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GrainGenes Sequence Report: AA037343

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Sequence
AA037343
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA037343
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CGCAAAGCAAAAAAGAAAGGAAAATGCTCCTAGCAGCTCCGGCCCGAAAC
CTGGCCCGGCGGCCTGAGGTTTGCCCAGGCGTCGTAGATAAGGAAAACTC
CTGATCTATCGATTGTGAGCGGACCCGTCCTCTTCCCCAAACTCAATCCA
GCGAGCACAGGGTCGCCGGCTCGCCGCGGCGATGATAGTTGCTACTGCCG
GTTCGGCCCTCGCGAGGCCCGCTGCGGCCTTCCTCCGCACGGACAGCACG
CGTCTCCTTTCTCCTGGAGACGCGCTGGCGGGCAACGCTTCTCAATCGAC
TAGCGGCTGCCGCGTCGCGCGCGGCGGCGGCGCACGGAGGCCGCACATCT
CATTCGCAGCAGGAGGAGGCGCCGGTGAGGAGCCATTGCTACGATATCCT
TTTTATGTGTACCTTTATGTACCAAAAGCCACATGCATTTTGGTCTTCTA
AAACGAACTGGGTAACCGAAATACTCACACAGGATTTTTTTTTTACCTAA
TGTATGGTTTTGTATACTAGAATGTGGAGAATAGCTGTCTGTAACTTTGA
TGCAGAGGCCGGGAAAAGTTCTCTTCCATCATCTAGAAAAATATAAGAGT
AGAAATGTATATGAGAATGATGATAGTATTGAATTTGAAATGTTGTTTGT
TTAAGTAACGCGGGGATTATTGGAAAAGATGCTCTGGCCCCCATTTTACG
TTTTAAGTTCTCCCTTTGCATGGCATAGCTGATTTAAGCATCTACTTTCT
AGCAAACTAGGTCCCAGTTAGGAATACTCTAATGCACTACCATGTTTCTC
ATAAGTTACCCGCATGGAAGGTCTCGATGATGCCAAGAGCAGGACGACCC
AGAAAACGCCTCACGACGCGTCAAGCGTTGATCGAGCGCAGCTGGATAAT
TGACATCTTGGGGGCTCTAAGCCCAATTTCCCTTTGGCAATATGTCCAAC
TGTTGATCAAGCTGCGGGACGTGCAGCTTACGGTGTGCCAGACAAGCTTG
TCTGGCGGTGGACAGTCGACAGTCAGTTCTCCTCCCGTTCCTGTTATAAC
GCCCTCTTTCAGGCGACGGTTGTCTCGGGGTCTCGGAAATTGAACTGGAA
GTCATGAGTGCCACCTAGGGTGAAATTCTTTGTCTAGCTAGCTTGCCAAG
ACAGGTGTTGGACGGGTGAGTGGCTCGTGTGACATGACCTTCCACACCCG
CTGAGATGTCCACTGTGGGATCAGTCAGAGGAGACTATGGCGCACGTCCT
TACCGGTTGCCCTTTTTCGAGGACAATCTGGTACGAGGTACTGTCATGAT
TCGATCTACTGCAAGACCTCCCATTGTTGAGGGTGATTTCGTGGAGTGGT
GGTGCGATCCAACCCTCGCTAGATGTGCAAAGGCACCTCGTCGCTGGTTA
TGCTCACAACATGGTGCATTTGGAAGCTTAGGAAGGCGGTTGTCTTCGAC
AATCTTCACCCCTCACCCCTCGGTGGCTTCCCTAACGGACACGATTAATG
CTGAGGCGATATCGTGGGCTAGTGGGGGAGCATGGGAGCTTCGCCAGCTA
CTCCCTTAGATTAGGCATCTTGGGTTGAGTTGTATGGCGTGGGTGTTGGT
CCTCCTTTGGACTTGTACATATAACTTCTTTATCTATTAATGCATCGAAA
CACAATGCTTTTTGCGTTTTCGTGAAAAAAAAATCTGCAATTAAATTTCT
CCTTGTTGGGTTTCGCCCAGGGATTGATCAAATCAAATAATACGAGCAAC
AAACTTCGCCAAAGGCAGGTCTTGTTTCTCTTGTTTTTCCTTCTTTGGTT
CTCTCAAATCCAGAGTACAATCTATTGGTCTCATACAGTGTTAGAAAACT
GAAGTGGCTGGTGTGCTTATATTTATACACACACAATCAGCTATACCATG
TCCTACCCGGACTGACTAGTGCAAAGTCATATGCAACTAGGACTTGACTC
TAAACCAGACTCAATATTGTTGCTTTCCTAATCTAATCACACGGCATCCC
TGAACATCATTTTAACAAAAACTGACTTGTACTCACTTGAACACAGCTAA
ACTCAATTCACATACGGCGTGCAAGCCGGTACCAACTAGAACATGGAAAC
TAATTCCAACTCGCATCTAGGATTGTGGAGAATTTTGATTGTTGTTACAG
CACCTGTTCATACACTTAAACTGGTGCTATCTTCTATGACCCAGTGCTGC
TAGTCCCAGTTGATCAATGGTGTCATTTGGTACGACAAGTATCAACAAGG
AGGCATACATAGTTGGACCCAATACTAACATATCTTCGTGCAGATCAATA
ACTTGCAAAATAGTAAATACATAACAAGGAGGCATATGTAGTAGAAGAAA
AACCATGCCGGGCCAACTTCAAGTCTTAAACATACTTCAAGGACACTCAT
TCAATTGTAGTGGATATGTAACCAAAATATCACAACTATTAGGCTGCAAA
ACCTGTTATGTTGTCTTTCACACTTCACAGAAGAGGCTGTGAAATTATTT
TTTGTGCTAGTTCTTAAGTTTGCCCGATGTAACTTATTTCTTGAAATGTT
ATTCAAGATTAACTTTCAACCTTTTAATCATAAATCATAAAGTTGACTCA
TCATTCTTATTTGTACTTTGGCTGTAGTTGGTGATGCTTTTGTCGTAGAA
GGCACAACAAATGTGAAGTTCTCTAGAGAATTAATGGTTCCAGGATCCAC
AGAGCCTTTAATCATCCTTGGCACAGGTACATTTTCTTGCCCATGTTCTG
TTGAGATTAAAATTTGCAGTTTGGCACTACTTTCTTCACCTCCATATCCT
AGTGATATAAGAATATCACTCTTTTCCATTTTTTTTTGTTTCTAACAAAC
CAATAGTCCAATAGTATTAGTTATGCACAAACATGTAACTTTTTATCCAT
TAATTTGATTGGCGCAATAGGAAGAACAATTTGAATTTTTTTGCTATGTA
TTCCTGCAGAAGTTATTAAACTGAATGAATTTAGCAAAAAAAAAAAGTTT
GCACAAGCAGTTGCGCTACATATTTCAAATTTCTAAAATGCTATTGTTTG
TGCTATAGTTCATACTTTATTCGTGGTTGTTGTACAAACAATATTTGTGC
AGTGACTTCAATATATTACACTAATATGCTAGAGATCATGAAATGCTGTA
TTAGGTGTAAACAGACAGGGGGGACCAGAAAAAAACGCTTCGGCCTGTCT
CGCGTCGCCCCCGCGGGCGACCGAGCAGGCGACCAACCCCCCGTGTCTTT
TAGCGCCTCCCTCACCTCCCTCTCCTCCTCCGCCGCCGGCGTGAGCCGCC
GGGCGAAGCCTGCGCGGTGCCGGCGGGCGCGACGCGAGACAGGCGACCAA
CCCCGTGTCTTTTAGCGCCTCCCTCACCTCCCTCTCCTCCTCCGCCGCCG
ACGTGAGCCGCCGGGCGAAGCCTGCGCGGTGCCGGCGGCGGGGGCCTGCT
TCTCCTCGCGTGGTAGAGGTCTGGCGCGGGACGTTCCGGCTACCGGCGGT
TGTCCAAGATGGCAGCAGGAGCTCGCCTCGGTGGGGAGTTGGCGGCGGCG
GAGGACTTCACCTGGGCGGCAGGAGTGGCGGTGGTCTGCGAGGTCCACTC
GGGTACTCGCGACGGTGCGGCGGCGAGGAGTGCCTGGCCTGATTTGAGCC
CTAGTTGGGCCAGATCTGGGGCAGGGCCTTGCGCGGGGCGGCGCAGGTGG
AACTGTAGGATTGCTGGCCTTCGGCGTGCGGCTGGGTGTGCGGGGCGCCC
CTCCCTGGGGGTGGCGCGGCAGTGGCTGCTCGACCCGGGCCAGGCGGGCC
TAGGTCGGGTGCCTGCCCCGTAGATCTGGCATGGTAGATGGCCTGACCAG
GGCCAGGTGGGCTTAGGTCGGGCCTCTCCTGTTGCCGTTCTGGCTCTGCG
GTACGTGCGGTGAAACCCGCAATGCCCACTCCGTGCCTTGTCCGTATGGC
CCGGATCCGGACCTCGTGGGTCTGGAATTGGTGCTGACGCTTTTTGCCCG
TCCAAGTGAGACCGAGGTGGTCAATGCTATGCCTTGCTGAGCGAGAGTGT
TCCTCAGACCGACGGTGGTCCGACTGGCATGGGTGTGCTCGGTGGCGACG
GAGCTGCTACTTGGCGGTTGGGATCTGCAGTGGTGGCGGATCTCTTGGGG
GGCGAAGGAGCAGGGCCTAGTGCTGGGTTGGTATGCACGGGGGCACTCTT
GCTGCAGTGCGGCGGTGGGGCTTCACGAGCCTTTTCGGGCTCGGCTAGGC
CAGAGAGGGCCTGGTTTGCCCTGTTGTTGTATCCGGTCGGCTACTGCTTT
CGGGTGGTGGAGGTAGTTCCCTTCCGCGTGCTGATGTCATGCCATCCCTC
GCCGAAGCGTCCTCTCTGTTCAGTCCTCCAGACCTCACACCGAAGGCACG
GTGAGACGGCGGTGGTGGCTTCAAGTCCGTGGTGGCGTGTGCTTGTGGGC
GGCGAGTTTGGTGGAGCAGTCCGAAGCGTCCGGGAGTGTGGTTTTTTGAG
GGGTCGGGAGAAATCCTTGTCGTCTTGACACCGACGTGGTGACGCCCACG
GGTGTCGCCGTCCTTACTGAAGGACGTCGGGTATATCTCTTCCCCATCTC
TTGTAACGTATCGGGGGAAACCCTAGGACATGTCCGGGCAGCAGCGTCGT
TGTCGTCGCTTTCCTTCTTGGAGGTGTTGCTTGGTACGTGACGTTTCGGA
GCGCTGGGAGCAGGGTGGTACTTCTTTGGAGGGCGCAGCGGGGGCGGGTC
ATCCTCGTTTTCGTCGAGCCACTGTCGTCGGCTTTGTTTTCTCTTTTTCT
TCTTCGGTTTTCTTTGTTTTTTATTTTGGGCGTTGTGCTGTCTGGCCCAA
CAGCGATATCGGTCGTGATTGCTATATTAATATAGCTGGGCGTATGCCTG
TTTCGAGAGAGAGGTGTAAACAGACATGCTGAATTTGGATCCTACTGTGC
TTTATTAATATCTCAGTTTATCCAACTTGTCACTCTGCTATTGTTTCTAA
CCAAGACCCACCTCATTTATAAGTGAGACTTTTCTAGCATATTTTGTTTT
ATTGACATATATATGCAATTATTTGTAACAAAAGCAGAGGGGCGAGAAGA
ATGGAAGGGTCTTAACTAGAATCTTGCATCAGCCATATTTGTAGGCTTGC
AATAACCATGAAACCCATAACCCAGTCGGTCAACCTATGGCATCTTGTAA
TCCTGTCATCCTTACCACACTACGTCCACATGTGATTTTTGATCTAAATG
AAATCAAAACGGAAACAAGTCTAGACTCTAGTTTTGTATGTCATTGCCTT
CCTTATATCAAGCCATGACCTTTTGCCCGGTTCACTAGTTATGTAGCTTC
AAAGTCTCTTTTGCTCACACGCTGATCGTCAGCGATCTTTTTAATATTTA
TGGTGCACACTGTAAATGAAGACTTTTTAGGCCATGTGATGATCAGCAAG
TATAATCTTAGTTTCTGATTAATAAAGAGGTGAAGAAAAAGTAGTCATGA
TGCCCTTGTATGGTTAGTATTGATGTCAGTGTTCTGATGCAACTGTCATT
GCTTACAACTTTAAAGCCGATGATCATAGAAACATGTTGGCCCTAGCTCA
AATATGTTCACATTGGCTGCGCAATCAAACTCACTGTCACAGGCATCGTT
CTCAATGTAACAATGGAAAAAATGAACTATTTGGTTGCGATATTGTTGTT
TTTCACTTGCACTTTGAATGCCCTTGAACTATTTTACTATTCGTGGGCCT
ACGCTCAGCACTCTTTTGAAAGGTGTTCCAATCCAATATCCTGTACTGAA
AAGTTGTAGCTCACTGGCTCCAGCTAACACATTGCTCACGTTCACCAACT
TGTTTTATCTTGCATTGGTCTCTTTTCTATTGTTGCACATGAACTGAACG
TCTTAATAATGATTCTTGTCTATTTCCAATTCGAGCTTCCACTCGCTACC
TCTTTGTTGATGATTATTTCAGACCCATCTGTTTCAGATAGGCCTGTGAT
CTTGCACCACTTTTATGAAACCGTTTCCATGGTATGTTCTAGCACATCCG
TACATGCTTGATGTCACCTCCTTGCATCTCTGCATGGCTGTGGATATTTT
TCTTTGTTTGAGCCCCAAACTTCAAATTCAGTCTTGTATGCATGTACTAG
AGAGCTACACCGCGCCCTCTTTCAATACGAAAATCATAGCAGAATCAAAT
GGATCAAGTAGGTTACTTAATTGGCACGTACTTTTATTTGTAAGTATTAG
TTCGTATTCTTATCTTATAATAGTGTTATATTGTTTACTATTTGCAATTT
GAATTTTAGCTCACTCTAGGTTACAGAGAGAAGTTCTTTGTCAAAGTATA
TGCTGCTGCATTCTATGTGGATTACTCCATTGGAGTTGATACTGAGAAAT
GGAGAGAAAAAGTTGGCATTGAGACTTTTGATGCTTCCACGGTTTTTAAC
TCCATTTTTGAAGGTAAGAGCGAAGCTCCAACTACCAAATGCCGAAGGAT
GAAATTGTAATGCATTCTGACAGAACAGTGTACTATGCAGCACCAGTTGT
GAAATCTCTGAGTATAACTCTTGTTAGAGATGTTGATGGCAAGACCTTTG
TGAAGGCTTTGGATGACATTATTGCTCGAAGAATAAAAAAACCAACTGTT
GAGGAAGAATCGTCATTGTCAACCTTCCGAAATATCTTTTTAGAGCGCAA
TCTGAAACAGGGAACAAGCATCTACTTAACTTGGTTGGAACCCTCAGTGA
TGCTGGTGAGTTAACAATCAATCCACTACTTCCAATATTTAGGATTCCAA
AAGAAACTATTATACTGCATAAATAAGTTCCCTACTAAGGCAATGTCAAC
TTCAGTATCTGCAGCAGTCATTAGTGTGGTAATGAGTTAATATCATTACT
ACAGACTAGACATAGCGAACGTTTGAAAATGTTATGTCTGGCAAGATATA
GTGGTACTGAAATCAGATTTATTTTACAGATGACAATAGATTTATCGCCC
TAAAAAGGAATGAAAGCCCACTCTCTTGCTATTATGTGGCAATGTCTTTG
CAGATGGCAACGATCCAAGCTGCCACCTCCTCAGTTTTTGCCATTAGACT
CAAAGATCCATCTGTTATTGAAAAATTTAGGATCTCGATGACTCCAAACT
TTCCATAGATGGTTCCAGACCATTGCGGTGGCCTCTGCCCGTAGTACTGA
TGTGAGTCCACTAGCAGTGCAAGGAGTTGATAGGTATTATTCTCCACGAG
GCTGGGTTAAGGATATCTGATCCATGTCCAACCCATAATGCAAAGGCTCC
TCCAAATTTGTTTGGAATGTCGGTAGGAAACAATAGACTTTTCTCCAGGC
ATAGCAATAAAACTCAAATCTATTTAGGTTTAACACTAGATTGAGTTACT
TTACTGTGAGTTGCATTTGGATCGTAAAGGATTTTAATTAATAGTACCCC
TCCGTCCCAAAATGTAAGGCATATAAGCATAGTCTAAAGTCAATATCTTC
TAAGTTTGACCAAGTTTTTTATTCACAAAAATATGAACATCTACAATATT
GAATCAATATCAATAGATTCACCATAAAGTATATTTTATCAATGTGTCCA
TTTAATATTGTAGATGTTCATATTTTTGTGTATAAACTTAGTCAAACGTA
GAAGATGTTGACTTTTGACTAACCTTATATGCCTTACATTTTGGGACGAG
GGAGTATCTACTTTGCAAATAGTCCTTAATCTGACATTTCTAAATCAGCT
TGTTTGAATTTGTTATGTAGCATATATGTTTTAATATGTGTTCTCTTTGT
TAGCCACAACCCATACCAAATGTTGGGTGCAGACATCTCTCAGCTCATTC
TTAGTGGACACACACACACATGAGCAAGGAGCACAGAGGAGAAAACAGGG
GAGAAACTTGCTTGAGCAACAAATGCTCTTTCACTGTTATATAGAAACAT
ATGCTACATCTCATACAAACTCAGCAATAAATGCCTTACTATCAACACAT
ACTTGACATGCAACAAATGCATTTTCACATCATGCTCATCAGCAACACAT
GCTGTGAGGCTACATCGTTACACACATGAGGAGTTACATCCTTCCACTAG
CTTACACATATGTATGACACACATACATATGTGCTTCAACCTGACACACA
TGCTTTCTACTGCCTCTTTGCTTGCAGATGGCTTCTCTCCATCTGGGGTG
GCTCTCCTTATATAGAGGCTTTAGGTCGGTGCCATAGTGACCATGTGCTA
CAGTAACCGACCTAGACAACTTATGCCTAGATGGCTTCTACTGCTGCTGC
TAACAAAACCAAATTTGGACTACTGCTGCTAGGTGTCATACAGCAAGCTT
ATGCCTTATAAGCTAAGTAAGGGCAAACCTACCTTCCCTACTATTCCCTA
GTAAAAACAACACAAGGATTGTAGCTAACACTCTTCTATTAAAAACAACA
ATAAACCTGCTATAAACTCGCATATGGGGAAATGCAAAGATTCTGTTAAT
GGAACAAGTGGCTTCAGTGTCTAAGAGCCTCTCTATAAATCATGTAGTTT
TCTCAAAAAACATGTTAGGGTTGTCGCTATGCTTCCCCTCCAACAGAGGA
AGGACCGCTTGCACATCGAAGGCACAATTTAACACAAGATCACAAGAGTC
GACGACACCTGAATTTGCACCTGAAAGACATGGGCCTAGTCCTGCGGTAC
CCGCAGGTCCTGAAAACTGAAATCGACCTGTTACATGGACATGCTCAGTA
CGCCGGTATTGACAAAGATGTTTCTAATCACCAAAATGCCCCTCCAAAGT
AGGAGAGAGAAGGGAAAGCTTGTAGGGGCATATATGGAATCGCAAACTAT
TCCTCATGCCCAAATATGTAGGGTGCAAATGTAAGTGATCTCTAGGGATA
AGAACACCCCAAATGGATATTCCATCTGCTATAAGAATATTTTTTCCTAG
ATGACCTAACTACCCCTTGGAGTTGTGAAGTAGGTAGAAGGCTCAATTGT
AACTTGCCTAGGGGCATGGCATTTAGTTTCTATGAACTTCTCCCTATAAA
TAGGGCCCAACCCTTCAAGAGGTGGCAAGGTGGCTTCACTTGGCAAATAC
TCTCACTTTGCCTTATAAGAAGAAGGAAAGGAGAGGAGAGAGGGCACTGC
CACTAGGGAAGGATGACCGCCATGTTGGGATGTCACCGTCGGGAAGGATC
ATGATGTCACTTGGAAGAGAGGTGGGACATCACCACTATGGGGAGGCACC
GCTGAGGAGTCTTCTTTGGGTCAGGAGGACTAGCCGTTGTTGAAGGAGCG
GAGCCATCAGAGGAAAGGAGCGGAACTATCCGAGTGAAGGAGCGGAGCCA
GAGCCAGAGCCGTGGAGCGTAGCAATTGGAACAACGCCTAACCTGTTGGA
ACCACATCGTGTTGACGACTCGACCCTATGTTTCTTTGGAACCTAGTCGT
GTAAACGACACATCCCTCGAAACCTCGACCATCGGATCGGGGCAAGGAAG
GATTAGTCGCAGACTCGTAGCATAACTTGTTCCAATTAGGAGGAACGTGA
AGCTATGCAGCGAAGGAGAGGAGCATTTGGTCCCCCACTGATGTACCGCC
CAGAGAAACCAACCTTCCAACCTACTCCCTCCGTTTCAAAATATAAGATG
CTTTAGGTTTGTGAAGAGAATGTATCTAGACTTATTTTAGTGTGTAGATT
CACTCCAAACATGAATGAACCTACATACTAAAAGAAGTCTAGATGCATTT
GCTTCACAAAGCTAAAACATCTTATATTTTGAAACGGAGGGAGTAGGATA
CACCAAATTTACTGATCGTGGTTACCTGACACAATTATGTTAATGACCTG
TAATTCCATGGTATATGTGGTGATAGGAAATAGCATTGTCGCCACTTGTG
GGCCATAACTTTGTCCATGGCGTACTTAAGAAGTAATATTCGAGAGTGTT
TTCCATTTTTGAAATGAAGTTATCAGGCACATATCAAGATTCAAGCATGC
AAATAAATTTTGATTGACCAATATTCATTGGAATAAAAAGGGAAATTATT
GATCCAAGTTTGTGAAAAAAGGGAAAGAAAACGTGAAGAAAATGATTACT
TGAAATTCATTCCTGGCGGTGCTAAATGATTTCTCATCCTGTTACTTCTG
CTTTTGTAGATATCGATTTCGACAAATCAAAGTGCATGTCAAGTTGACGC
TGAGATCAAATCATCTTCTGTTAATTATGCTCTATATGATGGCTTCTTTG
GTAGTTCCCCAGTATCCCCTACATTGAGATCTTCCACTGTTCAACTGCTG
GAAGCTATTTTTGCAAAGTGACACGCGAAGCAAGACTGTGCATGGCTCCT
GAAGACAAAGCACAGAGAATACTATAGTATCCCTCTGTTTCATAGTATTA
TAAGACGGTTTGCCAAAAGGTCCTATAATATGGAACGGAGAGTAGTTGTC
TTGGATATTTCATCCCATATTTTCAACCTGGCGGTGCATATCTGTGTTAC
TACTACACTCCTAGGATTTTGTTTCAGAATGTCTTGGGTAACTC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.