Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA012920

[Submit comment/correction]

Sequence	AA012920
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA012920
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGGATGTTATTATTTCAGATCCCGGTCTTAGGATACCTATTAAGGATTT GGATCCTAACATACAAGATGTTGCTAGAAGGGAGTATGTTAATTTAGGTC CATGTCAGCCTTTTGGTCACAAATATAAGAGGTCTCCTTTTGGAAAAGCC GGTAGACTTAGAAGCTTTCATGATAATTGGTTCAAAAATCATGCCGATTG GTTAGAGTATAGTGTTGCTAAGGATGTTGCATTTTGTTTCTATTGCTTTC TTTTTAAGAAACCTAAAGCATACAACTTTGGCATTGAATCATTCACAAAG AAGGGTTTTAATAATTGGAAAGATGGACCTAGTGTTATTAATGTGCATGT TGGTGGACCGGATAGTGCTCACAATAAATCTAGACAATGTTATGTGGCTT TAAAAAATCAAAGGCAATCAGTGACACATGCGATGGAGCGTGGCACCATA AAGGATCAACAACAATACAAAGCTCATCTTATCATTATTTTAGGTGTTGT CAGATTTATTTTGTTGCAAGCACTTGCTTTTCGTGGTCATGCTGTCCGAG CTCAAAGAATAAGGGGAACTTTTTGGAGATGATGAGTGATGGGTTTCGCA GCATAGTAAATCAAATATTTTCTACGGATGCGAATGGGAAAGCCAAGATC TAATCTAGGAGATGCAAACAACGAGGGGGGATAAATGAGATCTTCATACC CTTGAAGATTCGCACAGCGGAACGTTCAACGGAACGTGGTTGATGTAGTC GTCCTAGCGTCTCCTCCTCGCGATCCGATCCGATCCGATCCAACACCGCA AGTGGCGATGCCTCCGAGAGATGCACACATACGGCACCTCGAAGTCTCCT CCTTCCTCGGTCCAGCAAGTGGGGTGGAGAGATAGATTGTATATACAACA CGACGGCGTGGTGCAAAGGTGGAGAGTTTCTGCGGCAGGGCTTCGCCTAC GCGCAGTCGGGAGAGAGAGAGAGAGAGGAGGGCAGCAGGTAGGCGGCTAG GGTTGAGGAGGTGTGGGGGGAGGGTGCGCCCCTGCCCTCTTTATATAGAG GGATGGCCGGCTGCCCCCTTGCCCCTCCTCCAAGCCTAGGGCCGGCGGCC ACATGGGAGGAGTGGGGGGCAAGTTTCCCCCCTTTCTAGAAGCTCTCCCT AGGGCTTGGCCGGCTGGGCCTATGGGGCCTTGTGCCCCTGGTCCAATGCG GCCAGGGCACTCCCTCGTAGGCCCACGCCCCCTCCCGACAAGTGGGGCCA CGTTGGTCCCACTCCGGAAGGTTCTAGAAGCTTCCGGTACAATACCGAAC AATCCGAAACAATTCCGAAATCTAAAAACTGCTTTCCCTTATATGAATCT TATTCTCCGGAACCTCTCGTGATGTCCTGGATCTCATCCGAGACTCCGAA CAAAAACTCATAAACCAATTATCCATTCTATCCTAGCGTCGAGACACGTT AAGTGTGTGACCCTACGGGTTCGAGAATATGCAGACACGATCTTCTATCA ATAATCAACAGCGGGGTCTGGAAACCCATATTGACTCCCACACATTCATC AATGATCATATCGGATGAACCACGATGCCAGGATTCAATTAATCCCATAT ATATATATTCCCTTCGTCACGCGATATTTTACTTGCCCGAGATTCGATCG TCGGTATCGGCATACCTAGTTCAATCTCGTTCATAGCAAGTACTTTACTC GTTCCGTAATCCGATATCACTTTGTGATTAACTCCTTAACCACATGCTTG CAAGCGGTGTTGATATCGATTACCGAGTGGGCCCAAAGTATATCTCTCCG ACTTGGGAGGGACAAATCCCATCTCGATACATACAACCCAACAAGTACTT TCCGATCACCTGAGAGACACCTTTATGATCACCCTCTCATAGGATGACAT TTGATGACCTCAAATATTTCTTCCGATACCAGGGAGTTGCATTATCTCAT GGTCCAAGGAATACAATATTTGACATAAGAAAAAGCTTCGCAAAGATGAA CACGATGACACGATCTAATTGCTCTGCTTGATTTGGGTATGTCCATCATA TCATTCTCCCAATGATATGATCTCATTATTAATCGACAACTCATTTCTAT GGTTAGGAAACCTTAACCATCATTAATCAATGAGCTAGTCCATAGAGGCG TACTAGGGACACGGCGTTGTTCATAAACCACACAAGTATCAAAGTTTCCG CTTAATACAATTCTAGCATGGAATATAAACGTTATCATGAACAAGAATTA TAATAACAACATCTTTATTATTGCCTCTAGGGCATAATTCCAACAGTATC CCACTTGCACTAGAGTCAATAATCTAGTTTACATCTGGCAACAATCTAAT ACCCATGGCACTATGGTGCTGATCATGTTTTGCTCGTGGAAGAGGTTTAG TCAACGGATCCACGACATTTAGATCCGTATGTACTTTGCTAATCTTCAGA TCTCCATCTGTTATATAATCTCGAATTATATGAAACTTGCGGTTGATATG CTTGGTCTTTGGATGAAATATTGGTTCCTTAGCCAGTGCTATGGCGCCAG TGTTGTCACACAATATCTCCAGTGGGTACAAGGCACTTGGAACCACACCA AGCTCAGTGATGAAGTTCCTGATCCAAACTCCTTCACTTGACGCATCTGC AACAACCATGTATTCCGCTTCTACTATAGATCCCGCGATCACGCTTTTCT TGCAGCTTCTCCAGCTCACAGCTCCTCCATTCAAAATATAAATGTATCCT GTCTGAGATTTAGAATCATCCTTGTCGGTGTCAAAACTAGCATCGACGTA ACCTTTTACGACGAGATGTTCATCACCTCCATAGACTAAAAAATTTTCTT TAGTTCTATTTAAATACTTTAGGATGTTCTTCACGGCTGTCCAGTGTTCC ACTCCTGGATCACTTTGGTATCTGCTCGTCAAACTAAGAGCTTTGGACAC ATCCGGTCTAGTACATAGCATGGCATACATGATAGATCCTATGGCCGAGG CATAAGGCACTTTGCTCATAGCTTCTCTATCGTTTACCGTAGCTGGACAC TGAGCCCTGCTCAATATCTTACCTGACAACATAGGCACTGAACCTTTCTT TGCCTTATCCATTCTGAACCTTTTCAGAACTTTGTCTAGGTATGTACTTT GGCTTAAAGCTATCAGGCGTCTTTGTCTATCTCTATAGATTTTGATGCCC AATATATAAGCAGCTTCCCCTAGGTCTTTCATTGAATTTTTTTGTTCAAA TAACTCTTCACATCGTTAAGCATGTCAATGTCATTTCCAATAATCAATAT GTCATCCACATATAGTACCAAAAATGTCACTAAGCTCCCACTCACTTTCT TGTAGATACAAGCTTCATAGCAATTTGGAACAAATCCAAAGCTCTTGATC ACTTGATCAAAACGAAGGTTCCAACTCCGAGATGCTTGCTTCAGTCCATA AATGGAACGCTGAAGTTTGCACACCTTATCAGCATCCTTAGGATCGACAA AACCTTCGGGTTGCATCATATACAACTCTTCATCAATGTTGCCATTGAGG AACGTAGTCTTGACATCCATATGCCATATTTCATAATCATGAAACGCAGC AATTGCTAATAAAATCCGAATGGACTTAAACATCGCTACGGGAGAGAAAG TCTCATCGTAGTCAACACCTTGAACTTGTCGAAAACCTTTCGCGACAAGC CGTGCTTTATAGACAGTAACATTACCATCCGCGTCCGTTTTCTTCTTGAA AATCCATTTGCACTCAACAGCCTTTCGGTCGCTAGGAGGGTCCACCAAAG TCCATACTTGGTTTTCGCTCATGGATCCCAATTCGGATTTCATGGCCTCT AGCCATTTCTCAGAGTCTGGGCTCATCATTGCTTCCTCATAGTTCGCAGG TTCACTGTTGTCTACTAACAAGCTAGTTAAGACAGGGTTGCCGTACCACT TAGGAGGGGCACGCGACCTTGTCGACCTGCGATGTTCAGTAGTAGCATCG TCCGAAGCTTCATGATCCTTGTCATTAGCTTCCTCTATTGTTGGTGCAGA CGGCACCGGAACAATTTCAGGTGCTGCGCTACTCTCCAACTCAAGAGAAG GTTCAATAACCTCGTCTAGCTCTACTTTCCTCCCACTCACTTCTTTCGAG AGAAACTCCTTCTCAAGAAAGGATCCGTTCTTTGCGACAAACACTTTGCC TTCGGATCTGTGGTAGAAGCTATACCCAATCGTTTCCTTAGGGTATCCTA TGAAGACGCATTTCTCCGCTTTGGGTTCGAGCTTGTCTAGCATTAACTTC TTGACATAAGCTTCGCATCCCCAAACTTTAAGAAACGACAACTTAGGTTT AGCACCAAACCATAGTTCATACGGTGTCGTGTCAACGGATTTAGATGGTG CCCTATTTAAAGTGAATGCAGCGGTTTCTAATGCATAACCCCAAAATGAT AATGGCAAATCTGTAAGAGACATCATCGATTGCACCATATCCAATAAAGT TCAATTCCGGCGTTCAGACACACCATTGCGTTGTGGTGTTCCGGGTGGCG TGAGTTGCGAAACGATTCCGCTTGCTTTAAGATGCGTGAGAAAATCATAA CTCAAATATTCACCTCCACGATCGGATCGTAGAAATTTAATTTTCCTGTT ACGATGGTTTTCCACTTCGTTCTGAAATTCTTTGAACTTTTCAAATGTTT CAGATTTATGTTTCATTAAATAGATATACCCATATCTACTTAAGTCATCA GTAAAAGTGAGAAAATAGCGATAACCACCGCGTATCGAAACACTCATTGG TTCGCATACATCGGTATGTATGATTTCCAACAAGTCCGTTGCTCGCTCCA TTATTCCGGAGAACGGGGTTTTGATCATCTTGCCCATGAGGCATGGCTCG CACGTGTCAAATGATTCAAAATCAAGAGACTCCAAAAGTCCATCAGAATG GAGTTTCTTCATGCGTTTTACACCAATATGACATAGACGGCAGTGCCACA AATAAGTCGTATTATCACTATCTACCTTGCATCTCTTAGCCTCAATGTTA TGGATGTGTGTTTCATTGCTTTCGAGATTCAGAAGAAATAAACCATTCAT AGCAGGTGCATGACCATAAAAGATGTTACTCATATAAATAGAACAACCAT TATTCTCCGATTTAAATGAATAACCGTCTTGCAATAAACACGATCCAGAT ATGATGTTCATGCTCAACGCAGGCACATAATACCATTTATTGAGGTTTAA AACTAATCCCGAAGGTAAAACTAAGGAGAGCGTGCCGACGTCCATCACAT CAACTCTTGATCCGTTGCCAACGCACATCGTCACCTCATCCCTCGCTAGC CGCCATCTATTCCGGAGCTCCTGTTTCGAGTTACAAATATTAGCAACTGA ACCAGTATCAAATACCCAGGGACTACAATGAGGGCTAGTAAGGAAAACAT CAATAACATGTATATCAAATATACCTTTGATGGTGCCATCCTTCTTGTCC GCTAAGTACTTCGGACAGTTGCGCTTCCAGTGACCCTTGTCCTTGCAATA GAAGCACTCAGTGTCTGGCTTAGGTCTAGACTTGAGCTTCTTCTATGCAG GGGCAACGCGCTTGCCGCTGCCCTTCTTGAAGGGATTCTTTGCACCCTTA CCTTTCTTAAAGCTGGGGGGCTTGTTGACCATCAACACATGATTATCTTT CTTGATGTCCACCTCCGCAGCTTTCAGCTTAGCGAAGAGCTCAGTGATCG TATTAGTGGAACCAATCTGATTATGAGTAACTACAAAACCTTTGTATCTA GGAGGGAGTGATTGCAGAACTCTGTCAATCTTGAGCTCCTCTGGAATCTT GCAGTCCAGTTGCTCAAGGCGTTGAGTGTAGCCCGACATCTTAATGGTGT GCTCACTAACGGAACTCCCTTCCTCCATCTTGCAGTTAAAGAATTTCTCA GAGATCTCATATCTCTCAGAACGGGCCTGAGTCTGAAACATAGTTTTCAG TTCCTCAAGAATCTCAAAGGGCCCGGGGAACTCCTCAAAACGATTTTGAA GGTCCGATTCCATAGCAAACAACATGGTGCTCTTAATCACACCATAATCA TCCTTGCGCGACTGATAAACAGCTTTCTCATTAGCCGGCACATCTACAGC AGGGGCGTCACCTAGCGCTTTCTCAAGGACATAGTCCTTTTGTCCGCCAG AGAGAATGATTCTCAGATTGCGGAACCAGTTGGTGAAGTTAGACCCATTG TTCTTAAGATTTTCTTTCTCAGCAAAAATGTTGAAGTTGAAGTTGGACTT AGCCATTTGATCTACAAAATTTGCAAGTACAATTTAGACTATGTTCATGA TAACTAGTTCAACTTAATCAAATTACTAGATGAACTCCCACTAAATTCAA CATCCCTCAAGTTGTTCAGTGAACATGATCCAAATTCACCACACCTAATC CGATCTTCACGAGAAGAGATGTGGTTTCAATGGTGGACAACAAAGTGTCG ATCATATCATTCATATGACTCATGCTTAACCTTTCGGTTCGAGTGTTCCG AGTCCATGTCTGTACATGCTAGGCTCGTCAAGTCAAACCCAAGTATTTCC GCGTGTGCAAAACTGGCTTGCGCCCATTGTATGTGAACGTAGAGTTTATA GCACCCGATCATCACGTGATGCTTGAACACGACGAACTTTCGCAACGGTG CATACATGGGGAGAACACAGTTTTATCTTGATCTTTAAGTGAGGAATCAT CTTATAATGCTACCGTCGCGATCTAAGCATAATAAGATACATAAAAGGAT AAACATCACATGCATATAATTTTATGTGACATGGTATAGCCAATCTCCGC GCAATGATCTCCATCTTGTGCGTGCCAGCATGATCTCCATCACTCCACCA TGATTGCCTCCACCACGAATAGCAACTACAACTATTGCTAACTACTTAGC GATAAAGTAAAGCTATTACATGTCGTATAAGAATTTGACGCACAGGTCAT ACACAATTATAAATACAACCATATGTCTCCTGCCGGTTGTGTACTCATCG ACATGCAAGTCGTGAAATATTACAAAACATGATCATTGCATACAACATAC ACATCACATCTTGGGCCATACCATATCACAGAAACACTCCCTGCAAAAAC AAGTTAGACGCCTCTACTTTGTTGTTGCATGTTTTACGTGGCTTATGGGA GTAACAAGCTAAGAACGATCTTACCTACGGAAAGCCACAATGGTGATATT ATGGTTGCGAACATCCGGTGTAAATCCCATGACAACTATAGTGAGAGAAA CTGGCATCCACCAGCCGCATGTGTGGAACAAGCCACACGTCAAGTGCGGA GCCGGTCTCGCGAACGAGGTCGCGTAAATTTGGCCTGGACTGCTTCGATC TCACTATCCCGCGTCATAAGAAGTACACAAAAAAGAGGCTTGCAACAGAA AACATCAACGCCTGCAACAAGCATGTTGCGTTCTACTCGTGAAACACATC TATGCATAGATCTAGCTCTGATACCACTGATGGGTTTCGCAGCATAGTAA ATCAAAAAATTCTACGGATGCGAACAGGAAAGCCAAGATCTAATCTAGGA GATGCAAACAACGAGGGGGATAGATGAGATCTTCATACCCTTGAAGATTC GCACAGCGGAACTTTCAAAGGAACATGGTTGATGTAGTCGTACTAGCGTC TCCTCCTTGTGATCCGATCCGATCCAACACCGCAAGTGGCGATGCCTCCG AGAGATGCACACGTACGGCACCTCGACGTCTCCTCCTTCCTCGGTCCAGC AAGTGGGGTGGGGAGATAGATTGGATCTACAACATGACGGCGTGGTTCAA AGGTGGAGAGTTTCTGCGGCAGGGCTTCGCCTACGCGCGGTCGGGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGGAGGGCAGCAGGTAGGTGGCTAGGGTTGAGGAGGTGTGG GGGGAGGGTGCGCCCCTGCCCTGTTTATATAGAGGGCTGACCGGCTGCCC CCTTGCCCCTCCTCCAAGCCTAGGGCCGGCGACCACATGGGAGGAGTGGG GGCAAGTCCCCCCTTTCTAGAAGCTCTCCCTAGGGTTTCCCCTAGAGCTT AGCCGGCTGGACCTATGGGGCCTTGTGCCCCTAGCCCAATGCGGCCAGGG CACTCCCTCGTAGGCCCACGCCCCCTCCTGACAAGTGGGGCCACGTTGGT CCCACTCCAGAAGGTTCTAGAAGCTTCCGGTATAATACCGAACAATCCGA AACAATTCCGGAATCCAAAAACTGCTTTCCCTTATATGAATCTTATTCTC CGGACCATTCCGGAACCTCTCGTGATGTCCTGGATCTCATCCGAGACTCC GAACAAAAACTCATAAACCAATTATCCATTCTATCCTAGCGTCGAGACAC GTTAAGTGTGTGACCCTACGGGTTCGAGAATATGCAGACATGATCTTCTA TCAATAATCAACAACGGGGTCTGGAAACCCATATTGACTCCCACACATTC ATCAATGATCATATCGGATGAACCACGATGCCAGGATTTAATTAATCCCA TATATATATATTCCCTTCGTCACGCGATATTTTACTTGCCCGAGATTCGA TCGTCGGTATCGGCATACCTAGTTCAATCTCGTTCATAGCAAGTACTTTA CTCGTTCCGTAATCCGATATCACTTTGTGATTAACTCCTTAACCACATGC TTGCAAGCGGTGTTGATATCGATTACCGAGTGGGCTCGAAGTATATCTCT CCGACTTGGGAGGGACAAATCCCATCTCGATACATACAACCCAACAAGTA CTTTCCGATCACCTGAGAGACACCTTTATGATCACCCTCTCATAGGATGA CATTTGATGACCTCAAATATTTCTTCCGATACCAGGGAGTTGCATTATCT CATGGTCCAAGGAATACAATATTTGACATAAGAAAAAGCTTCGCAAAGAT GAACACGATGACACGATCTAATTGCTCTGCTTGATTTGGGTATGTCCATC ATATCATTCTCCCAATGATATGATCTCATTATTAATCGACAACTCATGTC TATGGTTAGGAAACCTTAACCATCATTAATCAATGAGCTAGTCCATAGAG GCGTACTAGGGACATGGCGTTGTTCATAAACCACACAAGTATCAAAGTTT CCGCTTAATATAATTCTAGCATGGAATATAAACTTTATCATGAATAAGAA TTATAATAATAACATCTTTATTATTGCCTCTAGGGCATAATTCCAACAAT GAGTTGGTACAAGAAAAAAGATCCAAATGCTAGGGCTTTGATTGATAGTG CCGGTGGGAATCATTTGATGATTTCTCATGAGATACAATTGGACTTGTGC CAGGCTTGTGCAGAAGAGACCACTCGATCCATTCTCACTGATATTGGAGA TAGGAATTTTTCTTTACTTGTTGATGAGTCTAGAGATGTATCTATAAAAG AGCAAATGGCTATGGTTTTGAGGTTAGCATCTTGTTTATTGTTTTATTAT TTACATGTTATTACTTAATTGTTTATTTACTTATGATTCTTTGTATTATA TAGGTATGTTGACAAACAAGGGTATGTGATTGAGAGATTTATTGGGATTA GGCATGTTCCTGATACGAGAGCTGCTTCACTAAAGCAAGCTTTGGATGGT ATGTTTCTTCACTATGGCCTATCTATGTCTAGGTTGAGAGGGCAAGGGTA TGATGGAGCTTCTAACATGAGAGGGCAATTTTGTGGCTTGCGAAGGTTGA TACTAGATGAAAATCCATATGCATTTTACATTCATTGCTTTGCCCATCAG TTGCAGTTAGTGGTTGTTGCTGTTTCCAAGTGTTGTTCCTCCATATTGGA TTTCTTTAACAATGTCACTTTGATTGTCAACACTGTTAATGCTTCTTGTA AAAGACATGATGAAGTAGCACAACATGAACATGACACTATGGTCAGCCAA TTGGAGTCTGGGGAAATTTTTTCAGGAAGAGGAAAAAACCAAGCAACAAA CCTTGTAAAACCTGGGGATACACGGTGGGGCACACACCATAAAACTTTGT GTAGATTCATTATGATGTGGAAATCTGTTCTTCATGTATTGGAGAATGTT CATGATGATGGAGAAAGTCTTACACAAAGAACCACCGCGGGTGGCTTGAT TTCTCAGATGGAGAGTTTTGAATTTGTTCTCTTATTGCATCTTATGATCA AACTATTGGGCAAAACTAATGAGTTGTCACATTGTATGCAAAGTAAAAAT AAAAACATTGTTCGTGTTGTGAGTTTGATTGGCGTAACATTGGACAAGAT TCAAGGTATTAGAGATAATGGTTGGGATGAACTCATGAAAGAGACATCCG ATTTTTGTATCAAATATAACATTGTGGTACCAAACATGGATGATACAATA CCTGCTCGAGGTCGCTCAAGTGGTCGTGGATGCACAATGGTAACTTACTA TCACCGCTTTAGATATGAGATATTTAATATTGTGCATGACCAAGTTCTTG TTGAGTTGAATAACCGCTTTGCTGAAAAGTCTACTCAATTGTTGAGGTGC ATTGCTTGTCTTGATCCAAAGAACTCATTTGCTAATTTTGATGAAGACAA ACTTGTTGAACTCGCTCAGATGTATGCTGAAGACTTCTCCATATATGAGA TTTCTTTTGTCCTTAGAAATCAACTTGAGACATTCATTGCTGATGTGAGA GGTGATTCGGATTTTCTGAATTGTCATGACCTTGGTAATCTTGCCGTGAA AATGGTTCAGACTGATAGACACACAGTTTTTCCTTTGGTATATCGCCTCA TTGAGTTGGCATTGATTCTACTGGTTGCAACAACATCAGTGGAGAGATCT TTCTCAGCTATGAACATTATCAAGACCGAGTTGAGAAATAAAATGGGTGA TGATTGGATGAATTATAGCATGGTGTGCTATATTGAGCGAGATGTATTTC ACTCTATCAATGATGATGATATT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.