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GrainGenes Sequence Report: AA006149

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Sequence
AA006149
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA006149
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GTGAAAAAGCAAAACAAATCAGCGCCGTTAAGTAACGAATCGGCGACCGC
CGCATGGCCGTCGTCACATCGTGCTTCCGTTGCGCGACCGCCGCCGCGCT
CGCACTCCACCACCACCACCAACCGGCCTTCCTCGCCGTCCGCCTCCGCC
TCCCGCGCCACCGGATCCCGACGAAGAGGACCATGTCCTCCTCGTCGGCC
GCTGCCCTGGCCTCGCCGCACCAGGCCGGAGCGTGGTACGTGGTGCCGGA
CCTCAGCCTCCGGGACCACCGCTTCGCCATCCCGCTCGACCACTCCTCCG
CCGGCTCCCCCTCCATCACAGTATTCGCCCGCGAGGTCGTCGCAGGTGCA
CGAATCGCGCTTCTCCCCTCCCCTGCCCTCTCTCCCGCCACGCCGACCGC
GCGGGGCCTCTCTGCTCGCGGTCACGCTGTCACAGAGTTAGGGGATAAGA
TAGCCCTGCACATCCACTGCGGTATCGATCGATGAGTAGATTCGCTACTC
AAAACAGAGGCGAGCAAAATGTCGCTTGATCGCTTAATTGCGCTATTGCT
CTAGCCGGGACACAATCACTACAATGTGAGATTTATCTGAATTCGGTTTA
TACAAATTTGGAAGTAGGAAGAAGTCCATCCTCTGGTGCAACTGAAAGTT
GCAGAGATTGATGACCACTGACACCGTACATCATTAGTAGTGACGAGTAA
GCATTGATGTGTCAAGATAGCTTGTTTTAACGAGTCCTAGGTAAGGGTGC
TCCTGGTGTAATTGTAGAGATGATGTGCCAAGTGTAACAGACACTGATAA
ATTCGATGCACGGAATGGTTCAAATTATATTGGTGTGTTGAATTCAACGC
CGTAGACTTGGAGCACCGAGTGTTGGTTCCATGTTGGGGAGGGAGGGGGG
GGGGGGGGGGGGGGTGCTTTCTTAAGCTACTGCTTTTTCACATCTGTGAT
TGTCAATCTTACTGCCCCGAATCTACACGACTCTGTAAATGTGTCACTAC
AGCTGGAAAAGAAGAGGCGGCTTTGCCTTATTTGATGTATCTACAAGGGG
GGCCTGGATTCGAAAGTCCTCGTCCCATGGAAGCAAGTGGATGGGTAAAG
AAAGCGTGCGAAGAATACCGCGTGGTATTGCTGGATCAGGTGCTTTCCAA
ATTCTTTGATAGATGCTCTGTATACTCTTCATTTTCGTACCCTACTCTTC
TTCTGCTGACACCCTTTTAATTTGCAGCGGGGAACAGGACTGTCCACGCC
ATTGACAACATCTTCTCTTTCTCAAATAACATCGGCAGCAGAGCAGGTGG
ATTATTTAAAACATTTCAGGGCAGATAACATAGTTAAGGATGCAGAGTTT
ATTCGTCTGCATCTTGTACCAGATGCCAAGCCTTGGACAATTCTGGGACA
GGTATAGAGTATGTAACGTCATGTGACCTTGATGTACTTGTTCGTCTTGT
ATTTTTTTTATCTTTGTTAATGTAGCACTGTTATTTACGCTACCTACCCT
TTTTTTTTCTGTTACAGAGTTATGGTGGATTTTGTGCTGTTACATATTTG
AGTTTTGCTCCAGAGGGCCTGAAATCTGTCCTTTTAACTGGAGGGCTTCC
ACCACTCGGAAAGCCCTGCACTGCAGATACTGTGTATAGAGCCTGCTTTA
AGCAGGTTCAGCTACAAAACGAGAAGTACTATAAGAGGTATCCTCAAGAT
ATACAAGTCATTCATGAGGTTGTAAGATACTTAAGTGAATCTGAAGGTGG
AGGAGTAAGTCATTCTTACAGTGTAAATGTTTGGGCTTCCTTTCCTATGT
GAATCTGAAACTTGTACCTTATGCAACATATTTTTATCAGGTTCATCTTC
CATCAGGTGGCAGGTTAACTCCTAAGATGTTGCAGTGCCTTGGACTATCT
GGTTTAGGTTCTGGCGGAGGATTTGAAAGGCTGCATTATCTGTGAGAAAT
ACTTACATCATCTTCATGGCTTGGACAAAAGAATGCGATTTATCTGATAT
GTGCCACTCCTTCCTATTTTATCTGGGACAGACTCGAGAGGGTGTGGGAT
CCTATACTAGTTCCTGGCGCAAAAAAGAATATAAGCTATTACTTCTTGAA
AGAGGTACTCACTGTCACAATTCCTCCATAATATTGATCTTTAAAATTTA
GCATACAGTGGGCAATGTTTTATAGTTTTTCGTTTTTCCACTTCAGTGTT
TCTAATGGGTAGCCTAACATTATATTCTTCTGCAGTTTGAAATGTGGTTA
GGATTTGATCAAAATCCTCTTTATGCTCTCTTGCACGAGTCTATCTACTG
TGAGGTAACTTCTGGGACTTGTTATTACTGTTTAGATCGTACTGTAACAT
TACTGTGTTCCTCAAATCTAGCATTTTTCATGGATTCAGGGAGCTTCATC
AAATTGGTCAGCCGATAAGATTTCCAGTGAATTTGGAAGTTTATTTGATC
CTGTTAAGGCTACAGAAGAAGGCCGCCCTGTTTATCTTACTGGAGAGGTA
TGCCGAGATCCTTAAGAGAAGCATCATTCATGTCATGTTCCTTACTAAAT
TAGTAACCCATGAAGTAAATTACATACCGAAGTGTGGCAACTAGAAATTT
TAAAGTTGTGTTTTATTTTCTAAAAAGATCACCCCGACATTAAGTGTGGT
TGGCAATGTTCTTTTTTGAAAGGGATGGTATTCAGGAAATAACTCTTCTA
TTTTAGCTATTAATGTGAGTCCAACACTACCTTTTCAATACCTTGGTAAC
CTTTGGGTAAATCATGTTGAGACGGACTTATGCAATGATAGGAGAATACT
GCTTAGCAGCATCCTGTTAAGTACTGGGATAGCATAGCTAAGATTTGTTA
CACATTCCTAACCTGTATTCGCTTCCAAAATGCAGATGGTATTTCCGTGT
TTTTTCGAGCAGATCCATGCTTTACGACCCCTAAAGGAGGCTGCCCATTT
GTTAGCTGAGAAAGAGGACTGGCCTCCATTGTATGACATCAGCGCGTTGA
ACAACAATAAGGTTCGATCTTCTTCCTAAGATCATATAGTTCCATGTTAA
ATAAAAAGTGACTTGCAACTGCTTAGTTTCACAGTAGGTGTTTGGTGCGG
TGACTGCTGTTTCACCTTAAAATTTGTTTGTTTTCTTATTTCTCTTGGCA
TGTGTTAAATAAAATTTGACAGCATTGCTTACAATCTCTCTTAGCAAACA
AAATAAACCATATTTTTTCTGTAGGAGTAACTCTGTGGTATTGGTACCGC
CTGTTGGTTACCCGCTTGCACCACAACTCCATAAGGCTTTGTAGCGCTAG
AACTTGATTCTTGTATTCATCATTGCCTATGGCATGCTGCAGGTTCCGGT
GGCCGCCGCAGTGTACTACGAAGACATGTACGTCAACTTCAACATCGCCA
AGGAGACAGCCTCCCAGATTGCTGGGATCCGGATGTGGGTCACCAACGAG
TACATGCACTCTGGCCTCCGCGACAGCGGTTCCCATGTGTTCGAGCATCT
CATGGGTCTTTTGAAGGGCAAGAAGCCTCTGTTTTAGGCTTTAGCTCATC
GTATCCAGGTAAATTCGATATCCCCATCGTCTCCATAGCTGCTCTATATC
CATGACTTCAGAAATGAATAGCAACATGCTCCTGGTTAATAATTTTTAAA
GTTTGCTTGGGGTTCGGGACATACTTGCGGAAGTAGGAATTAAACTAGGT
TATTCAAAATTCGCCAAGTCCTGGAATTGGGACATCACTTGTCAGCCTGA
ATAAATAACTTCCGGACAAAGAGGACGAATAAAAAATAATTAGGATCTTT
CTAGTCTTCAGATTGCTTATCAGACAAGTCTAGACCTCATCTATACTTAC
AGTCTGAAGCACAGTTTACTACTCTCAAATACAAATGCTTATTGAAGCTC
AAATCCTCAAACCCTCTTCACTTTGACTTTTAAGCATATCCGGAGTAAAG
GAGGTAATAAAGGATGAAGAGGAAAATGCTTATTTTCCACTTGCTCCGAG
TTGGTTTGCATATATGAAATCCAACAAATATGTGTTGCTAATCTACTGCC
ACTAACAAAAATGCATCGGCAGCGTGCCCGTCACTGGGAGTAACCTCCGT
CAATACTACAGGTATATATGCATGTCAAATCTGTTAGTCTACATAGTAAG
TTGAATAAGCCTCACCTAAACTAGCTAGGTAATGGCCCTGATGAATGTGG
AAGCCGGGGACTGATGAATGCGGAAGCCAGGGACACAGAGATTTTTACGT
GATAATGACAAAGTATGTATGAACAAAACAAACGATTTGGGTGCTCCCAA
GTTGAGTTTGTCCATTTGCACTTTTGTTTCAACTATCTTCAACAAACAAT
AATACTTTTCATGTGCTATGACATGTCAAAGGAATTGGACACACTAGCTC
CTCCAAGAAAACCACTACACGTCATAAGCATTTTATAATATGCAGAAATG
CCAAATTGAGCTCAGCCTCTAGGGGGGCGGAGCTTTTCGAATTCAACAAT
GGATTTTAAAGACTTCAAAAAACTATAACAAACCCTATATGTACATAAAG
ATGCATTATACAATTGTGTATAATTTCAGTAAGATATACTAAATACTAAA
TTTGGATGAGTCTAGATACTAAATAGTGTCTAGATACATCTAAATTTAGA
AAAAATTGCGACATCTATTTTGAGACGGAGGGCGTACATTATACTCAAGG
CTACATAAAAACCTATATGTACATAAATTTCTGTGCGCACATGGTTTTAT
ATTTTTAAGACTTTGAAATACCATTTTCGAATTTTCCAAAATATCAGGCT
CCATGGAGCCTGAGCTCCAAAGCACTGCAGTACTTTATATTACTTTATAT
TTTTTTATATATAGAGAGAGAGACATGAATCAGAGTTACAAAGGGTAGAC
ACGTAATGGTGAAGTTCATCACCCGCTCTCAGCATGCCGAGGTAGTTCCA
CCAGCACAGTCAACACCGTGCGAGACCAAGATCCTCTCCATCGTCAACGA
TTGTCATGACCTTCTCTTCAATCGAGTTCTGTTGATGCCCCGGCCTTCCA
ATGACGACGCCAACAAAAACCATCAAGGCGACGCTCGTAGAGGCTGTAGT
GTACAATTACCATACCATGGGCCAGCTGAGGGAGGTATATGTTGTGGGAG
GGCCCACAACCTACTCCAAAGACGTAAAGCTCATATATGGCATACTCCCT
CCGTTCTGATTTACTCTATGTCCTAGAAAAAATCAGACAAATTAGTGTTG
CATTTATTAGTACTACTTAGATATCTGAACAACCAATCAAAGCTACCTTG
AAAATAACAACATCCAATAGAGAGAGCATGACCACTTTGTTTTTTATGTT
TTTATTGACTAAAAGCTAGAATGTAGATTATTTCAGAACAAATTTTAGAG
CTAGAATGTAGACTATTTCAGAACGGAGGGAGTATTACATAACTCTTTCG
AGGCTCACATGAGAATGTATGCTGAATGTTTCACCAAATGAGCAAACATG
AGAAATGTGGAAACGTCGTTGATCGGACCCCTTGGGTCCAGTGGCTAGTT
GGACCCCGTAGGCCGTAGGCTTCAGAACTCAAGGTCAAGCCAGGATGTCT
TACGCAGTGAGAACCTCAAGGCAAGATCATGAGAATGCATCTGGCTTATG
CATTATCTACAACAAATCGTCAGCAATCTTGATAAGAGGAGATGAGGAAG
AAATTCAAAGGGTATCCTCGGTCCCGCAATGCCCTTTGGGATCCTTACCA
TGCAAATACTTAGGCTCCAGCTTATGCAATGATTGATTGAGCTATTCACA
TCCTTCCTTTTTGACAACGAGGACTCCTCACGCAGTCTGCTCTCAGCAAG
ACCAATTCATCACCTACTGGTCACTGGAGCCCCCAAATGGGTTCTTGAAG
TTATTGAGGAAAGTCTACGTGTATACTTTTGGGGAGGAACTGAGACGGTT
CAAGGTGGTCAATGCTTGGTGGCCTGGAAGACTATTTGATACCCCAAAAG
CTTCCATGGCTTGGGCATGAGAGACCTGGAGTGGCAGGGGCTTGCATGCC
TATAAGGTGGGAATGGTTAAAAAGAGCTGATCCAACAAGACCATGGCAGG
GGTTCCTTCTCGTCAATGGCACAAGCTTGTATTGTGTTTGACAGCTTGGT
TCAAATCGAGATGGGCGACAGTGGTAAGGTCCTGTTCTGGAGAGATAGGT
ACGTGCTGCACACTACACCAGTAGACAACGAAAATGAAAGGAACAATCTC
CCGGAAGAACCAAGTTATATTGTATTAATTCAGTAAAAAGTTATATTGTA
TTTATGTTCAACATTTCCCAATAACAATGTATACAATAGATTTTGAGCGT
GCAACACACATTTTATAAGACAAGTGAATGAACACAGGAAGAGGAGCAAA
CACTAACTACCGATGCATTTACGATGTATCAGCAACAAATTCTTGTATCA
CGATCCGTACTGCAACTGGAATTCGCACCGAGTGGACACCTCCATCAGAC
CAGGTCAGGCTCCCAAAAGTGTAACCCCCTTGCACTGTCTGCTTTGCTGT
GAGCGTGACCCTAAATGTCGCGCTTCTGCTACCACTACCTTCAGCGAAAG
TGATCACGGGTGGCTCCACCGACATGGTTACCCCTGGCGGAGCATCAACA
GCTGCTCGGTAAGTTGCTTCCACTGGGCCAACATTTGTGACAGTGCGCAT
GACTGTGACAGGGTCCTCGAGGTTTGGTATGGAGATCGACGGGAGGTTGA
GATTAAGTTGGTAGGATTCGCAGTCACTAAGCAATCCAATTGTGCAGTTG
AAGAGCTTATTGTACTCTCTCGCATCCACATCGCAAACCAAGCCGGGGTC
AGCGGCTCTTTCCGGGTTCATGTGGCCACCGCCAAAGTCAAAGGGGTCAG
CTTGTTTCCTTGGGACCCCCTCGGCTTGAATCAACATACCTAAATGATCG
GTCATGGAAGCTGGGGCCGTTGAAGAGAAATGATTGAGTTAATCATGCAA
GGAAATTTGAGTTATTTAAAAGCAATTTTGCTAATCTCCTGTGTGTACCT
GTGGTGACGATAGCAGACTTGATCATAGCAGGTGACCAGTCGGGGTGAAT
AGACTTGAGCAGCGCGGTGACCGCTGAGACATGTGGACATGCCATGGAAG
TTCCGGATGCCAACACGTAGGAGCCACCCATAGCCGCCAAGATGCTGACT
CCTGTTGCAGCTACATCAGGCTGTTCAAAACATGCATAGAGACACAAGTC
TTCATTTACTCATACATTTAATGGGGCTAGGTACTGCAAATGTGTGTCAT
ATGTATTATCGAAATAAGAAATACCCATGTTATTCCTTCTTATAAGTTTG
ACTTAAGTCGAAGATCTTTATGTTTGAGTTTGTCAGTAGGAAAAATATCA
ACATCTACAGATCTACTATACGAAATTAGTATCAATAATTTCATCTTGAA
GTACTATCCATAGCATAAAACTGATAAAACTCTGACTTGCTTCAAAACCT
TGAGTATAGTGGGAAACAGGGTGCTGGGGCCTCTCGATGAGAAATAGGCG
ACCCTTGGCGCCAACACCTCCTTCCCTACAACGCTCACAGTAGGTGACAC
CTTCACCACCGGATTCCTAGCATTGCCATGAGATGGACATGAGTTCTTGG
ATGGACAAGAAAAAAAGAGGTATCTGCCTGGTTTCGGATGGCCAATTGCA
GTGCTCTCACCCTGTGACATCCATATAGGAAAGAATTCTCTGCGCGATCT
CGAAATCCACGAGCACACACGGCATAATACCCTCGCACACTGCCAGGCTG
GTTAGGCTGTTCTCAGCGTTCTGTGCGAAGATGAGGCCCTCCGCGCCAGC
CTCCGTCGTGAGGTTGATGGCATCACGGAGCGCTACCCGAGGTGGCCTGA
CAGACGCCATCTCCGGTGCGTAGCACAGCACAATTTTACCGGTGACGTTT
CTGGAGGCCAGTGTCTTCACATCGCAGCTGCATGCGCATGTGAATGTATC
AGGTTCAATTTCATCCAGAATCACAGAATCATAACTAGGCAAAAAATAAT
GTGGGAGAAGAGCAAATATGTCAAGTGGCTGGCTGCTTTATTTCATTACC
TCCTGGCATAGACAAGGGCCTTAAAGTCTCCACTGATCACAGATGCGTTG
AGATTGCCCCTGCGTTTCAAATAAAACACGAAATATCTCACTTCGTTTCT
TTTTTCCGAACCGGAGTTTCCCCACGAAAGAGCAACCTTTGAACGTGAAA
TTATATCTGAAAACATATGGATTAAAATGACATAAATTCTTTTTGGTGTG
TGTGTGGGGTGGGGGGGGGGGGAGGGGGGTTCATGTGAGTGATCATAAAA
CCTGTTTTTAGGCTAACTTATTTGATTGCACACCCTAAAGAAAAGAATGT
TCATACATACCACCAGCTTTCATTGTTCCCTAGCGTCATTACGGTCGGGA
AAGACCGGTCCATGGTGCTAGCAGCCACGGTCGTGACCCACGGCACGGCA
TTTGACACTGTGGAAGGCACGGGGCCATCGTTCCCGCCTGCAAAGACGAC
GGAGATGCCTCTCAACACAGCATGCAACGTCCCGAAGATCTCCTCGACGG
CACCGCCTCCCAGTGAAAGCGATAGGACGTCCACTCCATCTTCTATTGCA
TCATCAATGGCCGCGAGAATTGCCACCTCAGGGCATCTCCCGCCCACCCA
GCACACCTTGTAGATACCCAGTCTAGACCGTGGCGCCCCGCCACGTGCCA
CGCCGGCGCCAAGGCCGCCCCCTTTGTGGCTCATGTTCCAAACCTGCCTG
CCGGCAATCGTCGAGGCGACGTGTGTGCCGTGGCCGCTGAGGTCCCTAGG
TGACATGTAGTCACTCTTGAGCTCCTCATCACTGACGCCACCGCTGTACC
ACCGGGCGCCGATGATCTTCCTGTTGCAACTTGTGGCGTCCCACGCCTGG
CCAGCCTGGCATATGCCCTTCCACCGTGCAGGCACGGGGCTGTAACCGGA
GTCGTCAAAGCTTCGGGATTCAGGCCATATGCCTGCAGCAGAAACATGGA
ATCGATTCAGTTGACGATGATGTTCATCATGATCCTATTCTTGGGTTTTT
TTGTGTGTGTTCTGGATCTGTGAATGGCGATTTATTATTTATTTAGACGT
GTCATTGCAAATTAACCTGAATCGATGACCCTGATGATGACATCTTCGCC
GTACTTTGCTTTTTGCAGAAGGCCCTGCTGCTGTGATGGTTGGAGGTCAT
AATTCAGGCCGAGGAAGTCCCAGCTCTGAGTCGTGTGCGCTTCGTGATAA
GTGTTAGGCTTCACACTGAGAACTTCGGGGAATTCTGCACTTGGAACATG
TTCATTAGCGCCAGCCTATCATGAAAATTTTAAGACAGCTCTCAAATTTT
GTTTCAACTGAACCCCTTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.