTTCATGCAGAGCAGATCCTAAATACATTATTAATATTTTTTCAGGCAAG GGGCATGAATTATCTTCACAATTCTAGCCCCACTGTTGTACATCGTGATC TAAAATCGTCAAACCTGTTGGTTGATAAGAACTGGACTGTGAAGGTAACC ACGGAACTTAGATTTCCTTCCTTTATGCTTTCTCTTCTGATTTACCTGGT TCAATTAGGTTGCGGACTTTGGCCTTTCACGCCTCAAACTCGAAACATTT CTGACAACAAAAACTGGAAAAGGAACAGTAAGTACAAGCAAACTTTACCT TTTGCACGTGTTCTTCAGGCTAACAAAATTGACGTAAACTTCAACGTGCT ACACGATTTCTGTTCAAAATATCTGATATCTTCGCCTTAACATGCAGCCA CAGTGGATGGCTCCAGAGGTGCTACGTAATGAACCTTCAAACGAGAAGTA AGCTCCATGGACATTCTTGAACAATAGATGTTCATGCTATCTGGAGATGA TTACTCATATCTTCCTTTTCTCTACATGCTAGGTCTGATGTGTACAGCTA TGGAGTGGTCTTGTGGGAGCTTGTTACTCAGAAGATTCCTTGGGATACTC TCAATACAATGCAGGTACAATTTTTCTCTGTATTTTTCTGTTGGTTAGCA GAGTAGTAGGTCCTTAAAAGTTGTACTTTAGAAGAGGTGTGCTTCGGTGT CCTACCCCTCCTCCCAAACTTAGGAAATTGAAACCACAAGGAGGGTCAGG ATTGACCAATACCCCTTTGGTTAGGAGGACATGAGGGGGTATCGGTCAAT CCTGGTCGAGGAGGGGGAGGACACCGGAGCAAAACTCACTTTCGAAAGTG TCCTTTTTCCATTGAAATCAAGAAAAAAGTTGTACTTTTGGAAGTGTCTC CTTCCATTGAAATCAAGAAAAAGTTTGACCCCTTGCAAAATAGTAGCTTA TAAGTATTAGAAGTGAAGCCACCACCATACTAGTGCATAGGAAGTTCTTC ACATTCTGACTGGTATGTTGCAGGTCATCGGAGCCGTGGGTTTCATGGAC CACCGACTAGAAATTCCGAGCGATGTAGATCCTCAGTGGGCATCGATGAT TGCGAGTTGTTGGGACAGGTACATACTACTTCTTCCACTACCGACAAACC GAATCCCGCTAACCGATAAATCCTTTATGTGAACAGTGACCCGCAACGCC GCCCTTCGTTCCAAGAACTCCTGGAGCGGCTCCGGGAGCTGCAAAAGCAG GCTGCCATGCAGGTGCAGATGCAGCGGAATGCGGCTGGGAAGGGTGCTGA AAAGATGAGTGTCGAAGATGGCTAGCTAGGTTCGGGGTTCCAATTTGGAT GGATTGTATAGCTGCCACTGTGAGGATGATTTATCAAGCTCGAGCCAGGG AGCTTCGAGGAAGTCCTCCGTGCTTACCCTCTGGGGATAATATGGCCGGA GTCTCCGGGGATCGCGATGCTGAAGCCTTGAAATGCAGTTTATCTTCGGA GAGGAACGCCTTGATCGGTTCGTCGCAGCTCGTGATTGATTTTTTTGTGT ATCAAAACTTGTATGCGTAAGTCCTTCCTGATGTGACTAGTTAGGGAGTT TGAACGATCTGATTCGTTTACAGCATGCAACCCAATAAATCGGAAGATCA CAGAACAAAACCCTTATTTTCAGCTGGCAATGGCGTGATTTGGGCACTAG GATGATTTAGTATTTAACCTA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.