Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA005646

[Submit comment/correction]

Sequence	AA005646
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA005646
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	TTTATAACTGCAAGGACTGAGCCGTTATGAACTCCTATTACCTCATGAAG TTCAGCCTGCTTGTGGAGATGAAGCTGGCCTTGAAATTAACTTAAAGTTG ACCTCCAATCGATATATACATGCATCCAACTTAGCTGATGTATTTACACT TCGGACATACAAAAGAAACTGCGAAACATCAAAGGTGGTACCAAGAATGA GTGCTAGTGAACAATCTGTTGATAAGCAGTGTGGTCTAAAACTGAACATG ATATGTGATCTTTACTAACTGAAAGTTTACTTTAATTAACTGAAAAGTTT AGAGATATATCATTGACACTTCATATACATTCATGATAGCTCTAACAAAT GGAAAGGAACGCAAAATGCAGCAACCCTGATTCCTAATGACCAAGCATAT AACCTCAATCTGAATGTCGCTAGAAGATTTCTTATATATACAGAAAAGCT TGCTAGCTTACTACCAAGTAATATATTGTTGAGGCACACAAAACTAAAAC AATTGGTTGAGCATATATCCACGACTGGAATCCACAGCCAAGCACAACAG AATAGATAAACTCAAATCCAAGCAGGCCATCATAGTAGTACATTGTTTTC CAGCGCTTCTCCTAGTAAATGAACTAAGAAACTCTTCTATTACAAATAGA AGATTTTCTCTCAGTATCAATGGAGAAGTGAAGCAGACAAGACAATTAAA GAGAAGAGGAAATACATGGTAACTTAAAACCGGTACCTTAAAAAAACCCA CTGGTTTCACAATTTCTATAATAAGATGTCCTGCCTATTCATTTTCCTCT CGTGTAATTGTAAAGTGGTGCTCTTCCGTGACCTCACATGATATATCAGT TCTCTTCTCATACCTTAATAGCAGCAGTTCTGGGCAGTTATCTCATAAAT CCCTGATTTCATCTTCATGAAACTCAGCAGCCTATATGAAGACAAAAGGC ATAAGCAGGCAAAGAACCTACAATACACATAAAATGAACTGATATTTTTT TACACCGTGCAGAACAAGGAGTAAGATCAAAGCCATGTCTACAATTAAAA CAATGCAACAGAAAATTTGCAACTAACAAAGTGATAAATGAATAAGAACC ATATTTTAAACCCTAACCAATTGTATAAAAGCATTCAGATGTGATGTTTC ATTCCATGATTTGTGAAGCAGCACAAGGGTTGTGGAGGAACAACTCCACC TTGCTGCTATAATAAAGACAGCACAAATGTTGAAGGAACCACTCCAACGT GCTGGGCTAGATATCGCTCTAGGGGCGGTGTGCTAGATATCGCTCTAGGG GCGGGGCTGTCAAGAGTTTAATCCAAAACTCTCAACATACTAGATCTAAT CCAAGATCTAAAACAAGAACACAAGGTTCCATTTATTTGATAGTAGTGGG TACATAGTCCGAGTTCCATAGATAGAGGTGAGGACCTCTATTTATAGGCC TCATGAGCCTCCACTTCTTAGTTCTACTTATAGCTAGAAGGCTCTAGAGA ATACTACTTAAAACTAGGAAGTAAACACAAACAACATGGTTACAACTCAC ACTAGAACACTCCAGAAACTACTACAACACATATGACTAAAAGACCAAAT TACCTAGAATATAGTAGAAGCGTGTAGAAACTAGTACTGGATTTTATTAC TGTTTTATTCCCACTACTGTCCCTCATCATCCTCCCCTGGTTGTTTGGAA CTCGACCTCGAGTTATCTTCATAGAGTGCTTGTTATGGATGATGAAGAGC TAAGTCTGCCATATTGAATGTGTTGGATCTTCACGCGGCACTCGGCTCTG TTGTTCTGCAGCATCCATTCTCTTTTCCAATCCTTTCATTGTTGGCTGCA GCTTCGTCTCCAATAGAACACCAAGAACTGGAATGGATCAGCAAGGCTCT GATACCACCTGAAGCAGCACAAAGGTTGTGGAGGAACAACTCCACCTTGC TGCTATAATAAAGACAGCACAAATGTTGAAGGAACCACTCCAACGTGCTA GGCTAGATATCGCTCTAGAGGCGTGGGCTAGATATCGCTCTAGGGGCGGG GGCTGTCAAGAGTTTAATCCAAAACTCTCAACATACTAGATCTAATCCAA GATCTAAAACAAGAACACAAGGTTCCATTTATTTGATAGGTAGTGGGTAC ATCGTCCCCGTTCCATAGATAGAGGTGAGGACCTCTATTTATAGGCCTCA TGAGCCTCCACTTCTTAGTTCTACTTATAGCTAGAAGGCTCTAGAGAATA CTACTTAAAACTAGGAAGTAAACACAAACAGCATGGTTACAACTCACACT AGAACACTCCAGAAACTACTACAACACATATGACTAAAAGACCAAATTAC CTAGAATATAGTAGAAGCGTGTAGAAACTAGTACTGGATTTTGTTACTGT TTTATTCCCACTACTGTCCCTCATCATCCTCCCCTGGTTGTTTGGAACTC GACCTCGAGTTATCTTCATAGAGTGCTTGTTATGGATGATGAAGAGCTAA GTCTGCCACATTGAATGTGTTGGATCTTCACGCAGCGCTCGGCTCTGTTG TTCTGCAGCATCCATTCTCTTCTCCAATCCTTTCATTGTTGGCTGCAGCT TCGTCTCCAATAGAACACCAAGAACTGGAATGGATCAGCAAGGCTCTGAT ACCACCTGAAGCAGCACAAGGGTTGTGGAGGAACAACTCCACCTTGCTGC TATAATAAAGGCAGCACAAATGTTGAAGGAACCACTCCAACGTGCTGGGC TAGATATCGCTCTAGAGGCGTGGGCTAGATATCGCTCTAGGGGCGGGAGC TGTCAAGAGTTTAATCCAAAACTCTCAACATACTAGATCTAATCCAAGAT CTAAAACAAGAACACAAGGTTCCATTTATTTGATAGGTAGTGGGTACATA GTCCGAGTTTCATAGATAGAGGTGAGGACCTCTATTTATAGGCCTCATGA GCCTCCACTTCTTAGTTCTACTTATAGCTAGAAGGCTCTAGAGAATACTA CTTAAAACTAGGAAGTAAACACAAACAACATGGTTACAACTCACACTAGA ACACTCCAGAAACTACTACAACACATATGACTAAAAGACCAATTACCTAG AATATAGTAGAAGCGTGTAGAAACTAGTACTGGATTTTATTACTATTTTA TTCCCACTACTGTCCCTCATCATCCTCCCCTGGTTGTTTGGAACTCGACC TCGAGTTATCTTCATAGAGTGCTTGTTATGGATGATGAAGAGCTAAGTCT GCCACATTGAATGTGTTGGATCTTCACGCGGCGCTCGGCTCTGTTGTTCT GCAGCATCCATTCTCTTTTCCAATCCTTTCATTGTTGGCTGCAGCTTCGT CTCCAATAGAACACCAAGAACTGGAATGGATCAGCAAGGCTCTGATACCA CCTGAAGCAGCACAAGGGTTGTGGAGGAACAACTCCACCTTGCTGCTATA ATAAAGGCAGCACAAATGTTGAAGGAACCACTCCAACGTGCTGGGCTAGA TATCGCTCTAGGGGCGGTGTGCTAGATATCGCTCTAGGGGCGGGGCTATC AAGAGTTTAATCCAAAACTCTCAACATACTAGATCTAATCCAAGATCTAA AACAAGAACACAAGGTTCCATTTATTTGATAGTAGTGGGTACATAGTCCG AGTTCCATAGATAGAGGTGAGGACCTCTATTTATAGGCCTCATGAGCCTC CACTTCTTAGTTCTCCTTATAGCTAGAAGGCTCTAGAGAATACTACTTAA AACTAGGAAGTAAACACAAACAACATGGTTACAACTCACACTAGAACACT CCAGAAACTACTACAACACATATGACTAAAAGACCAAATTACCTAGAATA TAGTAGAAGCGTGTAGAAACTAGTACTGGATTTTATTACTGTTTTATTCC CACTACTGTCCCTCATCAATTTGTGGCCATGGCTGTTTGCTAGATATCAC AAATTTAGTAGAAAATATGTAGGCCCACTGGTTAACTTTCAAGTAATGAT GTTCTTTTGTAAGTCCAGTTATTTTCAAGAGGGGCCCTAGTTCTGATATT TGAGATCCATCTGATTTATTTTTAGTTTCTCTGCATTTCCCTGAGGAACC CAAGTTCTGAAACTTCACATTTCATCTGATGTATTACATTTTTCTTCAAA GCAGCAGAAGTATACAATGAAAAAAGGACACGCCTAGCCATTTTATTATA CAGACTTGATTACTTTGTCTCATTATCTGATATAGCTTTTCACTACTTAA TCCATAGATCAACAGGTAATATTCAGTTAAAATAACCCCATCAAAAGTAG CAAATAAAGAAAAATAGCCAAACATGCTGGAAACCTGGAGGGATGAGAAT AGGCACATACCCTTATCCAGTCAAACTTGCATTCCTTCACCAATTCTACC AAAGAATGCAAAAAAGTGCACTTTTAAACACATAAGGAACTGCTTTCAAA AGTGCCAACCATTAGCACGCCAGTAGTTGCGTGAGTTTGCAAGTGTGCGC CCATGTTTGATTTTCTTTGACAATTTGTATGCAGTCTCCACTTTGTCCAT CTCCAACAGCCTGTTATTCAGTTTGCTATAAACAACTCTCCCGAGACAGA AGCCTTCCCTAAGTGATTCCTCCACCACAGAAACAGCAGCATCAACCTTA CCCACATTGCAAAGCCCATCTACAATGAACTCATAAATTTCTTTATCAGA TGGATGCCCACACTCTTGCATCTCCTCCCAAATCTTCAACACTACCCCAC TTTTCCCAAACCTGGCAAGCCTTTCGAGCAGAAGCTTGTATGCCTTCAAG GATATTGTACAACCAGCCTTCCTACTCTTTTTGTAGATCATCAAAGCAGC ATGAGGAGGCCCAAATGTACAAAGTGGCTCAATGAATGATGTAATTACCC CAGTATTTGGCAGAACTCCTTGAGTAAACATGTCATCAAATATTTGAAGT GCATCAGCCACCCTGCGTGCTCTCAAAAGGGCTCTAATCATATTGCAGTA TGTGTCACTGTTTGGGGGACAGTTCTTGTCCACCATATCCTTGTAATAAC TCATGCATTTGTCCAAATCCCCAAGTGAGATAAAATTGGAAACAAGTGCA TTGTAGGCCATCGTAGTTGGACCGTATCCCTCTTGCACCATCTTCTCAAA CACCCTGACTGCCTCCTCAGCCTGCCCTGCTCTCCCCAATGCCTCGATGA GATGGCAATGCGAAACCTCGTCTGGCACTAGCCCATCCTCCAGCATCATT GCCCAGAAATGCTCCAGCTTACCAACCTTCCCAAACCTTGCCCAACCACC CATCACATCGTTGTACACATGTTTATCAAGAACGAAAAGATCTCCACGAG CAGCTTGTATGAGGGAACTGGCAACGCCGACATGCGACCTCCGGCAGAGG CAGTTAATGAGAAGAGAGAAGGCCTCCTTTCTGTCACAAGTTTGCCCAAT TCCTACTCCAAATTGGTCGCTCTTCAGCAGTTGGACGGCCTTGCTGACCT GCCTGGCAGCAACTAGACTATCGATGATGATCCCCAGCGTGGTTAGGTCC GGAATGATGCCCTTTCTCCGCATGATCTCCAGGGCATTCTCGAGGAAGGT GAAGAATTTCCTCCTGCCCAAAGCCCTGATGACAATGTTGCAGGTATCGA TGGAAGGGGGAAACTTGGCGTTGGAGGTGGCCCAGTCGAACAGGTCAATA ATGGCAGCACCGCTGAGGTTGCCACGGCTGACAGCATCGGAGAGAACCTC TGGGGAGAGGGCAGCGGTGCCGTCTAGGCCCGTGGACGAGAGGGCTCGGT GGAGGGCGTCGCGGCCTGCTGGCTTTTGGAGGAAGATCCCGCAGAGGCGG TCCGCCGGAGACAGGAGGAGGGTGGTAGCAGTAGCAGTAGGAGCTGCTCC AGAATCGGGATTAGGGTTAACGGAGGGAAGGGAAGTGGGGGCTGGGGCTG GGGCTGGGGCTGATTTGTTCGGGTTCGTGGCGGAGAGAAGGCGGATGGAG GAGACGACCACGTCTTCCACGGAGGAGGAGGAGTAGCTGCGGCTGCGCAG GAGAAGGCGGCGGGCCATTTTGGGAGTTTCGGGTGTTCTCCAGCGCCACC AAATCCTGAACTCCAGCGCCTTGCTCCGGCGTCGACTGAACTCCTCCTGT TGGCATGGGCTTGCAGCCCAGTTAGGCCGACCTTGCCCTCTCGGAGGAGA GGTCGTTGGGCTGGGGGAGATAGCTCCGGCGGTGGTGACCTCGAGGGAGA GCCGCCGCGAGGATGCGGCAGGAAGCCGCGACGGGAGGGGCGGTGGAGGC GGAGGCGGGGTGGCGCTCCGACGGCTAGGGTTGGATGGGGAGCTCGGGGC TGCCCATCGGGGGAGAGAGCGGTTTTTCTGTTCGCTGGGACGAACGAACC GGTATTTCCCCCAAAAGAACTGCTCTACACATCCTCCTCCTCCCATCGCC GCCACCGCGGCCTTCTTCACTCGCCGCCGTCCGCCCGCGAATTACTTCCT GTAAGACAGCAGCGCATCCTGGGCGGCGATGTCGCTTCCCCCGCCGCCTC CGGGCGACGGCGCCGCCGCGCTCCCGCCCCCGCCGGGCACGGACATGACG GGGATCTGCTTCCGCGACCAGCTGTGGCTCAACACCTACCCGCTGGACCG CAACCTCGTCTTCGACTACTTCGCCCTCTCCCCCTTCTACGACATCACCT GCAACAACGAGTCGCTCCGCTCGCGCCAAATCCACCCCCTCGACATGTCC CAGCTAATGTAAAACCCTAGCCCCCCATCCTCCTCCTCCGTCTCTCTCGT TCCCCCCAATTCGCATGAAGGGAGGGTTGCTATAGCTTCCCTGTTCCGCA GGAAGATGACCGGGATGGAGTACGTGCTGAGCGAGGTGATGGAGCCGCAC CTGTTCGTCATGCGCAAGCAGAGGAGGTCCAGCTCCGAGAAGGTCGACCC CCTGCTCGCCTACTACATCCTCGACGGCTCCATCTACCAGGCGCCCCAGC TCGGCAACGTCTTCGCCTCCCGCATAGTAAGGCCTGGAGTACTTATTTTC CAGAAAATTTGCAATTAGCTTTTGTAGTCCATTGACCCACAACAGCATCA ATGTGATAGGATTGTTCAACATTGTCATTTGCACACACTTTCAGTGATTC TGCCAGTCTAATCGCAGAGTTTCAGATTACCTGCCTGTGACTTCCTTTGG CTATTCCTGTGACATTTCAGAGTAGGACTATGTATCACATATCAAAAGCA TTTTCTATAGCATGCTCAAAATTGGAGAAGATTGGTAATGGTATGGACTT CACATCTTACCTGCTTCTTTCCTCCTTTCTTTTTTTACTATGTCTCCACA CGAAGAAACATCTCTTATATTGATAATGTAGTATTAACTTTTGCCAGTGA AATACCTGGATAGACACCCAGCTGATCTTATACATTGTGTTTTTTCGTGT GATTGGAATAGTGGCACTTTTGGTCAGGATAAATGCAGTCATTGAGTCAT GATTAGGTTCGTAAAAAATAAGTGATAAGCATTTCTAGAGAAATTGAGAT TTATACCAAGTAGTAGCAAGTTTCAGAAAAATAGTTTCCCTCTAAAAGAT GGGTAACTCTAAAATGATCTGAATTTTAGTTCTAGCGTTGCCAAATTTAA TTCCCTGTTTCTCTGGTTACAGAAAAGAATCCAACCTCAATTTTTTTCTT GACAGACTTCGATGGCTAAATTAATTTCAACTTGGCATATTACCTGTATG GACATCCAGCTGATCTTATGCATTGTGGTTTTTCGTGTAATTGAAATAGT GACACTGTTGGTCAGGATAAATGCAGTCATTGATTCATGATTAGGTTCAT AAAAAGTAAGTCATGAGCATTTTCTAGATAAATTGAGATTTATATCAAGT AGCAAGTTTCAGAAAAACAGCCCCCCCCCCCCCCCCCTCCCTCCTCCTAA AAGATGGTAACTCTAAAATCATCTCAATTTTAGTTCTAGCGTTGGCAAAT TTAATTCCTTATTATTTCTCTGGTTACAGAAAAGAATCCGACTTCTTTTT AGTTTCTTGATAGACTTCCATGCCTAAATTAATTTCAAACACCTAAATTA GCTTTCCTATCCAAGATTTGCTTACTCTGTTACCAAAATTTGGGCAAAGG TAGGTGTTTCAGATTTTCTGAATATCAAAAGCTGGGTGCTTACCAGGAAA CCAGTGCCTGGTCTATTTCATGGACTCTGTCAAGTTCATTTCTGTTATGT TGCTCGGTCTACCTTCAGTTTCTAGCCTTCATTAAAACAGCAATGACATT CTCCAAAACCTACCAATTCCAAAAACCTGGTACCATGTGGGATTGCTAGA ATTCTGGTGAAACTGGTTTCTGTAATATGGTTAGCCAACCGGAGTGAGCA CTTGTAGCATGTGCTGGCTCTTTATTATGTATTCACATGTGCTTGGTAGA AATGATATGATTACAAATTAGAATTACAATTTGATGATATAAGACCACTC CTTAACTTTACATTTTCATAATCATAAATAATGGCAGTGGGCATTGGTCT TGCAAGATCACTTGCAGGAAACTGTTGCTACTGCATTTCACAACTTGTTG CTTATGATACATGCTACTTCCATTCATGTTACGTTTCCTATTTACCATGA TTTGCAAAGCAAAACTAGCATCACTGTATCTCTGTTTTTCTTCTCTACAG CGGAAACAGAGTCTGATGCAGCCGCTTCTGAATCGAAGACCCAGAAGGAA GCAATTGACTTGAAGGAGTTGATACGAATTGATCGCATCCTCATGGGTTT GCAAAAGAAGGTACTTAGTATTACTTCTACTTTCATGTGCACCGAATGTC TGACTTAGATAGCAAAACTTGCTTACTGTTGCTACATGGACCTCAGTAGA TGGTAGCTTTATCTTACCCATAGTGTGTTCATCAATCAACCATTTTTCTT TTGACTTGTTTAGTGTCAAACTAATCTCAAGCTTCACGCATATTCTTGGC AGCTGCCTCCTGCTCCGCCCCCTCCACCCTATCCGGAGGGCTATGTCCCA CCAGCTGCATCAGAAGAGAAAGCGCCGGATGATCTGCTGGCTTCAGAGGC ATTGCCTCCCGCACTTGACCCTATTATTGATCAAGGGCCAGCAAAAAGAC CAAGATTCCAGTGAGAGATTTTACTGTCGATCAAGTAAACTAACTGACAC GATAACATCATGTATTGCAAATCAGAGTAGAGTTTTGTGAGCCCTGAACT GGAAGGCACAGACAATTTTCTCGATGTGCGC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.