Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA040409

[Submit comment/correction]

Sequence	AA040409
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA040409
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AAAAAAAAAGACTTCCATCCGCCGCCACGCCGACGCTCCGAGAGATAGAG CAGTCCCAAATGGCGCCGCCCCTTCTCCTCCTCCTACTCCCTATCCTCGC CGCCGCGGCACCGACCGCCCACCCGGCCCACCCACACGAGCCACCGTCCT GCGCCGCCTTTGAGACCGAGCCGGTGCCGGTGCCGGAGCGGCGGGAGACG CACGGCGGAGGGCGCATCCTGGACATCACCCACTACTACCGGGAGGACAT GCCTTCCTGGGGGTCCGACGACGGGGTGGGCCAGTTCCTGTGGCTTCCCG CCTCCATGCGCAACGGCTCCCTCGCCAACAACTCCGAGATGCGGATGCCC ACCCACACAGGCACCCACGTCGACGCCCCCGGCCACGTCTTCCAGCACTA CTTCGACGCCGGCTTCGACGTCGACAACCTCGACCTCGAACTCCTCAACG GTGGGTGGGTGAGGTCGCTCCCCCGCCCCGCCGCATCTGTTCTATTTCGT GCAGTAGCCACTACAGTACCAGTGAATCGATGGCAATTAGTTTTTGGAAT GCTTCGACTCTCTTGCCAGAACCAGTGAAGGTGAAGCGCAAGCAGGGATT CAGATTCTAATTGTAAATACTACTACTAGTTTGATGTCCACGTATCCAAT CGACATCGGGAATTAAATTTGGGACTGGAATTTTGTCTTCACTTTTGGGA CTAGCTCGACTTGCAAAAGTGAATGGGGCTGCACATTGGACATACCTTTA TTCTGATAGAAAAGGCATTACAGCATACAGTGTGTACATTTGAATCATTA CCGAGGTTACATATTCACTGTATAATATAAATTCAGGCAATTCGTTTGTA TCATTCTAACAGCTGATTTTGCATTATTAGGTCCTGCATTGTTGATCGAT GTTCCAAGGGATGAAAATATTACCGGTAATATTCCTACTGTTCGTTCCCA TGGCTTACTTTGTTATTGTGCCAAAATGCTAGTGGCATTTGCTTAGCCCT AACTATTTGCATGATGTGGGTCATTATATTGGTCATTTGTGGTTGGCTAA GCCATGACACACCTTTTGTGGCCACACCTTGCACAAGTTTTAGGAAAGCA AAGAGTCTATGATAGGTAACCTACGGCCAAGAAAATGGCAAGAGTCTATG ATAGGTGACCTACGGCCAAGTAAATGGGGTAATGAGTCAAACAACCACAA CTGAAAGTCAAACTTTTGTAACTAATGTTTAGCAAAGTTAGTGAACTGAA CTTGCCTTGATATCTATTTAATTAGACTTGAAATCTACATTTTGCGTATT TCGTCGCGACGAAACTACATATTGAATTGATCTATCATTGCAGCTAAAAC AATGGAATCTCTACATATTCCTAAAGGAGTCCAGCGTGTACTTTTTAGAA CGTTAAACACTGACAGGTAATCTCCTTGTTTGTGGTAATCATGCTCACAT ATTTTATATGTGAATATTCTCTCATCATAATCTGTATGAGAGCACATGGA GTTCGTTAACTGCCCCTTATGTACAATTTCGATGTCTATCCTTATCCATC TATGTCTATCTTTCTTCTGCCTAATCATATTTCCTTGGATTATACTATCC CTGAATAGTTTTCTCTACAAAATATCCTGTTATCATGTATTTTAACTATC TATGATGCAATTTCTTAAAGTAAAATACTGCACTAAGTGCTATACTGAAC TGTAGAACGATATTTCATAAATATTGGAAAGTGAATTTAAATGAAACTGT AATCTTGCAGGCAGCTAATGTGGAAGAAAGAGTTTGACACAAGTTATGTG GGATTTATGAAGGATGGTGCCCAATGGTTGGTAGATAATACGGATATTAA GCTTGTTGGTAAGTTCCAACTAACTGTCATTCTCTTAGGAGGTCCTTCAG TGTATCTATTGACGAATATTTTATTTTGTTATATGTGGATTTATGTTATG CTCATGTACATGCCGATTGTTTGGGTCTGATCTGAACAGCAGTTGTTTCT TTTTGCACCTTTAGAAGTATGGGAAAAAGATTGGAAGTATGGGAAAAAGT CCAAAGTACAACTCTAAACGCCTAAGAGCTAGACACCCCTGATCGTAATA TGAAGCTTTTGTGTTTTCTTCTGTCGATGCATCAAAGCATAAAGCTTCTG CATTCTCGAAACAAAAGATTAAAAGTCTGGGGTGTTTTTGCGCACCCAAT CTGCCACACACTATGCACCCTATCATACCATGGCGCCTGGACCATAATTT ATTTGCTCCTTCATCTCAACCCTTTTCTCCTTGTCCTGGAGTTCGAGCAA AACGTGGGGGCGGAGTCACACTATCACATCAATAGGGAGCTATAAAGGAC TTCAACCCTGGCTGCCACCTTGCATCTTGAGGACAAGCTACTTGTCCGGG AGAGGTGTAGTGTTGTGGACGCTAGTACGATGGATGCGGCTGCCCGGATG GCAAGATCAGGTTGGTCGTATTGGAGCAGGAGAAGGCAAGACTCCTTTAG GAAAGTGTAGGATTAGAAAAGAGTCCAATTGTATTAGGAAATTTCTAGAT CTAAGCGTATTAGGAGAGGTCAAGCACCTAAACATCCATTATATAAGGAT GGCATGTATACACGTTTGAGACAAGCAATAAACAATCAATCTAATGCATC CCTTGTTATTCTCTCTTCTCAACCTATGTCTACCCAACCCCTCGCAGCCA GCAACCTATGTCTACCCAACCCCTCGCAGCCACATCTGGTTATCTTCTGC ACGGTAGTTATCCCGTTGTGGATCTAAGTCCACAACAGTTTGGCTTTGTT ATTGTGTAGTTATCCTCATTGGAAGTGATGCAACTGAATAATATTGAGAG TATGGGAGCTAGAATCTACAATCTTTAATAATATGTGGCGTTGTTATGTT TTGAAATTTTGCCTTAGATTGGGGTATTTTCTCGAGTTCTTTCACTTGGT TTTGTATTTACGGGCAATACAAACTCCTCCACAGTTCTTTGATAGTACAT TGGACAGCCTAAATAATTTGTCCCACAGTTCACAGGTACTCTTCTTTTTA TACTTATCTCTTCTCTTGTATTGTTGGAAAAATATTTATTCCAATCTTGT GTTTGTCATGTTTCTGCAGGAATAGACTATTTGTCCGTTGCAGCTTTTGA TGACTTGATCCCTTCACATTTAGTTCTTCTCAAAAGCCGGGTATGAAGAT ACTTCTTCGAGTAATTTTGTTTAGTTCACATTTACTTGACACTTTGCATT ATTTTTTCTATTTTCTTGTTCTACTTTCTATTTTTGCCCTGTATCTAGAA CTTTATTTTCCTTGTGTTTTCTGTAATCTGAACGTACTGCCTCCGATAGT AATTTTATAAGGATCTGGTGTTCATGCAGTAAAATAAATAAAGAAGTTTT AATCGTGTAGGATAATCCACACTTTTAGAGAAGCACTGTTGCAAATCGTC AGTGTCATGTCTGCTTATCAGATTGTCACATCAGAACAATCATTCAGTTG CCGTGCCATGTGTCCTCTAAGGCACTAAACCTCGTTCTTTGCTACCATAT TTGTACGATCTGCCATCCCAAACAAGGAGGCGACCCAGCGCACAAGCAAA ACATGAGTGAAGCCTGTGAAAAGTAGGCCCCAACAAGTGGGGAAGGACAC ATGCCCCCTTGTAGATTCGTACTAGGAAACTGAGGCGCGGCAACACGCCG CGCCCATGGAGAAAAATCAAAACCAAGATAAAAAAACAAAAAAGTGGTAC AGGATAAATCCTCTTAACCTCAATTGACAATAAGATGTTGCGGTTCAGAT TAAAAATATCATGGATTACATTAGAACATACCAATAGCAGGTTTAAAAAC TGAAACATGATCTTGCTTTACACAACGAATGCATTGGATTATTACATGTG GCAACATTCATAGAGATCTGATCTCTAGAGATTTTTTTTTTTGAAAAGGC TACACATCATATCCATTACGGGATACGTGCAGAATCTGTGATCTGATCAT ATTAAACAATGACACTAAAAAATTAGAGCAAAATACTTAATACTTGCAAA ATCTGTAAATGAATAGTGAAAACTATATAAAAATGTTCTCCTCAGATGAT TAAAGAAATAGAGCCTCATCAATCTGGAAATATCTAACACTACAAAAACC ATCTACTCAGATAGGTTTAACAATTACTACAGAAATCAAATTGGAGCAAC TTCATCTACTTACCATCGATTATATAGTTTTGTTCAGTTGTACTCATGTG GGAGCGTTTTGGACAGATACCTATTCTTACCTGACTCAGCGGTCGATCCC TGTTTTTCCATCTTATTTCTTGCTGTTGTGGAGCTAGGGACTGTCTTCTT CCAACAGTCCATGCAAGACATGTAGCACCAATCATCGGGACTTTTAACTT CTGTGATGATTAGCTTCAGTTTACAACTGTTGCCCTGCATGTAATTGATG TGTTAGCTTTGCTGGAGGGTCACAGTCATTAATGAATACTGGAAGTGATG TAGAATAACTTACCAAAAGTGATTCAGTTGGCTCCTTAGTAATAGCATGG AGAGTTGTTTCAGTTGGTTCATCTCTTATATTTCCTGATCCCTTCTGATA TATCATGTGTGGGTGATCCTGAATGCTGAGACAATTATATACCCAATAAA AAGTAACCATTTTTATTAGTGTTGGCCGCCCAAATGCATGTACATCTGAA AGTTTGAATACCTTAATAACATTGAGCAGTGGGATATGTAAACAACATGC GGTTAAGAAAAATAGAAAGCTCACTAAATCGGTACCATGAAAAGGGAAGC AAAGATCTGACCATTATGTACCCTGCTACAAATAATTTTTAATAATAATG GTACCAAAGTAAATTGCAAGAAAGGTAAATTAATGTTCGAGCAATGTGTA GGTTACAAAGCTAGAGATGCTGATGGGTGAGTAATTGTGAGGTTGTGACA ATTCTTTATCTGTAATACTGAAAGGTAAGTACCATGCACCGAAGGGAAAC TAAATAAGCCGAGGCAATGTAGTATGTTTATTAAAGGCAAGAATAATTTC AATGTCAAAAATTGCAGAAGGTCACCTGGCGGTCTCAACAAAGAACCCTA GCACATATAAGTTTTCTGAACGCTCAGAAGAAGTTAACACGATGGGAATC CCAAATTCAGCTGCAATGAAATAGATAGTGTTCGACTCTCGTGCTCCTGG ATAAGACATTCATACTACAAATACATGAGAAAGATTCATCCATTATAATC CAATGAATGATTATAATAACACGGTTATCAAAAAAATTATTGAAAGTTGA ATTTCATGCATTTCCAAATCATGCATCAATAGAATCCTCATGAGAATTTA CCATTAGAATAGAAATATTAGTGTACTGAACACTAAGAGTGAAGTAAACA TTGGCACTACATCACTTAGAAAAACCTTGGAAGTGATGCCAAATAACAGT CAAAATCAGAGTACAAACTAAGAAATATAAACTGCAGTAGGATTTGGCAG CCCTCGTCTTGTAAAGCAAGAAGCCTTTGGTGAAACTTGGGTACATAGCA TCATGGGTGTCTCCTCACAGCCCTCAAGCCCTACTTCAAAACTTGGGTAG ATAAATTTGATTGCAAAGCAAAAAGATAAATCTCTGAGAAAACTTGGATG TACTGCAAGTGTATCTTCAGTAATAACATAAAGTGATAATTGATTGTACT TATTGTCTGAATCAAACAGTGGACTAAAATAAGATATTTGGCTGTTGCAC GATGATATCTCCCCTTGGCACAATATATAACATTTTGCTTCTCAATCTCT ATCTTTTATAAGGATGACCATGGGGATGCACTACTTACTTTAGTACCGCA GAATCCAATGATCTTGGAGATAAATAGGCTCACCCCTATAAAAAGATAGA ACACAATTTCCTGCAAATGTTGGAAACACACAAAATGATGGCAATCTACG GTACATAAGAAAACACTCAACCAAGTAAGAAATGAAGTAGCATCCAGACG TTTTAGACAGCAGATGCAATTATGGACGACAATTTCTCATAGAGGCATAT TAAAGCGAAGAAGCCTCCTATCTCAAGGTCCAGCTTTAGTAACCCTCCTG TCACCTCATCGCTCTATACACCTGCAGTTTAGTAAAGCTCATATGAGCCC AGCTCACTAATAATGAAACTCCAATTTAAACTGTTTTGTGTAAACGCAAT GCTGCAGCGTGCTCAACAGAAAAGAGGCACTCCTAGGATATCAGTCAGCA ATTCAGGAATAATTCTACTCCTAAGTTAAATCAAAATGATAGTTACCATT GACCCATACCTAGAATGAAGCACCGAGAAGCCAGGAAAACCTGCTCCGTG TCTATAACCCGCTAGTTCGTCGATCAAGGGGAAAATGACCAAAACTTGAC AAACGGGCGGAGGTGGCTCCCAGCGTTAGGCACAACCTGACCCTCGGACA GCAGCGACACGAACTCCCAGCAAAAGGGCCACATAAAGATGGCGCCGTCG TTGTCGACTGGAGCCCGTGTCGGCTCCCCTGGGTCCTCGCCGCCTGACGC CCCCGCCGATTGAGAGCCAGGTGGCCATCGCCACCTGCCTTCACCGCGTC GTGCTCGACCTCCCGCGCCACCATCCGCCTTGCCCTCGCCGCCGAGGTTG GAACCGCTGTCATCACGACGACTCCACCACCTACCGTTGGCTTTGGCCGA ACCGTGGGCGGCCGCTCGACACAAAGTTCGCGACAGGGGACGCACGCTGC CGTCCAAGAAGGGGACGCACGCTGGGTGCCGAGGGCACCAGGCCGGCAGC GAGCGATTTTTCTCCGGCACGGGGCTGGGAAGAGGGAGGACTCGGGCGGG GAATATAGCATGGTTGGCAGCGGCTTGAGAACGGAGAGATCCTATCCTTA ACGGCACGGCCGCACCATCCTCGCCCCTCCTCACACAGCTTTCAGAGGCA TTGTCGTGTGAGGTGGCCATGGGGAGGGGCGGGAGCGAGGCCAGTGGATC GGGTAGTCGGCGGCTCGAGGAAGGGAGAGTCCGGCGGCCATGGGGCAGCG GGTTTGGGCAGAGAAGGAGCCGAGGCGTGGAGGCCGGGAAAGAGATGGAG GGCACGAGAAGAATCTGGAGACTCCTGCCCTCTTCTGAAGAAAAAAATAA TGAAAAAAAAAGCAGCAGAAAAACGAACGCGGAAAAAAAGTCTAATGGTA CCGTAGATGCGCCATCTACAGTACCCAGCGCTGATTTGGCTCTTTTAATC GATAGCTGAAGTGCTTGGCTTTTATATAGTTAGTGATATGTTAGGGCAGT GTTCATCTTCTCTCCCGTCAGTGCATTAAGCCTGTTAATATATTCCTGGT TGAGCTTTCAAACTTTTTGTTTAATGGCATATTTATTCCCTCTACTTCCC GCTAGCTAACTTTGTTCTGAAAAATTTATAAAAGGCCAGTTAGAATGTTT CTACTAATGTTCTTTCATATGGCGTATTACTTCATGTTAGGTCATTGGTA CTAGGCTACTAGCTCCGTACAGTTGACTTCACTGAATAAACCACCATATA TCTAATTTTTTTTCCTGCTCTGTGATTCCGTTCAGGACATCATTCTTGTC GAGGGTCTCAAACTGGAGAATGTCAAGCCTGGGCTATACTCATTGCATTG TCTGCCACTTCGGTTGCGTGGAGCCGAAGGTTCACCGATCAGATGCATCC TTATAAAGTGAAATTAAAACATTGTTATGTCTCTGGCCATATTTTAGTTT AGTGAAATGCAAGCAATTTGCCTTCTCGCTTGAAAAAAAAAATGCGAATA TCTAGTCAATATCTGTTGGTTCCTTATGTTACAGTATGCTAAATGCTGAG CACGTTCAATTACTGTCATCATGTACATATCCTGTGATATCTTGTACCGG TGAATGAGATCAACAAGCCATTATATTTGTTAAATGCGAGACTTATGCTG TTCAAGCCATATTAATGTTTCTCCTTATGTATAACTCTTTGATTACAACA AACAAATATTGTGCGCCAAATACAATTTTAGTTTGAACGATGGAAGCGTG TCGTTCAGGATTTCTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.