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GrainGenes Sequence Report: AA028580

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Sequence
AA028580
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA028580
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGGAGGACTCTTGTGCCAAAAGGAGAAAACCAGGCATGATTGGAGATG
TGTCCTAAATGATGATATATGGTCAGTGTCTCAAATTCCAGAGGAACTTA
ATTATGCAATATACCTTAGCTATGAAGACTTGTCGCCGTGCTTAAAGCAA
TTATTCCTGCACTTCTCCCTTAAACCTAAAAAGATAAACCTAAGAATCAA
TGAAATTGTCTCCATGTGGATTGGTGAAGGATTGGTTCTAGGAGACAAGT
GTAGTGTAGGAGATAAAATTCCTGCAACACATTAGCGTTGAAGAGTGTGA
AGGTTTCCTGCAACTCCGAGATAGCATTTATAAGATGCTAGAACTAAGAT
TTCTCGACATTGGTGGCACAAATGTTAATAGTATTCCTAGATATTTTGGT
GCGCTCACAAATTTAAAGGTACTTCATGGGTTTCCAGCCTACATGGATGG
AGATTGGTGTAGTTTGGAGGAGTTAGGGCCTCTTTCCCAGGTCAAGGAGC
TTGGATTAAAGGGTCTTGGGACTGTATCTGCTACTTCATCCATTGCACAG
GCTGGATTAGTTGCAAAGCCACAACTTACTACACTTAGATTAAATTGTGG
CAGTACACTGGGAGACGAGGGCAGTATCACAGAGAATTGAAGATGTGTTT
GATGCACTCTGCCCTCTACCCTGCTTAGAATATCTTGCGATCAGGGGGTA
TTTTGGCCGTCAACTCCCAAGATGGATAATGTGGGATGCAACAGTGCCGC
TGGAGAACTTGAGGACTCTCTTCATCATGTTTGACCTTTCTTGCTGCACC
CATCTGCCTGATGGCCTGTGTCGTCTCCCATATCTAGAGTTTCTAGGGTT
TTATGACGCTCCAGCAATAAAGTGTGTAGGGCCTCAATTCGTGCAGTCCT
ATCATAACTGCCAGCGTGCTTCATCCCAGGCGATCGATGATGATGGTTGC
GTTTCCGAGACTGCACAAGATGGTCTTGCAAGGAATGGTGCAATGGGAGG
AGTGGGAGTGGGAGGAGCAAGTGGAAGCAATGCCTGTCTTGGGGGAACTT
CGTATCAAAGATTGTAAATTGAGGTGCCTCCCTCCTGGTCTTGCCTTCCA
TGCAAGGTCTTTGAGAAAGTTAGCCATACTCAGTGTCAAGGGTCTCCAAT
CTCTTGAAAACTTTGCTTCCGTGGTGGTTGAGCTCGACCTGTATGTCATC
CCCTACCTGACAAGGATATTAAATTTTCCCAAATTGCAAAAGCTTAAGAT
GGAGCAGTGTCCCAAGATTGAGTTTCTTGGTGAGATGAATGTACTTGGTA
GACTCCATCTGATGCTGGTTTCCAACAGCGAGAACCAATTTCCGCTGTAT
CTGCAGACTGTAACTCCCAGTCATTTGCTGATGGAGCGCTGTAACCTGGA
GAGGCTTATAGCTCCTATGCGACGTCTTTACATGGAATTGGAAGGAAAGC
GACATCGTTTCAAACAATAGCTGGCATGCGACGGTTGTGAGGCGGCAAAT
AGCTCCCGTGCGACTTCTACTTAACCCCACGAGACCGTCAACGAATTCGA
ATCAGCTGAGCACAGTAGGACCCACAGCCTCTCCACGTCACGGCGGAACT
CACCTGATGTCCACCTCATATCATGGGACCCACCCTGTGGTCGAAGAGAG
CCGTTGGCCCCGATCCGTCCCCGCACCGAGCACTCCCGCCACCGTTCCAG
CATCTCATCCCCTTCCGTTTTCTTCTCCGGCGAGCAAGTGCGGCAACGCC
GGCGAGGGATGTCGAGCTCTGCTTCCTCCCACCGCTCATGGCCTCGGTAT
GGTGCGGTACCGATGAGGAGGTGCCTCGATTGCCCCCGTACCGCGCCCCT
GAAGAGGCTTGTCACATCCACCGACAAGAACGGCAACATTGGCCGGGAAT
TTGTGAAGTGTGAGAGCAAGCCCGAGCCGGGAAAGGTGAGATCTGAGTGT
TCCGAGCGCCAATTTCTCGCTTTTCTTTCGAAATTTCATGTATTTCATCG
AATTTGGGATTTAGGGTTCATCTCTGCGATTTCAGGAACTGCCAAAATGT
GGGCATTTTGAGTGGCTTGATGAGTACATCGAGCGAATTGGGGTGGAGGT
AGCATCCCGGGAGCTCAAAAACCCGTCCGTGGTGGAGCAATTGGGATGTG
GCAACCCTATTTCCGCTGGTACTACGGTGGATGCGGAAGTGAAGGCCGAG
CTGAAGAAGATGAACAAGCAGCTAAGGCAAATCATCGAATTGAAGAAGCA
GGACAATCTGATGGCCGGTTTTTTTATTTTTGTGTAATTTCTCTCGGATT
AGTTTATCTCCTCATCGTTAGTCATTAAACAGCGCAGTCAGTGTTCGAGT
GATGCTTTGTAATGGATGTAATGGTCTATGTCTTTGGCTTGAATAAAATG
CAACACAAATTCGGGCTAATTTTGAGCTGCTCTGTTTTCGAAATAAGTGT
TCCTTCAGTCGTCAGTGTTCCTTTTATCAGTGTGCAGGGGGCGCCCGTGT
GCAGGGGAGGGGGAGGGGTTGAAAAGTAAAAAAAACAATTGACGAGGATT
GAAAAAGGCCAGACCCAAATATAACTTAGCCATGCCAAAATGGACGTATC
CAGACCCAATAGTAACTATATGTTGATTGTTCAAAAAAAAATGGTACTCA
CGTTACAATCTAAATAGGGACGTGTGGATCTGCAGATACTCGTGCTCAGG
TTGCAATCTTTTTTTTTGCAAAAGTAAATATATAAATGAAGTCCAAGGAC
ATCCATTTAACTGACATAACTTGGGCGCTCCTTTAACTTATGTAAATATG
CAAATAACTTATTTGAAAATGAACCATGTGTTGTATGAACTTGTTTTTAT
GTGTTTTGTTTTATACACTTGTAAATATATAAATATTGCACGAGTATTAT
ATGAACTTGTTTTTGTGTCTTCTTTTATACACTTGTTGTTTTGGGTGTTT
TGACAAATGACAATACAATAAAACACAGATTACAATAAAACAAGGGGATA
GATAATATTGGGATAACATTACTTATATTAGATAGGGGGGATCGATAACA
TTACAATAAAAAGAAAAAAGTACAATAGGCGCCCCGCCTAAACCCTGGGC
TAGCCCCTAAACCCTAACCCTAGCTACCCTACTCCATCGGCGGTGGAGGC
GGTGCCGCCGGTGCAGCCGCCTTCACGGCATTCCACGTCGCCAGACTCTC
CCGGTGCTCCCGCTTCCGCTGCTCCTCCTGGAAGGCCCAGCGATTGGCCT
CCCGTCGCTCGTCGTCCGCCCGTTTGCGCCTTTTATTCAAGGAGTGTTGG
GCCTGCTTCTCCTCCCACCTAGAGAAAGCAGCCTCCTGCTTTTCCTCGTC
CTTCGCCGCCTTAGCCCAGTAGGCTTCAGAGGGGAGGTCGCCGCCGCCGG
GGAGGTTGGGGACTGGGTTGGTGACGATGGGGCCCTGCTCCCCCCAGGGG
CAGGGCGGGGACTTCTTGTTGCCACGCTTGGGGCGCGTGGGTGCCTCCTG
CTCCCACTACTGCTTGTGGTTCGGGTGGTTGTCCTCGTCGCTTACTTCGG
TGTCGGAAGGGAAGCAAAAGGGGGAGGTCGCCATGGTCGGAGTGTTTGGG
GGCTGGGAGGAGGCAAAGGGACGGGCTCGAGGTTGAAGATGAGGGGCAAG
ATGAGATGAGGAGGCAAAGGCGTTTTGCCTATTTATTGAGGGCGGGGCGT
GAAGGGCGGCGTGGGAATCCAGCGTCGCGTTGGCGCAGACGCCGAGACGA
GACGCGTGCGCTGCGTTGCGTGTGGGAAGCGGGCGTGATCAATGCGAAAG
AGAGAAAAAAATAGCTAGGATGCGACGTATTGTAACCCCTGCACCGCCGC
CCCCGCCCCTGCATGCATGCATCCATGCATTAATGCGAAAGAGAGAAAAA
AAGTCCAAGGTAGTTGTTCATTGGCAGTACACTTATTTAATGGGGCAGCG
CTGATGCACGCAAAATAGCTAGACTGCGACGCTAGGGGCAGCTGCTGCAT
GCTTGGTGCAGCCCGCCCCGCCCAGCGCCCTCGCATGCCACGCTCGGTCC
AACGGTCAATGGAGTGTGCCAACGCTGTATGTTATATTTATTACATATTT
TAGATTTTGATATTTTTTCTTAGACTGGTCAGGGCACCCACAATGTTGCC
ATTGCCAAATCTGACATAAAGGTAAATTTGGCTATGGTATGAAATATAGC
AACAGCTCTACAATGTAGTGGTTCCAAAATATTTATAACGTGGGTCCCAC
CATCAAGCTAAAACAACACATGAAACAAATATAGAACTACCCTCACAGTG
TAGGGAACTAGTTCCAAAAGCCAAAAGAGAAATTTAGCATCGGAGCAACT
ACTTGCTTCGGTTCCCAGTTTTCTTCCATTTAGAACCACCTCCACAATGT
AGGGAACTAGTTCCAAAAGCCAAAAGGCAAAAATGGAACCACTTTTGGCT
ATACATTGTGGGTGCCCTCATAGTGACATGCATACTCCCTCTGTCCACAA
ATAAGTGTACGTTTGGCTTCAAAATTTGTCCACAAAAAGTGTACTTCTAC
CTTTCCAATGCACTTGGGCATCCACTATGTAGTCCAAAAGGCTATCCACA
AGCCAAAAAGTAGTCCATAAGGCTATCCATATACATAGTGGAGGTTTACT
TTAGAAGATTTTCCTTAAGGGTGACCTACAAGCTTATGGGTTGCCCACAA
GCAATAAACAATAGATGTGGTATCATGCATATGTTACTAGTCTAAGTTAC
TACTCCATAGTGCAAAATAACATAGATGTGGTATCATGCAAAGTCTCATT
TATTATAATGAACCTGAGGGGAGTAAGTTTGACTGAAGAAAGTTGTTACA
CGTACACTTATTTAATGCGACGGAGGGAGTAAATACGCTGTAGCGCTGTT
GCACGTAAAATAGCTAGACTGCGACGCTAGGGGCAGCTGCATGCATGGTG
CAGCCCGCCCCGCCCAGCGCCCTCGCATGCCACGCTCGGTCCAACGGTCA
ATGGAGTGTGCCACGCTCGCATGCCACGCTGTTGCACGTAAAAACGATGA
AGCCAATCAGATTCCAGAATCATCCATCCCACGGATCGCCAAGAGCTAGC
CACGAAATCCTTCTAAGAGACGTCAACCAATCAGGTTGCAGAACAAGCCC
CTCCACGGATCGCCCAGAGCCACCCGCGGAATCCTTCTAGAAGATGCGAT
CGGACGGCCACAGTGTCGCGCTAGGGTTAGATCTACGTTCCTCATTCGGC
CTTAGGGTAAGCAGGGTTTAGGATGCAGTCAACGGGGTTTCACAAGTTTG
ACCAGACATTCAAATGTGCATAACTAATTCAAAAAAAATCAAAAAAATAC
AAAACCTTCGCATGGTGTCATGTTATGTGACATAGTTGTGAGGAAAAATA
TCAAACTTGGTCTATTGATCATATTTCAAAAAAACCTTCACAAAATGACC
TATCTCCTCCGAGGTTTTCTGGCTTTCGGGTCAAATGACCAATGATATGG
CTAGAATTAAGACATAGTTTGTGATAATGTGCCCATATTTGGCATGCATG
TATATAATGGGATGACTAACAATGTTGTAGCACAAAGTTTTCCTTTTTGA
CGCAGAGAAAATCATTTTCTATTTTCTGAGTGCCGAAAGAGGGGGGATTT
GTGAAGCAACCACCAAATTGAAGTTTCAAAATGGTAACATCCTATTTTTC
AAAAATACTAGACCACCTAGAATGTACAATTTCCCAACTTGAGTATCTCA
AACCTTTTATTCCATCCCTGGTGAAAAAGACAAATCCTGCCGAATCGGCT
GGAAGTGGGTAAGATATGAACTACAGGTACATGATTTTATGCTGATGATT
TTTTGTAAAAATCATTTTTAGGTTCACAACATGCTATTTCATCAGAGATC
CAATGCTAGTTTTGTGACCCTCAACCCCTAGCTAAGAATATTTATGAAAA
CCCTTCAAGTTTGACCAGACATTCAAATGTGCATAACTAATTCAAAAAAA
ATCAAAAAAAATACAAAACCTTCGCATGGTGTCATGTTATGTGACATAGT
TCTGAGGAAAAATATCAAACTTGGTTTTAAAAATGGTAAAAAAAAACTTT
CTTAGAAATGGGGTGGTTTACCCTAGCTTTGGAGCCCATTTCTACCCCAT
TTTGGGTGAGGGTGAGTTGTACTTCACAAAAGTGATCAGGGTGAGGATGA
GTTGTATTGTACATATGAGAAAAACGTTGGAAGCTCATACAAACATAGAA
AAGTGACATAGCTACATTTGTTGAAATTCAAATTTACCATCATATTTGAA
AATTTTCCAAATTATCAACAAGTGACAAATTATTATAATAACAAATGTTT
ACAACAACAAGTGCGAAATTATTACAACAACAAGTGTCAAATGTTTACAA
CAATAACAAATGTTTACAATAACAAATGTTTATTTCTTTTGGCTCTTCTT
ACCCCTCGTTTTCTTCTCCTTCACAAGTTTCACACCACACAATAGGTTTA
TGCTCTTCTTTTTCTTACCATTACCATCTGGCCTCCCCACAGCACGTCCA
AGAGTCTCCTTCACCTCCTGCACCTCCTCAACAACCTCATGATCATGATC
CAGAGCCTCATCAACATGGTCACTTTGCACCAGAGCCTCAACAACTTGGT
CAGTTTGCACCAGAGCCTCAACAACAGGCTCATTTTGCACCAGAGCCTCA
ACAACAGGCTCATTTTGCACCAGAGCCTCAACAACAGGCTCATTTTGCAC
CAGAGCGTCAACAACATGCTCATTTTGCACCAGAGCCTCAACAACAGGCT
CATTTTGCACTAGAGCCTCAACAACAGGCTCATTTTGCCCCTCATTTTGA
ACCAGAGCTTCCAAATCAGAAACGGTGTGCCCTAAAGCCTCAACAGTTTG
CACATCATCCTCCAAAACAAGTTCAGATTGCACCTCAGCAGCACCAAACA
TGATCTGGTTAGTTCTCTTCTTTCTTTGGCCATTGATTCTTGCCCTTTTC
ACTGGCCAGCATTCGTCAACAACAAGAGGTCGGCCTTTTTCTCCACGCTT
CCTCCTGAAAACAAGCAAGTTAGCTGGAGGAGAAAAATCATCAACAAGAA
ATGGGATAGATTTTGGATGAACATACTTTGGCTTTTCAGCAGTGTATCTG
CACTTGGTAGAGCCAGCTCGGTGTCCAAGTTCTTCACAGAGTTTGCATCT
ATTCTTGTTACCTTTTTGGGCCCTTTTTGGCTTGGCATCTTTCTTTTCAT
CTTTCTTTCCCTTCTTGCTGCTCCCACCTTTCTCAAACCAAGCCTTGAAT
CTACTCTGCTTGGGCCTGCCAGCCTTTCTTTTCATCAAAGGAGGACACAA
GGAGAACTGAATGTCCACTTCAGGCCACTGAGACTGATCTGTAAGTGCTA
GAATTGGTGTTCCATATGCAGCCTTGAATTTTGCTACAGAATAATACTCA
TGCAAATATGGGTGCATATTTAGCTTGTGTTTGGAGGCCAAGAAAAGTAT
GGCATGCTCACAAGGCTTCCCAGTGTGTTGCCACTCAAGGCATGTGCATT
CATGCAATTGAGTGTCAACAACATGCCTCCTGCCAGTCTTTGTATCTCTG
ACTTCAGCACCCCACAATGAGGATTTCTCAACACGCAAATGTGCAAGATT
TCTGCTCCTGTTGACCACCTGCTGCACAACATCAGGAAGCTTATCTCCTT
GAAGAACATCACCAAGCCTTCTTCTCAATTCCCACAACCTCATGATCATG
ATCCTGATCTGGTCAACCATGTCATGGATAGGCAAGTCTTTTAACTCCTT
CACTTTGTTGTTGAAACTTTCTGCCAAATTATTGTTGATATGATCACATT
TGATGGCAGTGTTAAAACCAGACCTGTACCATAAAAGAGAATGGTAGGTT
TCCAACCATGTACAAAACTTGACCCTATCCTCCTCAGAGCATGCCGCCTT
AATCTTCTCAAGGTGATATGAATGTGTCTGCCTGGTGTAAGATCTTGCTG
CTGGCCACATGCGTCCAAAATCATCTCCTCTGAATTTTTTGATCAAATTC
ATCCACATATGGCCGAAGCATTCCCTCTGCTCAGCATGAGGGAAAACAAT
CTTCACTGCATTTTCTAAACCTTTACATGCATCTGTGTGCACTGCCAATG
GAGAGACTGGCCCTATGCATCTTTTCAACTGCATCATGAACCATGTCCAT
GATGCCTCTGTCTCAGACTGACACATGCCAATAGCTATAGGGAACATCCA
ATTGTGTCCATCTAAAGCATTGCATGCTGCTAGTTGACCATTCCACTTTC
CAGTCAAGAAAGATGAGTCTATACTCAAATATGGACGGCAACTTGCTTTG
AAGCTATCGATGCAAGGCTTTAAAGCCATGAAGAATTTAGAGAAGAAGAC
TTTCCCATCAGCTGTTACCTCAGTATCTATCTCCACAACACTGCCAGGTG
ACCTCTTCTCTACTTCTGCTTTGAAGTTATAAAGCATTCGAAAGGTATTT
GCCCAATCACCATATAGCTCTTTCATTGCCATTTGCTTTGCCTTCCACAC
TGTAGTATAATTCAGCTTAATGGGGTACTGCTTTTCCAAGTCTATTTTCA
GTCTCTTTGCAGTGTTGTTTGGTGTTGTGGCTAAAACGGGCTTGATCTTT
TCTGCAACCCATAATTGTGATGTCATCTTTGTAACTGTTTGAGAACTTGT
AATGCAAGTATGAGGTTTTGGAATTTGATTCACTCTTATTGTCCTTCCAT
CAGGTTGGCGTCTAGCAGATATATACCACTTGCAAGGCTTGGCACCACCA
TCATAACCTATGCATTTTGCATAGAACTTCTTTTTATCAGTCCACATAGT
CTTGGTAGCAAACTCACGTTTGACTGCATATGTCCTGAAACACATCCTGA
ATTCATCCATGCTTGGAAACAATCTCCCAACTTCAATAACTGGGTCCTCT
TTGTCATAAACTGTTACTAGCTCATCATCATGTGCATCATCTACATGAAC
TACAGCATTTTCCAACAACTCTAGATCTATATCTGCCTCTTCATCTCTTA
AATGGTTGTCACCATCATTTGCAGCTTCATCCCTCTTCTTCTCCTTGTCT
CTGTCATCTATAGGAATGCCAAAAAGCTTTGCCATTTCAATGTCATCTAT
TGGTGCAATGACCAAATCAGTCCGGTCATGTATCTCAACTGAATTCCAAT
CAACAGTTACAATCCTTTGTGCATTACCATCTGCAGCCTCCCCTTGTGCA
TTAGCATCATCATCCTCCACTGTTAACACTTCCAACTCAGTAAGTATAGG
CATTACTTGCCTTTGTGCAGCCCAATCATCCTCGACCATCTGAGCAGCCA
GCTTCGAGGCCACATATCCAACCCTCGAATCAGGTTTTAGATCAATAAGC
TCTGCTAAAAATAGAACAGTTTTGCTTGTCCAACCGTTTCGCTCATCGAT
TTCATCAACTATATGTTCCCCTGTCTCAACCCTAACATAGTCACATTTGC
AATCATCAAATCGTAACAAAGAAACTTCTTGCTCTGGCCCCCAAACCACA
CTATCCCCAATTTTTTCCACCATTTTCCTCACTGCCTCCTCTCTCATGTT
TATTAGCTCTTGGGGATCAACATGTTCTAATTCCACCTCCCATTTAACAA
CCGTGTCTCTCTCAATGATCTGCGTGCTGCCATCAACTAAAACAGCCCTA
GAGGGAAAGAAATTGATGCGAAATTCGAAGGTTTGGCGCGCAACATCGTC
TCCCCTGATTTTGGCGGGCCCTGTGAGCTAGCGGAAGCGAACAAAGAGCT
CAACCTTAGAGAAATTAAGTGCAGAGATACGGGATATACCGATTAGAAGT
CCCCTCTCCATGCTCCATATCGTTTCCCCTCGCCCCGTTCAGCACACCCT
CGCCTCCACAATCTAGCATCAATGGGCACGCTCAGATCTCGAATTGAGAA
GAATGGGAGAGGAATTAGCTTTCAAATGGCACTCAGCACCTTCGTCGTCG
AACGAAAGCGCCGCCGCCTAAATTAATTGCCGTGCCGCCGCCGCCGGCGC
CGAGAACGATGGGTGAGGTCTGTCGCCGCCATCGGGGAAGCTACAGTCAG
TGTGACGCGCGCTCTCGGTCGGAAGCGGTTGGTTTGACTGGATTGACTGG
CTGTCCCAACCAACCGGTTTGGCTTAACCCTAATCTTGGAACAAAGTTAA
ATGTGTCCTTACGACCGTTTTAAGGCCCGTGTAGCCCTGGGATATTAGCT
GCCTCACAACCGTCGCATGCCGGCTATTGTTTGCAACGATGTCGCTTTCC
TTCCAATTTCATGTAAAGACGTCGCATAGGAGCTATAATCCCAACCTGGA
GCTACTCGCTTCCATGGCTGCAGGAAAGTTTGGGCCCGAGTGGGACAAGT
TCAGCCATATCAAGCGAGTAGAGGCTTATGCAAATGATGGTGACATTGAG
AAGAAATGGCACCTGTTTTACACAAGCGAGCCCTACAAAATGGAGACAAA
CTTCGAGCCACAATAATCTGGAGGTAATATATATATATTGTTAATCTGTT
GCCTCTTTTCCGGTATGCATAGGCATAGCTAATCTTTTTTCTATTGTTTC
GGTTTGCTTCTCAGGAGTCTGAAGACTGCCAAGACAAAAATGAGCCATGA
TTCCTCGGTAACTCTAGGACAGGAAGGAGGAATGGAGAATTAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.