Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA000197

[Submit comment/correction]

Sequence	AA000197
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA000197
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	GTTTCACGACACAGCCTCCTTAAATAGCGGTGCATCGCCTGCTTCCATCC TCACACCAAAACCTAGCTAGCTCCACACCAATAGCTACAACCGTACACTC AGCTCCTCACTGCCATGGCGAAGAGTACTTTTCTTGCATGTGTCCTCGGT CTCCTTGCACTGTGCTTCTCCTCGTCGGCGGCAGGAGCCAGGCCGGCGGC GCCTAACGGCGAGAACCGTCAGCCGTTGGTGAACACGGTGTACGTGTTCG GTGACTCACTCGTCGATGTGGGCAACAACAACTACTTGCCGCCGCCGGCA CCCAGGGCGAACAGTCCCTATGGCATGGACCTCCCCGGCAGGCCCACCGG ACGCTTCACCAATGGTTACAACCTCGCCGACATCATCTGTAAGCTCCGCT AGTAAATAATTAATTTCAAACTAAGTCGCAGGCACCTAACTAGCTATATG TTGTGCACCGTACATGCATGCTAAGGATGCATGAACGGAAATTGCCATAC CACTGATGAGAATAACATTGTGGAATGGATAAGTTTACCCATGCATACTC ATGATTATTAAGTAGCTAGGTAAATAAATCCACCTCTCATGTATGTCTCG CAAATTTCAACTATTGCAGCACAACGTCTCGGGTTCGAGACTAGCCCCAA AGCTTACCTCTCCATGTGGCCGCTCGACAAAATTCTACTCCGGTCCTGCC AGATCGGTGCCAACTATGCCTCAGGTGGATCTGGTATCCTCGACACCACG GTAATTATTATATGCACTCACAAAATTATTCAAGCTCTTGAAATGCAAAT AATAAATCATAAGATAATTGTTTTGAAACGTAACATTATTACAAAATGAA AAACCATTTGATGACGATTTCATGAAGATATTGTGGATACATCGTAGGGA GAAGGGACGTTGACTATGCGGACGCAGATAAAGTATTTCAAGAGGGCGGT AGACCAGATGTTTTGTTTCCCGAGTAAGGAGGACCACCTGGCAAACTCGC TATTCCTTCTGAGTGGCGGAGGAAACGACTTCTCGGCCTTCAGTTCGTCC ACTGACAGCGCCCCTGTCTACATTGCCAAAATGGTCTCCACCTACATCGA GCACATTCAGGTACATATCATGGTTGTGGCGTCATTGCTGATAGTTTTGT TTATTAAAAACACAAATCAACTGTTAACTATGTAAAACTGTATATGTGGA CGGCAGGCATTGTACAATCTTGGGGCACGGATGGTGGGGATCCTAGATGT GCCGCCGGTCGGGTGCACCCCGGGGTCAAGGCTCGACACGTCGAACGGCG GGTGCTACGACGTTGCCAACTCCCTGGCTCAGGGGTTCAACAACCTCCTC AGGACACAGCTCGCCGACGCCGTGACAACCAACATGAAGGACCTCAAGTA CTCCATCGCCAGCAACTACAACATCCTCACCAACATGATAGCCAACCCGT TCATTGCTGGTATGTATACCTATCACTAATATTACCGGTAACACGATGTC TGAAACGGATCTGCCGCATACTATGGGGCGGAAAACATAACAATTGACAT TGCTACATCACCTGCCACTTGTGCATGAACATATCTCACTTTAATGTATG AATAGGATTCAAGGAGGTGGAGACGGCGTGTTGTGGTGTTGGGAGGTTTA GGGCGGAAGAGATGTGCAGCCATGGCAACACGACGGCATGCACTGGCAAC CACAACGACTACATGTTCTGGGACAAGCTTCATGGGACGCAGGCCACCTA CGAGCATGGTGTCGTGGCCTTCTTCTACGGCAATGGTCCCGAGTATGCCG ATCCCATCAACTTCAGCACCTTGGTCAGGAAGAAAGGAGCGGTCGCACCG AAGATTGAGCTGGTCACCGACGAGTAATGAAATGACATCCATTGATTGCA TGTATGCACGTTAAGTTGCACGCATGCATACATGTGTTGTCCACTTGGAA ACAAATAATGGCAGCTTATTAGCTGGCTGCTAATTCCCATTTTGTATCGA GCTTATATTGCTGATACATGACGATTTACATTCACGATTAGTTCCTTGCA GCTTGATGGTCTTGTACTATATTTATGTCTGTCCTATGCTATGTCATTAT GTGGAATAAAATGGATAGCGCTTGTGTGCTTAACCAATTCTTCTCGTGGT GGCGGATTGTTTTGGCGGTCTTGTGTGCATGCTTTTTGGAAATAACTTTT TTTTTTGAAATAGGCGTTTTATTACTTCAATAATGTTTACACCCGGCCTC TGCATAACTGAGATACACACAGGCGATCACTTACATAACTTGCAACCATA GCAAAAATATTAAAACTATAAAGACTTGTAGATAGTAAAAGGGCCTCTAG CTATGACATGTCTATTCGCAGATCACGTTGCCATTCATGTCGGGAGAAAA TATCCCTCGCCGTGTTCTCTAATCGTGTACACCCCTGTACAAATAAGTCG CGGAACTTCATACGTTGGAGAGTAGTCCTGAAATACACATGACAATATCT CGTAGAGTTATCGATCAAAGTCATGAAATATTTCTTTCCACCTTTTGTCA ACACACCATTCATCTCACAAAGATCAGAATGTATGAGCTCTAGTGGTATT AAATTTCTCACTTCTGCAGTCGTATGTGACTTATGAGGCTGTTTAGCTTG CACGCAGACTTGGCACTTAGATCCCTTAACAGTTGTGAAATCAGGGATTA AATTTATTTTGGCTAGCCGCGTCATACAACCAAAATTAATATGACAAAGA CGAGAGTGCTAGACATTTGATTCAAAATTCGTGTAAATATGATTAACAAC TTTATTACAAATGTTTGACAGAGATAAGCGAAACAAGTCTCCGCACTCAT AGCCTTTACCAACAAAGATTCCATACTTTGAAATTACAAATTTATTGGAC TCGAATACAATCTTGTAGCCATCTCGACACAGAAGAGATCCGCTAACAAG ATTTTTATTTATTGAGGGAACATGATGCACGTTCTTCAGGCGCACGGTCT TTTCCGAAGTAAACTTCAGATCGACCATACCAACACCATGAACAGAAGCA TGCGAGCTGTTCCCCATCAGCACGGTTTGAGTCCCTTTGACCTGATATGA AGAAAACATGGAAATATCAGAACATACATGTACATTAGCGCCCGTGTCAA TCCACCAATCAGGAGAATGACATAATGAAAAAACAGTAGGTAATATACCA TATCCAACATCTTTCATCTCAACGTCGCCCATGACAAAATTAGCAGTCTT GCTGCCCTTTCCATGTTGGCGCTTGTCAAAGCGGTTGGGACAAGCAGGAG CCCAATGATCAGGATCACCGCACACATGACAAGCACCTTTCCTCTTATCA GTCTTCTTCTTAAAGCTGGTAGACTGTGAGGTCTTGTTCTTTTCATCGAA CTTTCCTTTGCCGTCAAACTTGCCTTTGTTCTTGAACTTATGAGACTGGA AGTCCCTTTTCTGTACCAGATTGGCATTAGAACCTCCCTCGGTACCTCAA GCACATGTGTCTTTTGCTCTCGCCTTATCTTCCACATCAAGAGTCTCAAT GAGATCTGTCATGGAGAACTCTTGTCTCTTGTGCTTCAGAGAAGTAGCAA AATTCCTCCATGACTGAGGAAGTTTGGCAATAATGCCTCCGGCAACAAAC TTGTCCGGTAACACACAAGTGAAGTGCTCAAGCTCCCTGGCAAGTGACTG TATCTCATGAGCCTGCTCCACAATGGGGTGGTCATCAACCATCTTATAGT CATGGAATTGTTCCATGACATACAGTTCACTGCCAGCATCGGAGACTCCA AATTTTCTCTCGAGCGCATCCCACATATCCTTGCCATTGCTAAATGACAG ATATGAATCGACAATATTGTCGCCAAGGATGCTGATCAAGGCAGCCTTGA AAATGATATTAAGTTTTTGGAACGCCTCTTCCTGAGCGGGATTAAGTTCT CCCTCAGGTGCGCCATAGATGGCGTTATAGCAGCTCATGGTCTCAAACCA GAGCACTGCTCTCGCACGCCATCGTTTGTAATTCACACATTCGAACACAG GTGGCTTCATAGAAGCAACAAAGCCACTTGGGACAAATTGCCTGAAATAA GGTTTTTGGATTGTTGAATAAAAGAGCAATTTACCAAGAAAATTATCCAT AATAAACGCTAGATAAAACATGATTAGAATAATAGGCAATATACTAATCA TGTGAAATAGCGAATACATATTAAGACATATAACTAAACAAACTGCAAGG CGTAAAACTTTAGATACGATCAGAATAAGATTGAGAAAGAAGATATACAC GGCAGTAGCAGAAGAGGAACCGCCGGCGTTGGGATCGTCGTTGGCCATGT CGTCGAGGAAGAGGGTGTTGATGTCGGGGAAGAAGTCCTCGCCGGGGAAG ACGTCGTCGCAGTTGCTATCCGTGAGGGAGTCCGTGACGAAGCCAGTAGT CGCGCCGATAGCGCTCCCCAAAAACCTTATCGCCCTTCTTTCGTACAGGA CTCGAAGCAGCGGGGTCTCGGAGGCCTACTGTCCCGGCTCGCGGTGCACG CCGCAAGACGGGATAGGGAAGATCTAAGTAGCGCAGTGCTCTAGAACTGG AGGCGCAAATGATGTGTGGCAGTGTGTCTGAGAGGAGGCGCGACCTCTCT CTTATATAGACATAGAGGGGTAGGCAGACAGGCTGCGCAGAAGATGAAAC GAACGGACAAAAGTTGAAGCGAACAGGCGGCAGCCCACCGGACAGGCTCT CGTATTAAAAGTCCACTCGAGCAAAACGTTTCAACTTCTGTACGACTGTT CATATATCATTCATGCGTGGCAAAATAAAGCTCGGCTCGGCGAGATTCCC GCAACCCGTGGCGCGTCGTGACGAGGCGAGCGAGGAGGAGCGCGCGTGTG AAACTCTCTTCTTCTCCTTCTCATCCTTTTTACCAAGTGGTAGGAGAGCT CACCTTATAAGCTGGTCCAACTTACACTCAACTAGCAATGTGGGACTAAA CATTTTTTCCAGCTCTTGCCTTGCATGAATGGACTAAATGGACCTCTAGG ATTTCAGGAATTTATTGGCATATAATAGATGAGTTGGGCTTATTTAGACA AAAATTTCAACAAGTATAACTAGGGGGTAAAAATTGGAATTTACTCAATT TTTTTTTGTTGCCTTACGAGGTGTTGTTTCGACAAATCTTTGGGTTCGCC TCTGTTCTCTCCACAGTATGCACAAAGTGTGTGGTACGGCATCACTGTCA GTAGGTACTCGCATCAGGCTCTCGAGCTAGCTTCTAGTCATATGAATACA CGTACAACCCATACATGATTTACTGTCGCTAATAGTAGGATCGAAAGGAC AAACAGGTCGCTTTTGCCTGCCCCGGCAACGTGTTCCTCGCATGCGTCTT GATCGTACTATAGCGCATGCAGACGCGAATCAACGTGCGTGTTTCACGAC ACGGCCTGGCTCCTTAAATAGCGGTGCATCGCCTGCTTGCATCCTCACAC CAAAACCTATAGCTACAACATACACTCAGCTCCAATGGCGAAGAGTATTT TTCTGGCCTGTGTCCTTGGCCTCGTTGCCGTGTGCTGCTCCTCGGTGGCA GAAGCCAGGCCAGCGGCTAACGGCGAGAACCGTCAGCCGTTGGTGAACAC GGTCTACGTGTTTGGGGACTCGCTCGTCGACGTGGGCAACAACGACTACC TGCCGGAGCCGGCGCCAAGGGCGAATCGTCCCTATGGCATGGACCTCCCC GGCAGGCCCACCGGCCGCTTCACCAACGGCTACAACCTTGCCGATGTCGT CTGTAAGCTAGCACATAAACATGATCGAATAATTTCAAACTCAGTCGCAC GCCACCTTCCCCCTCTGTTTCTCGAAAGAAGGGGTATATGTTATTTTCCA AAGTCGAACTTCAAAGTTTAACTAAAATTATTGGAAAAATTAAACATTTA TAATTATGCATATAGAGATCCAAACAGCATGAGCTTAATTTGAAATTCAA AAACATACCGATCAATGGTGCGATATGAGATAAACAGTGTCAACGGATAA ATTTACCCATTTATACATATAGTAACTAGTAAGTAGCTATGTAAATCGAC CTCATGTATGTGACTGTCAATTTGCACTTTTGCAGCACAACGTCTCGGGT TTGAGACAAGCCCGCAAGCTTACCTGTCCATGCTGCCGCATGAGAAACTT CTGCTCGGGTTGTGCCAGATCGGCGCCAACTATGCATCCGGTGGATCTGG CATCCTCGACACCACGGTAATTATATATGCACTCACAAAATTAATCAAGC TCTTGAAATAGAACATACTCCCTCCGTTCCAAAATATAAGATGTTTTAGG TTTGTAAAGAAAATGAATCTAGACTTCTTTTAGTGTGTAGATTCATCCCA AAGTTGAGTGAACCTAAATACTAAAACAAGTCTAGATTCATCTTCACAAA TCTAAAACATCTTATATTTTGAAACGGAGGGAGTATATAGTAAGGCATAA GACAATTCTTTTCAAACTTAACAGAATTACAAAATGAAAAAACGATTTCA TGAACATGTCATGGATACATGTAGGGAGAAGGGACGCTGACTATGCGGAC GCAGATAAAGTATTTCAAGAGGGCGGCTGACCTAATGCTCTGTTTCCCGA GTAAGGAGGACCACCTGGCAAACTCTTTGTTCCTTCTGAGCGGCGGAGGC AATGACTTCTCGGCCTTCAACCCGTCCACTGACAACCCCTCTGCCTACAT CGCCAAAATGGTCTCCACCTACATCGAGCACATCCAGGTACATATCATGG TTGTGGCTTCGTTCACTAAGAGTTTTGTTTATTAAAAACATGAATCAACA ATTAATGATGGTGTTTTATGAAACATATGTGTGTACGGCAGGCGTTGTAC AATCTCGGGGCACGAATGGTGGGGATCCTAGATGTTCCCCCGGTCGGGTG CACCCCAGGGTCAAGGGTCGGCATGTCGAACGGCGCGTGCAACGACGTTG CCAACTCCCTGGCGCAGGGGTTCAACAACCTCCTCAGGACACAGCTCGCC GGCGCCGTGGCAGCCAACATGAAGGACCTCAAGTACTCCATTGCCAGCAA CTACAACATCCTCACCAACATGATCGCCAACCCATTCATTGCTGGTACGT ATACCCATCACTAACATAATCGCCAACCCTATGTCATAAACTGATCTGCC ACACACTTTTAGGGCGGAAAACCTGACAAATGATATTGCTACATCACCTG CCACCTGTGCATGAACATATATGTCTTTAATGTATGAATAGGATTCAAGG AGGTGGAGACGGCATGTTGCGGTGTTGGAAGGTTTAGGGCGGAAGAGATG TGCAGCCATGGCAACACGACGGCATGCACCGGCAACCACAACGACTACAT GTTCTGGGACAAGCTTCACGGGACGCAGGCCACATACGAGCATGGCGTTG TGGCCTTCTTCTATGGTGACGGCCCGGAGTATGCCGAGCCCATCAACTTC AGCACCTTGGTCAAGAAGAAAGGGGGACCTGCACCCCACATTCAGCTGGT CACCAACGAGTAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.