Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA025790

[Submit comment/correction]

Sequence	AA025790
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA025790
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AGAAAACTCGCTCGTCCGATCATAGCCAGCTATACTACGGTTCACAAACC ATCCAACACGAATAATACTGTGCACGAGCCGATCGACTGGCTCAGCCAGT TCACGCGCGAGCGGTGCGTCACTGTGCACGTCACGCGAAATCGAATCGAT TCCAGTACTTTCAGTTTGACCCTCCCACCACTTGCGGCGGCCGGCCTCTT CACACCCCGAACCCGTCCACGTGCGCGGCCGTCCTTCCCGAGCCCGGAAC GGGAGCATAAATACCAGGAGGCGCGCTCCCGTGTCCACCGCACACACAAC ACTACTCGCAGCAGGAATTTACGACTCACGCACCTTCATTCCGAAAAGAG AGAGCGAGCGGTACAAGTAGAAGCATGGAGGGCGAGGCGTCGGCGGCGGG GATCAGGCACCGGACGGTGGAGGCGAACGGCATCTCGATGCACGTGGCGG AGGCCGGGCCGGAGGACGGCCCCGGCAACGGCAAGCCGGCGGTGCTGTTC CTGCACGGGTTCCCGGAGCTGTGGTACTCGTGGCGGCACCAGATGGCGCA CCTGGCGTCGCGGGGCTACCGCTGCGTGGCGCCCGACCTCCGCGGCTACG GCGGCACCACGGCCCCGCCCGACGTCGCAGACTACTCCGCCTTCCACGTC GTCGGCGACGCCGTCGCGCTCCTCGACGCCCTCGGCCTCCACAAGGTACG CGCGCGTGGTAACAGAGACTAGCTGAGTAGTAATTAATTGCCTCGCTGAT CAGCAGCCAGTAGAGAATCATGGCCATGGCAGAAAAGAATTTGAGCGCGT CATGGGCAGAAGCGATTAGTTTAGGGGAGTGTCTAGATCTCAGGCGCCTG AGAACTAGTTATGTCTAAGTCGCTGATGTCATCCTAATATTTGTGCTAAT TCTCGGTTGCAACTTAGTTGCAACTCGTAAGATTTGTACTAGTTCTCAGT TACAACCTAGTTGCAACTCATTAAATTCTCAGTTACACCCGACTTGCAAC TCATGTGTAACTTTCATTTTACACGAATCACGAGGTAAATCAAACGGTGA AAGAGACGACTGAGACTTAAGAAGTTCTCAGACGCCTGAGAACTAGCAAA TCCGTTAGTTTAGTCATGCTATCCGCGCTGAGCCGCTCACGTACGTGTCT TCCATCCCTCCATCCCGGCCGGTGCGGTGCGGCCGGGTCACGGTCTCGAT CGCGATCGGATTCGGTGGACGTCGCCTTTCCTCTTCCACCCGTCAGTACC GCTCCAGAATGTTGACACTCACGGGTGCCAAGATCCTGCAACCCAACAAC GGAAATAATCTCATACTCTCCATCTCTTAATATAAGACATTTTAGTTTTA TAAAATATAAGAATATCTAGTATAGGTTAACTCCTATTCACAAAGCTAAA AGACGTCTAAATACATCCGATTTACAAAGCTAAAATACCTTATATTTTTA AACGAAGGGAGTACTATACACGAGTACTTCCTTCACGTGTGCTTTATGTA AAAACAAACTCCTGCTTTCTTAAATTAAATAATTCAGTGCAAAAGGATGT AAGTACTGTTTTTTTTTTCGAAACAAGGATGAACTGTTGTCCTGCAGTCA ATGTCCAAAAAGGAGAGTCAATGTCATCATACTACGTACTCTGCTTTCTC TGTATCATAGTACTTACAATTGCTACTTTCTCTGTTACGCAAAATAAATC AGCATCGACCTCACCATGTGATCGAGTATGCGATAGCATGCATGCTACTA GTACACTTCCTGTCCCACGTAGATTTACTCCGTCTTGCCATATCAGTGTT CCGATTGTCGGTCGGACACGCATGAGACAAGAGTAACTGTGGAGTATGAG TTTTATTAATAGTTTAGCTATATATGCAGGGCGGTCCAACAAAGAAAACC TTCAATATCATCCAACATTATATTCCAGTCTCTAGATACACTTCTTTCAC AAAGTTAAAATATCTTATATTATAAAACAAAACCAAGGGAGTAGATTTTA TTTATACCCCTCAACTTTTTCAACCGCCAGCTTTAAGCCATCTGTAATAG ATCTCCTGAAATAATGATGGTTTTGCAAATGATATGGTAGCTCACGGAAA GTAGGCATCTGGTCCTACGACACGATATCTGGACCACCATCCTAATAATT AATCCCTTAAAAAATCTGAGAAAATAAGAATAATGATATAGCTCTTCATA AAAATGTTGAAGAAAATTGCCATAAAAATGTTGAAGAAAATTGCACACAT GGATCTCGAGTTCAAACTTTGCCCTCGAAAATTTTCTGAAACAACACGAT CACAAAGGTACCTAGTCATGGATTGGTCGATATATATCTCCTTTTTTTTC TTGGACCCGTCATCGCTCGAGAATGTGACACCCAGGGTGCGAAGATCTTG CAGGCCAATGGACATAATCACATTATGCTTTCCTTCACTTCCTTCTTTTT CCAAAGCTTTTTCAAATTAATTAATTCAGTGGAAAAAGGATGCACTGTTG TCCTGCACTAGCGTCCAAGCTGGAGAGTCAGTGCATGTACTCTGCTTTCT CAATTCGCATCCAGCATGGAAATAAATTGGCATCGATCTCATCTCGTCAT GTGATCAAGTATGTGATAGCATGGCGTGTGCATGGTAGTACTATTCCTGT CCCACGTAAATTTATTCTGTCTCGCTATATGGTTGCAAAATAGTTGGTCT GGCATGGTATAAGCATTTATCATCATCGTCATTCTTCATTTAGGATAACA GTATTGATTTGTCACTTAGCTATGTAGTGGTCCAAAGAAAACCTTGAATA TCTAATTTACAACCACCAGCTTTAACCCCTCTCTCGATCTCCTGAAATGA TGGTTTTACAAATAAAAAATATTTAGAGTCAATAGAAACTTTGAAAATAT GTGGAAATAATAACATACGTAATAATAATGATGATGATGGTAAACCTTTC TCTATTCGCAAACTTGGATGTCAAAGTCAAGTTAGTATTTCTGGACGGAG GGGGTACAACTTGAAACAGCTGAAAAACCATCAACCTGGATACGTTGTTT TAGGAGCTGAGGACTAAGGCCTAACCACACACTAGAGGTTGAATTCACAC ACACAAACTTCGCACATTCATGCGCCACTGAATTGGCGGATCGGATCTGC GAACAAAACTAATATGAAAACCTGTACAAAAGAATTGCTTAGTTCACTGA TCTCCTAAAGAATGGGAGCAATGACAGCTCTCTGAATACTGCTCCTTCCT TGCCATACTAGCACAATCTGTTTCGATGATAATTTTCTGAAACTGTTGCT CCATGGCAAAGGCCACTGCATCTCTTAGTGCCAAAGCTTCACCAATAAGT ATACTGGTCTGTCACGGGATTTATAGGACTTGTTCTGTACTTCTGCTCTG GTGGTAGCGTCCAAAAAGATCCGTCAACTCCTGTGAACTGTGGTAGTACT TGTGCCTCACAGCCGATTGAGAACGTGGCATTCACGACCTCGTTTGATTA ACTTGAAGCCGAATTTCACTAAGATCAGTAGTATTTTTTTTTATCTCGCT CGTTTTCAGTGGAGGTGCTGCTATGCCTCGCTGTTCTGTACTTGTTCTGT ACAGTACAGTAGCTTCCAAAAGCATTACTAGTTAACACCACCTGCCATGA TGTGAACAGTCCTTCCTTTAGTTTCTGTGTAAGAAGTACTATCATCGTAG TAATTACAGAGGAGAATACAAGTCTGGATATGGATTCCGGTGTATTCCTA TCTCTGTTCTGAAACTAAGAAAAAAATCAAGTCCTAAAAAAGTGTACATC ACTAATTAGGCTGAAACTTACCGATGTACATTTTGTCAAATAATATGGAC ATCTGTTTCGCGAAAGTTAGGAGATAATAATGATCAAGTTTGTAGAAAAG CCATTAACATCTACGGTCCTCCGTTCCAAAGCTTAAGGCTTATATTTTTT TTAAAAGTCAAACTATGTAAAGTTTGATCATATTTTTAGAAAAATATATT AATATTTACAACATGAAATTCATACCGTTTGATACATCATGAAACATAGT TTCTCATGGTATCTATATAATATCATAGTTCTTTATATTTTTTTAAAAAA AATTGGTCAAACTTTCCATAGCTTGACTTTTTTTTTAAAAAAAAAAGGCT TAAGCTTTGGGACGGAGGCAGTACATAATAAGAGTCATGGAATGTATTTC CACATGCATCATATGTATGTACTAGTATACTATGTCTATAATTGTTGAAA ATTATTTATAAGGGCATGGTCAAACTCTGCACCATTTAACTGACGAAAAA GTTAACTAGGGATAATGTCTCGTGTCACATGTGAACCCGTTCTAACCTTA AAGTCATGGTATCGTATACGTACGCAGTCGACTGTACCATCTTCTTTGAT GTGCCTCCTCCCGTTTCAGAAAAGGAAAAAAAACAAATGTACTGTACCCT AACACGGACACTGGTTCTCACCGATGGATGCTAAGTACTGACCATGGTTG ATCTTCTGCAGGTGTTCGTGGTGGGTCACGACTGGGGCGCCATCATCGCG TGGTACCTGTGCCTGTTCCGGCCGGACCGCGTCGCCGCGCTCGTCAACAC CAGCGTCGCCTTCATGCGCCACGTCTTCATCCGCGCCGGACCCAATGCCG TCAAGACCACCGACCAGTTCCACCGCGCCTACGGACCCTCCTACTACATC TGCCGCTTCCAGGTACGTAATCCGCCATGCTTTGTTCCTTCGTTGGTAGG TACCACCGCAAACGGATCTCAAACACCAGGCGATGGTCGTAGTTTGCTAC TAGTACTACTAGGATTTATTATACATACAGCTAGAGCCAGCTATACTTGG ATTGATTGAACACACTGAACAAAAAATGCATGAGTTTCACAACACCAAAA CTGATCGCCAAAGAAAGAAATCATTTTTCCATTGTTCACAAACCGATCGA GCAACGTTTTACAGGCACCTTCGAAACTGAAACTGCATAGATTTCCTACC GCGAAAACTCTGAATTATTTGATTCGACGTACGGGGAAGACGAGCAACCT TACAGGCAGCAGTACTGTAGCAGCACCTTCAGAAAAAAGATGGTCAGTAC TACTACGCCGTCGGTCGATCTACTTGCCGTCCTGTCGAACTAGCCGATTA TTGATGAGACGAGTGCGCGCGCACGTCGGTCACTGGATGGAGCAGCAGTT CTGGGGGCCCTCCCAGTCGTCGTCGTAATGGCGCGCCCGCGCGCCGTGCG ACGCGTGCCAGCGACGAGGCTCCCGATGCGGCGCCCACTGGTTCCCAGCG TACGGGAAGCCCAGGTTCGGCGCGCCGTAGCGACGAGGCAGCGGCATCCC CCAGCCGCCGCCGTGCTGCTGCGGGGCGTAACGCGGCGCCGCCGCCCAGC GGTGCGCGTCGACGGGATGCGGCGCCACGCCGCCATGCTGCTGCGGGGCG TACCGAGGGGCCGCCCAGCGGTGCGCGTCGACGGGATCCGGCGCCACGCC GCCGTGCTGCTGCGGGGCGTACCGCGGGGCCGCCCAGCGGTGGTGCGCTT CGACGGGCTCCGGCCCCGCGCCTCCGTGCTGCTGCGAGGCGTACCGCGGG GCCGCCCAGCGGTGGTGCGCGTCGACGGGCTCCGGCCCCGCGCCGCCATG GCTGAAGAATTTGACGGGCCTCACCAGCTTGCGCTCGATGCGGCTCCTCA GCATCTCCGGGTCCGCCGTCCCCATGATCACCACCAGGCCCGACTCCGGC GACGCACTCACCTTCTCCACCCCTGCAAATATATATATACCCCATGCATT GTCAGATCGATGTAGTGTCAGATCGATCTCGATATGTTCCACACATGCAT CAACTTAGACGACATGGATCCATCGATCGCACGTACCGTAGAGGTCTTGG ACGGCATTCCGGATCTTCTTGGCGCAGTCGGTGCAGTGCACGTTCATCTC CAGGACCACCCGCGCCATAGCTCCGCTCTGCTCTGCCCTACCAACCTATT CCGCTTATCGCAGATGCCTCGCCAGATCGGTCTGCTTTTATAGAGGAGGA GGAGGAGGAGGAGGAGCCAATCACGCCGACAAGAAAAAACTAGACGAGAT CGCGCATTACTGCCTGCGCCGATTCTCCGCGCGGCCGCCCCAAGCCGTGC CCTCTACGTATCCCTTGATTTCCTCCCCGCGATATCCGCCGGCGTGCCGA GTGCCACTGCCATTTATGCATCCGCCCGATTCTCTTCTCTCGCGCGCGTG GCGAATATCCGGTGGATATTTGCCGCGGGCAGATCTCTCGCTTTTAATCT TTGCGATTTACTACTTCTTCCGCGCTTGAGTGACATGCATGATGGGCCAT GGTGCTGCAGGAGCCCGGAGTCGCGGAGAAGGAGTTCGCGCCGGCGCACG CCAGGCACCTCATGACCCGCATCCTCTGCAACCGCTTCAGCGACCGCAAG GAGGCCGACGGCGAGCCGCAGCAGCAGCGCGACGCCGAGCCGCTCCCGGC CTGGCTCGCCGAGGCCGACATCGACTACTTCGCCGCCGCATTCGAGAAGA CAGGGTTCACCGGCGCCATCAACTACTACCGCAACATGGACAGGTGAGTA ACATACCATGGTGATCGAATCATCAACAAGCATAGTTATGCCATTGTCAA GCTGAAGCTCAAGTATCGATCTGACGGTGGGTGTGGTGTGAGTGCAGGAA CTGGGAGCTGGCGGCGCCGTGGGCGGACGCGAAGGTGAGCGTGCCGACCA AGTTCATCGTGGGGGACGGGGACCTGACGTACCACTACGCGGGGATCCAG GACTACCTGCACAAGGGAGGCTTCAAGGAGGACGTGCCGCTGCTGGAGGA GCTGGTCGTCATCCCCGGCGCCGGACACTTCATCCAGCAGGAGAGGGCGC AGGAGGTCAGCGAACATATCTACAGCTTCATCGCCAAGTTCTGAACCTTC TGATCGCATCAAACTTTCAGTTCAGCAGCTAGTCACGTGTACGTACTGGT CGATCGTGCCCACGCACGTGTATTGTTCCTAGTATTTTCAATTTTCAGTT AGTTGTTGTTGACTGTGGTCAGTTCATCTGTCTGTTAACTAGTTACCCAT GGATGTGTCCTACTCCATCTAGCTGTGTATGCTCAGCCATCGGTTCGATT GTTCAGTTCAGAGTTCAGAGTAGATAGCAAGTCGATCGTGCGCACATGTA TTAATTGTTGTTT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.