Query (optional)   in Class  

GrainGenes Sequence Report: AA001916

[Submit comment/correction]

Sequence
AA001916
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA001916
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CCGGGCCTGCCGTGCTGTCGTACTCGAGCCGAGGAGCGGAGGGCCTCTCG
AAAAAGTGCCGGCGGAGCAGCGACTACTATGAATATACGCCCTCCCTAAA
TGGCGAATTAGCAAAATTAATCAGGAGTTTTTTAATTAATCTCTCTTTCT
CTCTCTCACCGCTCCCCCTTCCCCCCCCTCTCTCTCTCTCTCTCTCTCTC
TCCTCTAGTCGCCTCCCACCTCGTCCCCTGCCTGTTGTGTCCTCCCTTGT
CGCTCCGCCCTCCAATCCCCCCACACGCTGCAGGCAGGCAGGCAGGCAGG
CAGGCCAAGCGAGGCCAGCCCAGCTCCCGCCCGCATCGCCCCCGCCCACA
ATCCCGACGAGGGATCGGAGGACGGCCGCCCGCCAGCCCGGACTCGCCGC
CTCGCTGCTCCCTCCCAGGTGGGCCACGCCTCGACGCATCCTCCTCCTCC
TCCTTCCCTTCCCCCCCAGCTCCAGCGGGGACTTCTCTCCGGTTCTGGGT
GCCGTGCTTCCGACATCCCACCCTCCCTTTCAACGAGTTTCGGATTTCCC
TCGATGTTTTCTACCAGGCGTTTTCCATCTATTTGTTCGTGCCTCTCTGC
CGGTGTTCGTCCCCTGTCGGTGAATTCGGCGGGCGGTCATGCCCGACGGG
GAATGCGGTTCGCCGGATTCCCTGGATTTTTTTTTTGGAAGAATTTCCTC
GTCTGTTCTTAATAGATTTATTACTTTATCGTCGTTTGCTCGCGAGATCA
CGGCCTGATCCCTCACCCACCCCCCACCAATTCGCAGGTCGAAATTCGCG
CCGACGGCGCAGGAATTCCCCTCCGGTACGCCCCGAGATTTGATTCGAGA
AACTCCAATGCGGGCCTCCTCCTCGTAGCCGGACATCGGACTCCGCCGCG
TCCAGAGGCAAGCCTGCCGAGATGGCCCGTGTGCGGAAGCGCGACCGCCT
GCGATGGAGCCATCTCTACACCTTCTCCTGCTTCCGCCAGCCGCACACCG
AGGAGGGCACCGACCCCGCCGCCGCCAGCGGCAGCCCTGTCGGCGGGCCC
GGCTTCTCGAGGGTCGTCCACTGCAACAACTCCATCCTCCACCGCCGGGC
GCCGCTCAAGTACCCCACCAACTACATCTCCACAACCAAGTACAACGTCC
TCACCTTCCTCCCCAAGGCCATCTTCGAACAGTTCCGCCGCGTCGCCAAC
CTCTACTTCCTCCTCACCGCCATCCTCTCGCTCACCCCGGTCTGCCCCTT
CTCCGCGGTCAGCATGATCGCTCCCCTCGCCTTCGTCGTCGGCCTCAGTA
TGATCAAGGAGGCGATGGAGGACTGGCGAAGGTTCATGCAGGACATGAAG
GTGAACAACCGCAAGGTCAGCGTGCACAAGGGCGAGGGTGAGTTCGAGTA
CCGACACTGGGAGGACCTCTGTGTTGGTGATATAGTCAAGGTCGAGAAGG
ACCAGTTCTTCCCTGCTGATCTCTTGCTCCTGTCCTCGAGCTACGAGGAT
GGCATCTGCTACGTTGAGACCATGAATCTGGATGGTGAGACCAACCTGAA
GCTCAAGAGGTCGCTGGAGGTTACTCTGCCCTTGGAAGAGGATGATACTT
TCAAGGATTTCCGGGGAGTGATAAGGTGTGAGGACCCAAACCCGAGCTTG
TACACGTTCATTGGTAACTTGGAATATGAGAGGCAGATGTACTCTATCGA
TCCGTTCCAGATACTTCTCAGGGACTCAAAGCTCAGGAACACAGCCTTTA
TCTATGGAGTAGTCGTTTTTACTGGCCACGACAGTAAGGTGATGCAGAAT
TCAACCGAGTCACCATCAAAGAGGAGCAGGATCGAGAAGAAGATGGATCT
GGTCATATACATTCTGTTCACTGTCCTGGTTTTGATATCGCTCATCAGTT
CCATCGGTTTTGCCGTGAGGATCAAGCTTGATTTGCCCAGATGGTGGTAC
TTGCAGCCTGAGAAGTCCAACAAATTGGACGATCCAACACGCCCTGCTCT
TTCTGGGATATTCCATCTCATTACAGCACTCATTCTCTATGGGTATTTGA
TTCCGATCTCGCTATATGTCTCAATTGAAGTTGTCAAGGTAGCACAAGCA
CATTTCATTAACCAGGACCTTCATATGTTTGATGAGGAAACTGGCAATAC
TGCTCAGGCCCGTACGTCCAACTTGAATGAGGAGCTTGGCCAAGTTCATA
CGATTTTGTCTGATAAAACTGGCACCTTGACCTGTAATCAGATGGATTTC
TTGAAGTGTTCAATTGCAGGGGTGTCATACGGTGTGAAATCGAGTGAAGT
TGAAAGGGCTGCTGCGAAGCAGATGGCATCAGGTGCTTCTGACCAAGATA
TTCCTTTAGAAGATGTATGGGAGAATACTGAGGATGAAATCCAGTTAGTG
GAAGGAGTTACCTTCAGTGTGGATAAGTCCAAAAAGTCCTCAATAAAAGG
CTTCAGTTTTGAGGATGACCGTCTTATGCAGGGGAACTGGACCAAGGAAC
CAAATTCTTCCGTTCTTCTTCTGTTCTTCCGGATACTTGCTCTTTGTCAC
ACTGCAATCCCCGAGGTGAATGAGGCGACGGGTGCTCTTACTTATGAAGC
AGAATCACCTGACGAGGGGGCTTTTCTTGTGGCAGCCAGAGAATTTGGAT
TTGAATTTTTCAAGAGAACACAATCGAGTGTATTCCTCAAAGAGAAACAC
ACTGCTTCTAATGGCATAACTGAAAGGTTGTATTTATATTTCATATTACA
CTTGCTCTTAGCTTTTGTATCTTTGACTCAAGAGTCCTTAGCTTTTCTGG
TCGCTGTTTATTCATTTATTTTCATCTTTGATTGGCATTACCTAGGGAGT
TCAAGATTCTCAATCTATTGGAATTCAACAGCAAAAGAAAGCGAATGACG
GTAATTCTGAAGGATGAAGATGACCGCATTTTTCTTCTTTGCAAAGGAGC
AGATACGTAAGATTTTATGCTAAATAATTTTCTTTTCTGATGCTTATTTT
GTCAGTTGTTGTATGAACATGTACCGTCATCTGTGTCAGATATTTGACGC
TGCTACTTTGATAACCTTAAACTAAAAAGATGACAAATTAAAAAGTGCAC
TCAAAAGAGTAGTGTTGTACACTTGATTTCTGATTTGTACTGTCCACATG
GGTTGTTTATACTTTAGCTGACTATGTTCTGTTGCCTTTTTTTTCCCAAC
CGAGCAGCATTATATTCGATAGATTAGCAAAAAATGGAAGGTTGTACGAG
CCAGATACAACCAAGCATCTCAATGAGTATGGTGAGGCAGGCTTGCGGAC
ATTAGCGCTGTCATACAGAATGCTCGAGGAATCAGAATATGCTTCTTGGA
ATGCAGAGTTTCTTAAAGCGAAGACAACTATCGGGCCTGATAGGGAATTG
CAACTCGAGCGGGTCGCAGATTTGATTGAAAGGGAACTGATCCTTGTTGG
CGCAACAGCTGTAGAGGACAAACTACAAACAGGGGTAAGAATAACTAGTT
GATTATCTACTTGTGAACTTATGTTGCTGGTCCTGCTATCATGCTAGTAG
CTTTTTTGACTCGCTGTGTTATTTTTCATGTCCTACCAGGTTCCTCAATG
CATTGATCGCTTGGCACAAGCAGGTCTCAAAATCTGGGTTCTAACGGGCG
ATAAGATGGAAACTGCAATTAACATAGGGTAAGCTATTTAAGAGTTGTTC
TTATCAATATATTTCTATAATCCTAAGTACTGCATTGAACTTGAGCTCTT
TCTGGTTCTTGTTAAGAGTGACAGTGTGTTTCGTCTGAACATTATGTCCA
TTTCTTCTTTTCAGATTTGCATGCAGTTTACTTAGGCAAGGCATGAAGCA
GATAACCTTATCTACAACTGCTGGTGACCAGGTAGCCCAGGATGTACAAA
AGGTACCTTTGCACAACATTTTCTCTGGAACTATAAATGGGTTTGCTCTA
TACGGTAGTTCACTTTGCTTTGTTTTCATCTTTGGAACCTGAGCAGGCTG
CAAAGGAGAGTCTCATGTCGCAAATTGCCAATGGTTCACAAATGGTCAAG
TTAGAGAAGGATCCTGATGCAGCATTTGCTCTAGTTATTGATGGAAAAGC
TCTTACATTTGCTTTGGAAGATGACATGAAGCATATGTTCCTGAATCTGG
CAACAGAGTGTGCTTCTGTCATATGTTGTCGTGTGTCTCCAAGGCAAAAA
GCATTGGTAACTTCATCTATTGCCAATCCACACTCTGTGTGTTTAACATA
ACTCAGTGCTGAATTTGCTTATCTTTGCTTTGCAGGTGACCCGACTGGTC
AAGGAAGGTCTTGGAAAAACCACTTTAGCAGTAGGTGATGGTGCAAATGA
TGTGGGTATGATTCAAGAAGCTGATATTGGTGTTGGTATAAGTGGGGTTG
AGGGCATGCAGGTCTGTGTAGATTATTACATGATTCACTCAGGAATCTAG
TCCATTGCTAGAAGATGCATTGATAGTTCGATTATAACTGATAATGACGT
GTTTTCTTTGGCCAGGCTGTGATGGCAAGTGACTTCTCTATTTCCCAATT
TCGGTTCCTTGAGCGACTCCTTGTTGTACATGGACATTGGTGCTACAAGA
GAATTGCCCAAATGGTGCGACTCAAAGCACTTTATTTGTTTGTTACATTC
CGTTGAACAATGTTGTTTCAAATGTATGGAATAATGTTTTCTGAGTACTA
TTCTGTTGACTTGCAGATCTGCTACTTCTTTTACAAGAATATTACCTTTG
GACTTACAATATTTTACTTTGAGGCATTTGCTGGATTTTCTGGGCAATCG
GTTTATGATGATTGGTTTATGCTGCTTTTCAACGTCGTTCTTACCTCTCT
ACCTGTTATATCACTTGGAGTATTTGAGCAAGATGTTTCTGCTGAGATCT
GCTTACAGGTATGTCATAGAAATTTTAACTTATTTACCCATATGCTTCCA
AATTAATATTGTACCCAAGTATTCATTTAGTCCCATCTGGGAGTTAATAG
TATGACACCCAGTCTAGTACCAGAATAACAAGGTTGCTGTGTCTGCTTAG
AGCTGCGAAGGTAGTAGGGATGAATCACAGGAGGACGAGTTCGTCCTCTG
TGTCTTGGAGCCGTAGCCGGCGATTAGACGGGACAGCAAGGGGTTAGGTC
GAGAGAACTCAGAGGGGTAGGGAATAGCACGTAGAAGATACAGTACATTG
ATTGTTATTGCTTGCCCTAAACACACGGGATACAGATCCTCTTATAGGAG
GATCAGGCGCCAGGGGACCTGGTGCCCAAACCGACTCCAACACCTGTAGT
ATACAACTAGGACTCTATTTAAAGTAACTCACGTGACCCTATTCTCCCTA
ATTATTTAATCCTGCAGTAACTGAACTGGACTCTAACTATGGCAAGTAAC
TGAACTGGACTCTAATTATGGCAAGTGTTATGCTACTTATACCACAACAA
AGGTTATGCTCATTGTGATGCATGTTTAAGAAAATATAAACAAATTGTGA
GAACTCGAAATTTACTACTACCTCAGTCCAGAAATAAGTGACTTGGATTT
GTCTAGATTAACATGTATCTAGATGCATTTTAGTGTGTATCACTGTATCT
AGACAAATCCAAGTCACTTATTTCTGGACGGAGGGAATATCATATTTTTT
CATGTTATACCTGCTTGTAATGTTTGTGTTACACACATAAAACTTCATCC
TCCAATATGCCTAGTCATTTAAGTAACTAGATGATTCTCTGCACGCTGCG
GCAGGGCATTTTCAGATCATCTTTGGCATAAATGTGCACATGAAAGGGAA
AGGTAATTCAAGGAATGAAATGGTTCTTCCCAGAGGTTGCTGCAAAAACA
ACTAATTAATTTTGTTAAGGTAGAATAACAAAATTTAGAACATACTGCAT
AACAAATGAGCACACAAAACCGCCATCAATGGAGATGAGATAGCAACCAA
TAGAAGTCATACTCCATAGTAAATTACCAAAAATGGAAGTTCTCTCACCA
AATACTTACCTATCTCTCGGGAAATGATAGTTTGGTCTATTGCATTAAAA
AATTGCTTGACATTATCCAACACAAAGAAATACTCCCTCTGACCCATATT
AGTTTGACTCAAGTTTGTCTAGATTCATATGTATCTAGTTAAGTATATAG
TCTAGATGCATCCGTATCTAGATAAAGTTGAGTCAACTAATATGGGTTGG
AGGGAGGTAATAGATCGACTCACCTCTTCATATTCCCAAAATCCAATAAT
TTGGTTTAGCAATACCCACCACAGTATTAAGTCCAGTCCTGTCCACATTC
AGTGAAAATAGGAAATTAAGGGGACAAAGAGATTGCCAAATCTGTTATAC
AGCAAGATTGATTGGGGTTGGATGGAGCAGTATTATGAAGAATAGGGACA
TGACTACATGACAGAACTCAGAAGGGACTGCCATTGACAGTAGCGTATAT
AGGCAGTGAAAATGAAAGAAGTGAGTGGAAGGCTGCCCCTCCTAGTATGT
CTGTGACAGTCATGTGAGATGCTCAAGAGTCACTGAAGGAAAACTGGTGG
CCTAGAAATAACTTGTGCATGGACGCATCTGGCAACAAAACATTAAGTGA
GTAAAGTAATGCTAAGTGGGATGACGTGGAGACATGCATGACTTGTTGAT
GTGGCATGGCTGCATGTGTAGGAAAAAATATGTTGCAACTATTCAGGAAT
ATAAGATTCAAGCGTGTGAATGTTGTAATTAGAAATATAGTTCGGTTTAA
TGTGCATTGGATTCCATATTCTTTATTCAGTAGAATGATTCCTCAGCTAG
AATATCTAGTTCAAATATTCATTCAAAGGCACACTAATGGAAGGCACATG
TCACTCTATGTTCTTCCAAGTAAATGTGTATTTGTGTTTGCTACTGTCTA
ATACTTAGTGATACTGAATAGTTTTGCATCAGGTCCTTTGCAGTTTGCAC
CAGAGGACTTCAGTTAATTTTATCTGGCTATCTGCTGAAGCTACTATACC
CTCTTACATTAACACTAACATGTCATACTTTGCACTTCGCAGTTCCCAGC
ATTATATCAGCAAGGACCAAACAACCTTTTCTTTGACTGGTATCGGATTT
TAGGATGGATGGGAAATGGCCTCTACTCATCTCTGGCAATATTCTTTCTC
AACATCTGCATATTCTATGATCAAGCAATCCGTTCTGGGGGACAGACTGG
CGACATGGCTTCAGTGGGAACCACCATGTTCTCCTGCATCATCTGGGCTG
TAAACATGCAGATTGCTCTGACAATGAGCCATTTCACCTGGATTCAACAT
GTGTTTGTGTGGGGCAGCATAGGGACCTGGTATGTCTTCATTGTTTCATA
CGGGATGGCTTTGAAGTCCGGCGACAACTACAAGATTATGACAGAAATTC
TTGGGCCAGCTCCCTTGTACTGGGCAGCGACGCTTCTGGTGACCTCTGCT
TGCAACATCCCCTACCTGATTCACATATCCTACCAGAGATCGTGCAATCC
ACTTGATCACCATGTGATTCAGGAGATCAAGTACCTACGGAAAGATGTCG
AAGACCAAACAATGTGGAAGAGGGAGCGGTCTAAGGCCCGGCAGAGGACC
AAGATTGGTTTCACGGCAAGGGTGGATGCAAAGATTAAGCAGATCAAGGG
GAGATTACATAAGAAAAGCCCATCGTTAACCATCCATACTGTAGCATAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.