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GrainGenes Sequence Report: AA004097

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Sequence
AA004097
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA004097
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTCGGTTCAAGAATGATGATATGATGAGCCGATCAGCGAGGCGTGAAGTA
TGGATCGCAGGAGGAAAACATACATCACCTCTGATTCGTGCATGATCAGT
AGGACAAGGTAACAATGCCTCCCCATCAGCAAGGAACTCACCTAGCAACT
GCCGACGGCCACTCATCACGCACCAAAGCGTTTTCATTGGCTCCGATCAC
CGTGCGGGGATGCTCCTCCTTCTTCTGATCCGCCGACGGCGGCATCTTTG
CTGCGAGACCCAGAGTGAGGGTCCCGAGTCCCGACGAGGTCTCGTCTGTT
GCGCACGGTGGTTGCGGCGGACCGTCAGATGAAGTTCTAACGGACCAGAT
CTAATGGAAGTCGAGCACGGCACCTTAGCGTACGGTCCACACAAGTACAG
TACCACGGAGCCCTCTTCCAATGAGCCGTGTTCTTCCGGTTTCAATCTGA
CCGAGTTTCTCCTTCCAAATTCGCAATCCATTCGTCTCTCCCGCAGTCCG
CACTCCATCCATGGCGACTCTCACCATGCAGCCGATCGATCCTGCCCTCG
CCACCCAGGAAGGCTCAAGGCAAGTGGTATCTTGGCTCGCTTTTTTTCCG
TACTAGATTTGACACCAGAGAAGGAGATGCAGAGCTAGAATTCGAGGGTT
TCTTTGTGATTTCTTTATGATTTTTGATACAGCAGGGGAAATAATCTTGC
GGAGGATGGTGGCGATTTGGGTGACATCGACGCGGGGTAAGTGCTTATGC
TTGTCCCATGTAATTGCTGTACCTTCGGTTATTCTTAGCAAATAAGGGCG
TCGATTTGTTCATATGGTTCCTATTCTGGGAAGATGGGTTTTCCTTGGGA
AATCAGATATCGTCCCGGCGGATTTGGCCGCTGCTGCTGCCGTCGGCGGT
AGCCTCCGCCTCCGCTCTTCTTCCGCGGTTCCTACCTGGTACGGGTCAGG
GAATGGGTTGAGTTGTGTACGCAAGATGTATGTGTATGATTTTGCTCGTA
TGAAGTGCGACCAAGTCTATTTGGTTCTTGCAGGGCGCGTCGGGTTCTCG
GAGGTGTGGTATATATGGTGGTGCCATTCTACAACAGAGTCAGGAACGTT
GAAGGTATATTTGTGCTGATTTGCAGGCTATTTTCTGTCTTGAAACCAGC
TGTAACCATTCATTGTTGACCTGCAATAGAACCAAGGTTTATGGGGCAAT
AGAGTAATCGTTGTGGGTTTCATGAATTTCTGGAAAGTAGTATGTGCTGT
TGAGTTGATGAATTGCTAATAAGTAGAAATATTGTGGAATTCATATATAA
ATTGCTACCAGGTAGCTTGAAATTAATCAGGTGTGCGATACAGACAACCT
TATTTCTTATGTCTGGTTGTTATCTCAGAAGAGACCGTGGGATATGTGGA
GACTGGTGTAGAGGTTGTGGAGCATATAGCCGAGGTAACGGAAAAGCTAG
CTGCTAATGTGGCTGACCAACTTCCTAAGGATGGGTCTCTGCGGCAAGCA
GCGGAAGAGCTCGAGTTCATTGCTGACATAGTAGATAAGGATGCAGAGAA
GGTTGAAGCAATTGCTAAGAAGGTTTGCTCCCATATTCTTGCTTGGACTC
TGCTGAAACGATGGCATGATACTATACATATTTCTGAATTTATATTTCAA
ATATGACGAATATTTCTTGGGAATATTGCCTATTGTTTAACTAGCATCGG
ACTCTGCTGTATGATCAATTAGTAATGATGAAGATACGTGAGTACATGAT
TTTTTCGTACCAAACTATAGTCTAAATTTTTTGCAAGAGAGTCTCTCGGT
GAACAAGAAATTTTGTAACTCTAATTCCTGGAGCATTTACTGATCCGAGT
ATTCAGAATAGATCAACGCAGAGTTCTTCAGAGAGCATAGAACATTCTCC
TGCCAACGTTTTGCAACTATTGGCCATTCTGCTCTTGAGACTAATGCATT
TTTTACTTTATGTTTGTTGGTTATTCCTTTAAGGAATCAAGCATGTTCTC
ATTATTTCTGGTGTTATTCCATATAGTTTGTGAGGCATCTAGAAATGCGT
TTCATAATTTTAACAGAGGTTTAACATGTAGCCTTCTGCTCACTACACTT
CATGGAACAACAGGATATATAAGTTAAATGGCGGGGTTGAAAAATTATTG
CTCCTTGCCTTGTCTTGTTCCTTCATGTCTCATGAAAAGCATTGAGCCAT
TGGAAACTGATACTATTTCCGAAGAAGTGTGGAAGATAACCAAGTATGAA
GCTATTAACTAATTGTGGTATTCTCTCTAACGCAGATTGACAACTTCAGC
GACAAGATTGACGCTGAAGTAGAGCCTGTTATCGAGGAGCTCGAAAAGGA
ACTCAACCAATAGTGACACCCTATGGTAGCGCAGTTGCACAGATATGATC
ACTGGTCATGTTGAGGGGAATATGTTCTCCATTGTACATACTAGTATATG
CGTATGCTGTCATGTTAAGGGTTTGTACATATGTGTGTTACAGAAAGATC
ATAGTAAGATTGTAAGGAATGGTGATGGTGTGATGGGTGCTCAAGGAGTC
AAGGGTGATGTACACCAATAGAGTATTGGGAACATTTGGAATGTAAAACT
TGGTATTTGGATATTCAAATAATAATTTGTGATGTAAGTAGAACTTTGTA
GACTGTTTTCTGAATTTGAAAAAAAGAACAAGAATGAAGTTAAATAAATA
GTACTTTGTTGGCGTAATACACCTGTCAAGCGGGCATAATTGTACAATTT
CTTCAAACCTGCTAGGCTGGCATTCCAGACGGGCCACTTGGCAAGACACT
GGCCGTGAGCGTTTTGCCTCGCCCTGTGGGATATTTTTTGGTGGAGGATA
AACCCCAGCGAGCCCAGCCCACGGTCTGGATATTTCGCCGTTGCCTTCTC
TGTTCTGCACTTCTGCCCTGCCTCCCAACAATGGCTCTCCCCCTCGTTCG
CCTCCTCCTCCCCTCGCTCCCCACGCTGCAGCCGCCGCTCCGCCACCCCG
AGCACTGCGCTCCACCTCGCCACGGCCACGTATCCTTCGCTCTCTCCACC
GCCGCCCGGTCCTCCGGCCACCGCGCGGCGTTCGCTGTCTGTGCTTCTAG
CGCTTCGGTCGCCCCGGCGCCGGCGCCTGCGGAGACAGAGGCGGAGGCGG
AGGATGAGCAGCCCACTGGGCCGAAGACGCGGCTCATCGCGATGAACATC
CCGTGGGACTTCACGCCGGACGACATGCGCGCTCTCTTCGAGAAGCAAGG
CACCGTCGTCGACGTGGAGGTAACCGTTCATTTCCGTTGCCTTATCCCAA
CGACGAATTGTGAGTAGCTGTAATCTGGAAGGACGTTAGTGTACACGAAT
TGAGGAAGTGCCGGTATGGTTCAGCTATATTGTCATTACCAGCCTGCTTG
GGGAGAATGAAATGAGGTCTAAAGTTCCTAAGCTCATTTTTACCATTGCT
ATGCCGTAGAAATTGAAATACATAGCACAAATATAGGAGACTAGCATATC
TCATATCCAACCCTGTTATATCTGAAACAGTATGTAAAGAGGAGAGACAT
TGAATCTTAACAGTTGGTAAAACCACTCCAAGGCATTGAATCTTAAAGTA
AGCTTGGGGAGAATGAAATGAGGTCTAAAGTTCCTAAGCCATTTTTACCG
TTGCTATGCCGTAGAAATTGAAATACATAGCACAAATATAGGAGAATAGC
ATTTCTTATGTCCAACCCTGTTATATCTGAAACTGTATCTAAAGAGGAGA
GACACTGAATCTTAACAGTTGGTAAAACCACTCCAAGGCATTGAATCTTA
AAGTAAGCTTGATTTGTTCTACATGATTTTGGTTCGGGGCATGACCAGAA
AGCCTATTCTTGATATGCCCGTTCTTGTAACGCTGATTCAAGCCGTATCT
CTAATGTTATCCTGCATGACATCCATTTTTGGTATTCTTCCCTTGACCAA
ATTATGTGGATGTGTCTAGCATTTAGATTAGATTCAAATTTAGCATTGGA
TAAACTTAATGCAAATTGGTAGATATACTTCTTACTACATGTTTCATATT
GGGAATGTAGTTTTCCATACAATACAATTCAAAAGGGATGTATTTATTGA
TTAATTGTTCATGAAAAAATGTACGGCAGGAATTGTTAGTGATTGCTTTT
GTTTGTGAATTTCTAGCTTTCGATGTACAGTTCCAAAAAGAACAGAGGAT
TGGCATTTATAACCATGGGTTCAGAAGAGGAGGCTCTTTCAGCACTCAAC
AATCTCAATTTGTCTGTAAGTGCAAGCTTGTTTACTGAAAGAATGCCTCT
CTTCTTCTCAGAAATAATCTACTTAAATCATCATGATTGCTCTTTTCCTA
GAATTCAACCTAGCTACTGAGAATTGTTTATCTCCTGGTCTACCAATTTG
TTTTACAGACTTTGAACGATAGAACAATTAAGGTGGACTTCGCAAAACCT
AAAAAGAAGCAACCTAGTGTGCCTTCAGCTCCCGTGGAAAAAAATGTTGT
GTTCATGGGAAATTTAATGTGGAGAGTGAGATCACGTCATCTTCGGGAGT
TATTTGCCTCAACTCCAGGTGTCCAATCAGTTGAAGTTATCTTCCATACC
ACCACGCCTAGGCGATCTGCTGGTTATGCATTTGTTTCCTTTTCCTCGAA
AGAGGAGGCAGAGGCTGCTATTGCTACCTTTAATGGCCAGGTAAATATCC
TGAAATGTTGTATGTACAAAATTGTTAAGATGTTATTTGTTTGCTGTTCA
AATTCTAGTGCATGCAAATGTGCTAGTGCAAGGCAAATGCTCACACACCG
CACACGCACACACCTGCACATTCAGTGCACACGTTAGGAAAAATATTGAA
GGCCCCATCTGTAACTTGATGCGGGTGCACATTGCCCCACTGAACGCTCA
CGTACATTTGTACTCCAAGTAAACACGTTATACTGTGTCAGTCTTGAGAA
TTAAACACCATTGACAGGGCCATCCTTTTTTGTGTCATATCTGACCTATT
GTAGGAATTGATGGGACGATCAATTAACGTGATGTTCAAAGAAGACAATG
CCAAAAAGAACAAATCTTCTGCTTCAGAAGAAGAGACATTGGAGGTAGAG
TCATCTGAGGACAGTGATAGCTAAGAATAGATTGTTCTGAGCACCGCAGA
GAGAAGTTTAATGAGTTCATCTACAGCTACAGGACTACAGTGCTCTTTTT
CAGTAATAACTCTATCTCAATCCTTGATCGTATTTGTTTTTTGTACACGT
TTCAGTTACCAAAGGAGGAAAATATATACTACATATTTTGAGAAATTAAA
TAACATCCTTTCTTCTATTTGCCAATCCTAATAAGATGTCTTTTCATTTT
AATTTTGAACACCAATTTCTACATTAGTGAGCAATATAGATTATAATAAT
GTTTGCGGCTCTGGTTGCCAAACACATTTTCATACTGTAAGCAAACAGAC
TTCATTTCATATTTTTTTGGTATATCGTTCCTTCTGACTAGTTGAGCTTT
GCATCTTAGCAAATGCATTTTGACCATTAAAGGTAGAGTACTAGGTAATT
ATAGAGCACTAATTTTCATGATTGTTTATATGATCCACTGGACGTTTAAA
ACATGCTGCAAGTTGTTATTGTAGCATTATCTTAATTATGATTGTTTATC
CCTCCTTCTCCGACTGACATTTCTTCTTAGACAGGGTTACCAATCTCCTG
GTCGATTCCACTTGTTCAGCAACTCTTGAGTCTTCAAATACTGCGTTTTG
TAAGTTCTCCACTTGATCTGGATGACATTTGGAGGTTATCTTGATGCTAG
GAATACAGAAAGTCCGTGAGCTGTCAACATCTGAGTTAATTTAGAATACA
AGTGTTAATGAAAGCGCAACCTGCTGACGGATGTGACCATATTTTTTGTC
CTTCTGCAATGAAGTATATATTTAGACCTGTAGCAGTTTTGGCGGGTTTT
TCTTTATGGATAAAAATGAGCACATCCTCATCCACCACCTGCTAAGTCAG
TGTGGCACATGCACTTCCAAATTTCATAACCAGACTGATTATAAGGTAGT
TGGTGCAACCTTGAACATGCTTGTTGACTTGTTAACGTTTGAGAAAGATC
ACTGGTATATCTCGCTTTTTTTCTTTAAGAACAAAACTGTGTAGGGTCTT
CCATCCACATCTGTCGGTTCGAGTTGACAGATCAGAAGTAACTATTCTTC
GGAATCAGGGTACTGTGCTGGTCATAATTGTGATGCAGATAGCCCGACAT
GAATCTAAGGATAGATGAACCCTTTGTTTTACCTCCTCCTTTTCTTTTTG
ACCAGAAACCCTTTTGTCTGCTCAAAGCATATCAGTTGCTAGACACGCAA
TCTCGCTGCTATTCAGGTCTGGTATCATCCAACGTCGAGCCACAAAACAC
ATGACAGAGGAAAAGAGGTCGGCTTAACGCGTGCAGAGACGTGCACGGAA
TGGATAAGTTTCGAACAAAGTCTTGCGCTGATCGCTTGTTTAACTTAACC
GTCCCTGCGAAGATTCCTCTGTCGCGCTCACTTGTCGTTTGTCAATAGCA
ACCTTTGTCTGAGAGTAGTATTGTCAATCGTAGCAACTTGAGTTTCAAAA
AAAATAAAATCGTACTAGCAAGTTGGCAGCGTGATTCCGTACTCACCTAT
GCGTGGCGCACTGGTCAGATAATTTATGTTGGAAAACGCCGTGTCCATCC
TTGTAAAGCACGACGATGATGCTTTGGTCGACGGGGACGCAAAGATGCAG
AGACCATCGGAACCGGGAACCGACGAGACCGAGACGACGCCAGTGGCTGC
GCTGCGTCGTCTTTTGCGCTGAACGGAACGGTGTTTTTTTTTGACGGAAC
GGAACGGTGTTAGGCCGAAACGAAAGCACGCACGCCAGGTTTCGGAAGCA
GCGTGACGTCCGTCCGTCCGCTCACTCGCTACTCGTCTCGGCAGTGCGCG
CGGAGTGATACGCCACGCGAGTCATCACCTCCTCCTCCTCGTCGCGACTT
TGCCGGTTCTTCCGCGCCAAGCCAGATAACCCCACAAGCATCACGCGAAA
CTGGTGCCTCCGCGCGGCGGCAACCTCCTATCCCCACGACCCCACCCCAA
CCCCACGCCCACGGTTTCTTCCTCGCGGAAGCCACTCCGATCCTTTGCGC
CCACGGTTCGTTCAAGGCTTCAAGCAAGCAACCGATCCCCCTCCGTCCTC
GCCTCGGCAGTCCGCACCAACCCCCGCGCCCCCAACAAACACCACCCCAC
CGCGTTTCAGTTGGGGGGAAGCAGCGCGCTGGCGTTAGCGGCGGGGGCGG
GAGGATCGACGAAGAGAGGCGCGTCCGGCGGCCTGGAGCGGCAGCAGCAC
GCGTACGAGCGGGAGATGCTGCTGATGGCCGCGCCGGGCGCCGCCGCCGA
GCACCAGAAGCGGCGGCGGGGGCGGCCCTTGTCCGCCGATCTGCTCCAGA
ACTGCGACCTGCCCCCTCCGGCCAAGCTTTTCGGCCCCTTGCCCACGCTG
CAGAGGTAGTAAGGCGGCCCCCGCGTTTCTACTTCTTGTTTCCTCTCTCA
CTCGTCCGCCGTCCAGGTAGCGCATTGCTCACACATGGTGTTGTGGCTTC
TCTTCTTGGTGCGACGATATACAGGTTGGAGAGCGCGGCGAGCACGGACC
AGAACCAGAAGGGTAAGGACGGCGGCAACGACAGCCTGCTGCGGGCGCTG
CGGCTGTCGCAGTCGCGGGCAAGGGAGGCGGAGGAGAAGCTGGCCGCCGC
GGGCGCCAGCAACGGGGGACTCGCGGCGCTGCTCGTGCGCGACTCGGTGG
CGCTGTCGGCGCACCGCCGTTGGGTGATGATGCTCGAGGCCGAGAACTCC
GTGCTCAGAGGAGGCAAAGGAGGAGGGGCCGCCGGCGCGGAGCCCGGTGA
GGACGAGGACGGGGGCGCGGTGGTGGCCGCCGCGTGGTGGGTCGCCCTCG
CGGTGTGCGTCGGCATTGCCGGAGTCGGCCTCGCCCTCGGCAACCTCCTG
CTCTGAAATTAACCGACCTTTAATGGAGTAGTAGATTTTTTTTGTGTAAA
TTATTATGCGTCCGACACCTGATCCATCGGACGATGATCGTGTGTGCTCC
AGCACTTCGTTTTACAGTGCGTGCGGAAATGTTAACGCCTGCTGGTCGAT
GCTTGCTTACTTACCTGCATAGCAATAGAACCTCGTGTGGTAAACACACG
AAATCAAATACTGTACGGAATATGACAAGACGATGAAGAGGGCGAAGCTT
GGAGGATTGGGAGATTGGACCTGAAGCTTCGGTGTCCGTCCCTCTCCACG
TTATCAAGAGATTCATACATGACACTGAGTAGTGGTACTGTGGTAGAT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.