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GrainGenes Sequence Report: AA034822

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Sequence
AA034822
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA034822
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTTTCGCTACTGGTGCCTGGTTCATCCTTGAGCTCCTTGCGCGTGTCGAG
GGCTATGCAGTTGTACTGGTTGATTTCCGAGACATCGGAGGCAGGCGGCC
TGCCGTCGCTGCTGAACAAGTTTCAGGAGCACGGGCTGGTACTGAAGGTT
GCTCTGGATGTTTGGATGGTGAGCTCGATCGAGGCTGAGCGTTTGCTGGA
AGCAAGTCGTTTCCGCTGAACAATGTGGATTCAGGATTCTCATGTACTAA
TTCAGATAACATTTCTTCAATTTCTAAATAGCAGTAGCAAGTTGGCTCAT
TGTGAACTGTTCTTCATGTTACTCCAGCAGCAGCAGCAGCAGCAGCAGCA
GAGCCCAAGCGCATGTGGATGGATTCGCCGCACGTGGCCGGAGCGGCCGC
TGTCGCCTGTCGAGCACATCAAATCCCCACCACCTCCATCCCGCTTCTCT
GCAGCATCCTGTCCATCATGGCGCCTGAATGCGAGTCCGGCGACGGCATG
GCGCGGCAGCACGAGCACCTGCGGCCGGAGGGCACTCAGCCGCTGTCCCG
CATCGCGGTGGACTACACCCCGGAGGCCTGCCACCACGCGCGTGCCTCGG
GCGAGATCCACGTGACCTACGACCACCGCGGCGGCGCGCGGTGGCGGTCC
CGCCGCCGCTTCCTCCCGGGCAGCGCCGTGGCGGCGGCCGTCCGCGCCCC
GGCGGGGGACACCGCGGGTCTCAACTACAACCTCTACCTGTCCTCCCTGG
AAGGGTCCCCCGACATGGACGAGATCGACTTCGAGTTCCTCGGCGGCGAC
AAGCGCGCCGTGCAGACCAACTACTACGTCGCGGGCGTCGGCGGCAGGGA
GGCGGTCCACGGGCTCCCCTTCGACTCCTCCGACGGGTTCCACCACTACG
CCGTGGCGTGGGGCGCCGAGGCCATCGAGTGGCGCGTCGACGGGGAGGTG
GTCCGGCGGGAGGAGCGGGGCGACGAGGGGCAGCCCTGGCCAGAGAAGCC
CATGTTCCTGTACGCGTCGCTGTGGGACGCGAGCGGGGTCGACGAGGGGC
GGTGGACCGGCACGTACCACGGCCGCGACGCGCCCTACATCTGCAGCTAC
AGAGATGTCCGGGTGCCCGTCGCGCTTTCAGTGGTGGCAGAAGAAGAGGA
GGAGGAAGAATGTGAAGATTGGAATACCGGAGTTGCGCCTGATGATGCCG
CCGCCGCCGCCACCACCACCACCACCTGCAGCGCTGTTGATTTGTGAGGA
GACGGGTGCCGGAGCTGGTGGAGATTAGATCTCGGTGTCGTGAGCCATGT
AGAGCGAGGTAATATTGGTCACAATTTCTCGGCTTTGGTTCAGGTGCTCC
AACGGATGAAAATCACGAACAGTAATTTGCTGCGAAGCAACGATGTCCTC
TTTCTTGGTTAAATTAGATGTGCTAACCGGATTTTCTGAATAATTGCACA
TCATTATTATCCTCTGGTTGGTTTGGTTGTTTCTTGTGGAATGGGGTTTT
AAGGAGAAAATGGAAGTTTCCGAGTATGATCATTCTACTGCTGTCGTGGT
TCCCCTTTCCAAAATAAGATGAAAACTAGACATGTTAGCTTCACTGAACA
AGTACCAATTCTGCACAAGATTTTGTTCCAGCAGATTTCTGCACAAGATT
ATGGAACCGACCGACCAACGAACAGATGAACACATGGTTTCGTTTCACGC
AGAGTTCAGAGAAGGCCAAACCACCTCAAGATTTTTGGCTGGTTTCTTGG
TTCTGGTTGCTTGGATGTGCTAACTGAAGTTTTAGGATCAGCGAGCTGCT
AGCATTTATGCAAAAGATTGCACACGAACCAACCAACGGACAAGACAAGC
ACATCGATTTCATTTCAGGCGAGAAAGAAAAGAAAATACATTCAGAATTT
AGCAGTACTGGAGTACAAGAGGATCGCCATCACCAACCTGGAACAAGACG
TGTTTCTCCACCTCCAAGATTTTGTGCTGCTTGATTGATAGCTTCATGGC
GTTTTGTTCAGTAGCCACGGTTTTCACGCTCATCTTGAACCACATGGTGC
TTGATTCATCCAAATTCCTCATCCACATGTTTTTCGAGTAGATTTCCTTT
TTTGCTTAGGAAAATGTTATTTTTGCAATTCAAAGGCCGTACGAATAGAC
TATTACATGCTATTGTTCGGCCTAGAAAACTGCCATATGCAGTCATCATA
AAAGGAGGAGAATGGAGCTTTCGATACACCATTAGCATTTGCCTTCCTGA
TCTGTCTCTCACAGGTTGAAGGTCTTCTGGATCTGGAGGTTCACGCTGTT
GTTAGCAAACATAGATGGAGCCCATGAACCATGGAGAAGGGGATACGAGC
TATGCTCGCAACTCCAGTATTCAGGTATTTACTCCTATAAGCTAGTTTAT
TATTCAGGTTGTGCCTGGTGTTTCATCTTTTTTCCTTCTGGTTTCTCTAG
TCTCCATGTTTTCCCGGTATTTAGAAAATTAAATAAATGTGCTCATAACT
CCAAAAAAGTGTGAGAGACAACATCATTTCATGTTGTGAGTGATAGTGGA
TATGTCGGGGCACCACGCGCGTCTATACCATGGAAAAAATATCACGCTAT
TTAATATAGCGTGGCCCCTTCTCCAAACGTTGTGAAGTTATAGCATGCTA
ATAGCATGCTATTTCTCAAAATAGCATTTCGCAAAAAAAAACATAGCATG
TATACAAAGGATTTCAGGCAGTTAAAAATTAGCCAATTAACCAGTGGTGG
CCAAATGACAGAGTCCAGATAACAATGATCTCACAACAACACAATCTCCA
TGTACTGTTGATGTTGTGCTAGACAATCATACAACATGAAACATTAGTAC
AGCAGTACAATAGTTCAACTACTGTTAAAGGGCTAGACAATAAGAAACAT
ATAAGTGCAGCAGTACACAGGACAACAGTTCGTTAGAAATCATGCCTAGC
CTCTCATGGCAACAAAAGATGCAGGACAAATACAAGAACTACATAACTGA
ACTGGACTAAGAACTACAGAGCTGAACTGAACTAAGTCCTAATGTTTCTC
GAATCAAACCTGCTCGAACTTACTAACAGGTGAGACAATGGATACAGTAC
AGAACTACAGATATGTATGAATATCATGAGATGAGATGGAAATTATTACT
CCATCCGTCTCAAAATAGATGTCACAAGTTTATCAAAATTTGGACGAATC
TTTATACTAAATAGATTCATCCAAATTTTGACAAACCTGTGACATCTATT
TTAAGACGGAGGGAGTAGTACATCTACAAATCATAAAGGGCCATAGCGAG
CAAACTTTGCAAAAAGTAGTGTTTTCCTTCCAAATACTCCCTCTGTTCGG
GATTATAGGTCCTACGCGCATACCTAGGTTGTTAATTTGATCAACAAAAT
ATAATTTATATATCACAAAAATTATACCGTTAGAAAATATAACCTCTAAA
GTATCTAATGGTATAATTTTTATACTATATTATTTATATTTTGTTGTTCA
AATTGGCAACCTAGTTATCCGCGCGGGACTTATAATCCCAAACGGAGGGA
GTACAGTACAGCAACGCTAACACATCGAAATAGCATGCTATTTTTCCCTT
GGTCTATACTCATGATGAAAGGAGATATAGTTTGCAACACACACTTCTCG
AAGACAACATCCCTCGTTGCGTAGGCTACCCATAATTTTTTTTTCGAAAT
GGAAAGGCTACCCATAATTAGTACTATATCCATATGACGCATATGTCACA
GAAACCATATTCACTAATAAAACTAAATTAAAAATTATTAGATCATACCA
CTATGTCATATATGGTTTTAATGATATGCCATAATTGCAGTGGTGAGGTT
ATTTCAGTTTTAAAGTTTGTAACACGCAAAAAAAAATAGGGTGTACCCCA
AACTCATATTGCCCTTTGGTTACCTCTAAAAAGGGTGACCATTTTACTAG
TGAATCACAATTTACTTTAGTTTTGTTTGCCCAGAATATTCTTCAACACT
TGGCCGAACATTTTTCACTCGAGAATTTTCCTATCCTATATCGCCCAGTA
AACTAACAGTTATAAAGAAGAACATGAACTCACAACCACTATATTGATTT
TTTTTTAATATGTACAACTTGGATGCAGAATGCTCAGCAGAGAAGGATGA
GGCCCCTGATAGAAGCAGCCATCATTGACTTATGTGCCAGTACCAGCACC
TTGTTGCCTAGAAATATGGTGATCGCGGACTTGGGTTGCTCCTCTGGTCC
AAATGCGCTAGTGCTGGTATCGATTGCCATCGAGGCCATCAACAGTTACT
GCATTCAGTTCCAAAGGAAACCACCTGAAGTGTGTATATTCCTCAATGAC
CTTCCTAACAATGATTTCAACACGGTGGTAAAAAGCTTGGTCACACTCCG
GAAAAGTAATGAGCCTATTGTTGTGGCCAATGTCACACCAGGGTCATTTT
ACGAGAGACTCTTCGCTAGTGGCTCATTGCATCTTGTTTGCTCGTCCAGC
AGCCTGCATTGGCTCTCAAAGGTGTGGCATTTTCACTACTCGAATAGACC
TTTTGCATCGCTTGTTAATTATGTGGTTGAAACCTTTATTTTACAGGCTC
CCGAAATACTAAGGAGGGGCCATATCCCGGCGTACAACACTGATGAGCAT
GCTAGACACGAAATGCTTCCTATGATCCTTGTGGCTTATGCACAACAGTT
CAAGAATGATTTCACATGTTTCCTAAACCTACGTGCCAAAGAATTGCTCC
CAGGAGGCCAGATGGTTATTTCCATTACAGGAAGGCATTCTAATGGAATT
GCCTCCAAATTATTTCACATATGGGAACCCATAGTTCAGATTCTCAGTGT
TATGGCCTTAGAGGTATATTTTCTTGCCATCTTGCATATGCTATCATTTG
CTAATGAAAGCGCAAGTAACTGATCTTTTGGGTATGATTAACAGGGTGTG
ATCGACAAAAGTAAGTTTGATTCTTTCTACATGCCGATGTATGGACCTTC
CAGTGAAGAGATTAGGGAGATCATCCAAGAAGAGGGATCCTTTTTTATCA
AGGAGATGGTAGTGCATGACTACACAAGTGACGAGGACTCTGCCCTCGTA
ACTCCAAATAGGTTCATGCACCAGATGAGAGCTGTTTTTGAGCCAATAAT
TGTGCAACATTTTGGAGAAGTGATGGAAGAATTCATGAGAACCGCAGAGA
GGCGATGGAGCCTTGACGGGATCTTGAGGGATCAACTTGCTAGACTAGCA
TGGCTGTCCGTATCGCTCACCAAGGCATGATCAAGTAACTAGCTAGTGTC
ATGTGTGACTTGCTACTGTCATGATCATATCCACCATTGATAACCAGGGC
ATATTTATGACAAGAAGTAATGTATATGTATTTAATTATGTACTACAGTA
TACTGCGGCATGCACGTGTGATTAAATGTTTTCATGGAAGCACGTACAAA
TTTATACTAGGTGAGATTACTAAAATGATCAAAAAAAAATCTTAAGTACT
ATAAGAAAACATACGAATTTATGTTAGCAGGACATGAATCATTGAAAATG
ACTTTTTCAATGAGGAGGAGGAAGAATGTGAAAATTGTGCCGGAGATGCG
GCTGATGCCGCCGCCACCACCTGCAGCGCTGTTGATTTGGAGGAGACGGG
TGCCGGAGCTGGTGAAGATTAGATCTCGGTGTCGTGAGCCATGTAGAATG
AGGTAATATTGGTCACCATTTATGGGGTTTGGTTCAGGTGCCGCAACAGA
TGAAAACCATGAATAATTTGCTGCGAAGCAATGATGCCCCTTTCTTGGAT
AGATGTGCTAACCGGATTTTCAGAATAATTGCACATCATTATTCTCCTCT
GGTTGGTTATTTCTTGTGAAATGGGGTTTTAAGGAAAAAATGGAAGTTTC
CGAGTATGATCATTCATTCTACTGCTGTCGTTGTTCTCCTCTCCAAAAAA
TATGAAAACTACTAGACATGTGCTTTACTGAACTAGTAGCAATTCTGCAC
AAGGTTTTCTTCCAGCAGATTTCTGCACAAGATTACGGACAGACTGACTG
ACCAACCAACAGATAAACACATGGTTTCGTTTCACGCAGAGTTCAGAGAA
GGCCAAAACAGCTCAAGATTTTTGGCTGGTTGCTTGGATGTGCTAACTGA
ATTTTTAGGATCAGCTTAAGCGTTTCATTTCACGCGAGAAAGAAAAGACA
GCTTCAGAATTTAGCAGTATACTGGAGTACAAGAGGATCGCCATCAACAG
CCTAGGACAACACGTGTTCCTCCACCTCCAAGTCTTTGTACTGCTTGATT
GGTCAGTAGCCACGGTTTTCACGCTCATCTTGAACCACGTGGTGCTTGAT
TCATTCAGAATCCTCATCCACATGTTTTCCGAGTAGATCTCCTTTTTTGC
TTGGGCAAATGCTATTTTTGCAATTCAAAGGCCGTGTGAATAGACTGTTA
CATGCTATTTTTAGGCCTAGAAAACTGCCATATGCAGTCAGCATAAAAGG
AGGAGAATGGAGCTTCCGATCTATCCCTCACAGGTTGAAGGACTTCTGGA
TCTGGATTCTGGAGGTTCACGCTGCTGTTAGCGAATATAGATGGAGCACA
TGAACCATGGAGAAGGGGATACCAGCTATGCTCGCAACTCCAGTATTCAG
GTATTTACTCCTATAAGCTACTTTATTACTATTATTTATTTACTGCTGTG
GCTACCAACTGGACAAAGGTTGCGCCTGTTGTTTTCTCTTTTTCCTTTTG
GTTTCTCTAGTCTCAATGTTTTCCTAGAAAATTAAATAAGTGTGTTCTTA
ACTCCAAAAATGTGTCGAGACAACATCATTTGATGTTGTGAGTGATAGCG
GATACGCTGGGTCACCGGGCACGTCTATACCAAGGAAAAAATAGTGCGCT
GTTTACAGGGCCGGCTCTATGTTTTTCAGGGCCCTAGTCAAAGTCGACGG
CATGGGCCCTTAAGGCTAACGTATATAGAGACATATTAAACAAATTTATC
ATATATGTATCTACTGACACTTTTAAAATAAAAGTTAACATATAACCAAA
CATTTTATTTTCAAAATATAATAAATAGTATTTGTTGCTGGTTTGATTAC
CTCAAATAAGAAATAATTCCAATGATAATAAGTCAGGAGTGAGGATCAGA
GCCTGCCGCTGGTGAATTGGTGATCTCCGATAGACGATAGATGACCTGCG
AATCTGCGTTCATCGATCGAGTCAGGGAGGTAGGGCCCTAGAGATCGAGG
CACGGGGTCCGGCCGATTTCCGAATAGTCGAGGAGAAGAGAAGATAAGGG
AGATCATAAGTTCGCGACGCATTGTAACCCATGCGGCCAGCGTCGTAACG
CGTTGTAACTCATAAGCCTGGTGATTCGTGTCGTAGTGAGTCTTTTTGAT
TTCCTTCTCGACGTGTTGTGTCTGGTTTTCAGGGCCCTACTCGTTTCTCG
CGTCGTGGGCACCAGATGTATACCCGTATATAAGTGTATTTCTAGCGTTT
AGCAAGTTAAAGTTTATTAAATTTGACCAACTTTATAGATAATATAGTAA
CATATTTTACCCCCTCCGACCCATATTAGTTGACTCAACTTTGTCTAAGT
TTGGATGAATCTAGACACTATTTAGTATATAGGTTCATCCAAATTTTAAT
AAATCCAAGTCAACTAATATGGATCGGAGAGAGTACATCAGATTAACATA
TCATGAAACTAAATTTTAAAACACATCTATTGGTAATAATTTAGAATCAT
AAGTATCACTACATTTTTCTATAAAAAATTGTCAAACGTTGTTAACTTTG
ACTTAGAATAAAATTAGAAATACATTTATTTACATATACAAAGGAAGTAC
ATGATACAAATTTTTGGGCCCCCTCCGGCCGTGGGCCCCTGGCCAATGCC
AGGGTGGCGACCCCTCAGCGCCGGCCCTGGCTGTTTAATATAGTATGGCC
CTTCTCCAAACCCTATAGAAGTTATAGCATGCTATTTTACAAAATAGCAT
TTTGCAAAAACAAACAAACAAGTATAGCATGTATACTAAGGATTTCAGCC
AGCTAAAAAATTGTCCAGAGCAATACGTATACATGTATAACCAATTAACC
AGTGGTGGCCAAATGATAGTCCGGATAACAATGATCTCACAACAACACTG
TCTGCATCTACTGTTGATGTTGTGCTTGACACGCCAACGGCTACAATCAG
ACAATCATACAACATGAAACATCAATACAACAGTACAATAGTTCAACTAC
TGTTAAATGGCTAGACAATAAGAAACATATACGTGCGGCAGTACAACAGG
ACAACAGTTCAGTACAAATCATGCCCATAACTGAACTGAACTATGAACTA
ATATGCAGCAAAAGATGCAGGACGAAGACAAGAACTACATAACCGAGCTG
AACTAAGAACTACAGAGCTGAACTGAACTAAGTCCTAATGTTTCTCAAAT
CAAACCTGCTCAAATTTACAAAAAGGTGAGGCAACGGATACAGTGCAGAA
CTACATATATGTATGAATCAACGAAATGCAACCAATATCATGAGATGAGA
TGAAAATTATTAGTACATCCAAATCATAAAGGGCCATAGCAAGCAGATTA
TGCATAAAGTAGTGTTCACCTTCCAAATACACTATAGCGACGCTAACATG
TCGAAATAGCGTGCTATTTTTTCCCTTGGTTTATACTCATGATGAAAGGA
GAAATAGTTTGTGACACACACTTCTCGAAGACAACATGCCTGGATACGTC
GGCTACCCATAATTGGTATTATAAATATGACACATATGTCACAGAAACCA
TATTCACTAATAAAACTAAATTAAAAATTATTAAATCATACCACCATGTC
ATATATGGTTTTAATGATATGCCATAATTGCAGAGGTGAGGTTATTTCAG
TTTGAAAGTTTGTCACACACACAAAAACAGGGTGCACCCCAAACTCATAT
TGCCCTTTGGTTGTCTCTAAAAAGGCTGACCTTTTTACTAGTGAATCACA
ATTTACTTTAGTGTTGTTTGTGAGTTCATGTTCTTCACTTTGGTTACCTC
TAAAAAGGCTGACCTTTTTATAAATGTTAGTTCATGTTCTCCAAACTAAC
ATTTATAAATAAGAACATGAACTCACAAACACTATACTGATTTTCTTAGT
ATCTACAATTTGAATGCAGAATGCTCAGCAGAGCAGGATGAGGCCCTTGA
TAGAAGCGGCCATCATTGACTTATGTGCCGGTACCAGCACCTTGTTCCCC
AGAAATGTGGTGATCGCGGACTTGGGTTGCTCCTCTGGCTCAAACGCGCT
AGTGCTGGTATCGATTGCCATCGAGGCCATCCACAGTTACTGCATTCAGT
TCCAAAGGCAACCACCTGAAGTGTGTATATTCCTCAATGACCTTCCTAAC
AACGATTTCAACACGGTGGTAAAAAGCTTGGTCACGCTCCGGAAAAGTAA
TGAGCCTGTTGTTGTGGCCAATGTCACACCAGGGTCATTTTACGAGAGAC
TCTTCGCTAGTGGCTCATTGCATCTTGTTTGCTCGTCCAGCAGCCTGCAT
TGGCTCTCAAAGGTGTGGCATTTTCACTACTCGATGCATCGACCAGTTGC
ATCGCTTGTTAATTATGTAGCTGAAACCTTTATTTTACAGGCTCCCGAAA
TACTAAGGAGGGACCATATCCCGGCGTACAACATTGATGAGCATGCTAAA
CGCGAAATGCTTCCTATGATCCTTGAGGCTTATGCACAACAGTTCAAGAA
TGATTTCACATGTTTCCTAAACCTAAGAGCCAAAGAATTGCTCCCAGGAG
GGCAGATGGTTATTTCCCTTACAGGAAGGCATTCTAATGGAATTGCCTCC
AAATTATTTCACATATGGGAACCCATAGTTCAGATTCTAAGTGTTATGGC
CTTAGAGGTATATTCTCTTGCCATCTTGCGTATGCTTTTATCATTTGCTA
ATGAAAGCGTAAGTAATTGATCTTTTGGGTATGATTAACAGGGTGTGATC
GACAAAAGTAAGTTTGATTCTTTCTACATACCGATGTATGGACCTTCCAG
TGAAGAGATTAGGGAGATCATCCAAGAAGAGTGCTCCTTTTTGATCAAGG
AGATTGTAGTGCGTGACTTCACAAGTGAGGAGGACTCTGCGCTCTTAACT
CCAAATAGGTTCATGCACCATATGAGAGCCGTTTTTGAGCCAATAATTGT
GCAACATTTTGGAGAAGTGATGGAAGAATTCATGAGAACCGCAGAGAGGC
AATGGAGCCTTGACGGGATCTTGAGGGATCATCTTGGTAGACTAGCATGG
CTGTCTGTATCGCTCACCAAAGCATGATCAAGTAACTAGCTAGTGTCATG
TGTGACTTGCTACTTTCATGACCATATCCACCATTGATAACCAGGGCATA
TTTATGGCAAGAAGTAATGTACTCCCTCCGTACCGGATTATTAGGCTAAT
AGAGATTTTAGAAAGATACCGATAAATTGAGCTAATTTATGCATTAAATG
TCCAGATTTACTGTCTGTAGTACATAGGAGTATATGTATTTAATTATGTA
GTAGTATACTATAGTCTGCACGTGTGATTGAATGTTTTCATGGAAGCACA
TACAAAGCTATACTAGGTGAGATCGCTAAAATGATCAAAAAATAAAAACT
TATCTCTAAGAAAAACATACAAATTTTTGTTTGCAGGACATGAATCATTG
AAAATAACTTCTTTTATGTAAAAGGGTCAGCTGTCTGCTGGTGAAGGGCT
TGGTTCAGCTCCTGCTGTCCTGCCCTGCAACTGCAACAATTAA

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