Query (optional)   in Class  

GrainGenes Sequence Report: AA028717

[Submit comment/correction]

Sequence
AA028717
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA028717
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GGACAACACTGTACACTGTGGAGTGTAGTGTGAACCGGACTGCACTTCTC
GCCTGACGCGACCAGACCAGCTTCGGCGCCGGCGGCCGGCCGACCAGTGC
CACCCCACCGATTCCATCCATGGACGGCGGCGGAGCGGGGGCTGCACGCG
CGGATGGCGACTGGCTGCATGTCTACGGCCGGGTCGTCGCGATGCTGCTG
CCGCGGGTGGATGCACTCGCCGCCGGCCGCGCGCGGCTGGAGGCCGTCAA
CGCGCTGCAGCACGAGTTCTGGGAGGCCCGCGACGCCCTCCTCCAGCACC
GCCTCCTCCAGGTGACCCATCCGTCCAATCCCCAGTTCTTTTCCTAGCTA
GGGTTTCCCTTTCCTCTCTTTGGCTCCTCACTGACGCTGCCTGCTCTGAA
CTGCCAATGGCAGGCGGAGGAGAGCAGGGGGAGGTGGGAGGCGGCCTACA
TCGACCTGCAGCCCCCCGGGGATGATCCGAAGTTCACCGGTAAGGAATTC
AATCCCGCAGCTGCTACTTTCCTCTGCTAGGCGCCGTCACTGTTGTTCTA
TTCAGGTTTTCGGTTCCTGCTAAAATCTGGAAAAAAAAATTGGTGAATAC
GAACGAAATGCTCAGTTGTGAAATAATCTTCTAGATTTTAGCTTTTACTG
CTAGCTGTGCAAAATGCTGCATCTTTATGTGGGAAGCTCAGTGCTTGGTG
TGAAATATCTGCACATTTAGGAACCAACATATCTTTTATAGTACTCAACG
AATTTGTGGGAAGGGGGATTTGGGGCACAAGCTCCTGCTATGTTCTGCTT
TCTTATGATGAGGTGTATGTCTTAATGTAATTACCCTCCCCTGACTAGCG
AGGTTAGGTTGTCTCGTTTTAAGTACTACTACTTTGTTGTTCCTACAGGG
GGAATTTTGTGGAGGTTTATGTCCTCATGTGACAGTTTTGTTTGAATTAG
AACCTAACGAATTGGGTTGTGCTCCTGCATGTTACTTTCTACTTTTTTTC
CACTCTGGTTACTTAAATGATCATTTCGTAATTGTGTGATCTTGTTCTTA
GTTATTCACTGGCTGCCACAAGATTCTGTGGACCAGGCAGCCAAATGAAA
CCTGTAACTAGTTAAATCAATATTATTTTTTTAACTGACCACCCAGTCTT
TATGAAATTTTGTTGCTACTGATATCGTTGTATGCTCCTTTCGATGCAGA
GCTTCAAGTGAGTGACTTGGAGGACTTAACAACTTTTGTAGATGTTTTGG
CAGCAGAAAACACGGAATTTCAGGTACGTACTGAAACATAAGTTGCATGG
CAGGAAAAGCATGAAACTCATATTGTGCATCTCGTTAGTTTTATTAATCA
GGGTTTTGTGAACTTGCTTGCTTCTTATAATGTTAGATAAAAGCGGGGGA
AGTTGATGCTGGTGCAGAGAATAGTCAAAATGCTGCAGGCCATGGCATCA
CGAGAGATTTGGAAGCAGAGCTACGGAATTTGAAGCAGGCTTATGAAGCC
GTTTGCTCAGAGAAGGATAAGGAAGTTTGTGCATTAAAGCAGAATATAGA
ACAGCTGCAGGTAGCGTCTCAAAAGAAGGATGGTGAGATTCACAGACTGC
GAACACGAGCAAAAGCAGCTGAGGCCAAAAGGAGATTGGTTCAGGGTAAG
CTACAAAACATGTGCTCTCTGACCAAGGAGATAGGTGGAGTAATTGAAAT
GTGCAAAGATCGGCAGCGTGAGACGAGTCAAACGCGCAAGAAAGATATGA
GTGAGACGCAGAAAAAAGGTTGTTCTGAAGGTCCTGCTGTAAGGGTGGAA
ACAAAAAATGATTCTTCTAAGCAAATGCTAGCAAAAGGAGGTCAACCTGA
GGCTATCCAGAAACGCAGGTGTCTCGCTTTCTTGTTGGATGTAAGTACTT
CATTTCCTCACACTAAGTCTTGCCATACATGTATGGTCAATGGACAATGT
TGTGCCTATTAAGTAAAGCTGCTTGATCAAATTACTATTATCGAAAGTCA
CAGATTGCGTGTTAATTAGTTTATCATGTCATGTTGTTTGATCAATAGCT
GTTTTACTAATATGCAGACAAATAGACTGGTTTTACTTTGTAGAGCAGGA
ACGTTATTTTCTTTGTGTCTCATTTGTTTGGTGATGTTGTCTTGCCATAC
GTATAGCCAATGGACAATGTTGTGTTTATTAAGTAAACCTGCGTGATCAA
TTATAACTTGTAACTTTGTAACATTAATCAAATTTTTTTTTATCCAAAGA
CACTTCTTGCAAGTTAGTCGCTTGCCAAGAATCGTGTTTTCGTATATGCC
ACTGTATTTTTTTCTCAAGATATAAGCATCCAAATTTATGATAGGGTGCA
CGCATGAGATATGTTGCTGTAAAGTGGAAACACAGTCTTAGAATAAAGTG
AGGAATTTGGTTTGCTTTCTATGATATTTGATATCACTAGGTCCAGTAGG
AATGCGCTCGGGGCAGTGTTCAGTAGAATAGGTTATATTTTTAAAAGGTG
ATGCCGTGATGGTCGAGAGCAGAGGAAGGATATCAATGAGGCACATAAAA
AAATCTACGTCTGAAGTGTTTTTATGGAGATCTCCAGGATTTTCTCACGA
AAATTGGGCTGGTCTTGATTTCCCATTTATCTATATTTCTCTCATTCTCA
TTCTCATTCTCTGAAAAGCTTTTTTTTGGATCGCCATTTCATTGGTCTAA
TAAGGTTTTGGTTTCAGTGGGCTTATCAATTTACTGAGTTTATAGCATAA
AACTACCAGTTTACTACCTAAATTTACCGTATCATACCACTTTATGTTTT
CGGAACACAAAACTACCAGATTTTGGTCCGTTCTTTGCAATTCGATCTAA
ACCGCGTTTGAGAGCGTTTTGACACTGTTTCTGACCAGCCGACCCCACCT
GTCGGTATGACGTGGACAACGCCCGCTCACGGCCGTTAACGGTCGTTAAC
TCGTTGTCTGAATTTAGGGTTCAGTTCCCTGTCGTCCTGAACCAGTCCCT
CGTGCTCTGCCTCTCCCTGTCGTCCTGAACCACTCCCCGGCGATGGCGGC
AGTGAATCCTGACGGCGACGCACATGACCCCGGCGACGGTGACTGCTTGG
ATTCAATTACTGACGGCTCCTCCAGTTCTCCTCCTCGTCCCGACAAGTCG
GTGGCGGTGACACCGCTGGCCTCGCCGGATCACAGAGCGGCGGCTGCCTT
CTCCAAGGCCGTCCTCGCATCGCCGGCGTCGAAGAGCCACCGGTGGGGAT
CATCTATTGGCAGTATTGAGTAAGTATTCCTTTCTCTCTGCCCCATACTC
TCTGCTCCCTGTAAATTTTCTTGTCCTAGCTAGATCTGAATTATAGGTGG
TTAATCTAGTAGTGCATAATACCAGTTTATTTTATGTGTAGTTTGGATGA
TGAAATTTGGGAGGTTAGGTTCAATTTTCCTGGGGAGGATAATCTAGAAA
GAACAGTAAGCAGGTCAGATATAACTGTACTGAACCTGTATGCACTGATA
GAAGGCCATGGGTTTGGTATTAGAGATAACATTTATTATGTTAGAGAAGA
AGGAAAAGGCAAGGAAGGGATGGAGGTAGTAGACAACATGGCAAAGGTTG
ACCAGATGCTTGAACAATATGAGAATGAGCAGGTTCTTAAGCTCACAGTA
ATCAAGGATAAATGTGCATGGCCAGTTGGACTGAACAGTGCAGAAGTACA
ACCTCCTTCTCAAATTGAAGAACCAATTTTGTTCTCAGTGGACACTGATG
GAGTGACCTACATTTCAGAAGAAAATCTTGGAGAGGAAGAAACTTTTTTT
CCTATGGCTGTTGACTTCTCTGATGTGTTATATCTTGGAACACAGCAGAG
CTGCAACATGAAGAAGGGAAAGGAAGTAATTCCATATGAGGAGAATTCTT
CTGATGAACTGGAGAACATACAGGACATACAAGATTTGATGAATAAGAAG
AAGGAAAAGGAGGGAACACATGATGATCCAGAGAGACTTGCAGTACTAGA
GAAGTTGAAGCAATTGAAGAAGCAAAGAGAGGATCCTTTTATGCACATAG
AAGGAGACATAGAAGTGGAGGAGATATTCTCAGAAGATGAAGAATCAGAG
GCAGAGCCAGTTTCTGAACCATTGCTGAAGAGAAAGGCAATCAGGCCAGG
GCCAACTAGCAGCTCACACCATGAGCCTTTAGTTGAAGAAATGTATTATT
TCATGCCTTCAGCAGATGAGGACAGCAGCCCTGGTGATATAGGAGATAGT
GATGATGATGGTTTTGTGAAGAAATTTAAGCTAGCCACTGGTAGTAAGAG
AAAGCTGAAGAAGCCAAAGAAAAGAGTTTGGTATGATGAGACAAGGGCTG
ACCCACATGAACAATTTGCATTGAAGCTGTGCTTCAAGGATGTTTACCAA
TTCAGGAGGGCTCTTAGGACTTATCACATAGCCTAACTAAGAATTTTAAG
TACTGGAGAAATGACAGTGAGAGGATTATAGTCCATTGCAGTGAGAGGGA
CACAACTGGTTGCCCATTCTACTTGACAGACTCATATATTGCCCATGAGA
AAACATTTTGCATTAGAAAAATGAGAGGAATGCACACTTGTATTGCCCAT
GGTGAGAACACTAAAGTCACTATTGATTGGGTTGCTAAGCAATCTGAGCA
GGCAATGAGGATTGACCCCAACACATGTGTTGATACTTTAATAGATAATG
CTAAGCTAAAGTTTGGAGTAGAAATTCCTAGATCTAAATCCTATAGGGCA
AGAAAGAAGGCATTTGCAGTGGTCATGGGTGATCAAAAGGCCCAGTATAC
TAGGATCAGAGATTATCTGCAGGCTGTCATTGACAGTAATCCAGGGAGCA
GGTGCATTGTGACTACTAGGCAACTAGTAGAGCACCCAAGCAGCAATCCA
AGGTTCCATGGTTTATTTGTGTGCCTCAATGCTTCAAAGGAGGGCTTCCT
AAATGGATGCAGACCATTCATAGGGCTAGATGGATGTTTTATCAAGTTGA
CCACTGGGCAACAGATACTTGCTGCAACTGGGAGAGATGGAAACAACATC
TTTCCCATTGCCTTTGGTGTTGTTGACAAGGAGGATTATGCTAGTTGGAC
TTGGTTTCTCACTGAGTTGAGGTATTGCATTGGGGAGTCAGGGCAGTTTG
GCCATTACACTATCATTTCTGACAGACAAAAGGTAAATGTCCATTATACT
AGACTTTCTATGAATTACTATCTTAGTCACATATCATTCTTTTGCTATAT
ATGGATACTAACTTGTACAATTCTCTTGCAAAATGCTAATCAGGGACTAC
TCAAAGCAATTACCAGAGTGTTTCCACATTCGCCTCAAAGATTCTGTCTG
AGGCACATATATGCTAATTTCCAGGCAGCTGGCTTTAGAGGACCAGAATT
GAAGAAAATAATGTTTGCTGCCAGTTACTCTTACACCAAAAATGGTTTTG
AGCTTGCAATGGAAACTCTGAAGGCAGAATGTGAGGATGGATATAATTGG
ATGATGCAAATTCCTGTTGAAACTTGGGCCAGGTATGCCTTTGACACTAA
CTGCAAGACAGATTTGGTAGTTAATAATCTCAGTGAAGTGTTCAACAAAA
TGATTCTAGATGTTAGGAACAAGCCTATTCAAACAATGCTAGAAGGAATT
AGGAATAAGATCATGGTAAAGAATAGTGGAATAAGATCTAAGGTTGGCAA
CACAAGGTGGGAGATCACACCTCACTATTCTGAGAAACTAGAAGAGGAAA
AGAAGTTTTCTAGGCACTGCAATGCTAAGAATTCAGATGTTGGACTGTGG
CAAGTTTCTAGTTCAAAGAGAAACTTGACAGTTAACTTGATAGCACAGAC
ATGTTCTTGTAGAAAATGGGATGTGACAGGCATTCCTTGCAGCCATGTTG
TGTCTGCAATCATGAAAGTGAAGCAGCACCCAGAAGATTATGTAAATGGC
TTTTTCAAAAAACCAATGTACAAGCTAGCATACTCTGGTGTAGTCTACCA
TGTTCCTGGCCCAGAAGATTGGACAAAAACAGATACACAGGACATAGAAC
CTCCTGTTTTCAGGGAAAAGCCTGGGAGAAAGCAAACAGTTAGGAGGAAG
AGTGCATTTGAGGTTCCAGGTCCTAGAGACAGTTCTAGGATGGGTACTAT
CACTTGTAGTAACTGTAAAGCTGTAGGGCATAGGTACACCTCCTGCCATG
TTGCCTTGAGGCCTGAGCTACAGATAAGGAAAGAGCAACACAAGGTACAC
CTTCTGCCTTTTTGCATTGCATTGATGCCTAATATTATTTTCTGCTGAGC
CTAAATTATGCAACCATGACATATGCAGGCTAACAGACATGACTATGGTG
AGGAAGGCTCTGGAACTACACCTACAACAGCACCAAGAGCATCAGTTGGG
CCTTCTGCACCAAATCCTCCTGCAGCACCAAGAACTTCAGCTGGGCCATC
TGCACCAAATCCTCCTGCAGCACCAAGAACTTCAGCTGGGCCATCTGCAT
CAGCTCCTCCAACATGATCTGCAAGGCCAAGAGCAACTGCTGCCAGGAAA
GGGGCAAGGGTTTCATTGCACCAAGAACAGCTGCTCTAGGAACTTCTAGG
CCAGCAAGGTCGATCAAACCCACTCGTAAGGTAAGAGAATACCTGAGTGC
CAGTGGGATTGACAACATGACAGTTGAAGACCTGAAGAAGATTATGTGAT
GCCTGTGTGCACATGACTGTTGAGTGCCAGTGGGTTCTGTCTTATAAAAC
TATTTGTGTTAAACTGTTTGTGCACATGACTGTTTGTGCCTGTGTGCACA
TGCCAGTGGATTATGTGATGCCTATGTGCACATTACTGTTTGTGCTAAAC
CTATGTTTGTGTAAAACTATGATGTGCTGAACTATGTGCATTGAGTTTGT
GCTAAACCTATGTTTGTGTTAAACTAGATTTGCTGAACAAACTATGTTGG
TTCTGTGCTCTAGATCATATGGGTGTTGAACACACTATGATCTTGATGAC
AAGCACTATAGATAAGGAAAGAGCCATTTATTAATGGTTCAACACAAAAT
CCAACACAATAATCTTAGTGGCGGAATTTAACAATCCATTTAACATCAGG
AGATGGACATTGTTCATAACATAATGGTTCAACATTACAGGACATAGTTC
AAATGGTTCAACACATCACAAGCACTACCACACCAAACACAATGGTTCAA
TACATCACATACAAACAATGGTTCAATACATCACATACACATAATAGCAC
TAAACATTTCATGGCTCATCACATATGGCCTTAATCATGTTGAGCTTTTC
CTTGGTTGCAAGATTGGCTTTGAAAAGATCATGAAGAGAATATTCTAACT
TTTTCTTCTCCTCCTTCAAAATGCCTTTTTCATCTTCCCAACTCCTTTCC
CTACTCTTCATAATCTCTGCTTGTGTGTTCCTAACATTCTTCAGCTCTTC
CAACTCATTTTTAAGAAACTCCACTTCTTTCTTCAGCATGTTCCTTTCCT
TCACCACCTCCAAAAAATCATCTTGATCTTTCTCTTTTTCCTTCTCCTTG
TTCATGGCCTTCCAGTTTTGATCCAACACCTTAGCCTCAGTATTGTCCAT
AAATTTCTTTATTTCAGCTAAGAGATTTGAATGTTTCTTCTCAAGCTTCT
CCTTCTCTTCAGCCATTTCTTTTAACATCATTGTACTCTCATACCTCTCA
TCAATTCTTGCTGATTTGCAAGTATTGTACATTTCCCAGAGTCTGAGAAG
AGCATTTTGCAAAGTCTTAGGCCACTCTTCATCTACCCATGACTGGAACC
CACAGTTCTCTACTTCCTGAGAACAAAGCATACCACTCTAATTAATATAT
TTGCATCAGATCAATAAAGCAACAAAGCAGGCCATTTTGGTCTCTACTAA
AGAAATTTCAACAAGCCATTGATCTCTTATTAATAACCTAACATGAGAAA
TGAAAACAAAGCAGGTAATTGGTCTCTAATTAACAAATTTGCATCACATC
AATAAAGCAATAAAGCAGGCCATTTTGATCTCTAATAAACAAAGCAGGTC
ATTGGTCTCTAATTAACAATCACTCTAACTAAATATGTACAATGTGACCA
AGAGAGGAACTGTCAAAACACACAATCTGGACCGGGTATCAAATCAAGCA
CAAATATTTACTAAGGTGCATACAACTTACATTCACAACTGGACATAAGT
AGAATTTGCGACCAGTGTCTGTCCCTTCAAACGCAACACACTTGCGCGGC
TCCTTCTTGTGCACACGACAGAGCTCAGGGCACCCAACAGCAATGCCATC
AAATGTTGGATCATCGACGGTGCAAGGGGCAAAGTCCAGGGCGGTAAATT
CCTAAATAGAGATCGGGGGCAAAGTCCAGTGCGAGTTTAAGAGCTAAATC
GATGAAAAAGTAGCAACAAAAACAACCCTAGATCGGAGATCGGGGGAAGC
ACAGGAACATGGAGCTTACCGGTAGGCGGGAGGACGAGGAAGAACCTTCA
TCCCAACTGGGCATTGCAACGGCGGCGACGGAGGGACGAGAAATGGGTGG
CGGCGGCGGAGGGACGACGGCGGCGGCGCGCAAGCTATGGTGGAGGTGGG
GGGAGAAATTGGACTGACGCGGCCCCGGTGCCACCCGTGCGGCCGTTAAC
GGCCGTGAGCGGGCGTTGTCCACGTCATACCGACAGGTGGGGTCGGCTGG
TCAGAAACAGTGTCAAAACGCTCTCAAACGCGGTTTCGATCGAATTGCAA
AGAACGGACCAAAATCTGGTAGTTTTGTGTTCTGAAAAGGTAAAGTGGTA
TGATACGGTAAATTTAGGTAGTAAACTGGTAGTTTTATGCTATAAACTCC
AATTTACTAGTTGCTTTTTGGCTAACAGAATGATGAGCAGAATGGAAATG
ATTGCCAAATGACCAATCAAGTTGTAGAGCCTCCTAAGAAGAAGAGGGTA
TCAGGAAGAAATGAAGTGGAGAAAGAGAACAATAAGGAAGTCGCCAGCAG
CAAAGTGCACAGTGAAAGCAATCGGTAGGTACTCAACACACGTTGGAACA
GTCTATTGTGGAATGATTTGTGAGTTTGTCTGTCACCATAGCTGGCCACA
TAAACTTTAGAACTTTGTAGATTTTTTTTCTTTAACACCACATCAGAGTT
GAAAATGAATTGTATGCAGCACTGCGTAAAATCTAAAGCACACATGCTCT
TAATTACATTCTGCATGAAATAACTTAGCTCTTGGAAACATTTTTCCCTT
TAAGATATGCATTAGACTCTTGTAACTATGTTCATTTGTCTTAGATTACG
AGCATGGGCGGATAAACAAGCAGGTGCTACTCTTCCCACCATTCTACTCC
TTAATTGATATAAATTCGAGATGTATGAAAAGGATAACAAACTATTAGTC
CCACAGTTTGGTGTAAATGAGTGAATTTTATTATGACAATATCTGTGGAC
AAATATGTACACCAGGTAATTTGCATGAAAATTCAAGTACTCCAAGAAAG
TAGCACTACCTAGGGATGCACTTGATTCATGTCATCTCAACCTACTGAAA
TGAAACTCACAAAGGTTAGGGGAGAATGAGACCCACATATACCATGAGCA
GCAATATAAGTCAATCAACAAAAATAGCATGCCTAAGTGACAACAACCAT
GGTATATAAACAGGGGAGATAGAGGATAATTTATTGTGAGACATCAATGT
GTACTGTGTACATATATTCTGATAATTTTGCAGAAAAGTAGTGCATAAGC
GCTTCCTGATGGATCGTATCGGTACTTCGTAGAGATGAGAAACTCTTGTT
ATATGGCAGAAATTAAGCAAGTTGCCACAGTTGAGTGATTGGGAATGCGG
TGAATACAAAAAAGACCTTTAGAACATTTGTTACAGTCAGAGTTAACTTA
TTCTTTCTGGCTTTTTTTCTGATTTTCTAAGGCAAACACGTACTTCCTGA
AGCAGCATCGCTAATCTAATCTAATGTGGTTACAAGAAGGCCGATATGTT
TTGGCTGCGGATTATTGGTTTTAACCCAGTCTTGTATTCTGATGGTGTTC
TGTCTTGCAGCTCTCCACACAAGCTGGCAATCTACAATGCCCTGGTGTAT
CTCCGCAGCGTGAAGGACAATTTCAAGAACAAACCTGAGAAGCACAGGGA
GTTCCAGGCGGCCCAGAGTGGATTCCTCAGCAGGAAGTCTGTGATGCACG
AGCACCTGCATCTACGCAAATTCTGCATGTTTTGAACCTTTGCATGGTGA
AAACTTCAGTCGGGTCCCTCTTTTTTTTGCAGGATCGATGCTGACACCTT
TATCAGCGCTGTAATGGTCCTGCTTGACGGGCACCCCGAACTCATCCTTG
GGTTAAAGAGTTGTTTTACTTGTACTCCGACACAAGCATTAGGGAGCACC
GACACCAAGTGTCAGGGAGTACATTGACTTCAAGGGTAAAACCGCAACAG
AGGAAAACTAACGGTTGCTTGTTTCAATAGACATAACTCTATTCTGATCC
AGTGCACTAGACATGAAGCACACGTCTCTGCTAGAGCTGGTAGTTTTTTC
ATGACAAGTATTTCTCCTGTTCTTTATACAAAGTTCTATAAAAAATGAGA
AAGTACATGCATGTGATCTCTCTCCAAATGAGGAATCACTTCTAATGCCA
TAGATCCTATCTTGCCTGGAGCCAATGATCTGATAATTGATTCCTGTTTG
ATTATATGTAGGAGATAAACAGCCTGTTTGATGATCTTTAGTCATTAGTC
CTGTCTTGCTTGTGCTTGGAGCAAATGAGTTGCTGCCGCCTTTTTAGAAG
TCGAAGAATTAACATTATACTAGATTATATATTGAGACTATGCCTCTCTT
TTTTTTACTGCATTGACAGAACTTCGGGCTGCTTTTGAAGTGTTGGTGGC
TGGGCACTGCCGCAGGAGGACCCAAAATGAGGAGCTCACAGATTGATAAG
ACAGGGAACTGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.