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GrainGenes Sequence Report: AA026226

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Sequence
AA026226
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA026226
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTCCGATCCCCTTCCTGCTCAGACACATAGTACTAGCTACCATGGCGATT
GTTGCGAGCGTTGCGACAGGGGTGATCAAGCCACTCGTCTCCAAGCTCTC
CAAGCTGCTGGAGGAAGAGAGCGCCAGACTCAAAGGCGTTCGCAGGAACA
TCGGCTTCATCAGAGACGAGCTGAGCACCATGGGCGCCACGCTCCAGATC
CTTGCCGATACGGAGGACCTCGACCCCGAGATGAGGATCTGGAGAGACGG
CATCCGCGAGCTGTCCTATGATATGGAGGACTGCGTCGACGACTTCATGG
CTCGCGTTGATCACGACGACGACCCGCCCACGGGAATCAAGGGCTTCTTC
GATAAGCTCAAGAAGCTCAAACCTCGCCACGAGATAGCCGGCGAGATTGA
AAAGCTCAAGGCTCGGGCAATGGAGATGAGCGACAGGCACCAGAGGTATA
AGATTGATCGAACACCACTTGGCGACTCTTCCATTGATCCAAGGCTACAT
GCGCTTTACGTCGAGGTCGACAAGCTCGTCGGCATCAAGGGCCCCAAAGA
GGACATCATCAAGTGGTTTGAAGAGAAAGCTTCTTCCGCAGAGCTCCGGG
TGCTGTCGATTGTTGGCCCTGGTGGTCTTGGTAAGACTACTCTCGCGAAT
CAAGTCTACCATGCCATCGAGAGTCAATTCCCCTCTGCAGCTTTCATTTC
TGTTTCTCGGAAGCCTGATATGAAAAATGTTCTAAGAAATATTGCTGAGA
CAGTGCGGGTCAGTCAACCTACCTCCAATGACGATGAGAAGCTACTGATT
GATAGGCTCAGGGACCATCTTCGAGACAAAAGGTAAGCCTCTCTAATGTT
AATCATTTCAAGTATATTTAATGCTCCATAAATACTGCCGGGACTATATC
AAATTTATCATTAGTAAATATATGAGTATACTTTGCCAGAAAATCACTAA
AAATTGAAAATGCAAAATTTAATCCTTTACAAGTAACAAAATATATTTTA
AGTCTTTATCTAAATCATTTGTACTGTGTGTTAAATTTTGATCATAGAGA
TAAAAAATAATAATTGTTTCTGTTATTATCTATCGAAATATTAATCATTT
TTCTGCATAGTTCAATTAAAGAACATAACACCACTGAAGCACTAACATAT
TAACCAGATTGATCGACTAGACATATCTAGAAGATCTACATTTGACATAA
ATACTAATGCAAATAAAGTGATGAGAAGCACAAACGGGTTCTATGGGAAG
TCCACCACCACATCAGCACCATTGACATTGTCCGCCATTTGGGTGAAGAT
GTCATAGCCATCCGCTAAACTCGTAGACAAAGCAGTCAAACTGTCAACTC
GGATGTAGTCGAAACAAAACGAGCAGTCACACTGTGACACTCCCCTAAAA
CCTTATCGTCCCTCTCTTGGTATAGGATATCAAAAGACGGGGTTTCGGAG
GACTGCTCTTCCGAACGGCAGAGGACGCAGTAAGCCTAGATGCATCATAT
CAACATGAACCTTGCAACGGCCATAGAGACAAAGAGCAAATGGTGTCTCG
TGTTCTAGATTCGTTTGTTCCATTTTCTCCTAGATAACCTAGGGACACGC
ACAAAGCACAAGCACCACGTGGTGCAAGAAGGAGGGCATATATCTATAAT
GTTTTGGGTTAGAGGTGTGCTTCAGTGGTCCCCTCCTCAAACTTAAGTTT
GTATAAGCCAGTTTTTCTTTTGACCCCGTCGAAAACCATATCCAGACCAT
GTATATCTCCGTATAGGTGTACTCGATCGAGCTGAGTATACTCCTCATTT
CCACCAGCTGATTCCACCTCCTGTTATCGCGATCTACGTCTTTGCATGCC
AAATTCTGAATTTATGTTGCTGCTGCTATATACCTTCCAATTTCCACCTC
CCACGGGCACGTGAGTATAGGTGTACGGTGAGTATACGTCTAAGAGAACC
ATGCGGGCTCGGGTAGATTTGTACGGTCTTCGAAACGAATTGGTATCAAG
TTTTTGTTTGTCAAAGTTTGAAGGGAGGGGGAACACCGAAGCAAAAGTGT
TTGGGTTAACGTGTCTTACTCCATTAGGAACCACACCTTGTCTCACGTTT
TCGGGCATTAAATGGGTGAAGCTTTGGATAGCATGCACATTGAGGCATAA
TATGGTGATACTTCTCCAAAAGTTTCTAGTGGTGTGGAAAAATCAAGTAA
TTTGCTAGGGAGACGATTTTATCAAATATATGGGAGCTAGGAAGGCTTCA
CCCCAATATTTCAAGGGAGTGTGGCTTGTACAAGGAGTAAGACGCCATCT
TCTATAATGTGGTGGTGTTTTTTCTCCTTATTCTCATGAGAACAAGATTT
CTCTCATATTTTCCTCCCCAATTAGATTGTATGGTGATGATTTTTCTTCC
AAAACTACGTCCAACAAGTGCTCGAAATTGATGAAAGATATTAAAAACTT
TAGAATGATGTCTGATCAAATAAATCCATGTGAGTTTTCTAAAATCATCG
ATAAAACTAATGTAATAGTTCTTGTGACGGAAAGAATGAGGGGCATGCCA
CCATAAAGCAGTTGAACTGTCAATGGGGATGTAGTTGAAACAAAACGAGC
AGTCACACTAAGACACTCTCCTAAAGGCTTATCGTCCCTCTCTCGGTGTA
GGATCTCAAAAGACGGGGTTTTGGAGGACTGCTCTCCCGAACGGCGGAGG
ACGCAGTAAGCCTAGATGCATCATATCAACATGAACCTTGAAATGGCCAT
AGAGACAAAGAGCAAGTGGTGTCTCGTGTTCTTAGATTCGTTTGTTCCAT
TATCTACTAGATAACCTAGGGACACACACAAAGCACAAGCACCACGTGGT
GGAAGAAGGAGGACATATATCTATAATATTTTGGGATAAAGTGTCTTACT
CCAATAGGAACCACACCTTGTGTGTCTATAATATCACATGTTTTTTGGAA
TTAGATGGGCTAAGGTTTGGATATCATGCACATCCATAAATGCACATAGA
GGCATAATATGGTGAAACTTCTCCAAAAGTTTCTAGTGGGGTGGAAAAAT
GATGAGTAATTTGGTGGGGAGACGATTTTATCAAATATGGGAGCTATAAG
GCTTCATCCCAATATTTTAAGGGAATGGAGGCTTGCGCAATGAGTGAGGC
GCCATCTTCTATAATGATGGTGATGTTTTCTCTCAGTGGATCTATTCTGC
TTATTATCATGAGAACAAGAGACATGGTGAGTAATGCCAATTTTTTTTAA
AAAGAAATTTAATCACTCATATTTTCCTCCCCAATCAGATTGCATGGTGA
TGATTTCTTCCAAAGCTACGTTCAACAAGTTCTTGGATTTGATGAAAGAT
ATTAAAAACTTTAGAATGATGTCTGATCAAATAAATTCATGCGAATTTTC
TAAAATCATCGATAAAACTAATATAATAGTTCTTGTGACAAAATAAATTA
GGGCATGGCCCCATAAATTGGAAAAAATCAACTGATGGGAAACACTAGAT
GGTCTAGAATAAGGCAATTGATGACGTTTTGCCATTTGACACCCTCACAC
ACTGGACACTTTATTTTCACTAGAAGATGGAAGATTATTTTTTGCTAATG
ACTCGTTGGACAATCGTTGATGTCGGATGCCCTAAATGACTATTCCATCT
ATGATGGGATGGCGTAGTGGCTGCAAAAGCTTGCTTGGATGATGACAACA
GCGATGTGCCGGGTAGATGATATAGGCCCAGTTCTTTTGAGCTTCGGCTT
GTGCATAAACTGTTCCGACTTGAGCTGTCCAGAAAAACCATAGTGAAAAT
AAGCTGATGAGAAACTACAGCCCAGTTCTTTGCGGCTTCCACTGTAGCGG
CTTATTGTCAGATTTGTCTGTTGAAAAGTCTATAATACCCATAAAATGAT
TCCCTAAATAGCTGGCATCTAGTAGTTGGTATACACATTTATCAGATGTA
TATGACAATTGCTCAGTGACAGTACTGACAATTGCCCATTCTACTGCATA
CACGCAACTAGATTGACAGAAAATTTCTTCGATACTTGCAAGAATTCTTG
TGGCATACGAGTATTCAACAACCATCGACACACTGAGTATCAATTCAATA
TTTGACACACTGAGTATTAATTCAATATTCAAGCATTACTGAAAATGTCC
AACAACTGAACATCAAAATTCAGTGTTGGTGCGCAGCAAATAGCACAAGA
GAAGATAACAAGCAAGAACACGGAACTGCCATGGACAAGTCTATGAGAAA
TTTCTGGACAGGCAGGGGCTCGATCTGATGACTGCAGGTGGGACCTGGAG
GGGATTTGGAGAGGCCCCGGTGAAGGAGTTGGGGCTGGACGAGCTAGGGG
TGGCCGCATTGTACCTTCTGGTCGTCCGTTTACTGCAGGGCAGGATAAGG
GGAGGCTTGAGGATACGGCGGCGGGGTCAGAAGGTTGGCCGGAGGCAGGA
GCGCCGGCGGACGGCTACAGCAGATCGATGCCTGGTCGGCGAGCTCGTGC
TCCACCGAGACGACGAGATTGATGCCTGGTTGGCCGGAGGCAGGAGCGCC
GGCGGACGGCTACAGCAGATCGAAGCCGCGGGCTACCCCTCCGCCATGGA
ATGGGACCGCGGTCGGGCGTCGGGTGGCGTGGGACGGCAGCTGGAGTTGA
CCGTGGCGACGGCGGAGGTGCACGAGGCACGAGCAGGAGGAACCCTAGAT
CTATATAGTCAGAACGAGAAAGAAGGGAGAAACGGGAGAAGAACACAGTT
CGTTCCAGAAATCTGGAAGGAAAATATCATGCGGTGGCATTAGAAGTAAA
TAGCGTGAAAAAATAGGGCTATAGAAACGTAACGCTTCGGCCAGCCCCGG
GAAGCCATCGGAAGCTGGGGTATCGTGGCTTTCTGCAATCGTGAAGGAAT
CCGTTAAGCCGGCTGTCACAAGAAACGGTTTAAAATCCAGTTCTTTTAGG
CTTAGGCTTATTTTAACCTCTAAGCTGCTAAGAAGCTTCAAAAGAACTGG
GCCATAGTCCATGTTTACATGGACCATCAAGAAGAGTTCTTCTTGTGACC
TGATCCTGAATGCAAAAGAATTTTGGTTGAATTTCAGTAAACGCATGGTT
ACCATTGGTGAAGCGATGAGAGAAAATAAGGATTTGACTTGCATTAGGAA
CATAGAGTATATCTTTTAGATGAAGATTTCGATCATTAGTTTGAATAATA
GAATGACTAAGTGGTTAATATCCATACCACCACCTCTAGCGGTGTGGACT
AGTTTGTTATCGTGGTACTTGTCAACGGCGTGGAGCTTCTCTAGCTCGCT
GTTGACTTGGTCGGAGGCACCGATGACCATGTATCAGTTACTGTTGCCGC
CATAAGTATTGTTGTAGGTGGCGGCATTGCCAGACCTCTCCCTGGGGATG
AAGTCCTCGTCACAGCGGTACCAACAGTCCTTGATTACATGGTCCGTGAC
GTTGCATAGTTGGCACCATGGACAGTGCTCTCCCGTGTTGGTGTTGTTGC
GTCCAAGGAGGAAATTGTTGTTGTAGGTGCCCACGGACACGGTTGTTGTC
GGTGTCGCCATAGTTGTTGCTGTCGTTGCCTCCTCCATTGTTGTGCGGCC
TTGATTGTCACGGACTCTTCCTGTGCGGCCGAAGCAACCACGTCCACCGC
GCATGGCGGCATTGGCCGAGGATTGTGATGGTCCGTGAAGCATCTGTTGA
TGACTCTCATACGAAATAAGCTGGGAATATAGTTTTCTCACCGTGCTAGG
CTCAGCTGGGGCGATGATGGCAGCGACGAGGGAGTCGTAGTTGATGTCCT
TGCGGCCGGCGAGGATGTAGCAGACCATGTCTTCATCATGGCGATGTACT
CCGCCATGGTCTTGGTGCCCTTGTCCGTGTTGGTGAGGGCGATGCGGGTG
TTGGTGGTGTGCGGCGGGACTTTGTCGTGTACATCTCCTGAAGAGTCTCC
TAGAGCTCGGCTGCCGTCTTGGTAGTGATGGCATGAGGCAGAACCTCCTA
CGAGATGGAGGAGATGAGAAAACCCTGAACATGTTGGGCCTGGGCCAGTG
GCGAAGCCAGCCTACAACGGTATTGGTGTCATCTCCATTTCGTTGGGGTC
ATTTTCTAATAATAAACAATATTTATCACTAATTTAGTAAGGATTTTCAT
TTGATCATTGGTGTCAATTGACCCTACTAATTGTACCTACCTCCGCCCCT
CTCGGCCACCTAGAGATCGTATTCTGGATTGTCCTGCTCAACGGTGTCCT
CACCCTTCTTGACGATGATCTGCTCCTCAAGTGCCACGCGAGTTCCATCT
AGAAACCCCAACATGTGCGCCCCACTTACATCAGGGACAACTTGGGCTTG
CCAGACGGCAAAGTTACCTTTTCCGAGCTTTTTTTGGTCACGCCAGAACC
AAAGGGAGAGGAGGCCGAAGCAGTCAAGGTTGAGGATGACATGGTCTCTC
GATCTCTCTATCAGACCGATCGGAATTGAAGCTAGATACGATTTCAGAAG
TATAGGTGGCTCTGATACCGTATAATGTTTTGGACTAAAGTGTCTTACTC
TGTTAGAAGCACACCTTGCATGTTTATATAGAGGTTTAAACAATCACCTT
GCATGTTTATATAGGTTGTTTACAAAACAGAAAACGAGATTTAGCCTAAC
AGCTGAGTCCTTATCTTGGACGTGTCTGTGTACAATTGTTTCACACGGCT
AAACTCTTGATATCGCTAACAGTGTCAAGCATAATCATGCTTGTTGACAC
ATACACATACACATACACTTGGAGCACCAAATACAAATTTAATCTTCCAC
CAAAATGACCACATACTAATGCGAACTCGATTCACGAAACTTGACACACG
TGCTATGCGCGGCATGGCGGGGTGGGCCACGGAGGAGTGCACGTGAACAA
CTCCCCTTCTCGCTTGCTTATTTCCTTTTTGTAACTTTTGGTATGTTTAT
TGACATTGACAAAAGTGTTGTCGAAGAACCACCATCACATTAGTATGAAA
TGTAATGTATTGTTTTTTTTAGAATAATGTATTGATGTTGCTTATCCTTT
TATCAATCTTCACGGCATGGCTTTGCATAATTAGCTCAAGAAGACTTGGC
ATTCCGCTTTATTTATGTATGAACCATTCCACACGGTAATTAACTATCCA
TAATTTTACCTCTAAAGAATAATTTTGGTGATAGCCAGCTGCACTCCCGC
TGGTGTTGTTTATTAATTGAAAATAATAAACACAATTCATCATTTTACCT
CTGAAGCGCAATTCATGGTGCACTCATGCAAGTGGTGGTAGTTGTTAATT
GGAAAATAATCACACATGACAATCTTCTAATCCCTCTATCCACGAAAGAG
TGTACTTCCAGCTTTCTTAGAAAGTCAAATTTTGTATGAGTTTGCAAAAA
AAAGGTAGCTATATGATGAAAATATATTTCATCATGAATTTAATTATACT
AATTTGGTGGCATAAATATTGGTGCATTTTTACATATACACCATCAAACT
TAAAGTATATTTGACTTTCTAAGAAAGTCACAATTGCACTCTTCCAGTTC
CTTGAATGGAGGGAGTACACCATTTTAGTAATAGCTAGCCACAATGAAAA
TGCTATGGGCCGGATGCAATTCTAACCTTTCACGGCTTCTCCAAGCTAAA
TACATGTTTTTTAAAACCATGATGTAGGTACTTTATTGTGGTTGATGATG
TATGGGATACAGAAGCATGGAAAACTATCAAGAATGCACTACCAAATAAT
AATTTGGGGAGCAGAATTATCACCACAACACGCAACAATGCAGTTGCATC
ATGTTGTTCTTCCCAACAAGGTGATTGTGTTTACACAATGAAGCCTCTCA
GTTTTACTGATTCCAAAAGGTTGCTTCTTAAAAGGGCATTTCATTGTGAG
GATTCATTCCATCCCCATTTAGAAAAAGTATCTAAGGAGATATTGGAAAA
ATGTGCTGGTCTACCATTGGCAATAATTACTATCTCTAGTTTGTTGGCTG
ATCAGTATGCAATAGATGAATGGAACAGGGTGCTCTCAGCTATTGGTTCT
GGGCTCTCGAACGACCCAAATGCAGAGAACATGAGAAAGATATTATATCT
TAGTTACATAGATCTTCCTCACCATTTGAGAACTTGTTTGTTGTACCTGA
GCATATTCCCTGAAGATTGTCGAATCAAGAAAGAGAGATTGATAAGTAGA
TGGATTGCCGAAGGGTTCATTCATGAAGAGCAAGGGAGAAGCACATATGA
AGTAGGGGAGAGGTATTTTAATGATCTCCTCAGTAGATGCTTGATCCAGC
CCGCATATGTGCATTATGGTGAGCCTGAAGCATGCCAAGTTCATGACATC
GTTCTTGATTTCATCACATGCAAAGCTACCGAAGAGAACTTCGTAACATC
ATTTGACGGAACAAACCATGGATTCAATTCAGATTATAGCGTCCGCAGGC
TTTCTTTGGAACATCCCAAAAATATTACCATACCAACAAGGCTTATACTT
TGCCAGGTCCGGTCACTTAGTATATTTGGGAATTCGAAGCAAGATCTTTT
GTTGAACTTCCCATCTCTTCGCGTGCTGGACTTAGGAGGATGTAACAACT
TAGAAGAAAATGTTATCGCGGATATTGAAAATATGTTTCTTCTGAAGTAC
TTAAGTCTCCGAGGGAGAATAACAATGCTCCCAAGACAACTTGAAGGACT
ACAATATATAGAAACATTGGACATAAAAGCTACCAAGATAACAGAACTGC
CATCAACCATTTCAAGGCTTCAGCGGTTGGCACGTCTATATGTTAATAAT
AAAACAAGATTTCCCGTTGGAATAATTGGACAGATGCGGAGCTTAGAAGA
GCTTTCAGAGTTTGGTGTCTTCTCCTGTGAAATTGCCCTGCATCTACAAC
AATTTGCTCAGCTAACCACACTGAGGAGACTGACAGTAAGAATTTGTGTT
GCATATTGGGAATTGAAAGGAAGACAACTTGAAGACTTCAATAGTTATGT
AGGTACCTTAATATCTTCACGCAGTCTTCATCATCTATATTTCACCGGCA
TGGAAAAAAGAACCAATACCTACTATCCAGTGTCACTAGAGTCGTGGTGC
CCTATTACTCCCTGTAGCCTCCGCAAGCTCAGACTTCAAGGTTGTCTCTC
TCTACACGTTCCAAATTGGATGTCCTCATTTGGGAACCTTACGGAATTGG
TGCTCAATATATTTTGCATGAGACCAGTAGATATTTCAGTCCTTGGTACT
ATGCCCACTTTGATTCATCTAGGATTATCCACTGTGTACGGTTCCAATGG
GAGGATACTTATCCGTGGGTTCACATGTTTGAAATACTTTAGCCTAGATG
TGTCAAAGTGCGGCACAGCTGTGGAGTTTGAAGCTGGATCAATGCAAAAG
GTTGAACACCTCAGGATGATTTTCCCTCTGCATTCCATCAAGTGCGTAAA
TGGTCTTTGTGATTTTGGCATCTGGCACCTCCCTTCCCTAACCAACATCG
AGATCGCTGTAGTGTCTAACGGAGAGGGGGTGGCGCATGGTGAGGCTAGA
AGAATTGTTGAAGGTGTCGTAGGTGCACTTTCCATAAGCCCCAGTATAGT
TATATTCAGTGGTCGCGAGTGTGAGCATTTCGAACATGTTTTGATGCGGG
TAAGTTAGCTGTCATGATATATTAAACTGCTGGCACGGATTGGTCGAGTC
CATCTCAATTTTACATATTGTACAGGCTCTCATTATTAATTTGTTTCCAT
TTTTTCTTTTGGTTTTTGAAAAAAAAAAGTACCTAGATGATAATGGTTCG
CTGCCGGAGGGTATTGAAATTCATGATATTGAAGCCACGCGTGGAGAGAT
GGTAAGAATAAAGGAGCTGAAGGAGCAGATGTTAAGAATAAAGCAGCTGA
AACGAGAGGAAGAATGGGGCGTCAAGGGCAAGAAAAAGGGTTTTGCCTCA
ACCAGGGCACCACCACCTGGTACGTACGTACTGGTGCTAGTCATGCATCT
CATTCCCTGATCTCTTGTACATCTCTCACTGCACTGAACTTTTGCTTTGC
CGGACATGCACCGTACGTGAGCTCAAACGTTAATTAGATAGAGAGAAGTC
TCCTCACCCTAAAACCCTGATCGGAATGAAAGTTCAGGGCATTTTGTTTA
GAAAATGGGAAAGCCCCAGCCTTTAATAGCGTTGCTTCTGATTTCGGTGC
AGTTTCCCTGTTAGGTGCTCAAGACCCTGACAGCATCCAAAACAGCGAAC
AAGCAGAGGGAGGGGGCTTACTACGGCCATGGTGAGCGGCAGCACCGACA
CAAGTGAACCTGTTGTCGCCCGCCCGTTCTTCGCGGCCGTACGTCCTGCT
GCTACTGCAATGTTAGGTAAGAGCAATCTACTAGTACTCCTCACCCCTTT
CAAGACACACGTACGGCGTGCCAATTACTCTCTTTGCTTGTATGATTCAT
TCCTCGCCAATTACTCTCTTTGCTTGTATGATTCATTCCTCCTACAACTA
TCTACTGATGACTATGTTTATAATCCTTTAGTGCCGCCCCTTGATGATGT
CTACCTTGCCAAATGTAAATCTACATCGCACAAGAGTCATGTGTGCGCCA
CCAGCAATAATAGAGGCCAAGGACACCATGCCAAAGCTGCGCTACAACCG
CCGCTTCGCCTCGACGCGGCTCAAGACCCCCTCGTCCTCACAGAGGCCAT
GTCTTCATCCGTCCATCCATCCTCTCCATGAACGAGCCTATACATACTAG
CCAGCCTGTCTGGTTTACTTCAACATCTCGTGGTTCCATTCTTGTGTGTG
TTTTCCAAAACGTAATGTACTAATTAAATGTGTGCCATTTTACCCTGTTA
CGGGGAGGTAACATAGAGAGCTCATGGATTTTCTAACGCCGTCTGAAGAC
TCTCGGCCCCGGCGGTGTGATGATCTTCTACGTACTGTTAGCATCAGTTT
GTTTTCCATGTTTGTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.