Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA020925

[Submit comment/correction]

Sequence	AA020925
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA020925
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CGCCGCAACGCAATACTCCAACACACCGCCTCCCTTTCTTCCCCCACGCG ACGCGACGGGACGGGACGCCACGCCACGACACTCTCTTTCCGTCCGCCAC CATTAGCCCTCTCTCCTCCGCCCCCACCCCGCGCCCCGCTCCCCCACGCA ACCCTAACCCTACCCCGCGCGCCCGCCTGCCCCCGCCACCAACTCCCATG GCGGACGAGCCGCCAGCGTCTCTCCCCCCCGCCGCCGCCGCCGCCGCCGT CGAGCCGCAGTCGGAAGAGCCGGTGGGGGAGGAAGAAGCGGATGAAGAAG CGGAGGAACAGGAGGAGGAGGCAGGGGAGGACGACGACGAAGACGACGAG GAGGAACCCGACGAGGAGGGGGACGCGCTGCTCGACCGCGCGCAGGCCTT GATCTCCAGGGTCGTTGAGCAGGAGGCCGACCCCAACCCGCGACTCATCC ACACCCTCGCCACCATCTGCGAGGCCCAGGAGGCCAGGTACGCGCCCCCC CTCCTGCTTCCACGCCCTGCTGCCCGCCTGGCTGACCGATTAGTTCATAC CTAGGGCTTGCTCTTGTTCTTGCCTCGCTGCCAGGAGCCACGCCACCCAC TACACCAGTTCCTGTAATAAATATTCTTATAGATGCTCTGTCCTAGGAAG AAGCTGCTATAATCACGCAAGGTGTACAAAGATGGAGTGGTCGACTCACT GACTGCAGTGGAGTGGCCGATAACAAAAAACTAAATAGCCTCTCGTGTGA GTTCACCGTGGAATGTTCCGGTTTCATCACTGGGGAATGTGCAATTTAAT AATAATCTATATGTATGTTCAAACTCCCTGCGGGTTCAATCACTTCGCCT ACCAAGGCGCCTGCTTGATTGAGATGTGTAGCTGCCAATGTTTCATGAAA CAAATTGCTTAGATACTCTGGTCATTTTCACATTTCTGCTGCTTGCGAGA TAGGAAGTTGCTGTATTTGCTCAAGGTATAACATACGGCATGGAGCTGCT GCCTCCACTTCCTAGCCAAGTTTAAGTGCACCCAATCTGACACTCTCAGT GCATTGGTCAATAAAAACAATTTTTCATCTCATATGCTTGCCAGTTGAGG TCAAGCCCGTAGTACACCCTGTTTCGGGGTCACTGTGTCTTTTGTTTGAT TTCATCACAGCATCATCTAAGCATCTTTCTGAAAAAACTTGGTTTCTAGG AAACCCTCTCTTTCTTGCTCTTGCCGCTGCTTCTTTTGTGTACCCAGGAC TAGGAAAACCGTTTCGAGGGAGAAGCAGAAGCTCTTCTTGACCCTTCACA CTCGGACTGAAATGCATGGCACCTGTATTTTGTTTGCGGACTAGGAAGCT GCTGTAATCGCGTTGTGGTCGACCATGTCACCTGTATTTTGTTTGATTTC ATTGAAACTGAAATGCATGGCATCATTTACACTTCTTAAAACTCGGTGGG AGTTGAATCACTTTGGTTCTACACTATGAAGGCTCCTTCTTGATTGAGAC GTACAGCTGATAATTCTTTTCTTTAATTTAATTGCTTCTAACGATTTTCT CTCTGCTTATCATATACTCCCTGCAGACATTTACAAGAGTGCGCAAGTGA TCCAACCTTTAACAACACAAACACGAGGGTCTCCCATACAATAGGCAAGC TGGCGAATTTGATCAGGGTGCGTGTTTTGGGTTTCTACGTGTATCGGTGT AGCCTGAGCCCTACCCATTTATTGGTGAAACTAACTGTTGCTACTTCAAC CGTGTGAGCAGGAGAACGATGATTTCTACGAGCTCGTGTTCTGCAAGTTC TTGTCGGACACATCATACCCTGTGGCAGTACGCTGTGCTTCTGCCAGGCT GCTCCTGAGCATCTATAACGCATGGGAGGTTAGTTACTGCCCCTCCCCCA CTCTCTCTCTCTCCACACACACACACACACACACTGGTTTACACTTTCAT CATACTCTCTTTAGTCTTCATTAGTTCTCTACGTTCTGTAATATTAACTT TATTCATGTTTGTCTCCGCAGTCCCAGTTTCCACATGCTTTTGAAGATGC TACCATCGCAAACCTAAAAAAATGGATAAGGGAAGATGCCGAAGCATGTG ATTGGAAGCATTTCGTGAGTGGTGAAAAGCCCACAGATACTGAGATGCTG AGAACATATGCTATTGGGTTGCTTTCGATGGCGTTGTATAGGTACTGTCA TGACTTATCAAATGAGATGCATTTTGTTTTCAGCAGCCTTTTTGATATTG TTAATCTAATTATTGCATTTTTTCTTTCTTTGCCAGTGGTGGGCAATTGG TAGAAGACATCTTGAATATTGGGGTATCAGCCAAGCTCATGCATTTTTTG CGAACACGAGTCTATGGGGATGGCACATCTTCACAGAAAGATGCTAATCT TCCATTAGATACCAAGCATCCTCGGGGTAGAGATGATAACAAGGGAAAAG TACGGTTTCTTCAAGATAGTTCTGTATCGGACGGAACAAGGGCTGGAGAT GGAATACCTACTGACCCAATTTTGGGAAAGGAGCTTGATCGTGGTGCTGT CATGAGGCAAGCAGCTGGAGATGACACTGTTGATATGCCCCAAGCAAATG GGCTAATGTCCTCAGCTGGTTCGGATGCAAAGTCAGTCAATGAGGACATG CATCCTGCATGTGAAAGCTTGAGAGATGACCTCTTGAAGAGAAAGCTGAG TCGTGCAGGATCTCGACTAAGAGGGAAAAGCAAAGCTGGTGAAAGCTTGC CTGAAAGTGAACAGACACCTTTATTACCAACCTCAGGATTGAGAGTGGGA AGTCGGGCCAGCAAAGACAAGAATGAGGATAAAGTCGAGGACCCAAAGAA AGCAATCGATTTGAACAATAGCTCTGCAGCCTTTGAGGCGGCTTATACTG TTATTTCCAAAGAAGAGTATGAAGACCGCTTCAGGGATTGCATTATTGGC TTGAAGGATATAACTGACATTGTTTTGAAGGCAGTTAGAGCTGCAGAAGC AGAAGCCAGGTCTGCAAATGCACCCGAGGAAGCTGTGAAAGCAGCAGGTG ATGCTGCTGCTGAGCTTGTGAAATCTGCTGCTTTAGAGGTATGGAAAAAG ACATATTTGGACTTTCCGAAATATAGTTACTTAACCCTGATTCAGTTTGC TGCTTCATTATTTGTTAGTAATTTTTGATGGTCTGTGTTTTATAAGGTTT GGAAGAGTGAAAATAATGGCGACGCGGTTGTATTAGCTGCTGAGAAAGCT GCAACTACTGTAGTGGATGCTGCCATGTCAACTAGTGTTTCACGGTAATG GAAGAAGCACACGCTCTCTCTCTTTCCTGTCTTTTCATTATATCGTTGTT CTTTCTCTGAGTTTTATTTGGTGTTACAGAAGCTCTGACCAAGTTAAGGA GGAGCATGTGGTTGAAGATGCTGTGAAAATCAGTCCGGACCAGGATTTGG AAGATTTTGTTCTTCCTGACCATGAGCAGCTCTTGCAACTTAGAGAAAAA TATAGCATTCTGTGCTTACAGATTTTGGGGGAGTATATTGAAGCTTTGGG TCCTGTTCTGCATGAAAAGGGTGTCGATGTTTGCCTGGCACTATTGCAAC GGGGCATCAAAGACCAGGAGGGATGTGGCCACGTTTCTCTACTTCATGAG ATCCTTAGATTAATTTGCGCCCTAGCCGCCCACCGGAAATTTGCTGCGCT ATTTGTTGATCGGGGTGGTATTCAGAAGATCCTCTCTGTCCCTAGGATTA CTCAGACATATACTGCTCTTTCTGCGTGTTTGTTTACTTTTGGCTCCCTC CAGGTAAACTTAGAAACCTAAATTGGCTGGTCATGCTGTGTTGCTGTCTG TCGATCTGTTGTCATTTTACCCTGGTCGTTCATTTATCTTATTTCTAAGC ATGTTTGATTTTTGCAGTCTACAATGGAGCGTGTTTGTGCGCTTTCATCT GACACACTCAACAATGTGGTTGAACTAGCTCTTCAACTCTTAGAATGCCC ACAAGATTCAGCTCGAAAGAATGCTGCCATATTCTTTGCTGCTGCTTTTG TGTTCAAAGCTGTTCTGGATTCATTTGATGCACAGGATGGGATGCAAAAA CTTCTGAATATTTTACATGTTGCTGCGTCTGTACGGTCTGGTAGCAACTC TGGAGCATTAGGATCATCTAATGCGAATCAAGGGAATGATCGATCACCTG CTGAAGTTCTGACTGCAACAGAAAAGCAGGTTGCATATCATTCATGTGTT GCTCTACGGCAATACTTTAGAGCTCATCTCCTCCAGCTTGTTGATTCCAT CCGGCCAAGCAAGAGTATCCGTAGTATTGCCAGGAATACTTCCAGTGCAA GAGCTGGTTACAAACCTTTTGACATCGGCAACGAGGCTATGGATGCTATT TTTCGTCAGATCCAGCGGGATAGAAAGTTAGGACCTGCTCTTGTGAGAGC TCGCTGGCCTGTGATGGATAAATTCTTGGCCTCGAATGGTCATATAATTA TGCTGGAGTTATGCCAGGTAAAAATCTCGTATTTTTTAAACCCTTTTTCT GGAAAAGCAAAGTTTGTATGTAAGCTGATTTAATTTCATAACAATCTGTT TCAGGGTCTTCCTGCTGATCGGTATCTTCATGACTTAGCTCAATATGCAT TTGGAATTCTTCATATCATAACACTGATGCCACACAGTCGCAAATTGATA GTGCATAATACACTAAGTAACAACCGTATTGGTATGACTGTCTTACTTGA TATAGCAAACAGTGTTGTTGGCTACGTTGATCCTGAGGTGTGTTTTTCCC TCTCAAGCTATGCATTAACTAAGCTTTACAAGTCCAACAGTATTTTCTTA AGTCCTTCCAATAATATATTGTTTTACTGTCCTTTGTGTATTAGGTGATA TGCCCGGCTCTGAATGTTCTTGTCAATCTTGTATGCCCCCCTCCTTCAAT CAGCAACAAACCATCCTCAACTGCCAATCAGCAACCTGGGAGTTATTCGG AAAGCAGAGACAGGACTGCTGAAAGACTTACTTTAGAAAGAAATCTAGCA GCAAACCAAGGTGAATCTGGCACACCTGTAGTGCCATCTGGAGTCGTTGG TGATAAGCGAATATCGCTAGGCGTAGGAGCTGGGGGTCCTGGTCTTGCTG CTCAATTGGAACAAGCGTATCGTCAAGCTCGAGAAGTAGTCAGAGCTAAT AATGGCATAAAGATTCTTTTACAGCTTCTTAGTACTCGGATGGTTACACC TCCCATGGCTATTGATCCTATTCGAGCCCTTGCCTGTCGGGTACTGCTTG GCTTGGCTAGAGACGATGCAATTGCTCATATACTGACAAAGCTCCAGGTA TCGTGGACTGCAGAACAATGCACTTATTTTCATATGTTTTGTCTTACTAT TGCATGACTAATCTCAGTAATGAGTAATTGGTAGCGACTATCCTCTGTTT CACCTATAGGGTCTGTTCCTTTCCCGTCTTGCCTCTTTTTGAAATACAAG TACTATACAGAAATCAGTAGTGTAGTTAATGAGGTTTTGTTACTTTACTA AGGTCGAACACACTACCTATTCAAACCTAGTTGAGGGACAGTTGGTTAAA CATCCGCCTCCCCATTTTTCTGGTACTTTGTGTGAAAAATGGTGTGAGAT GAAATTGATGGAGGGTAGTAGAGTTGGTGAACTGCCTGTCTCTGATCCTT CTTTCATCCTATCTTTACATGTGTACCTATGTAGCTTTGTTTTTTGCGGG TTTTGCGGGTTGCCTCCTAGTTAAGTAACTAACTATTATTAACCTGTTAT TTCAGGTAGGTAAGAAATTATCAGAACTGATTCGTGATACGAGTACCCAG ACATCTGGAAGTGATAATGCAAGATGGATAAATGAACTGACCCAAGTGGC AATTGAACTTATCGCGGTAAGGCACGACTATTGTTTTATGTTATTTTGAG TTGCTCAGAAGTTTATATCACGTGGAGTTTTTTTTGCTTGTATTCTTCTG TTTATCAAGTCGATGAGCGTGCTGTTTTTTTGTAGCTATTTAACATTCCA CAGTAACTAGGAATATTTTATAATCAGAACGGTGTTTAAAAGTTAAGAGT TGTGCTGATGTGGGAGAACAACTTGCAGTCCTTCAATGGTATCCAGTTAT GTTTGCTTCCATGTTTTATGTCATAGGCTTCCCTAATTTTAGGATTTTAA TTTATCCCTAATATGCGACGGTTTGGTTTTGCACTGCTTAAATGGGAAAG ATGGGCTGAATGACTAATATATTGTTTTTTTTTCTCCTGATAGGTCTTGA CAAATTCTGGTAAAGAAACAACCTTAGCAGCAACTGATGCTGCTGCTCCA GCATTGAAGCGCATAGAGCGAGCTGGCATAGCTGCTGCTACTCCTATCTC TTACAATTCCAGGTTTGACTTATTTGTAATGTTTTCCTTATATTATTTTC CCAGCTCCATGTTCCTACATCTGATCTTCTGTTTTGTGTGTAGGGAGCTG ATGCAGCTGATACATGAACATCTCCTTGGATCTGGTTTGGCTGCTACTGC TGCCATGTTGCAGAAGGAGGCTGACCTTGCACCTTCGCAAGTAACTGCTG CAGTGCTACCTGTCCACCGGGCTGTTGCCCCGGAACCATCATCTGTTCAA GTTCAACAACAGTGGCCCTCTGGCCGTGTTCAGGGATTTCTGTCTGAGAA AACAACGATAGCTGAAGATCAAGCTAGCCAGAGACCAGAGTCTGTTGTGC CTTCGTCTAAGAAGAAGGCACTGGTCTTCTCATCCAGTTTTTCTAAACGA GCTCAACCCTTTCTTTCATTTTCTGGTAATAAAGCAAGCAATAGCCTGAG AAGTCCTGTACCTACTGGAAATGTGGAAAGTATAACTTGGTCTGCTAATA CTGCCAATACTGGAGATGCGGAGACATCGCATAAAACACCAATGCCGTTG CCACTAAAGAGGAAGCTTGCGGATACGGACCTTAGTTCTGTGTCAGCAGC AAAGCGTCCTGCAATAGCTGATCAATCATGCCAATCTCCTGTATTCAAAA CTCCTGCTCCTACTCGCAGAGGCCTGTCTGTAGCAGTGGATTCTCCGACT GCGGCATTTCATCCAGGAAGGACAAACGAGAACTTTGAAGATTCTCAAGG CACGCCTGGTGTGCTGACAGGTACACCACATCTTGGTGCAAATGATCAGC AACCAGGAAATTTGGAGCGTATGACACTTGACTCATTGGTTGTACAGTAT CTGAAACATCAGCATCGCCAGTGTCCTGCTCCGATAACAACTTTGCCACC AGTCTCTCTTCTGCACCCTCATGCTTGTCCTGAGCCAAGCCGCAGCATTA GCGCGCCGCCAAATGTAACTGCCCGTATGGGAAGCCGTGAGATAAGCAGA GAGTTTAGTGGGATCCAAGTGCCCCGCAGGGATCGGCAATTTATATACAG CAGGTTCAAGCCATGCCGTGTCTGCCGTGATGAGTCCTCACTGTTGACTT GCATGACTTTTATTCAAGATGCATCACGATTGGCGGCGGGAAACCATACT GGCGAATTAAGAATATTCGACAGCAACACTGCGGGTCTCATAGAGACGCA GTCATGCCACCAGCATCTTGTTACAACGCTTGAGTCAACATCCTCTGGTG GAAATGAGCTGATTCTCTCGTCTAGCTTGAACGAGGTTAAGCTCTGGGAT TCTTTCTCGGTGTCTACAGGACCTTTGCACACATTCGAGGACTGCAAGGC TGCTAGGTTTAATCATGCTGGGACTTTATTTGCTGCCATTTCTACCGATG CAAATCGCCGGGCGATTCTATTGTACGATGTGCAGACACATAATGTTGAT ATGCAGCTTCCTGATAACTCGAGCCTGTCCGGTTCAGGTCGTAGTTACGT GCATCCAATTATACATTTCAGTCCTTCAGATGATATGTTGCTGTGGAACG GGGTTCTGTGGGATAGACGGAGTCCAGACCCTATCCATCAGTTTGACCAG TTCACAGACTATTGTGGTGGTGGCTTCCATCCAGCTGGAAATGAGGTAAC CTTTTTCGCTTGGGCTGTAGTTATTATATTCTCTTGTTTCAGTTCAGTTC TATCAATTTCATAGCATGACTAATTGGTCATGAAGAAACATTGCTCTCCC TGCTTCAAAATAAAATTTTCTTGCATTACCACAACCATTCCTTTTCCTTC TCAGCTAAGATGTTTGTGGCAGTTAGTAATGCGTAAACCATAATTATTCT CAATGGAAATTTTACGTCACTATACAGAAGAATTTATGTTTAGGAATATA TTTTGCATATGCTAGCTTCTCGGATTCTACACCTAACAAATTATAAAAGA CATAAGGCAAGCTAGTGTTGTGAGATCTTTATGAGTAAACTCGTCTTGCA TGCGCATGTCCAGTTTCTTAAAACAACAAAGTTGGCTGTTAAACAGGTTA ACCAGGCTGTTCAGCAACTGTGCCATTTATATTTGGCATTTATATTTTTT CTGAGTAGGCTTTATTTTATCTTTCCAGCCACATAGTTGACCTCAGTAGG CTTTCTCTAAGAAAATGCCTTAGTGAAGTGCAAGGTAGTAAGATACTTTT GCCAAATGGGTTTACATTTCACTGAAAAGTATTTAAATTGTGACATGCAC TGGAACAATGATCCATATGGGTACTTGCTTACACTGTAGTATTTTCCATG ACTGCCTATCATTCTTTGGTTACTTCGTTTTAAGTGATGCAAGTTCAGAA GTGTATGTTGTTGTGCTAGAATAAATGGATTTTATTTCCTGATGTTACTG TAAACCTTTCATTACTCTATAATCAATTCCTAGTCCATAATTCTCATTAA GCCACATCGCGATGAAAATTATAACCATTAGATTGTGCTTATCAATTCAA ATATTAACCCTTAGAACTTTATTACAAAAGGCAACATCAAGGAAGGCAGG AATGATATTTCTTACGCTTATCATTTTCATAGGGAGGAATTCATTTGTAT TGTGCTTATTTTCTCATCTCTGTCCACAATGTTTCGCCAGGTGATCCTAA ACTCGGAGGTGTGGGATCTGAGAAAATTTAAACTTCTGAGGAGTGTCCCA TCTCTTGACCAGACAGTGATCAAATTCAATGGCAGGGGTGATGTTATTTA TGCCATCCTGAGGCGCAATCTCGAGGATGTAACATCTTCCATCAATACTC GTAGGGTCAGACATCCTCTGTTCCCTGCATTCCGCACGATCGATGCTGTC ACCTACTCAGACATTGCAACTGTCCAAATAGACCGTGGTGTCCTTGATCT CGCCACCGAGCCCAACGATTCCCTTCTTGGAGTCGTTGCGATGGACAATC CCGACGAGATGTTCTCCTCTGCTCGCCTATTCGAGGTTGGCAGGAAACGA CCGACTGACGATGATTCAGATCCGGAGGACGGAGGGGACACGGAGGACGA GGATGACGATGACGACGACTCGGAGGTTGATGCTCTCCTTGGGTCTGATT TGGCGCTGGGGGACACGGACTCTGACGAGGATCCGAGCAACAGCAGCGGT GATGACGGTGGTGATGATGATGACGAGGATATGGACAGCGGGGATGAAAA CGATGAAGATGCGGAGTATGAGGAAGGTGACTTTGATGTGGGAGGTGGGC TGCTGGAGATCATGGGTGGCGGGGACGGTGATGAGAGTGATATGATTGAA TCCTTCAGCAGCGGCGATGAAGATGCCTGGATCATGTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.