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GrainGenes Sequence Report: AA011678

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Sequence
AA011678
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA011678
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
TATGGACTTGGGAGACTTTTGAGGATTGCCGCCTTGACACTGCCAGCAGA
CTATAGCAAATGGATTTTGCAGCATGTAGACCCAAATAAGAGAAGCATAG
TCATTGAAGGACAGGGTTCTATCCCTTTAACCGCGGATGGTGTAACAGAA
GTTCTAGGGCTACTAAACAGAGGGGATGATGTTTTCTATGGGTGTGATCC
TGAAGCGACTAAGTTTATGGCGAATCTTTCTGGATTCGAGAAAGGATCAG
CACCCAACGTTACCACTTTTTGCAAGATGATCGAAGACATGAAGGGGAGG
GCTGATGATGACTTCATGCGTGCTTGGGTCACTCTAATGGTCAACTGTTT
TCTATTCCCTACCACTGGCCTGACCATCATCCCTCGATGCTATCCTATTG
GTGTGGACCTGAAAAGAGTAAAGAGGATGAACTTTGCAAAGTTTGTAGTC
GACCAAATAATTGAAGGGGTTCGTAGCATGGAAAACAAAAAAATTCTACC
GCATACAAACAAGCCAAGATCTATCTACTAGATTGTAGCAACGAGTCGAT
GGAATAACTCACCCTCGAAGATTCCAAAGTGTTTAACGAGAGCGGATTCT
CGTGGGTGATGTAGTCATACTCTTCCCGATCTCAAGATCGCGTAGACGAT
CCTTCCGGCGCTGCGTTCCGGCAGCGCTTCCGCAGTCGGTCACACGTTCG
GTACTCGACGAAGACCTTCCTCTCCCTGTTCTAGCAGGCAGCAGAGGTTG
TAGCACTCTCCTCGCGATTCCGGCAGCACGACGGCGTGGTACCGGAAGTA
GAGGGGAGATCTCGTAGGGCTTCGTCTTAAGCCGGAGCGAGTATGGTGGA
CTATGAGAGAGCCTCGGTGATCTAGGGTTTAGACGCACCAAAGATAGGGA
GCTAGGACGGCGGTTAGGGCAAGGGGATTGCCCCAAGTCGGCGGCTTGGG
CAAGCCCTAGGGCAACGGCGGCTGCTATGGTGGCCGGCGGCGGCTAGGGT
TAGGGTTTAGAGGGGCAAGGTGTGTGTCTTGGAGGGGCAGCCCTGCCCCT
CCTTATATAGGTGGAGGGGGCGCGCCAAGGGGAGGGGAGTCCCTCCCCAA
CTCGGTCTCCAAGGGCCGGCGGTGGAAGGAGAGGAACTCCTCCCCAAGTA
GGTTTCCTACTCTCCCTCCACCAAACAAAATAGTCGTTTGACTTTTCAAA
TTGGCGTTTGACTTTTCAAACTAGGATTTGACTTATCCCTTTATTTTGTT
CAGCGATGACACCTAGTACATGATGCAACCATCCCAACTTGTTATGACAC
ATTCATGTACCCTTCCTCTCCGGAGTGCCGGACATTCTGGAACCTTCTAG
AACATTCCCAATGAAAACACCGGAACCATTCTCCAACCCCGAAACAGGAC
TTTCCTTATATAAATCTTATTCTCCGGACCATTCCGGATCTCCTCGTGAT
ATCCCTGATCCAATCCGAGACTCCGAACAACATTCGGTCTCTTACTCATC
ATTCCATAACTACTCAAACACCGTCGAATCCTTAAGTGTGTCTCCCTACA
GTTCGTGAATTATGCGGACATGATCGAGACACTTCTCCGAACAATAACCA
ATAGAGGAATCTGGAAATTCATATGGCTCCCACATATTTCTACGATTACT
TTGCGATCGAATGAACCACTTAAATACGATACCAATTTCCCTTTGTCTCA
CGATAGTTTACTTATCCGAGGTTTTGATCGTCGGTAGCTCTGCATACCTA
GTTCAACCTCGTTACTGATAAGTACTCTTTTCTCGTTCCCGTGATATGTG
ATCCCTTGTGAGCCAGTCACATGATTGCAAGCTAATTGGATGACATTCCA
CCGAGAGGGCCCAGAGTATATCTATCCGTCATATGGATGGACAAATCCCA
CTCTTGATCCATGTGTCTCAACCAATACTTTCTGAACACTCAATGCCACC
TTTATAGCCACCCAGTTACGGTGTGGTGTTTGATGTCATCAAAGCATCCT
TCCGGTGATGGTGATAAGCATGATCTCATGGTCGAAGGAATTAGGTTACT
ATGTATCAAAAAGCATATAGCAATTGAACTATTAAAATGACTTGATCTTT
ATGCTACGCTTATCTATAGGAGTATGTGCATCATACCATTCTCCTAACGA
TATGATCTTGTTGTTAATAACATCTCAATGTTCATGATAGGGAAACCACA
ATCATTTATTAACCAACAAGCTAGTATTATGAAGAGGCTTTACTAGGGAC
TCTAATTTAAGTTTACAAATCACACAAGTATTAATGTTTCCTTGTTAATA
CTATTATAGCATGAATGTAAACATTTATCATAAACACAAAGATATAATAA
TAACTACATTTATTATTTCCTCTAGGCCATATCTCCAACAGTCTCCCACT
TGCACTAGAGTCATCTAATCTAGATTATATGGTAATATACCGAACACCCA
TGGCAGTTTGGTGTTGGTCATGTTTTGCCCTCGGGAGAGGTTTAGTCAAC
GGATCCGCCACATTCAGATATGTGTGTACTTTGCAAATCTTTATGTCACC
ATCTTGGACATGTTCTCGAATAGCGTGAAAACGTAGCTTGATATGCTTCA
GCTTCTTGTGTGACCTTGGTTCTTGCGCATTGGCTATGGCGCCCATGTTA
TCACAGTAGATAGACATTGGGTCCAGCGCACTTGGAACCACACCAAGCTC
TGTAATGAACTCTTTCATACATATCGCTTCTTGTGAAGCCTCCGAAGCAG
CCATGTATTCCGATTCAGTTGAAGATCTCGCCACAACGCTTTGCTTTGTA
CTCCTCCAGCTAACTGCTGCACCATTCAAAGTAAATACATATCCAGATTG
TGATTTAGAATCATCCGGATCGGTGTTCCAACTAGCATCGGTGTAACCAT
TAACAACGAGTTGTTCATCACCTCCATAAGAAAGAACCATATCCTTAGTT
CTTCTCAAGTACTTAAGGATGTTTTTGACCGTTGTACAATGATCCACTCC
TGGATCACTTTGATATATGCTAGTTAAACTAACAGCATATGCAATGTCGG
GTCTAGTACATAGCATGTCATACATTAGAGATCCTATGGATGAGGCATAA
GGAGTCTTACTCATCCTTTCTCTATCTTCTGTCGTTACTGGACTTTGAGT
TTTACTCAAGGTCGTATTGGGCAACATGGGCAAGAACCCTTTCTTGCTAT
CTTCCATTACAAACCTCTTTAGAACTTTGTCCAAATATGTACTTTGTGAC
AATGATATTAGGCATCTTGATCTATCTCTATAAATCTTTATTGCTAATAT
GTAAGATGCTTCGCCAAGATCTTTCATTGAAAAACTATTATTCAAATATT
CCTTGACACTATTAAGAAGGTCTACATCATTTCCAATCAATAATATGTCA
TCTACATATAGTATTAAGAATGCTACAGAGCTCCCACTCACTTTCTTGTA
AATACAAGCTTCTCCATAAGTTTGTATAAAACCAAAACTTTTGATCACCT
TATCAAAACGTTGATTCCAACTTCGGGATGCTTGCTTCAATCCATAAATG
GACCGTTGAAGTTTGCATACCTTGTTAGCATCCTTAGGATCGACAAAACC
TTTGGGTTGCATCATATACAACTCTTCATCAATGTCTCCATTGAGGAATG
CTATTTTAACATCCATCTTCCATATATCATAATCGTAATATGCAGCGATT
GCTAACATAATCCTCACAGACTTTAGCTTCGCTACTGGTGAGAAAGTCTC
ATCGTAGTCAACTCCTTGAATTTGTCGAAACCCTTTTGCGACAAGTCAAG
CTTTATAGACAGTAACATTACCGTCAGCATTTGTTTTCTTCTTGAAAATC
CATTTGTTCTCGATAGCCTTCCGGCCATCTGGTAAGTCCACCAAAGTCCA
TACTTGGTTTTCGTACATGGATACAATCTCGGATTTCATGACTTATTGCC
ATTTATTGGAATCTGGGCTCATCATCGCTTCCTCATATGTCGTAGGGTCA
TCGGTGTTATCCACCAACATGACACTCATAACGGGATCATACCAATCAGG
AGTGGTACGAGTTCTCGTTGACCTGCGAGGCTCTGTAGCAACTACAACCG
AAGTTTCATGATCATCATCATTAGCTTCCTCTCTTATTGGTGCAGGCACC
ACAGGAACTTCTTCCGGTGTTGCGCTACTCGCAAGTTCGAGAGAAGGTTC
GACAACCTCGTCGAGTTCTACTTTCCTTCCAGTCACTTCTTTCGAGAGAA
ATTCCTTCTCTAGAAAGGATCCATTCTTGGCAACGAAGATTTTGCCTTCG
GATCTATGATAGAATGTATACCCAATAGTTTCCTTTGGGTATCCTATGAA
GACGCATTTTTCCGCTTTGGGTTCAAGCTTGTCCGGCTGTAACTTCTTTA
CATAGGCTTCGCAACCCCAAACTTTAAGGAACGACAATTTAGGTTTCTTC
CCAAACCATAATTCATACGGTGTCGTTTCAAAGGATTTAGATGGTGCCCT
ATTTAAAGTGAATGCGGCTGTTTCTAATGCATAACCCCAAAATGATAGCG
GTAAATCTGTAAGTGACATCATAGAACGAACCATATCTAAGATAGTTCGA
TTACGACGTTCGGACACACCATTACGCTGTGGTGTTCCCGGCGGTGTCAA
TTGTGAAAGTATTCCGCATTTCTTCAAATGCTCGCCAAACTCGTAACTTA
GATATTCACCTCCACGATCAGAATGTAGAAATTTAATCTTCTTGTTATGT
TGATTCTCCACCTCACTTTGAAATTCCTTAAACTTCTCGAAAGTTTCGGA
CTTATGTTTCATGAAATAGATATACCCATATCTACTCAAGTCATCCGTGA
AGGTAAGAACATAACGATAACCACCGCGCGATGCTACACTCACTGGACCA
CACACATCGGTATGTATGATTTCCAATAAGTCCGTAGCTCGCTCCATCAT
ACCAGAAAATGGAGTCTTAGTCATTTTACCCATCAGACATGCTTCGCATC
TCTCAAGTGATTCGAAATCAAGTGATTCAAGAAGTCCATCGGAATGGAGT
TTCTTTATACGCTTCACTCCAATGTGACCAAGACGACAGTGCCACATATA
GGTCGAGTTATCGCTCAATTTCAAACGTTTAGCCTCAATGTTATTAATAT
GTGTATTTCCACTATCGAGATTCAATAAGAATAGACCATATATCAAAGGT
GCATGTGCATAAAACATATTACTCATATAAATCGAACAACCATTATTCTC
GAACTTAAACAACTAACCGTCTCGAAATAAACAAGATCCTGATATAATGT
TCATGCTTAACGCAGGCACCAGATAACAATTATTTAAGTATAAAACTAAT
CCCGATGGTAGATGAAGAGGTAGCGTGCCGACCGCGATCACATCAACCTT
TGATCCGTTTCCCACGCGCATCGTCACCTCGTTCTTCGCTAGCTTCCGTT
TATTCTGCAGCACATGTTTCGAGTTACAAATATGAGCAACCGAACCAGTA
TCAAATACCCAGGCAGTACTACGAGTACTAGTGAGATACACATCAAATAA
CATGTATATCGGATATTCCTTTCTTCTTGATGTTGCCGTTCTTCAAATCC
GCCAAGTACTTTGGGAAATTCCGCTTCCACTGACCTTCTCCCTTGCAGTA
AAAGCACTCTGTATCAGGCTTAGGTCCAGCCTTGGTCTTCTTCGTCGATG
CGGTAACTTTCTTACAACCCTTCTTGAAGTGTCCCTTTTGCTTAGACTTG
CCTTTCTTGAATTTGGTGCTCTTTCTTGATCTCCACTTCTGTAGATTTTA
ACATGGAGAAGAGTTCTGGCAACTGCTTGTTCATGCTTTGCATATTGTAG
TTCATCACAAAGTTCTTGTAACTTGGTGGTAGTGATTGGAGGACACGGTA
AATCCCCAAAGCATTAGGAATCACTATACCCAAGCTTTGAAGTTTGTTTG
CGTGCCCAGACATCTTAAGCACATGCTCACTGACGGAGCTGCCCTCTTCC
ATCTTGCAGTTAAAGAACTTTTCAGAAGCCTCATAGCTCTCAACTGCCGC
GTGAGTCTCAAAGATCAATTTGAGTTCACGGACAATATCATGTGGGTCTG
AATTCTCAAACCTTTTCTGAAGCTCCGATTCTAAACCATACAAGATAGCA
CACTGAATTGTGGAGTACTGAGTCTTCCGAGCGAGGTAAACATTCTTTAC
TTCATCGATAGCAGTAGCTGCAGGCGGGTGACCCAGCGGTGCATCCAGCA
CATAGGTCAAATTACCAGCATTGAGGACAATCCTCAAATTGCGGAACCAA
TCCGCGAAGTTGCTTCCATTGTTTTTCAACTTTTCTTTCTCTAGGAATGT
ATTAAAATTGATGGTAGGGACCGCCATTGATCTTCAACATATTTGCAATA
GTTTAGACTAAGTTTATGACAAATTGAGTTCTAATTAATAGTTAAATTAA
TCTAGGTGAACTCCCACTCAAAACAATATCCCTCACATTGTTTTAGTGAT
CACACGAACCAAATACACCACATCAAAACCGATTATCACGAGAGTTGATG
TAGCTTCAATGGCGAACAATCGACATGTTCATCATATCTACTATATGATT
CATGCTTTACCTTTCGGTGATCCGTGTTCCGAGACCATGTCTGTACATGC
TAGGCTCGTCAAGATCAAACCTTAGCTTCCGCATGAGCAAATCTGGCTTG
CTCACGTTGTATACACTTGCAGAATCTAACACACCCGATCATCACGTGGT
GCTTAGAAACAACAAGCTTTAGCAACGGTGCTTACTAAGGATGAACACTT
TAGAACTTGAAATTTATGTGCATGAGGGGTCATCTTATAAAGCTACCATC
GTTAACTAAGCAATACAAGATGCATAAAGTATTAACATCACATGCAATTC
ATAATATGTGATATGATATGGCCTTTATTCTTTGTGCTTCCGATCTCCAT
CTTCAAGCACGAACATGATCTCCATCATCACCGGCATTGCATCAAGTTCA
ATGACGCTGCACCATGTTTGTCGTCCACCGGCTTCAACTATTACAACTAC
TTTGAATAGACACGCGGGTCTTAACATAAATTAAAGACAACCATATGGCT
CCTGCCGTTTGGCAACTTACAATAAGGAACATTGCATACATCAAATATAA
TCACAATCATGGCCATATCACATCACAGCACACCCCTGCAAAACAAAGTT
AGACGCCTCTAATTTCTTTGCATATTTTACGTGGTTTGGGGCTTTCAATA
AGTGTCGATCTAACTTACAAACAAGAACCACAACGTTGATGTTTGAAATA
TCAAGTGCCCGTTGTAAATTGGATCTATACTATAATGGGAGAGACAGACA
CCCGCAAAGCCACTTATGCAATACAAGTTGCATGTTGAGTGTGGAGCAAG
TCTCATGAACGATGTCATGTAAGGTTAGCCCGGGCCGCTTTATCCCATCA
TACCGCAAGATGCAAAGTACACAAGAAGCAATTGATAATAAAAGCACCAC
CGCCCACAATGACCATTGTGTTCTACTCGTGCAACAGATCTACATATAGA
CACGGCTCTGATACCACTGAAGGGGTTCGTAGCATGGAAAACAAAAAAAT
TCTACCGCATACAAACAAACAAGCCAAGATCTATCTACTAGATTGTAGCA
ACGAGTCGATGGAATAACTCACCCTCGAAGATTCCAAAGTGTTTAACGAG
AGCGGATTCTCGTGGGTGATGTAGTCGTACTCTTCCCTATCTCAAGATCG
CGTAGACGATCCTTTCGGCGCTGCGTTCCGGCAGCGCTTCCGCAGTCGGT
CACACGTTCGGTACTCGACGAAGACCTTCCTCTCCCTTGTTCCAGCAGGC
AGCGGAGGTTGTAACACTCTCCTCGCGATTCCGGCAGCACAACGGCGTGG
TACCGGAAGTAGAAGGGAAATCTCGCAGGCCTTCGCCTTAAGCCGGAGCG
AGTATGGTGGACTATGAGAGAGCCTCGGTGATCTAGGGTTTAGACGCACC
AAAGATAGGGAGCTAGGCCGGCGGTTAGGGCAAGGGGATTTCCCCAAGTC
GGCGGCTTGGGCAAGCCCTAGGGCGGCGGCGGCTATGGTGGCCGGCGGCG
GCTAGGGTTAGGGTTTAGAGGGGCAAGGTGTGTGTCTTGGAGGGGCAGCC
CTGCCCCTCCTTATATAGGTGGAGGGGGCACGCCAAGGGGAGGGGAGTCC
CTCCCCAACTCGGTCTCCAAGGGCCGGCGGTGGAGGGAGAGGAACTCCTC
CCCAAGTAGGTTTCCTACTCTCCCTCCACCAAACAAAATAGCCGTTTGAC
TTTTCAAATTGGCGTTTGACTTTTCAAACTAGGATTTGACTTATCCCTTT
ATTTTGTTCAGCGATGACACCTAGTACATGATGCAACCATCCCAACTTGT
TATGACACATTCATGTACCCTTCCTCTCCAGAGTGCCGGACATTCCGGAA
CCTTCTAGAACATTCCCGATGAAAACACCGGAACCATTCTCCAACCCCGA
AACATGACTTTCGTTATATAAATCTTATTCTACGGACCATTCCGGATATC
CTCGTGATATCCCGGATCCCATCCGAGACTCCGAACAACATTCGGTCTCT
TACTCATCATTCCATAACTACTCAAACAACGTCGAATCCTTAAGTGTGTC
TCCCTACGGTTCGTGAATTATGCGGACATGATCGAGACACTTCTCCAAAC
AATAACCAATAGAGGAATCTGGAAATTCATATGGCTCCCACATATTTCTA
CGATTACTTTGTGATCGAATGAACCACTTACATACGATACCAATTTCCCT
TTGTCTCACGATAGTTTACTTACCCGAGGTTTTGATCGTCAGTATCTCTG
CATACCTAGTTCAACCTCGTTACTGATAAGTACTCTTTTCTCGTTCCCGT
GATATGTGATCCCTTGTGAGACAGTCACATGCTTGCAAGCTAATTGGATG
ACATTCCACCGAGAGGGCCCAAAGTATATCTATCCTTCATATGGATGGAC
AAATCCCACTCTTGATCCATGTGTCTCAACCAATACTTTCCGAACACTCA
ATGCCACCTTTATATACACCCAATTACGGTGTGGTGTTTAATGTCATCAA
AGCATCCTTCCGGTGATGGTGATAAGCATGATCTCATGGTCGAAGGAATT
AGGTTACTATGTATCATAAAGCATATAGCAATTGAACTATTAAAATGACT
TGATCGTTATGCTACGCTTATCTATAGGAGTATGTACATCATACCATTCT
CCTAACAATATGATCTTGTTGTTAATAACATCTCAATGTTCATGATAGGG
AAACCACAATCATTTATTAACCAACAAGCTGGTATTATGAAGAGGCTTTA
CTAGGGACTCTAATTTAAGTTTACAAATCACACAAGTATTAATGTTTCCT
TGTTAATACTATTATAGCATGAATGTAAACATTTATCATAAACACAAAGA
TATAATAATAACTATATTTATTATTGCCTCTAGGGCATATCTCCAACAAT
AATGAAAGCTGTTAGCGAAATGGGAACTAAGAAAAAATCTGTCGTGTGTT
GTGTACACCATCTAGTGGTAAGATAGTACCCCCTGCTTTAACCTGGGTTT
ATTTTTTGTTCCTTTTATTGTTTCACTCACAGATTGTTTCATTTTTTATG
GGTTTTTTCTATGGAAAACATGTTAAATATGTAGATTCACTGGTCGTTGA
AATGCTTGTTCCAAATTGCAAAGTTCAGGCGGAGGCTTGGGACAGCAAGC
TCATAGGCAAGGTAGTTAAAGCTGACAAGAAGCCAGGTGGTGGGTTCGGG
CATCTCAAAGTGAAGCCTAGCGTCTTGCAAAAACCTGGCGGTGAACTATT
TGTGGGTTATGAAGAGACC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.