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GrainGenes Sequence Report: AA000873

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Sequence
AA000873
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA000873
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGAAGCTTGCTTCCCCTGCTTTGGTCCGAGAAAGAAGAAGGTGCCACC
GCCGCCGGCGGAAGCAACTTCCGTCGATCCGCCCCGCCGCCATGACGTCC
CTGCTGCCGCTCGAACTTTCTCCTTCGAGGAGCTGGCGGCAGCGACCAGG
AGCTTCGGAGAAGACAGGCTCGTCGCTGGTAAGGAGCCCTGCCTGTACCA
AGGTCACCTTAAGAGCGTCAACCAGGTATGACCGATTGAATCCAGCTACT
GGCTAATTCCTTGCTAGTTAGTTCCATATGTACTCCATAATTCGATGTGC
TTGTACATTTGTAGGTTGTTGCCATGAAGCAGCAGCATCTTGTCGATCGT
CCTGAATCAACAGAGCAACGCAACAGCGAGTTTCTTGCTCGCGTGCTGAT
GCTCAACGCCCTGCGCCACCCCAATCTCGTCAACCTGACCGGCTTCTGCG
CCGACGGCAGCCACAGGATCTTGGTTCACCAGTGTTAGGAATAATAATTC
TGATAGGACACGTAACGGTGTCGTGTGCGTGTCTGTGTTTTGAGTAGGAC
TAGTAGTCCAACACCTATTCGTATTGACGCTGCGTCTTGCCCGGTATATA
TACACCCATATAGTAGCCTTGTAGCAACGACATTTAGGAGGCTGTCGATC
CCGGCGGCGACGAGTTCAAGAAGGGCGCGTCGAAGTACCGCAAGGACCGA
CAGGCACTCACGGCCATCGGCTCTATGGTGCCGGCGGACGTGATGCAGCA
CCTGATCTCGAAGAATTCTGCAAAGACGGCGTGGGAGACACTCAAGACGT
TGAATCTTGGGCGCGAGCACGTCCGCAGGGCGACCCTACAAACCTTGCAG
AAGAAGTACGAGAACCTGGAGATGGAAGGAGATGAGACGTTGGACGCTTT
TGCCTCGAGGGTAGCCACAATTGTCAACGGGATTCGCGCGCAAGGTGCGA
AGCTGGAAGATATCTCAGTCGTAATGCGTTTCCTTCGCGCGGCGCCGCCG
CGGTACATATCTGTGGTGTCGGCAATCGAGCAATGCGTTGATCTCACCAC
CCTCACGATGGATGACCTGGTTGGAAGGTTCAAGGCGCATGACGAGCGGA
TAAAGATCACCTACGGTGACGCGAATCAAGATGAGCACCTCATGCTTACA
CGTGCCCAGTGGCAGGCAATGGTCGCCAAGGAGAGGAGCGATAAAGCATC
TAGCAGTGGCGATGGTTCGGTCCCGGCGAAGAAGTCGGACAGCAAGCCGA
AGAAGCCAAAGAATAAATTCGACAAGAAGAATCTTCGCTGCCATAAGTGC
AATCCGCTCGGGCACTTCAAATCGGAGTGTCCTAACCGTTCAAAGGAGAA
GGCTCTCATGGCGAAGGAAGGAGATGATGGACCGATGATGCTCATGCTCG
AAGCTTGCGAGTTAATGACCACCAAGGAATCAACTCCTCAGGAGTCCGCT
ACAGAGATCGTCACGCTCGTGGAAGAGAAGGTCTTCCCGCGGAGGATGCA
GACGGCTCACGACGTTTGGTACCTCGACACAGGCGCTAGCAACCACATGA
CCGGCGACAAGGCTCAGTTTTCTGAGTTGAACCTCACAGTTGGAGGCTCC
GTTCGATTCGGCGATGGGTCGAAGGTGGAGATTGCAGGACGAGGCACTGT
CCTATTTGAGTTGAAGGATGGAGGTCACAAGGTACTCACTGACGTGTACT
ATATTCCCAAGCTTAAGACCAACATTATCAGTCTTGGTCAGCTCGCGGAG
CGTGGATGCAAGATCGTGTTGGAGGACGAGTTCCTGTGGGGATATGACCG
CCAAAGGCAGCTCATCATGAAGGTGGAGAGGTCGAAGAATAGACTCTACA
TCCTCAATCTCAATCGAGCGGATCCAGTATGTTTGATGACAAGCATGGAA
GACTCGGCGTGGAAGTGGCATGCACGCTACGGACATCTAAATTTCCAAGC
TCTACGACAACTTGGACAGAAGGAGATGGTACATGGCTTACCGTGTGTTG
ATCATGTTGAGCAAGTGTGCGACGGTTGTCTCATTGGGAAGCAAAGGCGA
GCCCCGTTTCCAAGGGAGGGACAATATCGAGCAAGTAAGGTTCTTGAGTT
GGTGCATGGAGACTTATGCGGACCAATCACGCCGGCGACCCTCGCCGGGA
ACAAGTACTTTTTGCTCATCGTCGACGACTTCAGTAGATACATGTGGGTT
GTGTTGCTGAAGAGTAAGGATCAAGCTTTGCAAGCGTTCAGGATTGTGAA
GATGGCAGCCGAGGTGGAGTCCGAGGCAAAGTTAAAGGCCCTCCGTAACG
ATCGGGGTGGGGAGTTCAAATCCAATGAATTCAAGGAGTTTTGCGAAGCT
CATGGGATCCGGCGGTATCTCACCGCACCATATTCACCGCAGCAAAACGG
TGTTGTGGAAAGAAGGAACCAAACCGTGGTGGCCATGACAGCAGCATGAT
GAAGAGCAAAGGCATGCCAGACAGGTTTTGGGGTGAGGCAGTAAGTACAA
CTGTTTATTTGTTGAACAGGGCACCAACTAGGAGTGTAGTTGGTATGACG
CCGTACGAAGCATGGTACGTACGCAAGCCCTCGGTTGATCATCTTCGCAC
TTTCGGGTGCGTGGCGCATGTGAAGACGGTGTCCGGACACACAACCAAGT
TGGCGGATAGAAGCACTCCAATGGTCATGATCGGCTATGAATACGGTTCG
AAGGCGTATCGCGCGTACAATCCAGTGAAAAAACAGGTGGTGGTGACACG
CGACGTCGTCTTCGAGGAGGAGAAATCATGGAAATGGGGCTCTGTGGAAC
CAGTACAATCAATTTCTGATGAAATATTTACTGTAGTCTACAGTGATTCG
CATGCAGATGATCAAGAAATGGCGTCCCGTGGCGTTACGGATTTAGGCGC
TGGTTCAGAAGATGGAAGTCCGGAAGTGAGCAGCAGCAGCGCTACGCCTG
AAGAGGTATCTCCACGTGGGAGTCTCGGCACGAGCAGCAGCTCACGCGCT
GCACCTGGAGGCTCGGCGTCGCCATCCAGTCCACGCGCGGACGAGAGCCC
TGGCGCAAGTGGCCCATCAGCTGCACACTCCCGTCCAGGAGGGACTAGCG
GCAGTCCAGAAGTGGACGCGGGCGACGATGTCACGTCGCCAACATGCAGT
ACACCGACAGAAACTGCAGGAAATTCAGTAGACGCTGAAACAAGTACTAC
GTCAGCTTCCACGTCTCCTCCAAGTGCATAGGAAGAAAGGAGACGGCCAC
CTACTCCATAAAAATTCCGAAGTGTACTGGAGTTGTATCCGCCGGAGACC
CTTCGTACAGCGCGTGCGCGAGGGAGAGGACAAGCTCGGTGTTTACTCAC
CGAGAAGCCGACAAAATTCGAGGATGCTAATACGGAGGAGTGTTGGCGTC
GGGCTATGGATGAGGAGTTGGGGTCGATCCGCGACAACGATACATGGGAG
CTTGTCGATCTACCCAACAATCACAAGACCATAGGGCTCAAGTGGGTGTA
CAAGATCAAGAAGGATGCCGAAGGGAAGTTGGTGAAACACAAAGCTCGGC
TAGTGGCCAAGGGATACGTGCAAGAGCAAGGTGTGGATTTCGAAGAAGTG
TTCGCTCCCGTTGCAAGGATGGAATCGGTGAGATTATGTGGCATCCCGCA
AAACCACTACTAGAAAATCGCGTTGTTTTTGTGCATTGCATCATCATGAC
CGCATGCTCATGTCATCATGCCGCATTGCATTTGAGCATCGTCATCATCA
TGCATATTATTTTGCCTAAAAACTATTTGCGAAAGACTATTGACTTCTGG
AACTAGCCCTCCTTCTATTTCAAATTAAACCCCTGATGCTGCCGGATATT
TTGTTTGTCTAAAAACTATTTACAAAAGTTCATCACAAATTAAATAAAAT
ATTAAATTATTTTGGCGGGGGCAGTCGAACGGGCCGATTCGACCCGAACG
ACCACCCCCAAAATAAAACGGTCTACCCCAAAATCCTATTCCTACCCAAC
CTAGTCTAACCACCCCTCCAGCCACCTCACCCCAACCTATCCTATGTCGC
CACCTCACCCTCATCCCTCCTCCCCACCACTCACACGCTGCCACGTCACC
CCACACCACCGCCTACTCCCTCCCTCCTCTACCCCACTCCCTCACACAGC
CACCTCACCTCTCAGCCCCCCACTCCCTGACCGCCTGGGTCCCACCCGTC
CCCTGGCCCCACCCCTCTCTCAGCACGCGCACGCCACCGCACAGGCCCAC
CCCGACCCCGTCGTCCTCATCCTCCCACCCCCGCTCCCCTGGTTCGCTCC
CTCCTCTCTGCTAGCTTCCCCTCTTCCCTCCCGCCGGTCGCCGGCGACCA
CCTCCGCCGTCCGCCTCCCTCTGGCCCGGGCGCCGCCGCTTCCCGCCGGC
CGTGGCCCCTCCTTCCCCAAGCAGGCCCCGGCGCGGCGCCGCCCTCGGCC
GCGACCCCGAGCGCGCCGCCTCCGGCGCCTCCCGCCTCTGCTCCTCCCTC
GCCACCGCGACCACCCAGCCGTCTGCCCCGCAACCTCCGCCCCCGAGCGC
TCCGGCGCCTCCACCGCATCGCCCCGCCTCCGCGCCTCAGCTCGCCAACC
GCGGCCGCCCCCTCCCCCTCCTCCGCGGCTCGTCTTCCGCCGCACCCCGC
CGGCCTCCGTCCGCCTCCCCGTCGGCCCGCGCCCCGCCGTCCTCGTCCCG
CGTCCCGCCGGGCCTCTTCCGCCGCCGTTCCTCCTCCTCGCCCGGAGCCC
GAGCTCCGCCCCGCCTTTCCGAGCCCGCGCGCCGCCGCCAGGGACGCCCG
CTCGGCCCGGCCTTCCGCCACCGTGTCCCCGACCGTTGCAGACCGCCGCC
GTCCGCCGAGCTCGCGCCCGGCTCTACCTCGTCGCGCCGGCGACCTCCCC
TCTACCTCTCCTTCGCGGTCCGCCCCACGTCCTCCTCTGTCCCCGAGCGG
ACCATCGGGGCTCGTCGTGGGACCCGCCCGCGGCCGCCTCCTGCCAGAGA
ACCCTGAGCTCGCCCCTGTGCTGTCACGTTCCGCCCGAGCCCGGCCAAGT
TTGGCGCCTATGGTCGCTGCATCCACATCATCCCCTGCTAAAACCGCGAG
GCGTTTCTCAGTTGGAGAGCCACCCGATCCCTTGCTCATCGATAACGTTG
AGTTCCACCTCACCAAGATCCTCGGAATCGCCAAGGCCGTCATAACCAAA
GCGTGAGATGACCACCCCAAGACGCTCGACTCCGATCGATGCCGCCATCG
GAACCTCTGTGGTTAGTCGACGAACCGCTGCCGATCCAAGTCTGGCAATG
ACACCCGAGTACTCCGACAGGGACGCCAAGACCACCGACAAGATCTCCAT
CCGGGACTCCAAGGACTCCCTCACGGACATCAAGCGCCAAGATCGTCTCA
CGGGATCCGAAACGCGAACCGACAAGATCTCCGTAACGACAAGCTCGTCT
CCCAGACGCCATGGCCGTCGACATGACCCGAAGACCACGGAGGCGACAAG
ATCTACTCCGCTAACCGAGAACGTTCCGTCGAACCCTGAACCCCAGATCT
GGACCCTGAGACCGAACCCGTCGAACCCTGGACCCCGTTGAACCCCGAAC
CCCGGAAACCAAGATCTGCCGAACCCTAATGTGTGACCCCTCTCCTCGAG
CCCTATTTTATAAATGAAATAACAACTTGTTGCATATTAATTGTTCATCT
CGCATGCATATTTGTGTGGTTTGGGGGCCTTATGCCGATTCACCTAATAA
TTAAATATGGGGCCTATATGCGGGCAAATCTAGTCTCATATTGGCCTCAT
TTAAATTTGTGTAGCGAACCGGTAACTTATCTTGCCATGTCAAGACAGCA
TTTAATTTGCGGGGTAGCTAAATAACATGAACCACCTAATTAATTGTCGG
GACCCCCGGTGCTGCTTAATATTGACCTAATTGCATCGCACTTTTGCCAT
GCCATACATCATACATGCATCATGCCCGATCTTTTACCGTAGTATTAAAT
ACTGCATCCGGTGTTTATTCTAGTGTTTTGCTTCTTCGCGGATAAGGCCG
TTGAGTTGATGTGAGCTTCGCCCCGATCTTCGGTTGAACCTTCGACAATG
TTTTTCAGGCGAGCATCTCCCCCCTTTCTACCTATCTTACTTTTATAGTA
TTTATTCCCTCCTGTTGATCTATTGCTATCTGTGTTGCGATGCTCTAGTT
TCCGTACCCGTGATATCCCTTGCAGCCCTATATTGCCATGGCCACCTCCT
ATTACCTGTTGTTTGGTAGATAGTTGGACTTGCGCGTCGTAGTCGCTTGC
TCAAGTGCTGTTGCGTGTTGCCATGTACCACAGTTGTTGGAGTATTGCCA
CATGTTTGATGTTGGAGATGATATCGGCTTTATTTATCGTTCACTTTACT
TCCTGTTTAACAACTAAAATTGAAGTAAGTAAGCAGAGGCATCGGTGGGT
GATAGATAATATTTGGTTTCCGACCGCCCACTTGTGTCCCGTAGGACCCC
GAGTACTTGATACCTGTTCCTTGATTTATCGCGCTATCCACATACGGGGA
ATTATGGGACCCCCCTTAGCCAGAGCTTGATTCCGTCTTATTTCTTGGGG
CCACAAACTAGTTTGAGGTTTTATTTACGATCCTGTACTTATGCCATGCT
ACTTCTGTATTTACGATTGTGCGAGGAGCACACTGTAATGTTTAGGAATT
GTGACCCGTTTTCGCGGTATCGACAAGCCCAGTCACACTTTCGGGTTTCC
AGTCGTTTACAGCCGGCCCCACAAACCTTGAGTCCGTCTCGAAGTCAGCT
AACTTTGTTGCGGGTCTACTTAAAGGGGTGGCCCCCTGAAATATTTCTGA
ATCTTGTGATTGCTCTGTCGTGAAAGCCTCGTTGGGTTTTGATTTGGTTT
TTCCGAGGTCGATCGTGTGTGTGTTGCTATTTGTGCACCCCGGCCGGGTT
AAAACTTTCTGAAAGCCGTGTCCGCGGTTATGGACGACTTGGAGCACAGT
ATCTCGATCATAGACAACTATAACTAAAGTTTACTGTTATAAATTGACTT
GTATCTGATATGATTAGTAATCAGCTTCAACTACAACGGAATGGCTAAAT
AAAACTGCCAACGATTGCTTGTTTGGTTTGTCGCTTGCGACAATTGTATC
TGACTAGTAAGTATTGCAACTACAACGGAATGGTAAATAAAAATACCAAC
AACTGCTGGGTTTTGGGTTATCTCATGCTAATGGTATCTGATTAGTAAGC
GTCGCAACTACAACGGAATGGATAACTAAAACGGCCCACTGCTTATTTTA
TCAGGATGACTATCTATACTTGACTAGTAATTACTACAACGATAACTGAA
TAAATAAAACTGTCAACCGTGTGAGTTCCTCGGTTGACTTCCTCGTTTGG
TCTCGAGGGGGAAACACCAGGATGGGTTTGTTTGGTGGTAGTATCAGGTT
GGTTCCAAATAGGTCTTTCTTACCCCTCTCTGATTGCCGCCAGTTGTATC
GAGTCTCTATAGGTTGTTTAGTGCATGCTGCCGCTGCCGCTTCAGTCCAC
CATACCTATGTAGGTGAGGACCGCCGAATTCTAGTCTCGCCGTGTACTGG
CCTCAGTACTGACGCTCCTCTTTTTCCTTTGCCCTTTGTCGGCACCCCTT
TTGTTTAAGCAGGTTTGAGATCGACGTCGTTAGCAGGGTTACCCTTCCGG
CTTGGCCTGGGCAGGGTTATGGACGCCATTGGTTATTCTTCAGGGCTCTT
AGCCCCATTTGCATCTTGTCCGTAGTCGGACGCTCTATCATTTTCAAGGT
GATTTGGATCTTTGTATAATATATCTGTATTCTTGACTCGTTGAGTCGCT
GCTGTATATTTTTGTTCTGTGGGTCCCATCGAGGACTGTTGTGTAATGTT
ATTACTTCGTTTTCCACCCGCACGAAAGTGCCTGGTGGGCACCTTCGAAT
CGTTTCTATGCGGGTTTGGCGGGTTTCGCTAAAACTTGCATAGGGCCGAT
TCTGAGGGTGTTACAGATTACTTATTGCTGTCGCAGCTCAAGAATCTTGG
AAATTGCATCACATGGATGTGAAATCCGCGTTTTTGAATGGGGAGTTAGA
AGAAGAAGTTTATGTGAAACAACCACCGGGATACATCAAAGAGGGAGAAG
AACACAAGGTTTTGAAGCTACACAAGGCGTTGTACGGGCTACGGCAAGCC
CCTCGGGCGTGGAACATCAAGCTTGATCGTACATTGATCTCTCTCGGATT
CGAGAAGAGCCCACTGGAGCATGCGATGAATAAGCGAGGTAAAGGAAGGG
ATCATCTACTAGTTGGCATCTATGTTGATGATCTATTGATAACGGGAGCG
GATGAGAAGGAGATTGCAAAGTTCAAGCTACAGATGAAGGAGTTATTCAA
GATGAGTGATCTAGGCTTGTTGAGCTACTACCTTGGGATCGAGGTACATC
AAAAGCTGGGTGAGATCACGCTTTGCCAAGAGGCATATGCAAAGAAGATA
CTCGAGAAGTGTGGCATGGAAGAATGCAATCCAACTCATGTTCCGATGGA
ACCTCGTCTTAAACTGAGCAAAAGGAGTGAAGCACCTGCGGTTGATGCAA
CGGAGTATAGGAGTGTGGTCGGAAGTTTGAGGTATCTCATTAACACAAGA
CCCGACTTGGCCTATTCCGTTGGCTATGTGAGTCGCTTTATGGAAGCACC
CACAATGGAGCATTGGACAACCGTGAAACATATACTCAGGTATATCAAAG
GTACTACAAACTTTGGTATTGTCTACTCGAAAGAGAAGAAGGAGGTGAAG
CTACTTGGCTACAGTGATAGCGACATGGAAGGAGATATAGAAGACCATAA
GAGTATCTCGGGAGTGGCATATTTCTTGAGAAAAAGCATAGTAAGTTGGC
TATCACAAAAGCAAAAAGTGGTGGCACAGTCATCCTGTGAAGCTGAGTAT
ATTGCGGCTGCAACTGCGGCGTGTCAAGGTGTGTGGCTAAGGAGTCTACT
TGGTGATCTCACCAATCGGGAGGCGGAACAAGTGGTGCTCAATATTGACA
ACAAGTCTGCAATTTCATTGTGCAAGAATCCGGTGCATCATGACAGGAGT
AAGCACATTGATACGTAGTATCACTACATACGGCAGTGTGTAGAGGAGAG
CAAGATTGAAGTCAACTATGTTTGCACCAAAGATCAGCTTGCGGATATCC
TAACTAAATCTTTGGGACGAGTGAAGTTTGCGGAGATGCGAGAAAGGATC
GGCGTTCAAGCTGTGAAGATGGGCACATCGTGCTTAGGGGGGTGATTGTT
AGGAATAATAATCTCGATAGGACACGGAACGGTGTCGTGTGCGTGTGTGT
TCCGAATAGGACTAGTAGTCCAACACCTATTCGTATTGACGCTGCGTCTT
GCCGGATATATATACACCCATATAGTAGCCTTATAAGACAACCGTGAGAT
TCAATACAAACAATAAGACCGAGAGGGCCCTGTAGCCATCAACATTGTTT
TTCCTGTACGTACTCGTGTGAGTTGAGAGAGTTAGTTCTTTTGATCAGGC
TAGATAGCTAGCTTGCTGATCGTTGTTAGCTAGTTCTTATATGTGCGCAC
AACTCGCCGGAATACTTCGTTATCGTCACGTCGGACTGCACTCGGCATTT
GGGGCTAGGCCAACAACCAGTACATGCCTCTGGGTTCTCTGGAAGATCAC
CTGCACGGTATGTGCTGTGTGCTAGCTAGAAGTCTAGAAGAAAGATGATG
ATCTTTACTTAATCAGTGACACAGCTTCCGCTTGAGTTTGTCTGAACCAC
GGGATTGATCTTGTCAATTTTGCTCAGCAGATCCATCTCCAGACAAAGCA
CGGCTGGACTGGAGCACGAGGATGAACATAGCCGCCGGCGTGGCCAGAGG
ATTGGAGTATCTGCACGACAAAGGAGGCGTGGCGTACCGATGCCTGACAA
GTTCAGACATCCTGCTCGAAGACGGAGACGGGTGCCACTACCCGAAGCTA
TCTCAGTATGGACTGGCAAAGGTCGGACAATTTATTCAAGACCCTGGCGA
AGCCCGGGGTTTCGCCAGAACAACATTCGGTACTCTCGCCCCTGACACCA
TGATCACCGGGAAGGTGTCCATGGCGGCGGACGTGTATAGCTTCGGCGTC
GTGCTGCTTGAGATGATCACAGGGCGCATGGCCTTCAACCACAGTGCCGC
CGAGGAAGATCGGAGCCTTCTCCGATGGGTAATTGTTCGCAGATTTACAG
CTTGTTAATTTCGACATGGATGTTCTGATACATGCTATATTTGCTATTGG
CATTGGCCCAGGCTCGGCCATTGTTGCAAGACAGGGCGGAGTTTCGTCGG
ATGGCAGACCCAGCGCTGCAGGGCCGGTATCCGTCGATGGATTTGGAGGA
GGCGCTGGCAGTTGCTTCCATGTGCATCCAGCAAGAGCCGGCCATGAGAT
CGCCCATCAGCGCCGTCGTTACCGCTCTGGCTTGCCTAGCCTACGATCAA
GCCCAAGAACCACAC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.