Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA007175

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Sequence	AA007175
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA007175
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	GGCAATCGATCATGGCGGCGTGCCTAGAGAAGGAGGACGAGGAGGGCTTC ATCGGCCTCGGCGGCGACTTGGAGACCATGGCGTGCGTAGAGGAGGATGA GGGCTTCTTCATGCCGCCTTTCCTGTGCGAAGACGAGGAGGAGACTGCGC TGTTGGAGGCGGTCGATGCAGAGCTTCTGCGTCGGGAGGCGGAGCAGGCC AGGGAGGAGGAGGAGAGACGGCGGCGAGGTGTGGCGCACCAGGCCGTCCT TGACTCCATCCTCGAGTGCGACCCCAAGACGGGGAGGGAGGTCTACACCC GCTACTCCTTCACAGACTTCTCCATCTTCGACATCGACGAGGAGTGTAAG TCTTCTTCATCGCCGCCGATCTTGCTTGGTTGCAGCTTGTTGCTTGATTA TTGTTCGTCGATCGTCAACGTGACCTTGCGTCCATGGCGTGTACGTAGAG GTCTAGAGGAGCAGGACGTCTAGCTACACGTATTTGAACAGAAGTAACTA CAATGTGTAGATTTCCCCCGTTGAGAATTGTTTTTTTGTGTCCAATGCAT CTCAATTTTTTTTTTTGATTTCTTGATTGTTGTACCTGCTGAGAATCTTA CCTGTTAAATTCAATCGGTGTTCATTATGAAACCTGACTACTGCAAAAGT TAACAAAAAATATTGTTCTTATGAGGTCTGGTTATATAGTATCCCTTTCA CCCCACACTTTTTTTTCGCATAAACCATAGTATGTGCTATCACCATCATA GAGTGGTTTGTGTTGTCTAAGTGAAATAAAAATGTACTATTGCTTTGTAG AGGAACAAACATGGTGTGAGAACTGAAGTTCTTACAAAATGAACATAAAT ATTGCGTGCACATGCACATACATGAATTGCATGCACCCATCCACTACATT GTACATCAATTATGCAGCTTCGCTTTATGTTCAATTGAGTCATGGTTCAA CCGATTAGCTTTCGTATGTTTTACTAATCTTCTCGTGCTGCTGCGATATG GTTTTGCTTCTGCATCTTGATTTTTCCATGGTCTATCACAATAATAGTTT ATTTTCCATTGCAGCGCTTATCCCTCCAATGCGATTTACCAACACTGGGT ACATACATGGCTTGAACCTAGAAGACTCTGCAAACATACATTCAGTCAAG TTAGTCTTCTCAGATAGAGGATTCCCTATCAATGTGTATGGCACGATCAT CGTCAGAGACAGTGTTGACCATAAGTGTATATATATTTTTAACCGCCATA GGGAGGATTGCCAGACTATCAACTCAGAGGTACGTCTTAGCTGCAAAACC ACTACTCTAGTACCAGTTGGATGTTGTCAAGAGATGTACATCTTGACTAT GTTTACTTTGTAATGACTCTATTGCTTATTTTTCTACATGCTCTGGTGGT ATTTAGCTGAGCATCCTCTAATCTTTGGCAACTTTATTGTAGGAAGAAAG TTTGATCCTGACCGGCCCAGGTCGAGGCCTAGTATTACTTGACTTCATAT ATCTAGAGATGAATCTTAAAATCAAGGCTGATGAAGAGCCTCAAGACCAA CAAATCAGCAAGGGCTTACTTGGCATCGACGGACGGGTTCAAGGTAGAGA TGAGATGATCAATGTTGGAAGTCAAACCCTTAAGAGCTGGCTTAGTTTTG TGGAAGTGTGTTACACAACTGTTCTAAATGCCGTCGAGGGTACCTTCGAG ATCGAGTTGCTAGAGGGGCATTTCTGTGGAAAGATCAAAGCTGGCATCGA GGGCGTCAAGGAAAAGATTGTGATTCATAATAGCGAGGAAGATGGTGTGG TGACTTCTTCTGGTGATAGAACAGTTATCAAGCTACAACGTTGTGTCTTG ACCATCTGCCTAGGCAAAATACTCACGTTTGAGTTAACCAGTAAAGGTTG TAGTCTCTGTGGTTGCGTTGGTGCTCCTCATTCTACTAGTGAATGGAGCG TTGAATTCCCACCACAACGTCGTGGTCAAGAGGTAGCAGAAGTAAGTTGT GGTTCTGGTAAGCTTCTAGTGAAGGTCGTCTGGTCCCTAATGGACATATT AGGACGTAGTAGCTACTAAGGGTTTTGCGTGTGTGCGTGCGTGTGTGTGT GTTACCGCAACGAATCTAAGGTTTTGTGATACAAACAAAATTGATCAACT TTTGTGGTTCACATACATTTTGTTGAGTGGCATGCATTGAGGCATGGAGT ACATGCTGGTTATTTCCATCATTTTATTTCACCTTTCTTAGTGTGCACAT TGTTTTGCTTCGGAAATGGCAATGGCGTACATTGATTCTGAGTACACTAT TGAGTGGTAGCATGCATTCGAGAAACTCAGATTTAAGGTAAAGAAACAAA AAAATTTGAAGCTCCATTTCATGCCTGCAACAAGTTACATGTACTTTGGG CTCATTGCCAAAGGATTTCATCAATTTACATGTTTTGGACCAGTTCTCAC AACATTATGGCACGCAGCATCACACTGAACATGGCAAAAAACGCACGGAA ACACACAATATAAAGTTCCAAAAACAACCACATTGCAGTTTTTGCATCCT CTCAAACAAACCAGCTGACCATGAGCATATTTTTTTATTGTCCAGTCTGA CCAAGAACCGAGTGTGTAGTCTTTGTTTTTTTTAAAACAAGCGGGGCTCT TTTTGTTCAAAACAAATAGGGCTTGAACTAAGCCGCCTAGCATGTATGTT TTTACACATCATCATGCATCCTGTTAGGATATACTGTATTTTTTACGGTG TAGAATACTTGTGTCTTTGCATCCAAAATGTATTTTGCTCTGTCTTCATA ATGAGCAACAACAGAGCAGCTACAAAATTTAAACCTTATAGTACAAATTG TTAAAAGGTGCTCCGTGAGATGAACTACATGTGAAGAATTAGAACTTGGC ACTACAGTTACATGACAGTATCCAACTTCTGAATTACAGAATGAGTACCC AACAAGTGCAAGTCGAAGATATGCCTGACCTTCTTTACTGTTCAATGGCA AGGGAAGGTGTGAGGGAGATCCTATAATGGCAAGGCATTAATTTTTACTT TGCACATCCACCAAACTAGTGTACATAAAGCCCAATATATGCTGATAAGT TTTTTTTTCGAAAAGGGGAAGAAAGCCCAATATATACTGATAAGTGATGA CAACAAGCTCGAGAGAGCTATATAAGCTATATACCAATATAAACACAAAG TATAATAACTACAAGGAGTGATCGTGCGCACAAAGCAAATATGAATATTG AACTGATTCTGCAGTTCAGGGATGCTCCCTATGTTCAATTAAGTGTTGTT TTAGATGATACTCTACATTTATGTATGTTTTACTAACCTTCTTGTGTTAT TGCGATTTTTTTCTATGTCTTGTTTTTTTGGACAATCACAATAATTGTTT CTTTTGGTTTTCCGTTGCAGCGCTTATCCCTCCATTACGATTTACCAAGA CATGGTATTTAAGTGGCTTGAACTTAGTAGACTCCACAAGCATAATTTCG GTCAAGATAGTCTCTAACATATACTTCCCCATCTATGTGTATGACACTAT CATCGCGAGAAATAGCGTCGACCATATGAGTATATATCTTTTTAAACGCC ATAGGATGATTACTAGACTATCAACTTAGAGGTCCGTCTTCACTTCAGAA TAAACTAGATGGTTGTTCTCAAGAGATGTGTTTCTTTATTTATAACTCTA CTGCATATTTTGGTGCACTCTCTAGTGGTATTCAGGTGAACATTCTCTGA TCACACATTTTTTTAGTGGAAGCTGATCGTACATTAGCGGTAAAGTAAAC AGCCACCAAACTTACCATGGGCCGGCCCATATCGACTCTGGCTGAGGCGG CGTGAGTCACGCGTGCCGTGTCTAGTGGTAGCGGCCGATATCACCTCCAG AAAAAAGTCACCCTTAGCCCCGCTTGGTAGGGTGTCAAATGGGATCCCGT CGCTCTCAAAAAAAAAAATGGGATCCCATCAAAATCCCACTTGTAGTTCA TTTGTTAAAATCTAGTTTAAATTTTTGCTTAAAATTTACACTAGATTTTG ACAAATGAACTAGAAATGGGACGGGATCCCACTTGACACCCTACCGTTTC GGACGTCTGTTTCATTTTCGGTTCAGGGATTTGGACGTGTACATGTATTT CCGGCTTCGGTTTGTTTTTGGACGGATTTAGACGTGCACATAGTCCATCG AGCATATTTTAAAATACAACATACACCAGCATTCAAAGTTAACTTGCATA AAAACATCTCATGTCATATTTTAACAGTTATTTATAAGGAAAATGATAGC TATCATCCGGACGATGCCATCGTCCGGGTTGACCGCACGCTCCACGCGAC CGGGCCCCACCTTATCTCTTCCCTTTTTTCTTCCCCTTTTCTGTGTGAAA CCGTCGCTGCCTTGCGCCGCTACCCACCACTGCCGCTTGCCGCCGCTCCC GCACTCGTCGCCGCCGCCCGCTGCCGGCCGACACTGCCCTCCGGAATCTC TTCGCAGCAGACATGTCCGCCACCGCCGTCGCGCGCCCAAGCCCATGCTG CTCCCAGCCACGAGCACTCGCCTCCCCCGTCGCCGGCAGGAGCAACAAGG GGAGGCCGCCCTGGGCCTGGCACCTCACGCCGGCTGTGAGCCCCGCGAGG CAGGTGCAACAAGGGGAGGACGCCATGGATGCGGAGGCTAGGACGATGAT TGAGAACAGGGGCGAGATAAAAGGCCATGGATGGGGGATGAAGGTTCTGC CACGGGGAGATGCTACTGACGACGGGCGACTTTGCTCCCGACAGCGGACG GTGTTGCTACCGAAGACAGACGGAGTTGCTACAGGCGGTTCCGACAGTGC GGGTCGTGTTTGTGGATTTGCTGCCTAACTATATTTTTTTGTACCTCTGT TTTTTTGTTTTGCTACAATACCATAAAAAATTTGCTACAAGTTCTCCGAC GAGGTCTTCCGGCTAAATTCTCCGGCGATGTCTCCGGCGAAGTAGGTTTT TTGCTACGTTAGAAGAAATTTGTTGCTACAGCCGTCTTGTGGTTTTGCTA CAATAGTGTCAATTATTTGCTACAAGGTCTCCGGCGAGAATCACCAGCGA GTTTTCCGACGATGTCTTCGGCGAAGTCGGTTTTGCTACATTAGCACAAC TTTTTGCTGCATGGTCTCCGGCGAGGTCTCCGGCGAGACGTTATATTTCT AAAACGAACCGTTTTTTTTGCTTCGGAAGCAAAAGCAGGGACATATATAG CAAACGCGGGATTTTTTGCAGCAAATAGACACGTGTCATCGTGGGAAGCA GGACGATGGGAACTCCCCATCGTCCGGGGGACGCATAGCACTTGCCTATT TATAAATAAAAGCTTCAAGTTTTTTCAGATCAACAACAAAGTATATTACT TAAATTATAAATAATAGCCGTTCAACAGACTTGAACTCAGATGGATTTCT AAAGACTTGAACTTGCATGGACTTCTAAAGACTTTTTGAGATTGATAAGA AAGACTCCTTCCACTAGCACTCATTCTTTCAACTTCACTCAACCTGTTTT GCCCTTCATCCTCAAGTGTGTCATTGTTTGTCCTTTGACTTGTCATAGCA CTAATTTTTGGAGCCACATTTCTACTAGTGCTCCGCCTCTCATCACTTTG ATGTTTCCTACTAGTGATATATGGAGGTTGGCTAGAAGTCATGCAATGTT TTCCTTGAGCAATATTACCTTCATAAAGCAAATCCAAAATCCAGTGCATC AAACAAAGGGAACTCCTTGCCGGACTCGCCGCTCTGCTCCACCGAAGCTC GTCGCAGATCTTGCGCCTCTCTGCCGGACTTGCCGCTGCCACCACCGCCA GCAGTTCGGCAAGCTCACGCCGCCCCGTCAGTCGCCGCCGCGCTAGGGTG AGCGAGTATCGTGACCCGGCTCTCGTCTGGTGTTGGGATGAAAATAAAAC CCACCTCGGCACGTCAGTGTCATTTTCCCATGTGAATGGGCCGGAAATAA TTTGGACCACGAAAAAAACGTCCAACCAAGTGACAATACTGATGTTGGGC AGTAAATTTAACGGCTCCGACTAAAACTGGTGTTTTGGGCTAAAATACAG TGAACCAAGCGGGGCCTTAAAGCTGTGTTGTGCGGAGCGCCACGCACACG CTTTCTTGCACGCGGTGGTCTGTTGGCCGCAGCCCATCAAGTGTTTATTT TTTTCATATTTTTTTCATGTTTTCCTTTGTACAATTTTTTCATGATTCAT TTATGTTTTTAAAAATCGGATATAATTGTCAGAATATTGTTTAAAATTTG AACATATTTAAAATTTGAGTATTATTTAACTTTATCTGTTTGAGTCTGAA ATAGTTTTAAAGGGTAAAAAAATCAAAATCTGAACAATTTTCTATTTGAA CAAGTTCTAAATTTGAACAATTTTTAAATGTGATTATTTTTTAAAATATA AATAATTTCAACTTTGAAAAATTTTCAAATTCGTACTATTTTTCAAATTT GAAGAAAATAGTATATAGGGTTCTCGCTCCCGAAGAATGTAGTTGCATTA CTCCCTTTTTGCCTTTTGTTTTCGGAGACGCCCTTGTACAGGTACAGCGA GAGAAATATATACAAAGATGAAAGCCCATCCAAAGCAGAACCAACTCGAA TATCCCCTTGGGCCTCAGCGTGTTCTAAAGAAGCAGCGCTAGGAATCAGA ATCGGATTCAGAATCAGTACGTAGAAGAAACGACCTCGATCCGCTCAAAA GAACAGCTCCATCGGCCTCGATCCGCTCACAAAAACAAAAAGAACGCTCC ATTGGCCTCGGCGGCGGTGACTTGGCAATCGATCATGGCGGCGTGCGTAG AGGAGGAGGAGGAGGAGGAGGAGGTGGGCTTCTTCATGCCGCCTTTCCTG CGCCAAGACGAGGCGGAGATTGCGCAGATAAAGGCAGGGACTGCAGCGCG TCTGCGTCGGGAGGCGGAGCAGGCGAGGAAGGAGGACGAGAGACGGCGGC GAGGCGCGGCGCACCACGCCGTCCTTGACTCCATACTCGAGCGGGACCCC AAGACGGGGCGGGAGGTCTACACCCGCTACTCCTTCACCGACTTCTCCAT CTTCGACATCGATGAGGAGTGTAAGTCGTCTTCGTCACCGCCGATCTTGT TGGTTGCAGCTTGTTGCTTGATTGTTTGTCGTCAACCTGACCTTGCTTGA CGTCCACTGCACTGTGTGCTTCGGATGCTACTTATGATCAATTGGTTCAT GGTTCAACTGAGATAGCTACCAGTCATCTACCAATATCTATGTTTCACTA ACCTTCTCGTGCTAGCTGCTACGATATGGTTCTGTTTCAACATCTTGATT TTTCCGTACTATCACAATAACAGTTTTTTTTTTGCCATTGCAGCCCTTAT ACCTCCAATGCGATTTACCAACACTGGGTACATACGTGGCTTGAACCTAG AAGACTCTGCAAACATACATTCGGTCAACATAGTATCCTCAGATAGAGGC TTCCCTATCAATGTGTATGGCACTATCATCGTCAGAGACAGCATTGACCA TAAGTGTATATATATATTTAACCGCCAGAGGGAGGATTGCCAGACTATCA ACTCAGAGGTACGCTCTTTGCTGCAAAACCACTACTCAATTACTAGTTGG ATGTTGTCAAGAGATGTGTACCTTGACTCTTTTTTACTTTGTAACTCTAT TGCACATTTTGTTGCATGCTATGGTGGTATTTACCCGAGCATCCTCTAAT CTTTGGCGACCTTACCGTAGAAGGAAAGTTTGATTTTGACCGGCCCAGAT CGAGGCCTAGTGTTACTTGACTTCATATATCTAGAGGCAAATCTTAAAAT CAAGGTTGATGGAGAGCCTCAAGACCAGCAAATCAGCAAGGGCTTACTTA GCATCGACGGACGAGTTCAGCCTGGAGATGAGAAGATCAATGTTGGAAGT CAAACCCTTAAGAGCTGGCTTAGTTTTGTGGAAGTGCGTTACACAACTGT TCTAAATGCCGTCGAGGGTACCTTTGAGATCGAGCTGCTAGAGGGGCATT TCTGTGGAGAGATCAAAGCTGGAATCGAGGGCGTCGAGGATAAGATTGTG ATTCATAATAGCGAGGAAGATGGTGTGGTGACTTCTTCTGATGATAGAAC AGTTATCAAGCTACAACGGCGTGTCTTGACCATCTGCCTAGGCAGAATGC TCACGTTTGAGTTAACTAGTAAAGGTTGTAGTCTCTGTGGTTGCGTTGGT GCTCCTGATGCTACTGGTGAACGGAGCGTTGAATTCCCACCACAACGTTG TGGTCAAGAGGTAGCAGGAGTAAGTTGCGGTGCTGGTAAGCTTCTAGTGA AGGTCGTCTGGTCTCTAATGGACATATTTGGCCGTAGTAGCTACTGAGGG TTTTGCGTGTGTGCGTGTGTGTTTGTTTACCGCAACAAATCTTAGGTTTT GTGATACTAACAAAATTGATCAACTTTTGTGGTTCACATATTTTTTTGAT CAACTTTTATACTAACATATATTGCGCACCAGGCCGTCCTTGACTCCATC CTCGAGTGCGACCCCAAGACGGGGAGGGAGGTCTACACCCGCTACTCCTT CACAGACTTCTCCATCTTCGACATCGACGAGGAGTGTAAGTCTTCTTCAT CACAGCCGATCTTAGTTGGTTGCAGCTTGTTGCTTGATTATTGTTCGTCG ATCGTCACGTGACCTTGCGTCCATGGCGTACGTACGTAGAGGTCTAGACT CTAGAGGAGCAGGACCTCTAGCAGCATGGCCGCCCACCGACGGTAGTACC TGTACCCTTCTCCGGTAGCATCACCACACGCAGATTTGACCACACGTCTA TGTTAGCACCGATGGCAGCACCTCCGCCCTCCACCGGCAGCACCGCCGTC ACCGATGGTAGCACCGGCACCCTTGCGTCCATGGCGTACGTACTTACAGG ACTAGAGATCTAGAGGAGCAGGACGTCTAGCTACACCCTTTTTTTTTTGG GAAAGGGCGTCTAATACTATTTGAACAGAGGAAGTAACTATAACAATACT ATTGAAAATTTTCCCATTGAGAATTTGTTTTTTTTGTGTGTGTGTAATGC ATCTCTACTTTTTTTGCGCCCAAGGTAAATCTTCTATTTTCAATATGTTA ATTGAAAAAATTGTACTACCTGCTGACTCTTAGCTGTTAAATTCAATCAG TTTCCATTAATGAAACCTGATTACTGCAAAAGTTAACAAAAACTATTGTT CTTATGATGTTTTTTTTAGATAATATTCTCTTCTCCCCACGCTCATGTTT TTTGCATACTCCCTCCGTCTCAAAATAGATGTCTTAAATTTGTTAAAATT TAAATAAATCTAGACATTATTTTATATATAGATTCATTCAAATTTTAAAA ACCAGAGACATCTATTTTCTATTTTGAGACGGAGAGAGTACATGAATTGC ATGCACCCATCCACTACAGTGTACATCGATTATACAGCTTCAGATGCTAG CTATTTATGTTCAATTCAGTCATGGTTCAACCGATTAGCTAGCAGTCCAA ATGTTCTAGTAACTTTCTGGTGCCGATGCGATATGGTTTTGTTTCTACGT CTAGATTTTTCCGTAGTCTATCACAATAACTGTTTTTTTTCATTGTAGCA CATATCCCTCCAATGCGATTTACCAACACTGGCTATGTACGTGGCTTGAG CCTAGAAGACTCTGCAAATATACATTCGGTCAAGATAGTCTTCTCGGATA GAGGATTCCCTATCAATGTGTATGGCACGATCATCGTTAGAGACAGCGTT GACCATAAGTGTATATATATTTTTAATCGCAACAGGGAGGATTGCCAGAC TATCAACTCAGAGGTACCTCTTTGCTACAAAACCACTACTCTAGTACTAG TTGGATGTTGTTAAGAGATGTTCATCTTGACTCTATTTTACTTGGTACCT CTATTGCATATTCTATTGCACGCTCTGGTGGTATTTATCTCAGCATCCTC TAATCGTTGGTGACTTTATTCGTAGGAAGAAAGTTTGATTTTGACCGGCC CAGATCGAGGTCTGGTGTTACTTGACTTCATATATATAGAGATGAATCTT AAAATCAAGGTTGATGAAGAGTCTCAAGACCAGCAAATCAGCAAGGGCTT ACTTGGCATCGACGGACGGGTTCAAGCTGGAGATGACAAGATCAATGTTG GAAGTCAAACCCTAAAGAGCTGGCTTAGTTTTGTGGAAGTGTGTTACACA ACTATTCTAAATGCCGTCGAGGGTACCTTCGAGATCGAGTTGCTAGAGGG ACATTTCTGTGGAGAGATCAAAGCTGGCATCGAGGGCATTGAGGATAAGA TTGTGATTCATAATAGCGAGGAAGATGGCGTGGTGACTTCTTCTGAAGTT AGAACAGTTATCAAGCTACAACGTCGTGTCTTGACCATCTGCCTAGGCAG AATGCTCACGTTTGAGTTAACTAGTAAAGGTTGTAGTCTATGTGGTTGCG TTGGTGCTCCTGATGCTACTAGTGAATGGAGCGTTGAATTCCCACCACAG CGTCGTGGTCAAGAGGTAGCAGAAGTAAGTTGCAGTGCTGGTAAGCTTCT AGTGAAGGTTGTCTGGTCCCTGATGGACATATTTGGCCGTAGCTACTACT GA

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