Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA001209

[Submit comment/correction]

Sequence	AA001209
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA001209
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	GCTGACCGCCGCGTAGTAGTCCCCCCTCTCTCTCTCTCATCCCCATCGAC CGAGCGACGACACAGACAATAAGAAAAACTTTTAATCTCCCGAGGAAGCG GCCACCGCAGCAGCCGAGGCAGCCGAGGCAGAGGCAAAGCTAGCAAGCAA CCAAACCCAGGCGCAGCAGCGCAGACTAGACCAGCCTCCTGCCCCCCTGC CCCGGCAGGGACACCACCAGAGCGAGCGAGCAACGGCCCCCCCTACGCGC TTCCCCACGCCTCCTCCCTTTCTCTCTCTAGACACGCAGGGCCGCCTGCT AGGTGCTAGCCTAGACAGCGGGACAAGTCGTCTTCGGTCTCGGCGCCCCG TGCTCGCTCGCCGTCCCTCTCCTCCCCCGCCCCCCCTGTCTCGCCCCTGT CGGAGGGAACACGCGCGCGCGCACCGCCGTGACACGGCCGGCCTGCCTGC CTGCCCGCCCGCCTTTTCCGGCCATGCGTGGGGCCCGCTGACGCTGAGCT AGGAGCGGGCTCTCGCCGGAGAAGCGTGATCTCGGCGGTTCTGTCGTTGG TCGGCGTGTCGGCAGCGGGACTACATGATGATGAAACAGCAGCAGCAGCA GCAGACGCCGCCGGCGAGCTCCGCCGCCGGGTCCGCGGTCACCGTGGCGG TGCCGGGGACTGGATGCGAAGGTACTGCCACTGCTACTGCTCCCTCCCTC CCTCTCCCCGCCTCCTCTGCCTCTTCCAATGGCGGTTCGGCTGGCGCTCC CGTGTTTTCGCTGTTTACTCCCTCCTCCGTCGCGTTCATCGCGTCGGCGG TCGGAAAGGCCTCCCCCCTTTCTTGGCTCTTCCGAAGGCGACGTGATCCT TTCTCTGCGCATTCTGGCACGCGAGGCGTTTTGCAGTTTTTCTGGGGGTT TCTTGGGGAAAAAAAGGTGGCCGGGCGGCCGGCGGCTGGCAGTAGCCGCC GCCGGAGAAGAACGGCGTGCGGTATTTTCGCCGTACTACATTTTGGGACT AGTATCAAAGATCGGAAAGTTGCAGGACTACTACCCCTGTAGTCGCCTCC GGCGAGCCACGTGCTCTTGCCGTTCCTGCAACTACTTCATCATTATTAAG GGTGTTCGCTGCAAACCAAAGTGACAGCCAAAAATGCATCTTTTGAAACG ACTACCAATGGCCGCCGCCGGCCATCGGCGTGTGGTGAAGTGCCGAATGC ATTTGATACCCTGTATTAACAATAAACTGGTGGCAAAAGCTCGTTTTTTC TTCTGTTACTGACGCGGCGGTGGTTGGTGGTGCTGTGTGCAGGGGAGAAG AAAGCGCCGGCGATCAACTCGGAGCTGTGGCACGCATGTGCTGGCCCGCT CGTGTCGCTTCCGCCGGCAGGGAGCCTAGTCGTCTACTTCCCACAAGGAC ACAGTGAGCAGGTGAATACTTTTTTTTTTCTCCCTTTCTTCTTCTGATTA TTCTTGTGTGCTGATGTTTGTTACTAGTAGAATTGATTTTATCCCCTCCT TCGATTAACTTTTTTAAATGCTACTAGTAGTAGAATTGATTTTTCCCACT GCAAAGTTGGGTTTTGTTTATACATTTTAACTGGCGCCTTGAGAGAACGT ATGCGGTCAAGGTTGGTTCCTGTCATCCTGAACCTGTTGCTGAGATGTGA TCCGATTTGCTGTGCCCCATTTTCGTCCAGTGGTGGTGTGAGTCATAGTT ATCTTTGGTTTGATGTGATGTTTTGCTGTTTCCAGTGTTGGAAGTTACTG TTTTCTCTTCCATCATATCACCCATTTCAGGGAATGGTTCTTGGATGACT TTCTTAAAGCACTTGATATTCTGTCCCCATACAATCCCTTGATTCCCATG AGTTGATGATCCTTTTTTTTTGTTTTGCTGGTTTTGTGATACCATCACTG CCATCTTGATATTTGGATTTTCCTTGGGTTTACTTAGCCACTTGGTACTA CTGCTGCTACTACTACCATGGTTTGCTTTGTTTGTTACTGATTTTAAGCT TATGGCCAAAGTAGTTGGGGGTATTGGCCCTACTGGCCGCCCTCTTTTAT GGGGTTTCTGGTGTGTTGCACCATTCTCTTGCTCTGTTTGTCTGGTGGAT GAAGCAACCGAGCACCTTCGGATTTTGCATTCATTGGTGGGGCATTTAGT ATGTTCTGCTGCATCTTTCGTGCATTTGGCGTCGGAATAAGCTTGTTCTG AGCAAGTTTGGAGGATAGGGGGTGATGAAATGCTTGGATTTGGAAAAGAT TCTTTCATCGGAAAGCTAATGCAGGGAGGTTCCTAATTCTGTATTGGCTT ACTGCCTTCCCTTTCCGCTCTTGACGAGGGAGAAGGGGAGCTGTTTTAGG CATGATTGGAAATGGGTTCAGAGCACATGGCTTTACCTGCTGATTTATTC CTTGTATATCATATTTTAATAAAAATCCTGACTTGTGCTTTATGATTTTA ATAGACCCAGATTACTTTCTGTCACATTATATTAGTGGGGTTGCTCGCGA TATATATTCCCTTTGTCAAAAAAAATTATTATTCGGGTTGCACAAGAGAA AGTATAATTGGGTAGTAGTACAGTAGTATATTTAGTTTCAGCAGTGATGC ATGGGTTGACAGAACTTTGATTACCTATGTGTCCAATTTCATTTCATTCG GAATTTGAAAGAACCTGCAATTTGTTGCGCTGACACCAAGGGTTTTTCAG CATAACATGTTGCTGGTTGCAGTTTCTGCTTTTACTAGATGTCTGTTGAT TCCTAGTGGTACTAGTGTGCCCATTAAACTTCAGTATTATGTTTAAGTTA CATGGAAATTGGAATGGGATTTAAGCATGTTTCATTTGCCAGGTTGCAGC CTCTATGCAGAAGGATGTTGATGCCCATGTTCCAAACTACCCAAGTCTCC CATCCAAGTTGATCTGCCTACTGCACAATATCACCTTACATGTAATCTAC AGCCACATGCCTGTTTCTATCTGCTTGTAATTATCTATGCTAAAAAGGTA TTTATTTGTTATCAGGCTGACCTAGAAACAGATGAAGTTTATGCACAAAT GACTCTTCAGCCAGTTACTTCAGTATGTGTATCTCATCTCTTTGTTTTTT CTTCTCGAAACTGACATCCATTCTGTCACGATATGCTAACATAGTTATTT ATGTTTTGATTGGTTGGTAACTATGATCAGTATGGAAAGGAGGCACTACA GCTATCGGAGCTAGCACTCAAACAAGGAAGGCCACAGAATGAGTTCTTCT GTAAGACACTGACTGCAAGTGATACAAGTACACATGGAGGCTTCTCTGTG CCTCGCCGATCTGCAGAGAAGATATTTCCCCCTCTTGTATGTAAAGATTT TGGACTCCAAACCAATTTAGTTTATTTTATGTATCCTTCCAGTTAAATTA TTCTTGCTTCGTGTTCTAGGACTTCTCAATGCAACCACCCGCTCAAGAGA TACAAGCTAGGGATTTACATGATAATGTGTGGACATTCCGTCACATATAT AGGGGTAAGAAATTTCAGCTTTCTGGAAATATTTCCTGTTGTAAATAGAC CTTTTTTTATGTAAACATTTAATTTAGAGTTGTTGTCACTTAGTATTGAA CATGTTTCTCATAGGGTAGAAATATTTTGCACATTGTACCACATTGTTGA GGTATGGTCTGATGTGAAATTTTGTGTATTCTCTGCATTATGTCCACAAA GATATACAACCATAATAGTGTTCTGTTATTAACAGGTCAGCCAAAGAGAC ATCTGCTTACAACTGGCTGGAGTCTCTTTGTGAGCGGAAAGAGGTTATTT GCCGGAGATTCTGTCATTTTCGTTAGGTATAACACATCTTAAGATATCTT TTAAGTTTGAACTAAAGAAATGCATTAGAGATACTAGTTTTGTTAGTTAC ACATGGAAAATTTTACCTGTTTATTATTACTCATGGTCAATTAACGGTGT TTTTCCTTGTTGTTTTTTAATATATTTTGTAGGGATGAAAGGCAGCAACT ACTACTAGGAATCAGGCGTGCTAACCGACAACCGACTAACATATCATCAT CTGTCCTTTCAAGTGACAGCATGCATATCGGGATTCTTGCTGCAGCAGCC CATGCTGCTGCTAATAATAGCCCATTTACCATATTTTATAACCCCAGGTC AGTTCTCACTTAATGTGCAATATTAACTATTGGTTAGCTTAATTTTGGCG AATTATAATGGCTGTTTCAAATCAAAGCATGACATCCAATCTTTGTATTT TCAGGGCCAGCCCTACTGAATTTGTCATCCCATTCGCTAAGTATCAGAAG GCTGTCTATAGTAATCAATTATCTTTAGGAATGCGCTTCCGCATGATGTT TGAAACTGAGGAATTAGGAACAAGAAGGTATTTATTGCTCACTTTAAGTT TCTATTGCGAGTTACTGGCTATTCATATGTATTCTATTTTCCTTCTTTTA AATGATTCGTGTAGATCTTTCCATATATTATATGACGCTTACTGGTTTGA TTATACTTTTGCGGAATGACAAGACTAAGTTGTTCCAGTTTTCAATCCTT TGTACTTGACGCATGTTAGAATGTTGCAGGTACATGGGCACAATAACCGG AATAAATGATTTAGACCCTGTAAGATGGAAAAACTCTCAGTGGCGCAACT TACAGGTTGATTTCCTAGTTAGATTGGCAAGCAACGTTCTATGTTATTAC CCTGTTCTGCTGCTGATACAGAGTCTTCTTATTGGTCAACAGGTTGGCTG GGATGAGTCTGCAGCAGGTGAAAGGCGAAACAGGGTTTCAATCTGGGAGA TTGAACCGGTCGCTGCTCCATTTTTCATATGCCCTCCACCGTTTTTTGGT GCAAAGCGTCCCAGACAGTTAGGTAGGACTACTTGAACACCACTTATACT GTATCTTCTAAATTGGCCTTTAATACAGTTGTTGATCCATGCTGCCAGTC CTTGAGTATATAATGTTGTAACTGTACCATTGGGAAAGCAGTCGGGCACC AAAGGTGGTTGTATATCATATCTGTTATATTAGTATAAATGTATGTCTGA TATGTTCATGAAGATGCCATAATCTGAAGATAGTACTTATTTATGCTTTT TTTTACAAAGAGTACTGTTACTCTGTTTCTTCAGTCTTTGAAGAAATGAG TAGCCCGGAGTGTCGTGATCCTCATAACAAATGATGTTTGGGCTTTAGAG AAGCTCTCACACTACCATACTTTCATACATCAGGCACTCGTATGATGAAA ACATATTTATGAAATGCAATAGACACTAGACATGTCATAACTATATTGGA GTTGGAAATGTTTCTAGGTAGTCTTCTCCATCTAAATAGCTTAGATAATT ATGGACTTGCCTGAACTTTGATGCAACGGAAATTTGTGAATTCTAATAAC ACTGGTTTTATGCATGTCTATAAATTGATCCCAGTTATGTACTTACAGAT GATGAGTCCTCGGAAATGGAGAATCTCTTAAAGAGGGCTATGCCTTGGCT GGGTGAAGAGATATGCATAAAGGACCCTCAGACACAGAATACCGTAATGC CTGGTCTGAGCTTGGTTCAGTGGATGAACATGAATATGCAGCAGAGTTCA TCATTTGCAAATACAGCCATGCAGTCCGAGTACCTGCGGTCAATAACCAA CCCCAGCATGCAAAGTATTGGTTCTGCTGATCTGTCGAGGCAGTTATGCC TACAGAACCAGCTTCTGCAACAGAATACCATGCAGTTTAATGCTCCCAAA CTGCCTCAGCAAATGCAGCAGAACAATGATTTTTCCAAAGCAGCCCTTCC ATTGAATCAGCTTGGCGGGAGCACCAAATCACAAGAACAAACTCAAGATG CTAGCAACCTTCAGAGGCAACAACAGTCCATGAACTTTGCACTTCCTTTG AGCCAAGGTCAAACCAGTCTTGCCCAAGCTCAGATCCTTGTACAAAATCA GATGCAGCAGCAGCCACATATATCTCAAAATCAGTTGCCAGCCGTCAGCC AGCCTCTCATGTCCCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAA CAACAACAAGAACATCACCAACAACAGCAGCAGAAGCAAAAATTTCTACA GCAGCAGCAGCAGCAGCAACTTTTACTTCAGCAACAGCAGTTACAACAAC AGCAGCAGCAGCAGCAACTCAATAAGATGTCTGCACAGCTCTCTAATCTG TCAAATCAACAGCCACAACTATCAGAACAGCAGCTTCAGTTGCAATTCCT GCAAAAGCTACAGCAACAGCAGCATTCATTCCTGTCCCAACCTGGAGTTA CCCTTGCACAATTACCTCTGATCCAAGAACAGCAAAAGTTAATTATGGAT ATGCAACAGCAGCTGTCAAACTCTCATTCACTTCCCCAACAACAAATGAT GCCTCAACAAAGCACAAAAATTCCATCACAGGCAGCTGCACTGCCACCAC CCATGCAGCCAGATACACAACAGAAGCTTCCACAGAAGCAAGCTGTGCCT GCAGATTCCTTAGAAGCTACAGTTCCCCTGACCACGTCACTGAAATTCAG TTCCGCAAACGGGAGTCCTTTGAGGATGCCCGGTGCTACGCATTCTGTAG TTACAGAAGAAATCCCTTCTTGCTCAACATCGCCTTCCACTGCAAACGGC AATCATCTTCTACAACCAGTTGTCGGTAGGGACCAATATTGCAGCATGAT CAACAACGAGAAGGCACCTCAGTCAAGTGCCCCTGTGTCACTTCCAAGCT CCCTTGACGTTGTCACTGGAACTCCAAGAATGACAAAGGAATATCCAAAA TTGAACTCCAATGTAAAGCAAAGTATGATGGCTTCAAAAATAACGAATGC AGGAGCTAGTCCCCAAAATTTCGTGAACAACACACCCCCTACAGACTATC TAGAAACAGCATCATCAGCAACTTCAGTGTGGCTTTCCCAAACTGATGGC CTTCTACATCAAAATTTTCCCGTGTCTAACTTTAGTCAGCAGCAGCTGTT CAAAGATGCACCTCCAGATACTGAAATTCAAGCTGAAGTTCCAAGTAATA ATGCATTGTTTGGAATTGGCAATGATGGTCACGTGGGTTTCCCACTAGGA ACTGATGACTTCCTGACAAATGGTATTGATGCTGTCAAGTACCAAAATCA CCTCTCTACAGACATTGATAACAACTACAGAATACCAAAAGATGCTCAGC AAGAGATATCATCCTCCATGGTTTCACAGTCATTTGGTGCGTCAGATATG GCATTTAATTCAATTGACTCTGGAATCAACGATGGTGCCTTCTTGAATAG AAGTCCTTGGCCTCCCGCTCCTCCGCTAAAGAGGATGAGGACGTTCACGA AGGTTAGCGCTTTCCTTTTCTTTTACCTGAATCTTGGATGCTACTTTCAG TGTATTATCTTCTATGATTCAGCTTGATCTCCATATGATGTAAAATGAAG CCTATTTTCATTACCATGGCAATAGTTGGAAGATGAAGCACTGAACTATA AACGAAAAGATCAGTACTCCTTGACTAAGTCTAAAATGTTAGTAAAAAAT GCGCGTGAGGAGCTTGAGTTGCATAACTTGTCCTTCCCTTATAAATCTGT TTTCAGCACGATGAAGATCAGAAGACTAGAAATTTTGGTTCACTTAAACA AGGTAGTCACTTTAAAATGTGCCTATTGTCATGTATGGAACATGATTATG TTCACATTTAATTTGTGTATGCATGGTTCATGAGTCTCAGGTAGGTCTGA AACTTTTAATGGTTGAGATACTAACAAAAGCAACAACAAAAAATGGCGTG CACTAGTACACTTTTTTCCTACTTGTAAATAGCAGTATCTGTTGCTCTGC CTTGATCAGGCTGGTGTAATTCTACGCTCGAGCATTTGTTCTTTCAAATA TTCGTGAGTACCTTTTCCTTTGCATCTTTGCCTAACCTACAGGTGTCTGT AGGTGTATAAACGTGGAGCTGTGGGCCGATCTATTGACATTAGTCAGTAC GCTGGATATGACGAATTGAAGCATGCTCTGGCTCGAATGTTTAGCATAGA GGGCCAACTCGAGGAACGGCAGAGGATTGGCTGGAAGCTTGTCTACAGAG ATCATGAGGATGACATCCTACTTCTTGGCGATGATCCTTGGGAGTAAGTT CACCTGTCTTTCCATTTCCCCCTGCATGATTTTTGCAGTCCTCTAAAACA ATATACTTTTCAATATTGTAAAATACTAAATATTCAAGTTCTAGTGATAA TGTGAAATATGACCGACTAGAATGATGAATCGATGAAAATGCGTAAACAA CTACGAGTTTGTGTTAGTTTTGGGTGCTAATGTGGATTATAGCTTTGCAC ATATTTTGGCTAATTGTGGGTGCTAATGTTGGTTGTGCAGGGAGTTTGTC AACTGCGTGAAGTGCATTAGGATCCTTTCGCCTCAAGAAGTGCAACAGAT GAGCTTGGATGGCGATCTGGGCGGCAGCGTCCTTCCCAACCAGGCCTGCA GCAGCTCAGATGGTGGAGGGAATGTTTGGAAGGCTCGCTGTGATCAGAAC TCTGGCAACCCTTCCACCGGCTCGTATGACCAATTTGAGTGACCTAGTTT CCGCCTTTCCGGTCTAGACACAACCACACTGCCACTGGAGATGACCGGCA GCAGCTGTGCGGGCGCCAGGATGTTGTAGATGTGCCAGATTACATCCGGG GCGCAAGCGGCTCATCGGATTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.