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GrainGenes Sequence Report: AA011580

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Sequence
AA011580
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA011580
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
AGCAGGGAAAATGGATGTATATCAACATGCAATGCCTGGTTCCTTTTCTT
CTCGAAAGAACTGCAATGTCTGGTTATGGGCAGCTATTTCTCATTGCGCA
CAGCCGGCAGAAATAGTGGCCCATACAATTCGTCCAAGCCCAATAAAGCA
ATCCAGCGCAGCCCAGCCCAGAGAGCGTAACAAAACGCATCTCGTGGTCG
CCGTCAAGCACCGAAACGAGAAAGAAAATCCCCGAATCGCATCGTCTCCT
AGTCCCACGGCGGCCGGAATCCTCCCCCTTCGCCGCTAGGTTTCCGGGTC
CTCAGTCGAGTCGGCGTCGGCAGCGCGGGTGAGTGGGCGGAGCTAGAGAA
TCCGCGGCGACCGGAGACCAGGAAGGAGGAAGGTGCGCGCGCGTCTAAGG
CGACGTTGCCGTCCTTCCGCGCCGACGAGGGGAGCCGGCGGAGAGCGGAG
CGGGGCGGCTACTGTGGTAAGTGCAGCAGCTGTACCGCGACGGTATTTGT
TTTTAGTCCCATACCGTTTAGCTAGTAGGGATGCCACCAGTTTATAGCCT
TCGGTCTCTGCAGGTTCATCACCAAGTAGTTTCTTTCAGACAGTGATCTC
AACTGGATACAGTGTAAAATTTGAAATACTGTTAGCATCATCATAAATAA
ATCATACTAACACAGCTTAAGATACTTGTACTTTCTAGAAAGCCTGACGT
AACTCATTTTTTGCTTAATCCCTGTGCATATATGTTGAAATCAATTTTGA
TTGGCCTTCGGTCCTCACTGCTATTTTTAGAAGTTGGAGTAAATTATATT
TCGACCTAATTAGTGCTAACTGGTGGGCCAGCAGAACAAAGGGCATATGG
TGTATCGTCTATTTTGTGTACTGAATCTTAGATATGCCAAAAGTATAGTC
AACATTTACATAGTTGTGTTTACCTTTTGGTTATCACAGGTTTGGTACAG
ACTGGTCCTTTTGATCTGTGGTTCGAGGTTGGGAAGCGGCAGTTGCGGCA
GCGATGGATGTTACAGGCGGCGGCATCACCAGAGGGAGAGATGAGAAGAA
GGTTGCAGCAGCGTGCGATGTGGAGGCGCTGCGCAAATGCCTGGAGGAGA
ACAAGGGCGATCGCGCTAAGTGCCAGGCCCACATTGACGCCTTCCGAGCC
TCATGTTCTGTCAGCCCCACCACCTCCTCTGCCTCCAATGTCCGTCCCAC
CGTATGATCTTCCAAGTCTTCACTCCCAGTCAAAATAATTCCTCTTCTCA
ACTCTTATCCATGAATGTATTGAGTAAATTATTCGTACCCTGTCTGCTAC
TCAGGTTAATTTCCATGCCCATATATATAAAATATCATCGGGGCCTTTTA
TGATCCACTATTTAAAGCAAAAGAAACTTTGTTAAACTTAAAAGGTAAAC
ATGAAACTTGGTGTAGAGCATGGCACTTGTTGACTTAGTGCTAGGTGGTT
ATGGAATTAATCATCACCCTGAGGTCAACTAGAAAAATGAACAGCTGCTT
TCGGAAGACATCATTATAAATCAAGCAATATATACGTACAGTATAGTATA
CTTACAGATAGAGCCTGGGTGCAGAGGAAGAAATGTAATGCCAAACACTT
TCTCTGAACTGGTAGGCAGAGTTTCCAGAGCATTATAACTGAAACATGGT
GTTATTTTTCTGTCACAGGTACAAAAGCAAGCCTGAAACACCAGAGGTGC
TCTTGTGGGGATTGTTTCGCAAGAAGCTGCATGGAATGCCTATTGGTGAA
TGATATGATGACACAAATGCAACACTGGGATGCGGATGGTCAATTGAAAT
TTTGAAGTTGAGAATAATGTAAACTTAGATTTGCAGGGTGGTGCCTTTTG
TTTTCTTTTGTCGACTGCTATATATGGCATTTTTTAGCGCGGAAAGAACC
CCTGGTAAAACTGTGAATCTTGGTGTGATCTCTTGGACAAGAATGAGAAT
ATGGAGGATAGCTTTCACAATCACCATTATCTTCAGTTGAGTAATGTTTT
GCGAGCTGTTTCAGAGTTTGGAGTCTCAGGTTCAGCCTACCATGGTTATA
ACGATTTAACGAAGCTTTGCCAGTTAAACTAGCCTTCTTTTTTCTTCTTC
CACTTTGGGCACCGATTTGCTTGGGCACGGTGGTTCAGTGATTCTGCTCA
ACTCGGAGCCTATTGTGGTTTTGTTGCCCAAAGAGCTATGATCTCTGGCC
AGAAATATCTTAACTGCTTACAAAGTGTGCCTTATCATCATAGGAAACGT
AGGCATTAATTCTTCCTTTTACCAGAGGTCCAACAAAAGGTCAAATCAAT
CTCAATTGTAATTAGCAAGTAGGGGGTACCTGTGAGTGAGTGTGGTGTCT
TTGCATTGCCCTGCTACTTTGTAAACCTTTTTAGCAAGCTGTTTTAGTTT
GCTAAAAAGACGAACAGAGGGAGTATGTTGGAAGAGGGAGTATGATGCTG
AACGTTGTTTAGAACTTCAGATGCTGCATTTTGATGCCCTGTAAATCCGT
TACTTGAGTTGTATAGCCCAGGTGTGTTTGCATCTACGGATCTACCGGCT
TGTTGTTTGTGACTGTTCTCAGTGCTCCACTTTGGATGGTGGTTGGCGCA
GGAAGCTCTTTCTGGCCTGCAGATCTTTCTATGTTGCTTAGCTCTTTATC
TGCACCTAGGAACTTAGCTCTGTATATGATGTTCCAACTTTGAGAATTAT
GAATTACAGAGTACCACATCGTTGTAGGTTACATACTTGCACTGGATATA
TTATGGAGTTTATTATATGTGTGATTATTTGAGTAAATTTCACCAATCTG
TAGTGAGTGCCTTTATACGAGTTTTCACACGACACATTAATTTTACTCCA
TTGCAGTCTCGTTATTGGGCATTGTCTCGAAGAGACATAGCACACATTGC
CGAGTTCTGCTGCACATAAGCCTTGAAGCAGATGAAACTGTCAGGCAAAC
ACATGATATTGCTGTTGGTATAGTCACAGAAAAAAGATCTGGTGAACAAC
GACATAGTCAAAGCCTACTGTTAGCAACTTTGTTGTTGTCCATATATTTC
TCCTGCAAATTCTTCATCAGCACTACAAAAAAATAAAATCCCCTTCCAGT
AAAACATGCGAACCTGCACATCCTTTAGGCTTTAGCTAGCACAATGGCAA
ACAACATAGATGTGTCCAAAGCATGCATCAGCTTCTGCTTTTATTGGGTT
CACATATATCAGCTATTATGAGTACCTACTCTAAAAATTAGTTTCAAGTG
CAGTGTCAGGATCAGACATAGAAACAACTCAATCCATGCACAACTGAACT
TTTCATCGACAAACTTGTAGTAGTACAATTTTCCCAGTATGCTGCATCTG
TTGCACTGCAAGCCAACATTCAGACTATATATTTCTAGAGAATTGTAGAT
TTTGATCCTTACAGGAGCCCTGCGCTATGTAATGCCTCATACTACCCCAG
AATGCTTTTGCCGATATATGAATTTGAACCACATGCAAGGATGCATTTCA
GAGTTTGAACCATATGCTAACCTGAACAGTTGCACTCCCAACTTCAGAAT
AAGTTAAGTTGTTCATTTCACTGCTATTCAATTCAAAATATCTGGAGACC
CCATGAGAATGCCGATACGAACAAGCCAACTGCAGTTCCCTCCACATTTT
CTCATCCGGGCTTGGGACCGACAAAGGCAGTGTTAAACTACAAAACTACA
AAACACAAATTAGCAAACAATACAACCAAACACTCAGCAAAGCATACAAG
CTTACATGATCGATCAGAGGCAATATTCAGACATGCAATGGAACTTTGCA
GACAAGATCATAACACATAAAAAAGACATGGAAGCACAAAAAAACTGCTA
GTGTAAGAGTTAGATACCCAAAGTAAACAAATCAACCTACTGATTCCAGA
CAAGAGTTAAATGGATTCTAATCTTTGGTTTAAAAAATAGAATATACCAA
CAGTTAAGAGGGTGTGCTATCTTCATCGCTAGGGATAGAGAAACCGCAGT
TAATTAATATTATAGCTATCAAACGGTTATGTTTTACTCTAAAGCCGAGG
GGTATGAAGTACGCAACATAATGGCATAAAGAGCAATTTCTGAATTCTGG
TAGAAGATAACTGTAGGTATGCAGTCAGCGGGAATCATCAGACAAGCCAA
GGTTGTGTTGCTAATTAATCATTCATCAATCAAACTGGAAGTAAGAAATT
CCCAAGCTAACCAAGAGATGCAGTTCAGATTCCACTGAAGAAGCACTTTA
AAAGAACATCACTTCTGAAAAATCAATTCAATAACCAACAAACATAAAAT
CATATTAAACAAAGAAGACACTAATCGAGAAGAGGAAGTAGAGTGTTCAC
GGCAAACTATAGCCTGTTCAAGTATCCAATTCAAAACCTTTGCATCCACC
TTGTTTTAGTATATGTATATCAGTATTTCCTAACCTTTCTCCGCATAACA
ACATCACCCAGCTAAATTAAAGAGTGGTCTTTGAATTAACTAAGCAATAT
ATTTTAATATACAAGTGAAGAGAGAACATATTAGGTGGATCTTAATTCGT
CGAAGTTCAATAAAACATCACCCAACTAAATTCAAGAGTGGTCTTTGAAT
TAACTAATATATTTTAACATACAAGTGAAGAGAGAACAGATTTGGTTAAT
TTGTCGAAGTTCAATACCCGCGCATACCAAAAATTCATTAGATAACCTAT
TGAACTGACGGGGAAAATAATTAAGTGGACAAACCAATTGTGATCATGAA
AAACAACATAACAAGCACATCCGGACATGATCTCGAAATAATTCAAGTAT
ATATAACTGTACGGATCTTTTACTGCCTTCAGAGATCATGTACATCCATT
CCTATCAGGTGATAAATCTGTGACCTATACTGCTAGAGGAACAAAACAGA
GCTGAGTGCATTAATAGAACTGAAGATACAAGCAGTCAAATATTGGCATG
AAACCTGACTTCCAGAAACAAACACGGTAACAAAGTAACCAAGACTTCTA
AGTGGCATCTCGCATCTCCTGTGTCGAGTCACAAAAAACGGATGAGAACA
GATTCCATCCAAACAAAGTTGGAACACAACAGAGACCAATTAATAAGCTT
CAGGATTACTAATCAAAAGATCCAGATGTGCACGCAACTAAAGACTCCAA
GCTGTACCGAAGAGATGAGGCCACTGAATGCAAGTTGAAAGTTGAAACCG
TAAGCTGCCGCAAAATATCAAACCAAGTAACAAAATGCTCCAAGATTTTT
TGATTAGAAGTCAGATCAGTTAGGAAAGCAGACATAGTGATGGCTCAAAG
CTTCCCAAAAATAACCCCCTTAGCCAGCGTTTTGCTAGACTTCCCAACTC
TGCAGCCTTGCAATAGGCATCTCCAACACTGCAAATCACTGAGCAGACCA
AATGTATAAGCTATTACTTCAGAAGTCAAATATATGAACTCGACTGGAAA
AGTATGAAACAACTGTTGGGCCTACCATTCCATCCACAATGCGTATCAGA
TTGACATACCCAAGTGCCCTGCAATCATTTGCCCTACAAATGAACCAATG
GGCTCCAGGATGAAATCAAACTGAGAACAATCCTTAGTCAAGAAAGGAGC
TTCAAAGGAAGAACATATCCAAATCAGTTTGATCTACAGTCCCAGTTCTT
TCAGTTCTATGATCTATCTACAGTCCAGACAAGCTTCATGATACCTTCAA
ATCCTCAACTATGCAGGTAACCAAACCTCTACCCCTTCAATCCAATCTCC
ACCACCACTGTGCTAGCTAGAGGAGCATATGCACATACCACAAACAAGAT
CAACTTTATCAGTGCAAACAAATCAAGGGTTCCAGACGCACCTTGAATCA
TCAGCGAACGGGATAAAGAAATCATTGAGAGCAATTCAAATCTAGAAACC
ACTGAAGTTGACCGGGTGACCAAACCAATAAACCAAACAGACAGTCTAAT
ACACTGACCTGAATTCCCACACAGGGCATGGGTTTTAGCCACAGCAGGTC
CCACCCATCCATAACATGTATTGCAAAGGAACACTCAGCAACAGAAACAC
AGGGATGAAGCTTACAAATAACAAATTCAGCCACAACGAGATAGATTGCA
AACCAAACAACATAACAGATCCTGAGCAACTGACAGCAAAATCTGCAACC
ATAGGAAGGAGGAAGTGGAACCTCCAGTCAAAGCAAGAAGCAACTGAGAC
AAAACATAAATTTACTCAAAATAAGAGTTTATAAACGATGTGAATAGAGC
ACTGAGTTTTTTCTGTTGATGGACGCGCCATATAGATTGAAGCTCTAAAG
CATCCTCGGAATAATTGTACCTCCGCAGATCAATCTGAATGTCCAAATTT
TCCTCTCCGCAAGATACTCTGATATTTTTACAGGTTTCACAAGTTATTGT
GAATTGAGAAGGTAGTGGGTTCAGAAGAACTCCAAACAGATGTAACTCAG
CATCAGGTTGGACCTATGACATTTCTGTAACTTTCTTGTTCGGGGAGAAG
AAGCTACTTGCATCGAGGGGATAGGGTAGGTTCTTGGCTAGGAGATAGAC
ACCAGCCCACGGTTCCAAAATGAATCCCTCCATTTCAATATCCGTGAGAG
CACATAATTATGGACGAAGGGAGAGAAAACCATGACTAGGAAGTTAATTA
TCAAATATAAGGTCACGAAAGATTGTTCAAGTCACAAAAAGGAACTGCCG
ATAACATGATGAAGCAAAATAGGGCACCTTCGCCAAGTTGCGCAAGTCCA
ATATCTGGAGAACCAAACAATCCATATCAGAGTTGAAATTGGTCGACACT
GAAGTCGGAACTGTACAGAGAAAGAAATTAAATTCAGAAAGGCCGACTAG
CCAAACACAATATGTAGCTTCTCTGGCTCCATCCCATGATCAGCAATCCA
ATCCAGCACTAACTCACAAGTTCCGACCAAATGAAATAAAGCACGGAGAT
CATAACCAATACAGATAACCACGCGAAGAAAGCAAACCTCAACCCTTCCA
TTCATCTCTCCACAACCATCATCCTCCTGCACCTCAAGTAGCCCAAACAC
ATACCACAGAGCGAGAATCAGCTGTTACAACTTAGAGTCGCAAAGGTCCT
CTAATCCAGGGGACAACAGAACTACCATAAAAAAATGACCTCACAGATCC
AATGAACCCAGTGTGACCGAGCATGGAAAACTGACCTTCCCAAGTCCCAT
TTGCCGTAAGGAGCTCATGTTCCAGACAAGATCCAGTCCTGCAACCAACT
CGTGGAGGCAGACACAAAATGTACCAAACAGACCATCCACTAAACACTGA
CCTGGCTCCATGCAGAGAGTAATTGTTTTTCCCTAGCGGGTAATCTAACT
CCTAAGGCAGAAAACCAAAATCACATGGAAAGACAGAAAAAAAATCAAAC
AGAAAGATGGACAATAGATTGCAAACCAAGAGTAAACAGATTTTCAGTCA
CTAGCAGCATGGCCTTGGCGAAAATAAATCTGCAACCATAGGAGGGGCAG
ATCAACGATATGGATTGACAAGGAGCTAAATAACATAAAGACAGAAGAGT
AAGTTATAGGCTTGAGGTGAGGAGTGTAGGAGTTTAGAAAGTCTTAGTCG
GTGTAGGATGTGCCATTCGTTTTAAGCTCCAGAATATCCTTAAAATCTTC
CAGATCAATCTGAATTTAGATTATTTCCTCATATAAGATAGGTTATCTAT
GTTATGAACTGACAAGATAGTAGATTAAAAAGCTCTGTGAGCAGATTGAA
ACTCAGTAACAGATTGATTTGAATTCGTAATCTAGGACCTGCATCAAGCA
AGAGAAATTTCCATAAACTTTTTCATTAAAAAGAGCTAAAGCATGCATCA
AATGATGATGATGAGTGGGTCAAGGATAAGCCTGTCTCGGCTGGTAAGGT
TCAGTAGAGAACAACAACGGCTCCAAAATGCAATTTTATTACTTCAAGTC
AGTATCTGCAAGAACTGTGCATTTATTAAGGCAGAGAAAACTAGTGTCTG
TAATTGTAATTGTAAAAGAAGTAAGAGAGTTAAAGTTTAGTCATAACAAG
GAACCGTCATGCCAGGGTAAACAAGGCCGCCCTCCAATAGCAATTTCTGG
AAAATCACCAATAACTCCAAATCAGAACTGCAGACTGTGGGAGACGATGG
AAAAATTAATCTAAGGAGGTTTGATTATCCAAACAGAGATTGTAAGGAAG
GTAAGTCTGTGAAGTGGAGTCCCGCAGCCCCGCTAAGCAGTATAATTCCA
AATCCTGGGAACCACCAACAAAACGGAATCAGATTTCCTGGAGACTAAGT
GCACTGAATTGTTACTAAAAATCAATGGAGTGGGGTTGATTATCCAAAAG
CCTGAGGGGTAGGGGTAAAGCCTGGCTCAGCTTAGACTGAGAGAAATCAG
GTACACCGGTTTCAAACTGTAAATTATAGTTCGTCCAAATGGATATCTGC
AAAAACACAGAATTACCAACGAGAATACTTCTGTCTAGAAAGTTGAATTG
TTGAGGAATTTGAAAAGATGGTAGAAGTCACAAAAATGAAAAACCAAAAA
CCCCAGAAATCCCGCCTAGCCGCACATAATATTCTGGAGAACAACCAATG
GTTCAACTCAGACTTATTGTACACTAAAACTGAACTACACAGACAAAAAG
ATTAAATTGAGGAGGGTTGATTATCCAAACACAGATCTGGAGTTCTTCTG
ATACAAATGATCACAGATCTTATCCAGCTTCAACAACAGAACTTCAGCTC
TGACCATACCACAATAACCATTGAACCATAGCAAAACACAATTATCATTG
AACCAAGATAACAGACAAAATTAACCATTGAACAACAGGCAAATATCAAA
CCTCCATCCTCCAATTCATCTATCAACAACCATTGGCCATCCTGTGCAAC
TCAAGGAACACAAACAAATACCAGAAGCAAGATCAGCTGTTACAATAATA
TATACTCAATGCAGGGCCTCAAATAAACCTCAGATCAAAGGACATGGCCA
GCCATCAGAAGAGAACGCCAAGGAACACTACTCCAGAGCATTGCACAGGT
GATGTATATTCATATCTGTGATCACTGAAAGCACGTAACACAACCAACAA
ACTGATCTGACGGAGCACAGGAAACTAACCTCCGCAGGTTCGATGACTAA
TCTCTAGTTCCACAACAAAATACACTCCTGCAACCAATGGACATTCGAGG
CGAAAACAAATGAACCGAACAGTGTGCCCACGGAACACTAACCTGACTTC
AGTTAAAACCCAGTTAGGTCCAACTCCCTACAATACCTGCAGACTACAAA
TCACATGGGTCGGGAGGACATAACGAACCAAATTATAAAGTAAAGAGATA
CATAACAAACCAAACGATTTAATAGATTTCAGGCCACTACCAAGCTAGCA
GCATGTCCAGGGTAAAAAGGATCTGCAACATGACGGGCATAAACGATAGT
GAACCTTAAGCAAAGCTATGAACAGAGGCAACTAACCAAAATAAACAAAC
AGATGGACTCTAAATACGAGAAAAAGAAAGTGAAATAGAGAGCACAGTGT
TTTCTTGGTTGTAGGATGGCGTTAGTTTGAAGCTCCAGAATCAGAGTGCA
GATCAATCTGAATGTTCAAATATTGTTTTCATAAGATAATTTTATATACA
TGTGAGTTGTGACGAATTGAAAAGGTAAGTAGATTTAGAAGTGTCTTCAA
ACAGATTGCGTTCAGCATCAGGTTGTACATGAATTCGGCAACTAGAACCT
GCAACGAGCAAGAGACGTTTCTATGAAATTTTTGTTAAGGGGGCTTAGAA
GAAAATTTAGAAAAGCATAAGCATGCGACAAGAGTGTGGACAGTTATAGG
CAGGGGATCAGGCAGATGACGGCAGCGGTTCGAGATTGTTAATTGTCTTC
CGTGGCAATATCTGCAAGAGCTAAGGTTACTGACAAAGGGAGAGAACTAA
TGTATTATGGATGAATTAAGTCTGAAAAGTCAAGTGCAATAAGGAACCGC
CACAGCATGCTGATTGCTGAACCAAATAGATCTCCGGTCACCCGCTAAGA
AGTATGATTCCAATTTCTGGAGAACCAGCAAAAATCTGAATCAGAATTGC
CGGGAAACAGAATCAAACTACAGGAGAAGTCGAGTCTGAGAGGGGGCTGA
TTATCGAAAGGTAGAACGGAAGTTTCCCAATCCTAGGATCACCGGTCCAA
TCCATGTAACTTTGATCTCTGGACAACCAGAAGAGTCCCAAATCAGAATC
GACAGATATTTCAAACTATGGAGTAAGAAGTTGAGTCTGAGAGGGGGCTG
ATTATCCAAAACACAGAACGGATGTTCCCCAATCCTATGATCCCCGGTCC
AATTCGTATAATTTCAGTATCTGTGGAGAACCACCAACAGTCCCAAGTCA
GAATTGACGGACAACTAGTGCAAATGAAGAAATTAATTCGAGGAGGGAAG
AATATCCAAACACAGATCACGATCAGGAGTTGTCCGATCCTATCACCAAT
CCGATGCAACACTAAAGCTTCACCTCGGGAGATCTGACCATATACCCACA
ATATATAGTTGAACAATAACCAATCGACCATGGAGATAACAGAGCAAACC
TCCAATCCTAGATTCATCCCTTCAGAACGATCAATCCCAGGCTGCTGCAT
CTAAGGAGCATAGGAACATCCCAGAAAAATTAAGAAATCGACCGGGGCGT
TGACCGAATCCACCTCGGGTGAACGGATGGCGGAGGTGAGCCGTCACGGG
ACATCGATCCAGAATCCATTTGGATTGAAATCTGAAATCACTGATTACAG
GGTGACGGAACCAATGAACCACCGAGCACGAGAAACTGACCTGCGTCGAT
CGCCATGCTTGCAGGCCTCGCCACGCGGAGCTCCAATTTCAAAAAACTAC
ATCCAGTCCTGCACAACCGACGAGGGAACACCGGCGGTCCGAACCGGAAC
TAGAGACATATGCAGGAATCAACCATGGAAGACAGAGATCGCGGAACCAG
AACTCGGTTGATCCAGAGATACCGATCGAATCCGATCCTTCTCCATGATC
GAATCCGATCCTTGGCCGAGTCGCAACGACGGAGGCGGACGAGACGGGAC
GAGGAACCTGCGAGAACAGGACGGGAGAGCCGACGAGGAGCAGAAAAATT
AATCGAGACCAACGCGAATCGATCGAAAACGAATCGAGGGGACAGGAAGA
GGAATCGAGGAAGAGTTCCGCAGACGCGAGGAAGGCGAGAACGAGGCGCT
GGCCACGGAGACGACGAGAGAGGGCCGGACCAGAGCGCGGGGAAGAGGGG
TGCGCACCTGGGCGCTTT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.