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GrainGenes Sequence Report: AA043335

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Sequence
AA043335
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA043335
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CGAGGCGAGACCCAAGTCGTCGTCTTCGTCTTCCACTCCCACTAGCCACT
CTCGCACGCGCTTTCGAGCTTCGACTGCACCGCCAGCCAACTCTCTTGAT
CTGCTGCCTCCGGCCACCCCCACTGCATCTGCATCCCAGTGTTCCGCCAG
CCACATTGGGGTTCCGCCGGTTCAGTCTACTGCTACCGACGCGAACCGAG
CCGCCGCCGTTTGCTTCAGTTCACCCACGACCGACCGCGGCGGTTGCCCG
GAGTCGGCCACCGTCGACCTCAACTCCGTCTTCGGATCCCGCCACACGGC
ACCCCTTGCCTTCCATTGGCCATATCCGTCACGGAGGACGCGGAGCCTGC
CAAGCCGTTCCCCTCCACCCGGCCTCGCTGAGGGCGGCGACGACCACGGC
ACGGAGGCACACGGTGGCGAGCGGAGGTGAGTGGGGGATTAACTTAGACA
CCTCCTCTGCATCGTTATCATTCCATATCAACCAGATTCGTTTTAGGCAT
CAGTAGATGCTGCATTGCAGTTGTTTGAGACAGTGCACTGTGTACATTTT
AGGAAATCAGTAGGCGCCTGTTGCATTTTGCAGGTTAGGCATGATCCATT
TGCTTAGCCTAGGTCGAGCTCGAGAAGTAGATTGGGCTATCCAATCAGTA
GCTGCTGCGATACGGTTTTAGGGATTAGATTGGGCACTGTGTAACTAGAT
TCATTTAGGCGCATCAGTAGTTCAGAAAAACCAATGGCCCTTTTTTCTTG
TGTGGCTGCAACAAGATTCATTTTAGGCGCATATTCATTATGCAAATACA
GCTAGCAGAAATAAACCAGATTTGTTATGCTGCATCCGTAGCTGCTGCAT
GTGTGGTTTCAGCCATTCAGCATGATGCATTGGCTTCGGTCGAGGCGTGG
ACTGTGGTATTGGGTTACTGATTCTTGCTCCTGCTGCAGGAAGTAAGGAC
AGCGGCGCTGCGAGGCAAGAAGACGAGAAAACTCTGCTAGTTCAAGGGAC
GAAGAGAGACCAGCTCGATCGCTACTCATGGAGGCCACCGGCGTGAGCAT
CGGCAAGTCCGTGGTGATCGGGGCGCTCAGCTACGCCAAATCTGCCGTTG
CCGAGGAGGTGGCCTTACAGCTCGGTGTCCAGCGCGACAAGACCTTTGTC
ATTGGCGAGCTAGAGATGATGAATTCTTTCCTAATGGTGGCGCACGATGA
GCGAGACGATCACAGCCAGGTGGTGAGGACCTGGGTGAAGCAGGTCCGTG
ACGTTGCCTACGACGTCGAGGACTCCCTTCAGGATTTCGTCGTTTGTCTC
CAGAAGCAGAAGCGGTCTTGGTGGCGTGTCTCTCGCGCACTCCTCGATCG
GCGCCATGTCGCCAAGAAGATGAAGGACTTGCGTGCCAAGGTAGAGGACG
TCAGCCAGAGGAATGTGCGCTACCACCTCATCAAGGGCTCAAGCTCCACT
GAGCCTGCTACTGTTGCTTCTGCTGCCATGTTTGGTGTTGAAGAAGCAAG
GCAAGCCGCAAAGCAGCACCAATCAAGACTGGATCTTTCCCAACTGATCA
ACAAGGAGGGTGACGATCGTAGAGTGATTGGTGTTTGGGGAACAAGTGGC
AGCGTTGGGCATACCTCCATCATCTGTGAGGCCTACGAGAATCCAATTGT
CAAATTGAACTTTCCATGCCGAGCTTGGGTCAGGGTGGCACGTCCTTTCC
GTCCAAAAGATTTCATCCAGAGTATATTGAAGCAGTTTAGAGCGGTGGTA
GGGGTGACTGATATTATGCTGGAGCTGGAGGAGGAGAAGAAGGGGCATGA
GTTAGCTCTTGAGTACAATAGATATGTCAATAAGAAGAGGTATCTAGTTG
TGCTTACTGAACTATCAACTATCGAAGAATGGCACCAGATCAAAGCTTGC
ATCCCGGAGAACAAACTAGGGAGCCGTATCATAGTATCCACGGAGCAAGT
TGAAGTTGCAAGCCTATCCCCTGGCCAAGATAGTATGGTGTCAGTGCTCA
AGCAATTGTCGGCTGATCAGACCATCTATGCTTTCTATAACCAGGTGCTA
ATTCAATTTCAAACTCACCTTACCCATAGAATAATATAAATTTCAGACCA
TTTTTTGTTACCATTCATCTAAAAATCTCGGTTCAAAATGCGACTGTTTA
TTTGTTGACACAAGTATGAAATCCACTATGTGTTGTATGGTTTTCGGTCG
GATTTCCTTATAAATTGTCCACCTCTTTTTTGACTTAATTAATCAAAGGC
ATTGCCTACGTTCGAAAATAAGATATATTTGTTAATTTTTCTGAAATTTA
TAAACAAGTGTTTGTTTCCTAGTTAACTAATACTATCTCTACCTAGCTTC
ATATTAATATGGCATAAGCAACAAAGGTATATATGTAAATGTCTATAATA
AATATAATGCATCTTTACTATTTACGCTTAAAAAAGGTAAAGAAGAAGAA
GAAATCAGGCTCAGATATAATACCTCATAACAAAACACACTAGTAAGGTG
AAAGACAAAAGAGTAATGTAAATGGTAAATGTGGATTTGAACACATCACC
TGCGACTAAGACATGCAAATCCTCAATAACCAGTAAGACTACAGGTTCTT
TGTGAATAGTTTCAGATGTACCACTAGTAATAGTTATAGTTGAATAATTT
TTAGTATTCTTTCATTTTATCCTATATGTAATGTGCAAGGCTGGGCTCAG
GGTATGCCGTGGCATACCCTGTGGGTCAACCCCTGCCACTATGCATCATG
GAATGTGTATAGGTATCTACGAGAGGTTTTACCCCAAGGGAGTAGTGGCC
AATGGTGATCCCAGATTGTTCAGAAAAAGAAGGGTAATTCGGGATAGGGA
TCATGCCCGCTAAGATCAATTTGTGTGTTTGGACAAGGCCGGGAAGGGGA
AATTCTCTCACATTCCCAACCCCTCGATTCCCGTAGAGTTTAAATTACAA
CCCTCACGTGCAACCGTCTAAAATACTCTCCTCCAATCTTCACCTGTTTT
ATCATACTTGGCATCCACATCCATTTTTCTCTTTTTTGGTGAGAACAACT
TAAAATCTTTTTCTCCTCTTGTATGTAAATGTCTGAAGTTTGAACAGTGG
ACTCAGGTAGTTACTTGTTTTATTTTTCTGTAATTTTTTCAAAAGTTTCT
AAACAGTTTGATTTTCCATCAAAAAATCGAAGCAACAACTTAAAGAAGGT
GATCTCCCAAACTGTCTGTGCAAATTATTAAAAAGTCGAGCGGTGATTTT
TTTGTTAAAAAAATTGTGGACCCAGAAAAATTTGTGGAGCAGAATGCTGG
TCCACTAAGAGGCAACACATCCAATAGATGAGTGTTGCAGAGATGCGTAT
GCTAAGGTTGATTTGTGGCCACACAAGAAAAGACCGGATTAGGAATGAAG
TGATACACAATAAGATAGGGGTGGCGCCAATTGAAGAGAAGCTTGTCCCA
CACAGATTACGGTGGTTTGGGCATGTCCAGCGGAGGCCACCAGAAGCACT
GGTTACCAGTGGTATTCTAAGGGCTATCGGTAATGCCAAGAGAGGTAGAG
GTCGACCAAAGTTGACAGGGAGGAGGCAATTAGAAGGGACCTGAAGGACT
GGAATGTACCTAGAGATTTGGCTTTTGATAGGGCTGCCTGGAAATCAGCA
ATTCATGTGCCCACCTTGATTTACTTTTTTTCTCTTTTATTTTACTTACA
CTTTCCACTAATTTCTTCTTGACTTGCACTTTTCACTAGTTTCTGCCATT
GCACTTTCCACTAGTTTCTGTTTGGTTTCATATCTAGACTACCCCAACTT
GCTTGGGATAAAAGGCTTGGTTGTTGTAATGAAAATCTGGTCAGAGTTAG
TGATGAAGGTGCTCATTACAATGATTTGTTGCATACCTGTTAATGAATCT
TGGGTTGTAGGTAGTGAGACTTCATGTTCTCAGGACGGGGCCATCTGAGC
AGGACTGACTGTATACATGCCATTCAGGCTTGATTTACTTGGTTCATTGT
GTTATTAATATTTCTCTGTGGCAGTAAGACATATGCACTAAGCTGATTCC
TCAGTATTTATTTTTGAATGATTCATCGCTGAAAATGTGTAACTATTGTT
TGCTTGTGTTCAGAGTTCTCATGATGCAACAAATTCATGGAAGCCAACAT
CTAGCTCAAAGTTATCCTACACTGCTGAGAATGAGATAGTAGAAGACCAA
TCTAATACTGATGATGATGGAAAGATGATGGTGCAAGAGAGACTCACACG
GGTAAACACGATGTCAAGTGTTCTGGAGGAATTTCAGCTTATTGGCCGTG
GGAAAGAAAAATCTGATATTATCGAACTAATTCGAGAACAAGCTAGCACC
GAGCAATTTGAGGTGATCGCACTGTGGGGAATGGGTGGCCTTGGGAAAAC
CACTCTGATCAAAGATGTTCAGCAGAGAAAAGAGGTCAGCAACATGTTTG
AGAAACATGCTTTTGTCACGGTCTTACGTCCATTCAAGCTTGAGGAGCTC
CTTAGGAGCTTGGCAGTGCAATTAGATGCAAGGAAGGGGGTCATGGACTT
TGCAGGTGACACCCAAAAAAATATTGCTTCGATGGGAGTTCCAGAGTTGA
CTAAAGTGTTGGTCAGGCTTTCAGAAGGAAATAGTTGCTTGATTGTTCTG
GATGACCTCTCATCTACAACAGAGTGGGATTTAATATTTCCATGTTTATT
TGCAATGAAAAATGCAAGCTTGGTCGTTGTGATTACCACACGCCGAGAGG
ATATCGCTAAGCATTGTTGCAAAAGGCCAAAGTGCATACGCTTGCTCAAC
TGCCTAGAAGAAAAGGACGCCTTTTTCCTCTTAACAAAAAAGGTATTGAA
AGAGTATTACTCACATATTCACTTTATCGGTTGGCCACAAAAAAATTTCA
CATTAATTTTGAAGGGTCATTTCAGATCGATGTATTGTAAAAACAACACT
ACCAACCCTCTTTAGAATGATACTTCAGAGTGCGTGGTGAAAATATAAGA
TTAGGCCACAACAGGCCATGGTGTATGGTCATCATTTAGGAATGATATAC
TTTCGAGCCCTTCAACAATTAAACCAAAAAACTGATTAACACCCACTGCC
TGGGTTAGACCAGGTTAGGATTAGCAACAAATGCCATGACTTCACCATTT
CTGTTATTAAATAGTACAGAAACAAGGATTTAGAAGAATCGTTTGAATTG
TTGAAAACTAAGGTGTGTTGATATGAACATCATACTGAACGTGTATTTCT
CTTTTCCCCCTTTAAACTTTGCAAAATCACATACTCAACTTTTAAAAATT
ACAAAAAGAAAAATCATACACGCAGAGAATGGATTGACACATGGCGATGT
AAATTTCGTATAAAATTGTGTTTGAGAGACGTTCAAACTAAGTTACTACT
TAACTCTTATATTAGTACATTGCAATACATATAGAGCATGGCTTTGTAAT
ATATATAATTAACACGTACAGAACTATGTCATGGCCTAGTTTATTGCCAT
ATCACTACAAGAGAGTAGCAAAACAAAAGGACATTGTTACATGAGTATTA
TGGTGGAGAATCCGGGTGCTATGCGCCCTGATAATTTAAAAATTCGAAAA
ATGTTATTTAAATGTTTCAAAAAAATTGACATAATTCATGCACATACATG
TCACTTTGATACTTACTCCTGCAAATTTTCAAGAAAAAATACGACCGTAT
ATGACATACACAAAAAAGAGAAATTGAAACTTTGTTATACGGTGCATAGT
GTACATACACTTCTTATATTGTGAACAGTTCAATTTGTCATTTTCGTCTG
GGTTACATACTTTAATATTTATAAGAATGAGACTTGATATACATATACCT
TCACATATTATCTACACGCAAGATTTATGCCGTATTTTTTAATTAATTTT
ATTACCATGTGCCCGGGAGCCAAAAATTCACGTCCCTAACAAGACTGGTT
TACACCTGATTCATTTAATAGACCAGTAAAAAGATGTACTAAATACATTT
CACACAATTGCAGGTATTTAAGAATAAGAACACAGATTTGGCCAAGGACT
ATCCTGAGCTGGTTGAACCCGCAAAGCTGATACTAAAAAGGTGCAATGGG
CTTCCTCTTGCGATAGTCACCATAGGTGGCTTCTTGGCAGACCAACCAAC
AAAAACTGCTGCGGGGTGGAGGAAACTGAATGAGCATATCGGTGTTGAGC
TGGAGATGAATACGAAGTTTGAGGCCATAAAAACAGTCCTCATGAAGAGT
TATGATGGACTACCCTATTACCTCAAGTCTTGTTTCCTGTATTTTTCCAT
ATTTCCTGAAGACCGCAATGTTAAGAGGAGACGTTTAGTGTGCCGATGGA
TCGCAGAAGGCTACGCCCAGGACACATCCGTAGCGGACATATACTTCATG
GAACTTGTAGAGAGAAGCATGGTATTACCAACTCGGAATTCAGTTTGCAG
CATACAAGGTATTGACTCATGCCAGCTACACGATATGATCCGTGATATCA
GCATTGCAAAATCAATGGAGGAAAATCTTGTTTTCAGGCTGGAGGAAGGG
TGCAGACCGAACACTCACGGTGCAGTGCGCCACCTTTCCATAAGCAGCAA
TTGGAAGGGAGATAAGCGTGAGTTTGAGAGAACCGTGGAGTTGTCCTGTA
TACGGTCATTGACGTTGTTTGGCCAGTGGAGGCCATTTTACTTGTCTGAT
AAGATGAGGTTTCTCCGGGTGTTGGACCTAGAAGGAACGGATGATCTAGC
TGATCATCACCTTGAGCACATTGGGAAGCTTCTTCATCTGAGATATCTTT
CTCTAAGAGGGTGCAGCTTCATCTATCACCTTCCAAAATCGTTGGGTAAC
CTGAGTCAGCTCGAGACAATGGACATAAAAAATACAAAGATATCGACGCT
GCCCAAAACCATCACCAATCTTACGAAGCTTCGTTTTCTACACGCTGGCT
GGATTTTTGGTGTTAAGTTGCCAAGTGGAATGCGGAAACTGGAAACCCTG
CACACGCTGCATTTTGCGTATCTTGGAAGAGGGAAAGTAGTTGTACAAGA
GATAAAAAGTCTCACCAGCCTGCGCAAGTTAGGAGTGCATGTCATCAACA
AGGAGAATGGTTTGGAGTTATGTTCAGCCATTTCGTCCCATCTCAGTCGC
CTCGAGTATTTGTCAGTGGTGTCAGACGGAGTAGATTTGTGTGACTGTTT
TGATGCCATGTCCTTGCCTCCGGAAAACCTCCAGTGCCTCAAGCTGTGTG
GCAATATGAGCAGACTGCCTGGATGGATCAAGGGTCTCCGGAATCTCGTG
AAGCTTAAACTAAAAGGCAGCAAGCTATCATGGGACCATGCAACAATGGA
ATCCCTTGGGAACCTACCAAACCTATCTATTCTGGGTTTTTCGAGGCCAT
CTCCGGATGATGAATCTATTTTTTTCCCAAGTGGCCTTTACAGAAGCCTC
GTGGTACTCGATCTTGGGTACATGTGGGGATCAGTGAATTTTGAGCCCAC
ATCAATGCCGAAACTTGAGGTGCTGAGGCTGCAACTTGTGGGTTCTACAG
GTGGCTTTTCTGGGTTGGAATTTCTCCCAAGCATCAAGGAAGTAGTACTC
CTTGTGACGTTTGAAGAAGCACACAGTGAAAACGAACTAAAGGAGGACAT
TGCGAAGCAGCTCGCCAGCAATCAAAATAGACCCATCGTGAAGGTGGAAT
TACGAAGATAGGACCATCCTCTGCTTGCTTTGACTGTTTTGTGAACCTAT
CGTGCCGAGAGCAAGACAGGAGGATCTGGGGGTATTTTCTTTCCACTCAA
ACCTACCACCACTCTAGAGGCCATCCTCTTCCACATCCCCTCCCTCCCTT
TTCCGTCCCCTTCACCAACTACGACAGCAGCAAGAGAAGGTGTCTCATCG
CGGGACAAGTGGGTGTCAAGCCCAAGTTTCTCGTCAGAGGGCGGGGCCTC
GAGGAGAACATGGCCAGCATCAGCAGGTGCAGAGGCTCACGGCCGCGGTG
CAAGAGAACAGGCGTCAGCAGCAGGCGTATGGCGGGCTTGAGCTCCTTCG
CCGGTGCGCTTCACGCTGGAAGGGAGTGTGGAGAACCAGCAGTTGCCAAG
TGCGCAGGCGATGCGTGTGGATTGGCAGCAAGCACACTGCTTTGCGCCGG
TCGGGGAGGGGAGCCAAGGTGATCCTTTCATGCGGCCAAGGGTGGAGCTA
TACATCGCCCCTCATTCCAGAGAAATGGAGGACGCCAAGGAGGCACTGCG
GTGGAGCGCAGTGGCATTCGTCTCCGGCGCGCCATATCCATGTCCCCGTC
AGGGCTGCGTTGAACTTGATCAACGACAAGCTTGGGGTCAAGGGGAAACA
CTTCTCAGCTCACATTTTCTGGCCTACTGATTTCCTGTTTGTTTTCCGAA
GCCAGGAGCACCCAGATGCGGCGATCATAGAAGGGATGATATATGGCAAG
GGCTGCGAAATCAAGTCAGTGAAATTTGTGCCAACATTAGTGCCGGAACT
TGAGGTGCTGAGGCTGCAACTTTATTGTTCACCTGGCTTTTCTGGCATCC
AATTCCTCCCTAGCATCAAGGACGTATGGCTCCGTGTCAAGAGGTTCTCA
CAAGTTCTTTCCACCGAGGGCTAAGTATGACCGACACCTGAAGCATGTAC
TGCGGCAAAACGCAGAGAAAACAAAGTCAAGGAGGATGCTGGGAAGCAGC
TTGCTAGCAATAAAAATAGAGCCATTCTGAAGGTGATATAAGTGAGCTTA
AGTCGACCTACTGCTTGGTTGACTGTTTTGTGGACCTACTATATATGCAG
CGGCAGGAAGATCCGGGGGCATATGTCAGCACAGAGCCTCATGTTGGGGC
CTTTGACAGTGCATTTGTTTATGTTCTGGTATAGTCTAACTCTTCTGTAA
CAGGCTGTGTAATTTCTTAGTATTCAGTTCCGATATAGCTTGTTACCTTC
TTCCTTGTTCCTGCCTTCGGGCAATAACTCTGCAGTATTCATGCTGATGT
AGCCTGTCACTCTGCCATGTATATATCAGCCGAAGCATGTAATCAATCTT
GCACAATCTGTAGTGTTCTCCTACAGTGGCGGCTGAGGCCTGCTGAGAGG
AAACATCAGCAGCTCAAGCTTTTCTGTGATCAGCAGCGCGATGTGTACAG
AGGAGAGTCCACTCTGCTCTGAAGCTTTTCTGTGATCAGCAGCTGTTTTC
TCTTCTCATCAATCTTGTCGGGTGTGCAAACACCTGATGTCATCGATCTT
CAGAAGCTATAGATGAAAGATAAACCAAAAGGCTGCTACATATACCAGGT
GAGGACTTCCCTTCAATTATGTTGCATTAATTTCGGGCCAGTTCATAACC
AATATTCTGTTCTTTTTCATCTGAAGATTCTTTAGCAGAAAGAGGAAAAA
ATTGCACCTGGGGAACTCTATGGATCAAGGCATACGTATGTAACACGAAT
AAAAGCAAAGTTATCTGTACAGTTTTTTATGATTGATTCCTGTTTCAATT
CAACCATATGGAGAACTCATTTTGTATCTTGTTGCTTTTACAGGTATGTC
GTCGGGCCACAGGATAAAGCTATGGTTAAAACAGTGAGCTTTCAAGTCCC
CTGCACCATGTGTCCAAGTACTCCTGTCCCATCCATATGCTTTAACGGTT
TATTGAGCTTTGCTTTGCGGTTCTCTTTTTCAGGTTGATCTTCTTAAAAA
TCAAAAGTCCGATAAAGTGGATGTCACCATACATTCTGAGGAACTCGAAG
TTATGGATGATGTTTTGGCGGCCAAGTAAGAATACACTCAGCTTTTGTGT
ATGTGCCTGTCAGTAGCTGCCAGCCAAATGTTAACGCCTTCCCTTGAAAA
CTGTGAAACAGGTATGAAGAAGCACGAGAGGAGGAAAAGCTGTCGGAACC
AGAAGGAAGATTTCAGCGACATGGTGGCGGAGGTACCTTTTTACGTTCCT
TGCAATGTAGCTGTTCAACTAGAGGCATATACCGGTTTGATCGGCCTGTA
CCTTATATATTTTCTCGATTTTTCAGAATGCGAGCAAGAGGAAGAGGAAG
CACGACAAGGATGGGAAATCATTGAAAAAAAAGGACTTCAAGTTTTTGAT
GGCGTCATCGTCGTTTCCCTTCCGTTTCCCAGGAGGAAGTTTACATTTCT
TGTTGTAGCCTGTACTTCTAAGATGTATGTGTATCGTATGCATGGGAGAA
CTAGTTGTCCGTCGATCGTCGTAGCAATCAGCCCGTCCCTTTGGCTTGAT
GGAACGAACCAAATAGATGAAAATGAATGCGGTTGTAGTCCATAATATAA
TGCTGTTGTGTTGAAGAGTAAACCAACTTCGTTGAGTAACATGATGGTGC
AAAATATCCTTTTAGGCCTTGTTTACTTCTAGGGTATTTGAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.