Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA002520

[Submit comment/correction]

Sequence	AA002520
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA002520
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CAGCCTGCTAGAGTTTGTGGCGCGGGACTTATATAACCAGTGCAACTGAC ATTTTGATTTTAGAATAACATGTTGATGCAGTGTTTTTTCATGTTTTCAT TATTTTTTAGATGGTTGATCCATTTTTCAACCATGTGTGACATGTAATCT CTTATAAACTCTGCACTCCAATAATTTAATAAAGAGTCGTATAGACCGGA GCTCAGTCTCCTTTTTGAAAAAAATGGATGTCCCCCTCCGTGAATATCTT TTTGGTGTTCAATGGTAGACAAGTAGTCCAAGTAGAGGTTCCAAATAGCC TGAATATGCTCGCTCCTGTGCGAATATCGCCCTGCAGCTCCACTCCCTGG AGCTTAGAATCTAGGCAAACCCTGAAGCAGTACGGCAGACAGTCGCCACT CGCAAGTGAGTATATCAAAAAGTTCCAGTAGTTCGTCACATGTTATACTA CCTTAATTTTCCGCATTCGTTTGACAGCGCAGGCTTTGAGTCTTGGGGGC TCGAAACTCGTACTCGTGCAGGTGGAGATGGGACGCCGATATGGTGCGGA GTTGTATCTGCTGCTTCTGCTGGTACTCTGGGTGCCATTCCTGGGTGCAT CCGTCGTTCAGGACGACAGTAATAGGACGCTTCCGTCCGCAGCCACTCTC GCTGACTGCCCGAAGCGCTGCGGCAATCTCACCTTCGATTATCCCTTCGG CATCGGCTCCGGCTGTTTCCGCAATCCCGACTTCGAGCTCACCTGCGACC ACACCACCCACCCGCCCAAGCTGCTCCTCTGCGACGGCACCACTCAGGTT ATGTACTCTATGGACCTTGAATCGGTACTGGTCGATTTCGAACAAAACGT GATCGGCGTCGCCTTTTCACTTAGCATTCCTGTCAGATCCGGTGTCGATG TTTACGACATGTCCTGGAGAACTCCAGGGAGATCTTTGAATACTAGGGGT TTCATGCTGAATATCACTGGTTGTGACTTCGATGTATCCCTCGTCGACAA GTCAAATGAAACCACACTGCAGTGCACAACTTCCTGCCCAGATGAAAGAA TCACAGAGGCTGTGGCCACTGAGAATTGCAACGGCACCGGATGTTGCTCC TTCATCTCGGATGCTTTTGTGACAACCATCAATATAAGGATTGCTCGTCA CAACAAACACAAACTCAGATCCCTTGATGGAGGTTCATTATGGGACAGAA TCACATTAAGTTCCAAGCAAACCCAACTCTCATGGGCTATTGTGGATCAA CCAAACTGTGCAAGCACGGAGGAAAAGGTAGATTACGCATGTATCAGCAG CGACAGCAGCTGCACCGACCAGGGAAACTTGTTGATAAATTATGGGTACA TCTGCACCTGCAATGATGGTTATTTTGGGAATCCCTACATCCTACATGGT TGCTCACGTGACAGAGGTATCAATTCCACTCCATGAACTAAGTACCAGTA ATTTCTCTATTCTAAAACAGTAGCGTCGAGTACTTCCATAGATACTGAGC GAGAAATTACGCACACTGACTCGACCGAATTTCTCACGTTAAAGCAAGTT TAGTAATTCAGAGGCCTGGTGCTTTGCCTCCTTTTCAGAAATAAATGAAG TTTAATTATTATTTTTGAAATCAAGGTAGCGTAGACTCTGTATCAAAATG ATGCACAACACCTTTTTATTTATTATTCAAAAAGCCTTATAAAAAATATT GGTTAATCCGAAGTTACCTCACTTACGACAACTATCGCAACATTTGCTTG ATTTCAATGCCCCAGGATGCTGCCATCGTCGGCTTCAATTGTGTCGGAGC CCGACTCTCACCAACCGACCACCTCGCCTCTAAGACCATGTACAATGTAA GGTGCTTAGAGGAGTGCTTACAAAAATAAATCAACCATTTTGTTAAGCAT TGATACTTATTTGAATAGAAGAGCTACCTAGTTATGCATCTACCTAGTAT AAATAAGCACCGGTGCTTAGAGAAAACCCGGTTATTTTTCTAAGCACCTT CCTAAGAATCTTGCATTGTATATGCTCTAACCTACACTGCAGCCCTAGGG GCCGAACCGTAGGAGAGGGAGCCACCATCTCCACACTGACCACTATCGAT CTACACAGAAGATGATATCCCCACCGTCCGCCGCGCTGCCGCGAAAGCGG CCACGCTGTGACTCTTGGGGTCGTGCCACGCCCAATACTTAGTGCACCGT CCTCTCAGGCCATCTCCTTCAGACAAGGACACTAGAGAAGGCCCCGCCGT CGCCAGTGTCGGCCAGGCATTGCCCGGCCATGCCCTCTGGCGACGGCGGG GGAGGAGGGGGAGAGGGATGATGTGCTACTAGCAGAGATGTTTAGGGTTC CCCGCTATCTCCCCTCAGGAGTGAACAAGAGAAACGATAGCTGTTTTTGT ATGTTAGTGATCGACTATTATTGGTTTTCTCATATAGAATAAGATTTGGA CGAAAATGGAACTGCAAAGCACGGTATATTTTAGAAGGAAATTCAACCAA TCCGTCCATTTAGTACCATTGAGAACCCTCCTCTAATCAATATTAAGCAG AGTCTGTGTGAGCATATTGGACACTAATACATTCTTATGGTGAACAATGT TGTATAATGATGGGTATTGTTGAGCCAGAGACATATCATTCAACCAAACA TCCTCCTAAAAACGTACGGCCGATCCGTCTTCAACCACAAAAGAACCTCT ACTGAAAAACTCGTCTTTCACATGCATCAAACCCTTCCAAAAAGGAGGGT CGGTACGTTTCAGTTGAACCTGCGCAAGAGTTTTGTTTTGAAGGTATTTA TTTTGGATCAGTTCTTGCCAAACACCTTCTTCAGATAATATTTTAAAAAG CCATTTCCTAAGTAAATACTTATTCTGAATTTCTAGCACCTCTGTACCCA GCCCGCCCTGATCTTTGGGTCTACACATTATATTCCATTTTGTAAAATGA TACTTCCTCTTATTTTCAGCAATTTTCCAAAAAAAAAATCTAGACCTTTA GAAATCCAAATGCTTTCTAACCCCTTTTGGTAACTCTAGAAATGAACATA GGCATACTAGAAAGCACTGAGTTGATCAAAACAAGTCAGTCACCATAAGA GAGTAATTTGCCTTGCCAACATCCTAGATTCGACATAAAATGAGTCTCTA CCGGATTGCATTTAGAGTTTCAAAGTTTTCTGTAGTGGCTAGGTATTCCA AGGTATCAAAAAGGCAAAGTACCAGATTCACAACCAAAAATCTGTCCATG TTATTGTTGCATTTTATTTTTATTAGAAAAACAAAAAAAACACTCTTGTG GAAATTAATTTTCATCCCTGATAGTTGTTCAAAAATTTACAAAATAAGCT TCATATTAACCGCTTTTTGTATAAGTAAAATAGTATCATCCGCTTATTGT AAGACAAAATCCCACCCTCTACCAAGTAAGGTATGAGACCGCCAACTTGT CCATTCTCCTTTTCCCTAGCAATAAGGATTGCCAACATATCTAACAATAG AGAAAGCAGATCACCATAGCACAACCCTTTCCTGGTTTGAAAATAGCGGC CAATATCATCATTAACCCTTATTCCCACACCCTTATACAAATTTTCTAAT CCACTCACACCATATGGGATCAAAACCTTCATACATAACACTTGTCGGAG GAAAAACCACTTTACTTTATCATAAGACTTTTTAAAATTAATTTTAAAAA GAACTCCATCCTTCTTCTGTCGATGAAGCTCATGAATTGTCCCATGTAGG AAAAACACTCCTTCCAAAATGTGGCGACTGGGCATGAAAGCTGACTGAGT TGGCCGTATCACTTTATGGGCCAACTTAGTTACCCTATTGGTCGCAACCT TCGTAAAAATCTTAAAACTCACATTCAAAAGACATATTGGTAGATATTGC TGGATTTGCACCGCATTTTTTTTTGGAAAAGGGTGATAACTCCAAAATTC AATTTATATAATGGTAGTTCCCCTTTCTTTATAGTTGGACAAACAATGCC AGCAAGTCCTTTTTACTCCCAAAAAGTCTGATAGAATTTAGTAAGAAAAC CATCATGACCTGGAGCCTTATTGTGTTCCATCTGAGAGATGGCATCAAAC ACCTCCTTAGTGAATTCAGCTATGAGAATAACATTCTCCTGGTTCGGTAA CCGTGGAATATCCTCAGTTCGGCCCTCCACCATATAGAAATTATTTGTAT GAGGCTTCCCAAAAAGATTTTTATAGTATTCAGTTATGTAAACCTTCAAG TTTTCTTCACCAACAATGGTTCCTTCATCTTGTTCTAACTGAAAAATCTT TTTCATCCTATGCTTTTCATTTACAATAAGGTGGAAATATTTCGTATTAT CCCCCCTCTTGGATATGTTTAACCTTAGCTCGTTGCGCTCATTTAGTTTC TTCATCCCTCCTAAGTTTATTAACACATTCATTTGCCTCCCGAAATTCCT TTTTTCTCTCTCATTAACTGGGGTATATTCGGCTTTGAGATCCAAGTTAT CGATAATAGCCATCAAGTGTTCCTTTCTTGTTTATATTTTTCACTAATAG TTTTTTCCCAGCCCTTAAGAAAATGACACAAATGTCTAACTTTATTTTGC CAAAGGATGGGTGTGTTACCATCCACCACACTGTTCCATTCAGCAGCAAC CATATCATAAAAATCATCCTGCTTCAATCAGCATAGTTCAAACAAAAATC GTGACTTATTACCCAAATGAACTTGATTACCCGAGTGAATAATTAAAGGT GTATGATTAGAACAAGATCGTGTCAACGCCCTTACAAAAACAAGAGGATA TTTTTTTCTCCCATTTTAACACTTGCCAACACTCTATCCAACTTTTCATA CGTTGGATTGTCGCTTTTAGTAGTCCACATAAACTGTCTACCCGAGAGGA CAATCTCCCTTAGGTCTAAACTCTCAATGATTGCATTAAACAAAGGGCCA ATGCGGCTGAAAATTATCATTGTGTTTCTCTTCTCTCGTACGAAGAATAT TGAAAACATAGGAAGAGGTTCCGCTTCGCACATTCTTACTAGTTCCGATA AAAACTCTGCTTTATGGATCTCTTGTGCGGCACCATAAACCGGCACAAAT ATCCATTCAAAACCATCATGCTTAGATCGTAAGTGTAACTTGACACAAAA ATCTCCGGTGACCACATCCATAACTAGTAGAGATTCCATATTAATCTCTA CAAGGATATCCCCTGACCGTCCATGCGGTGGTTTTTAAAGAACTGAACAG TAATTAGACATGTCTGTCTCCAATAAGGCAATGAAATCTAAACGGTGTTC TCTTTTGGACTCTATGACAAACCGATGTTTTGCAGGATCCCAAAAACCTT CACTATTCCACATTAAACCTCTTAGTCCTATCATGATCTATTCTTTTTAA TTCTGACCCTCGTGTTCCTAGGTACATTAGTTTTATCATAAGACTTGCCT CTACGGGTTCGGACCACTTTCCCATTTTGAAATATAACGTCCTCTTTGTG GTCACATAATTCCACATCCACCAAATCACCACAAAGATTGGATTGGATGC ATGAGAAACTAAGAAGTTCTGGGGACCATCGTTCCTATTGTTTGTGCCCA TGTCATTCTTCTCCAAAATAGTGAGTGCCCGAGTTACTTCATTGTCCTTA ATAATTTTGGCTGAAATTAATTGAATATCATTTGTATTCATTTAAGTCAA AAATTTAAGACGGATTCCCCTTAGATAGGCCACAATTACTGCAAAATAAG CCTTTGTGACCATAAGAGAGATCAAAACTGTATTTTAGAACATGAAATTC TTCGCTGACTATTCTGACGAGCTCATTTTATTTGGATCAGGTTATAACCC ATACGAACAAAGAGCTAGCTGTGCACGTTCGTGTGGGAACATTAGCGTTC CATTTCCATTTGGCTTGGAAGAAGGTTGTTTTGCCAGAGAAGAATTTTTC CTCAACTGTACAAATACATCTTATGTCACCCTGGGTGACTCTGTCCAGGT GACCAAGATAAGCGTTGATGACGGGCTCATCCAGTATAACGCAATTGATA CAATAGAGATCTCTGACGGTGACGGCCCTGAACTTTATTTCCAGTCTGGT GAATCAGCGTCCATGCAATGGGCTGTTGCAAATTTAACCTGTTTAGAGGC ACAGCAGAATACCTCTGGATATGCATGCGTGAGTACAAAGAGCAGGTGTA TACCGGTTTATACTCAGGATTTTACATATATAGGCTATCGTTGCAAATGC TCGGACGGCTTTCAGGGGAACCCGTACGTTCTAAATGCTTGCACAGGTAC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGTATTAC AGCTTACAGCTCCAAGCTGGAGCACAGGATGAGCAAGAACTGGACATACC CAGTTCACACCTAGAACACAGCCAAAAAATAGGAAAACCCCTCAGGAGAG GCCGGCACTCTAACTTCCTAGCGCGATTACCTTGCCAGCATTACGCCATA GCCTAATGTCCTCTCTCTTTCTCTCCACATATTTTTGTTATTTTTGTAAA CATATTTCTTTTAACAATGGTTCTTCTTTATCAGCTGTATATATATACTC ACATGCATGTTTTATTTATAAAATGATAGATTCTGATGTACTTCCTCTGT CCTGTAAAGGATGTCGCGGATTTTGCTAAATTTAAATGTATCTAGACACT ATTTAGTATATAGTTTTATCTAAATTTGGACAAACTTGCGACACCCTTTT CAGGACCGATGAGTACTAGTATTTGAGTATGCATATGTAATATTTTTTGT CAATTTGCAGACGTTGATGAGTGCCTCCTGCCAAATAGTTGTGCCGGAAT ATGCCACAATACGATAGGAGGCTTCTACTGTAGCCATTGCCCTCATAAAA CAGAGTATGATGCAGTAAAAATGAAGTGTTCTCCAACAAAGCAACAGAAT CTTATCTTGGGTAATCATATCTTATTCACGTGTCGGACACAGATAATACT TATATATTTGTACTACAGTACCTTTCTTTGGCGCAGGATGAGAACAATCT AACAGCCCATAATGATTGCAGGCATCACCATTGGATTGTGCAGTGGATTA GCGGTTATACTTTTCATCTTATTTGGGATATTCCTTATTCGTAGATGGAA AAGAGATATAAAAAAGCGACTAAGGAAGAAGCATTTCCAGCAAAACCAAG GAATTCTACTGAAACAATTAATATCACCGCGGGAAAATGCAAGTGAAACG ACTAAGATATTTTCCTTGGACGAACTGGAAAAGGCAACAGATAATTTTGA TCCCACACGTATCCTGGGCCGTGGAGGACATGGTACGGTTTACAAAGGAA TCTTATCTGATCAGCGTGTGGTGGCCATTAAGAAGTCTAAGGTCATTGAG GACGGTGAGATCAATCAGTTTATCAACGAGGTTGCAATCCTCTCTCAGAT AAACCATCGAAATATTGTTAGTCTCTTCGGATGTTGCCTGGAAACTGAAG TCCCGCTATTGGTATATGATTTCGTCCCCAATGGTTCCTTATTTGAAGTT CTTCATGGCAATTTAAGTAATGAATTCCCTTTATCTTGGGATGACATCCT AAGGATTTCCGTAGAAGCTGCAGGTGCTCTTTATTATCTTCATTCTTCAG CTTCAGTGTCAGTATTCCACCGTGATGTGAAATCATCCAACATACTTCTG GATGAAGACTACACCGCTAAAGTTTCAGATTTTGGTGCTTCCAGACTGGT TCCAATCGATCAAACACATGTTGTCACAAACATACAAGGCACGTTTGGAT ACCTGGATCCTGAGTATTACTATACTGGACATCTGAACGAGAAGAGTGAT GTCTATAGTTTTGGCGTGGTGCTTCTGGAGCTACTCATTAGAAAGGAGCC TGTTTTTACAAATGAGTCTGGCATAAAGCAAAGCTTGACAAATTACTTTC TGTACGAGATGAAGGGGAGGCCAATTACAGAGATAGTACATGGCAAGGTT CTCGAGGAGGCAACTGATGAGGAAGAAATAAAAAACGTTGCCTTGCTTGC GGAATTGTGTTTGAAGCAACGATGTGAGGAAAGACCAAATATGAAGCAAG TGGAGATGGCCCTGCAGTTTTTGTTGAGAAAACGGTTCAACCCATGCCTG GTCGATCATCAGGGAAAAGAAGAAACGATGGAGGAGTTTCTAACGACTGG AACTACATCGACTTCTGACTCGTTGCCTTCTGACTTAGATAACAGACCAA ACTCATCGTTTCAATACAGCGACAGATGCTATAGCATGGAGCAACACCTT TTGGTATCAGCTACTATCCCGCGCTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.