Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA011310

[Submit comment/correction]

Sequence	AA011310
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA011310
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CACGCGTCTAACCATCATAAAAAAAAAACTACTGCCTTCTTCCGCTACTA CCTCTGGCCGAAGTTCTGCAGCCGCTCTAGCTAGGTTTCTTGGAGGTTTT GGTGCTTCTTCGGGTTCGACGAGCTAGCTAGCACCGGTGGCCGGCCATGC ATAACAACAGGGTGGCGGCAGACGACGGGGACGGTGGCGGTGGGGAGGCC GTCGGAGGCGTGCACGATAGGGTCGGGCTGCTCGGGAACGTGCTCAGCGT GGTGGACCCAGCGGACTCGGACGCGACGCCGGAGAAGCGGCCGTCCTCCT CGTACGGCCATGGCGTCCTCCGGATCTCCTCGACGCCGGTCAAGCAGGCG CCGTCGCATCAGGTCCGACGGCTCACGGCCTTCCGCCGCCCCAGCCGCAT CGATAGGTCCAATTCCGCCGCCACGCATGCGCTCAGAAAGCTCAAGTTCA TCGCCCGGACTGCTGACGGACCCAAAGGGAGGGCCGCCGCCGAGAGCTGC TTCGAAAAAGAGGCCAGGGATGGCCTCCTCCACCGCTCCAAGTTTGCCAA GTGCATCGGTAAACCACCTTTCATCAGCTCGCTTGGTCTTGTCTCAACAA AAAAAAAAGCAATCCGCACCATAGCTAAGCAAACAATTTTGCAGGGATGA AGGAGGTCGCGTTCGCCGGCGAGCTCTTTGACGCGCTCGCAAGGCGGCGG AATATTTTCGGAGACAGCATCAACAAGGAGCAGCTGTTGGATTTCTGGGA CCAAATTACCGGTACCAGCTTCGACAACCGCCTGCAGACATTCTTCGATA TGTAAGCTAATTAAATCCCCAGCTACCGATCAATGAATCTCTTGGTTAGC ATTTTTAACTGGAATTATATTGAGCTTACTCGCAAGTTGCTCTCTTGTTT TCTCCTAATCCAGGCGGATGTGACTCCCTGCTGCAAAATATGACACAGAT TTGTGTAGATTCGTATGTATTTAGACCAAGGTTTTGGTTCCCGGTATGAA AAAAAATCCCCAGGGGGGTCGGGATTTCCGGTTACCGCGGTTACCGAGAA ATCCCGACCGGTTACCGAACGAATTTAAATTTCAAAATTCGAATTTACAG TCCTCGGTATGACTATTTACATCGTTTTTTTGTTAAAATTTAAAAATTTC ATACAATTCAAATAAATTCGGGATTTTTTGTCCGGTAAACCAATTTCCCG AAGGTGGCCGGGATATCCGGTTACGGACCGGTAACCGGATTTCCCGACCG ATAACCAAAACCATGATTTAGACACGTTTTAGCATATCGATATATGTAAA TTTGGACAAATAAATCTGTGATATTCGGAACGGAGGGATTAGTAATTTGT TTCACCTATACTTGTTGTACGCAAAAAGTATCATGCTAAGTGCATAGAGG AAAATACATGGAATTGCAAAGTGCCCACAAGAAAGATACAACAGGATGGC ATCACACATTTAAATTCATTTCGGTGATTAAAAACGTGTTGCAGCTTAAG CTGGCTGGCGAATTTGCAATCCATCTTGACCACATGTATATGTTTTGGCA AAAATAAAAATCACTCTATTTTTAATAGAACAATAACATATAAAATTATC ATGCTTTGATAACAACTTATCACACCAAAAGATCTTAGAAACATACCAAC ATATGTATAGTTTGACGATCTCGTTGAGACCAAATGTAAATTGAGTCCAC TGTTTGAACATTATAATATTTATAATTTTGGATTTGGAAAAGTATTGATG ATGTCATCTTCTTGGTTTTTAGAGCATGCACACATCTCTTTTTATCGTAG ACAGCAATATGGAGCTAACTTGTGCCCTATTGGTGTCCTATATTAGTAAC CACCTTTTGACAATATATGTTAATGTTTGGTTTTTGATTGCTTATCACTT ATGCCGCACTGTTATTGAAAAAAGCCTCTTAAAATAGCTAGAAGTGACGA ATCACGCTATTAACTGACTAACAGGGTGGACAAGAACGCCGACGGGAGAA TCAGCGAGGATGAGATTGAAGCGGTAAGTTCCCACTACTACTTCATCGGT TTATTCATATGGGCGTCTTTCCTAGAACAACCTCAAGCATCCCTCGTTGA TTCAAGGTGGTGTTGTCTTTTGTTGCGCATGTGTGACTTTTGTCTACCGG AATTAGAGTTAGCTAGGAGAGAGAATTAATGAAACAACGTCCTATTTTAG TATCTAGACACTGCCTCTCGTGATCCAACAATACAATATCTCGTAATCAT CATCCAGTCAGCATCACAGAGTGGTGTCAATTATATAAGATATTTGGTCT ATATAAATATAATACATTGAGATATTTTTTCTATGAACCTACTATCTCCT AGTAGAGCATGCTAAGAGAAATGCATTGCCTAATTGCCCCGTTGTAGTAC ATTTGCACTACGGTTTTGCAATACTCAGTCGTCTGAACATTAAGTGAGAG CTTAGTCAAGTCCGCAACCGTTGGATATGCATTGTGATTCGTACTAGATG GTGAGTTATCTCTGGGTTGCAACTGAAAATTTTCTAGTTGCAAGTGGGTC ATAACTGAGAAAAATGGTCCACGCAAAGCAAAATGATTTTCATGCATACA AAAATAGTTCTATATTCACATATAAAAATTGTGTGATAACATCACTTGAT CGAGAATTAAGCTAATTATCGGTTGAATTTTGAATTAGATGGACCCATTG CAACAACAAATCAGTTTTATGAATGCTTTATCCTAATTAATCATTTCATT GTTAAGATATTACATTTTAAAATATAGATCTTTTAGGGGTTAGTAATTCT TGGGTGGTCTGCAGATCATCACGCTGAGCGCATCATCTAACAAACTAACG GTGTCCAAGGAGCGGTGCCATGAGTATGCACGGCTCATAATGGAGGAGAT GGACCCCTACAACATTGGCTACATCGAGGTATTTTTTCTAAAACACGACA AATGACAAGAAAATAAAGTTTTATTAAACAACCTACTCTCATGCACTATT TCTCCCAAATGCTTAGCACCCACGAGCACTCACAATCGGGCCTGATTCTG AATCTTATATAACACCACAAAAGGTGGCGCTAGCTTGGTATAAAAAAATT CGTCCATTGCACTCGTTCCAAATCTTCAAGTGGAGAGCAACCCAAGAGAG GCAAGGGCCTTGTGATTAGAAGATCACCCGTCCGAGATCTTAAGACACCT AATTTTAATATACAAATTTTGCTATTGTTGTATGTCAAGAGAATGAAGAC CCGTTCAATCTTTTATAAAACCCCAATGTCTAATGGTGAAGCGGCATTTG ACGTGTTTGACCGATTTCATAGTTTGCTTCTAGAGGGGGCACAACCCATA ATTTAGCCATCCTCTCTTCTCTAAATGTTCTGTCATCCAAAGCTTATTTT GGGTTGCAAACCTAGCAAAAAAATCTTCTGAAGGGTCCAAACCTTCCAAA TGTTCATATTCATTTTTTTTTGGAAATGGAAACGTTCATATTCATGTCTG AGGCAATATAACCCAAAAATTGCACTTCATATGGTGATTTCGTCGAATTA ATTTGTCCACTTTCCTTAGGCTGCCAAAGAATGCCATCCTCTTCATTTAA TTGTCTTGAAGTTACACTTGACTTAGCCGCGTCTAAAGCTCCACAAATTG AGCAACATGGTCTAAATTGAAATTATCATTCATCGCCACCTTTCCAAATC TAGCAAAAATTATACTCCCTTGTCAATAATTACCCTGCATTCTAGGTTTA GTGAAAGTCACACTTTATAAAGTTTGGTAGAACATATAGAAAAAATTATA AACATCTATAGCATCGATTGTATATATTATAAAAATATAACTTATGGCGA TTCTAATGGTACTAATGTTGTATTATAGATGTACATAATTTTTTTAATAT GTTTGGTCAAACTTTATAATTGACCTTGACTAAACCCAGAATGCAGCGTA TTTTCGGATAGAGAGAGTATCTAAAGAAGGGGTACAAACCTTCTAAACCA TTATATTCATGTCTGAGGCAATAGAACCCCAGTACTGCACTTTATATGAT GAATTGGTGATATCGTTGAATATTGGCCACTTGCACTTGACTTAGTCTTG AAGTTGCACTTAACTTTAGTCGCGCCCAAAGCTCCACAAATTGAGCAACA TGGTCCAAAGTGCAATTTGCATTCATCGCCACGTTTCCAATCGAAGGGTT ATCATGCATGGCTGGATTGACACACCCATTTCTTTTTTTTCTTAGGGCGT GTTTAGGTAGACCAGGTGAACCCAGATATTCTCTTCTCAACCTAGCTAAG ATACCTTTTTGTTATTTGTTAGGTCGGTTTGGGCCATCTCAGCACTGCCC ATCTCACCCCAAAATGGCTCTCAGCCGGGCTGAGGAGAGAAAGTAAAATC GAGCTTCGCAACTCGCCCAGGCCGAGTCCATCCCGTAATCCACTATAGCG TTGTGGGCCCCCTACCCGACCCTTGAGCCCGTCTCCCTTTCTCTGCTCAT TTCCCTCGAGCTCCGAGCATTGCAGACCGCCTCTGACGTCGCCGAACCGC TCCCGGCCAAGACCACCTTGGCGCCGTGAACAAAGGCAGCAGAGGCACGT CGCACTGCCGTGCCGCCCGCAGAGACAGCAACAGCCGGTCGTGCCGCCCG CAGAGGCAACTGTAGCAGGCGCACCGCCGTGAGCAGCGGTAGGTCGCGCC GCCGCCCACCGCCTCGTCCTTGCGCGTCCCCTGTGTTGTGAGTCGGCCAC GCCGCCGTGAGCTGCAGAAGGTCGCGCCACCGCCGACCGTCGCGACCTCG CGTGTCCCATGCGCTACGCCCTTGAGTCGCTTCGCCCAGCAAACTCGCAC CGCCTCCTCGCCCAGCCTCGTATCACCGGCGCCGAGCAACCTCGAGCTCG TCTCCACCGAAGCTCCCTGGCCGCAGCTCGCCGGCGCAGGGCCCCGATTG ATTTTTTATGTGTATAGGGAGCCGATTGATTTTTATTTGTATACGGGACT TGATTGTTTTTTATTTTTGTATATAGAGACCTGATTGCTTTTTATTTGTA TATTTAGGAGCTTTTATGTAAATTTTAGATCTCCTCGGTATATCTCAAGT TCTCAATACATACAACCCACCAAGCAACGGATGAATTCAGAATTTCTCAA CAGACACGTGCTACCAAACACATGTCAAAATCTGAACTCAAACATGTTAA TGTCAGCTTAGCTCAATAGAGATATTTATTCTGACGTAGTCCGGACTACC AAACACACTCTTAGAAAACGTATGATATGATTAGTTTTCCAATAATGTCG CATGCATAACGTGTTGCTGATGGTGATGTATCCAACTAATTTGCAGCTGA ACAACCTGGAGAGGCTACTGCTGCAGACACCGAGCGAGTCGATGCGGATC CGGACAAACAAGGGTGGTGAACTAGGCGAGGCCCAGATCCCCGGGCCGAC AGAGGAGCCCAACCTGTTCCATAGGTGTCGCCGCCGTGCCCGCTACTTCG TGTCGGACAAGTGGCGCCGCTGCTGGGTGATGCTGTTGTGGCTCGGTGTC TGCGCGGGCCTCTTCGGCTGGAAGTTCGCGCAGTACCGCCGGCGCGCCGT GTTCGAGGTGATGGGCTACTGCGTGTGCGTGGCCAAGGGCGGCGCCGAGA CGCTCAAGTTCAACATGGCGCTCGTCCTCCTCCCTGTGTGCCGCAACACC ATCACCCTGCTCCGGAGCCGCACCGCCGCGGGACGGCTCGTGCCGTTCGA CCACAGCCTCGGGTTGCACAAGGTGGTCGCCGCCGGGATCGCCGTGGGCG TCGGGCTGCACGCCGTCTCCCACCTGGTGTGCGACTTCCCGCGGCTGCTG CACGCCACCGACGACGACTACGAGCCCATGAAGCCGTTCTTCGGTGACAC GAAGCCGCCCAACTACTGGTGGTTCGTGAAGGGCACGGAGGGGTGGACGG GGCTGGTGATGCTGGCGCTCATGGCCATCGCCTTCACGCTCGCCCTGCCG TGGTTCCGCCGCAGGGGTAAGCTCCGGCAATCCAAACCAAAACCGCTCAC TGGCTTTGTTGAGGGCTTGCTCAACCGCTTCACTGGGTACAACGCCTTCT GGTACACGCACCACCTCTTCATCGTCGTCTACGCGCTGCTCCTCGTCCAC GGACACTTTCTCTACCTCACCAACAAGTGGCAGGAGAAGACGGTACGTAT AATGCTTAATGCACCTGAACACACACACATTTCTTTCTTGCTTGCACCTG AACACAGACACACACATTTCTTTCTTGCTTTCTGCTTTCACTCTTTCGGG AGGAGACCGATTGAGACGTGGCATCCGACTGACTATTAATGAATCTCTTT TGTGGGTGGATTACTGATATGCATGGTACGTATGCAGACGTGGATGTACG TGGCTGTGCCGATTGTCATATACGCGTGTGAGCGAGTGACACGGACGCTG CGGTCAAGGGTGCGGACGGTGAGGAAACTCAAGGTGGCAGTGCACCCCGA ACCGGCGAGCATCCTGTCGCTGCACTTTCCCAAGTCGCAGGGTTTCAGGT ACAAGAGCGGGCAGTACATCTTCGTCAAGTGCGCCGCCGTCTCGCCATTC CAATGGTAAGCAGCAAACATCCCCGGCTGGCTGGCTGGCTCACTTAATTA ATCGGTGATCTGATGAACGAATCGGACGTACGTGCAGGCACCCGTTCTCC ATCACGTCGGCACCCGAGGACGACTACGTCAGCGTCCACATCAGGACCGT CGGTGACTGGACTGATGGGCTCAAGAAGGTCTTCTTGAAAGTATTACTAC TACTACTTTCAATCTCTTATATCTCCCTTAAACTCTAAAACCTCGCATAT TTCTGAGCATCGGTACTCCTTCCGTTCATTAATATAAGATGTTTTAGCTA AAATGTGTGTGTTTACGGTTGCAGGATTTCCCACCGCAGCCTAAAGAGGG CACACCTGTGATTCTCCGGACAGAGTATGACCGTGACGGCGCCATATCCA ATCCGAGGTATGTACGTCGATGATAACCCGCTCGAGAAAAATGGTTTTAT CCATAGCTTAGCGGATTAGGATTTTCTCATCACCGGGTTAGTGAAAAAAC GCATTGCACTTTCTCTGAAGTGTGCCAGCAGCTTCACGTTTACTAGACTG AAGTTTTTTAACATTCTCCTTCGGCTTAAGAACACAAATCTCATCTTCTA GTAGGCAAAGCCAGCGCATGGTTCTCGTGGAATACATATAATATAATGAG ATGGTTTATGTCATCGCTTTGAGAAACACCTAATTACCTCCAACTGACAA CGTTGTTTCACATGGCGAAGTGTGCAAAAATAGGAGTTGATCTGTGAAGG ATCAAGATCCTTGTCGTTGTTGCACATGGTAGCGGATGGCCGATCCCCTT AGGTTAAGGTGCACCTGCATCAATGCGTGAATAAAATCCATCTCCTCGTA TATCCATGTTTTCCCCATGTGATTGGTGTGTCTTGCCATGTGCATACAGT AATAAATGTGATGGGGAAATATCGTGCTTATTGTGCTGCAGCTTCCCGAA GTTGCTGATCGACGGGCCGTACGGCGCGCCGGCGCAGGACTACAAGAAGT ACGACGTGGTGCTGCTGGTGGGGCTGGGCATCGGCGCCACGCCCATGATC TCGATCATCAAGGATATCATCAACAACATGAAGCGGCTCGACGGCGACGT CGAGTCCGGCGTCGGCCCCGGCGACACGGGAATGTCGTTCCGGACCCGTC AGGCCTACTTCTACTGGGTGACCCGGGAGCAGGAATCCTTCGATTGGTTC CGCGGAGTCCTGGACGAGGTGACGGAGGCGGACACGAAGGGCGCCATCGA GCTCCACAACCACTGCAGCAGCGTCTACGAGGAGGGCGACGCCCGGTCCG CGCTCGTCTCCATGCTCCAGTCCCTCAACCACGCCAAGCACGGCGTCGAC CTCGTCTCCGGCGCCCGCGTCAAGACCCACTTCGGCCGGCCTGACTGGCG CCAAGTCTACAAGCGCATCGCCGACAGACACGCCAAACAACGAGTCGGTC AGTACACCAAAACCAACTACCTACATACTCTCACGGTTTCGCAATACACA CTAGCGTTACCTCTCTGAATTGGCACTAACTCTGTATTAATTCTTGGGTA CGACAGGAGTGTTCTACTGTGGCGACATGGTGCTGACGGAGAAGCTGCGC AATCTCGCCAAGGTTTTCTCCAGAAACACAAGCACAAAATTCGAGTTCCA CACCGAGAACTTCTAGTTGTATTTTAAGTCTACTACTCCCTCCGAATAAA ATTAGTTGACCTAGATTTATCTAGATTCAGT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.