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GrainGenes Sequence Report: AA049027

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Sequence
AA049027
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA049027
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CGGTGATGCCGTCGCTTTCCTGTAATAACCTGTTCGACCTAGCCGGAGAG
CTGCCGCCGGGCGTCATGGTCAACGCGTCGGACTCCTTGCCGGCCTCCCT
GCAGCCCTCGTGTTGCTAGCCGCGGCGCGTGATCGTTTCCCACCACCTCC
CGCTCCGCGCATCCCCGGACGCGTCCTCCCCGTTCGGGTTTTCCTTCACC
GTCGACGCGGACAGCGTCTCTCACCAGCTCCGGTCGGGCCTGCCGGTCTC
GGCCCCCGTGCTCCATGTCGGTACGCTGCCTCCGCCGGCCACTCCACCGC
ACGTTCTACCACGACTTCTGCAAGCACTACATGTGGCCACTCCTCCACTA
CCTGCTCCCGCTTACGACCTCGACGCTGGGCGGCGTTCTCTTCAACCGCG
CGCTCTACAGCTCATTCCTATCCGCCAACATGAAGTTCCTGGAGCGCCTT
ACCGAGGTGCTGAACCCGGAGGAAGACTTGGTGTGGATCCAGGACTACCA
CCTCCTGGCCCTCCTCACCTTGCTTCGCAGGCGCGTCCCGCGCGCCAAGG
TCGGCTTCTTCCTCCACTCGCCGTTCCCATCCCTGGAGATCTTCCGCACT
ATCCCCGTCCGGGAGGACCTCCTCCGTGCCCTCCTCAACGCCGACCTTGT
CGGCTTCCACACCTTCCACTACGCGCGCCACTTCATGGACGCGTGCTCGC
TGCTGCTCGGCCCGGAACGCCACTCCAAGGGCGGGTTCATTGGCATCGAG
TACTACGGCCGTACCGTAAGGGTCAAGATACTGCCCGTCGGGATCGACGT
GGCGCAGCTGAGGTCGGTGGTGACGGCGCCGGAGACGGACCAGGTAGTAC
GCCAGGTGGCCGAGGCGTACAAGGGCCGGCGGCTGATGGTGGGCGTTGAT
GACGCCGACCTCTTCAAAGGAATCGGGCTCAAGTTCCTCGGGATGGAGCA
GCTGCTGATGAAATATCCCGAGCTCCGTGGCCGCGCCGTGCTGGTGCAGA
TCGTCAACCCGGCGCGCAGCGAGGGGCGCGACATCGAGGCGGCAGAGGAA
GAGGCCGGAGCAATCAGCGCCCGGGTGAATGAGCAGTTCGGCAGGCCGCC
TGGGTACACCCCAGTCGTAATGATCACCCGCCCGTTGTCGGTGCATGAGA
AGGCGGCGTACTATGCGGCCGCCGAGTGCTGCGTGGTGAGCGCCGTCCGG
GACGGCTTCAACAGGATACCCTACATCTACACGGTGTGCCGGCAGGAGAG
CACCGCCCTCGATCCTCCTACAAGCGCCATCGTGCTGTCGGAGTTCGTTG
GGTGCTCCCCGTCGCTGAGTGGTGCGATCCGGGTCAATCCATGGTGCGTG
CAGTCTGTTGGGGAGGCCATGGAAGCGGCACTGACCATGTCTGAGGTGGA
GCAGCGGCTGCTACATGAGAAGCACTACAAGTATGTCAGCACCCACGATG
TCTCTTACCGGGCAAAGTCGTTTGACAACGAGCTGCAGCGTGTATGCAAG
GATCATTTCTCGCCGGGGCGGCGGCTTTGGGGGATTGGGTTTGGGATGAA
CTTCAAGGTGGTTGCACTTGGCCCAGATTTCTGCCGCCTTTCTCTCGACC
TCATCGTCCCTTCCTTCAGGAAGACCGAGAATCGGCTAATTCTGCTCGAT
TATGACGGAACCATGATGCCACACAGCAGCTCACTTGACAAGCAGGCACC
CAGCAGTCAGGTCATTTCTGTCTTGAACCGTCTGTGTGAAGAAGATCCTA
GAAACAGGGTTTTCATTGTCAGTGGTTGGGGAAAGGATGAATTGAGCCAC
TGGTTTGCACCATGCCAGAACCTGGGGATTGCTGCGGAGCATGGTTACTT
CACTAGGTCACATCTCTACACACTACTATTTTTCTCGTTAAATTAAGATC
TACGTACTACTAGTACTACCAGATTGTTGGGGCTTTGCATTGCAGTTTTG
TTAACAATATATGCTTAATTTAGATTTGGGTCAAATCTTACAAAATATGT
GTACATACTAATAATCAATGATTTTAGAACCATCACATTAAGATAGCATT
TCAAGATGTGTGTAGTAGTACTAAGCTAGGGCATACCTCTAAAATTAGGC
TCTAGTAATAAATCGTTCTTGCTGCTTCAACAACCAACTTAGGAGCCTCT
TACTGCTTCAATGACGAAAAGTGATTGGTATGGACCATGAACCTAAATCA
TAGTGTCTGTTAAGAATAATCAAAATTATATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATAGATTTTTTTT
CCATATTTGTACGCATAAGCTAGCTGCCTACTCGATCGCTGGTACCACTG
GCATGCTAGTTCCACTGTAGGTGTTCGAGCAGGAGCATTAGTCCTTGTGT
TGCATGCATACATGGGCAGAGGTAGAACTATTCATCGCTATATATGCAAC
GGATACCCATAAATACAGGAGCAGGGGCACTAGTCGCTGTTTTTGCAAAA
TATTTACGGTATAATGTCCATAAAATACATGCATATATATTGCATTTTTT
CTATTTTTTTTTGAAAATGGGCGTTTTATTACGAACATATCGGTTACCCA
TAACTTTTTTTCTATATGGAGTATTACTGGGCATCTCCATCAATTGTATT
ATCCGGAAGGTTCCATAATTGGTGCAGCCACGTCGTCGAGAGGGGCAAGG
AAAAATACACTAGTCAAATTCAGACTTGCAAAAGGAAGCTGTTTTTGACT
AGGTTTGGATTGACCTACACCTACCAAAACTCGTCCAAACTTTAGGGCTG
GGTCAAAGACGACCCAAGGGGCCTTGCCACCCATAAAAGGGCAAAAAGGG
GCATCCAAGAGGCACTACTCAAGTTGTGGCCTTAGCCTCCCCAAGCTGAT
GCACCTCCGCCGCCCCAAAACCCTAGTTGTCGCCCTGCGCCCGACGCCGC
CTCCCTCCTCTGTTCTACACCTCCACGGTGAGGTGCTATCCCGGGGCGGG
TGTGCCTTAGGTACTTCTTCTTCTACTACGACGCCGGAGCGTGTTAAATT
ATGTTAGTTTCTTGTAAATGTCAAAATATTACCCTATTAACATGAATTTA
GTTCATTACAAAATCACGTGCCACACAAAATTGAACATGAATAAGCTAGA
GAAATAGAATAAGCATAGCACACCTATCCATCCTATAATATACTAGTGTG
CCACCAACCTTCCCGAGAGTAGATATCATGTGCGGCCATCAGGAGTCTGC
TTGCATCCAATAACCATAAGTTCTCGTTGGTCCCTATGGGAGCAGGAATG
ACCATAGATGTGTCCAATGGAAATGAGTTGTCCGAATAGCCTGCAAACAA
TTAGAAGACTCGGCATTGTTAAAAACGTTGTTGTTTCTACATCTTCATAT
AAACCAACATAAGGCGAATTCACCAACACATATTCTAGCCTTATTTTTCT
TCTCAATCAGATTCAATCAATTTCCAAAAATGTTCTTATACTTGTTGGTG
GAGGTATATTGTAAGCCATATACACAATATGTCAAACAATACTAGCAAAA
TGACATATATGAAATAAATGCTCGGTTGTTTCATCTAAATCTCAGAAGTA
GCATTTCTTACATCCATGTCAATTTCTTTAAATAGGTTATCCTTTGTAAA
TAAAACCTATATGTTGAAGTAACATATAAAAACTTTAATCTTTATGGGAC
TTTTAACTTCCATAAGTATTTACGAAGGAACCTAGTAACCATTCATGAAG
TCTCCACACATGGACTTCGCCGAGAAGTCCCGCGTAGATGTGAGTTTCCA
AAAAAATACATCTTGTTCATCGGAAAGATTAATTGTCATTAGCTGTTGGC
ATAAGTGCAGCCATAAATTCCACTCATTTTAGCTTATTTTACACGCAAAA
CAATGGAAAAACGAAATGAGCAGCCTACTGTCCTGTCCCGTTCCTACATT
GTTTTAACACATGATGTGATTGAGATTTGGTAGCATAGTGACACTCTTAG
TGATTTTTGTCATGCTAAATTTTAGTTAGTTCTATGTTCCTTCGGTCTTC
AATAGAAAGAGAGCTTTTAGTTGTTTTTAATGTACAACCCACCTACACAG
GTTTAAATCCTTAAGGGTGCAGATTTGGGTTACTATTATTTAAAAGCAAA
ATCGTTGTAGGGGTTCCCCTACCGCATTGCTATCAAAAGATAACTTTAAT
GTTGCTGGTAATAAGAACATTTTCAATTTCCATTATTGATGTTACTATAA
AATTTAATTTAAATGTTATTTGAAAATCATGGCTCCGCCTGTTAGGCCTG
AAAAGAATTATCGTTCCATATTCCCGGCCAGTTTGAAAGTACAAACCCCG
CCACAACATGCAATACCTAGCTACAGCTTTAGTATTCTTAAAACAAATTC
GGAGTAGGTCTTGTAAGTAGGTTTGTTCGGGTACACCGTGTGTGCTGGAG
TTGCACACCGCAAGGTGCCGGCCCAAAGTATTTTACACCGGCCGTTATTA
GATTGAGATGTTCATAAATAAAAATACTAGGCATGCCTCAGTTTTATGTG
TTTGCGTGTTTCACTACGGGAAAAAAAATGTCGCGGCCGTGTAGACACGT
CTTTGCCGTGTGTCAAACGCATCGAAATAGTCTTTGCCGTGTGTAACTCA
AAAAATACACGGCAAAGTACGTGAACACGGCAAAGAAAATACACTCGGCA
AAGTCGACAACGGCACACGGCATAGGTGTTGTCACGGCAACAAGGTGGGA
CCCGTGACCCCACAAGTCCATTTAACGGGAGGAGCTAACGGCCGCAGACG
ATGGTCTCTTTGCCGTGTGCCCTCGTTGGTCCTTTGTCGTGTGTATTCTT
CAGTATACACGGCAAAGGCCCTTTGCCGTGTGTATTCCGTAGTACACACG
GCAAAGGGCCTTTGCCGTGTGTATTCCGCAGTACACACGGCAAAGTCCTT
TTTTTTTTTGCCTTTTATCACATTACTCTTAGGAAAATCATAAAAAAATC
ATTCTAATCCAGAAAAATACAAATAATATATCAAAATTTGCAGAAAAATA
AGATCTATCTATATACACTCAAAAATTAGATACTTATATTGAATAAGAAT
CTTCATGCTCGCCGTTTTGACCATTGTTTAAAACATGCATAAAAAATTCA
AAAACGATCGAAACAATGCGAAACCTTCGCGTGGTGTCATATTATGTGAC
ATAGTTGGTAGGAAAAATATCAAACTTCGTATATTGATTAAGTCTGAAAA
ATCCTTCACAAAATGACCTATCTCATTCGAGGTTTCCTGGCTTTCGGGTC
AAATGACCAATGTTATGGCTAGAATCAAGGTATAGTTTGTGATAATCTGT
CCATATTATGCATGCATGTGCATTATGGAATGACGAATAATGTTGTAGGA
GGAAGTTTTCCTTTTCGTCGCACCAAAAAGCCATTTTCCATTTTACGAGC
ATAAAAACGGGAAATTTTATGAAGCAACCACCAAATGGCTAATTCAAAAT
TCTACCACCCCATTTTTCAAAAATACTAGACCACCTTAAATGTACAATGT
CCCAACGGGGAGATCTCAAACTTTTCCGTCCACTGCAGGTGAAAAAGACA
AATTCCTGCCGAATCGGCAGGAAGTGGGTGAGATATGAACTACAGGTACA
TGATCGGATGTGCATGTTTTTTACAAAAATCATTTTTAGATTCATAATAT
GCTATTTCATCAGAGATCCAGTGAAAGTTTAGAGAGGCTCAGCTCCGAGC
TAAGAATCTTCATACCCGTCATTCGACAAAGTTTGTCGATAGTTTAAAAG
AGTCATAAAAAATTCAAAAACGATCGAAACAATGCGAAACCTTCGCTTGG
TGTCATATTATGTGACATGGTTGCAAGGAAAAATATCAAACTTGTTATAT
TGAATATGTCTCAAAAAAACCTTCACAAAATGACTTATCTCATTCGAGGT
TTCGTGGCTTTCGGGTCAAATGACTAATGTTATGGCTAGAATCAAGGCAT
AGTTTGTGATAATCTGCCCATATTATGCATGCATCTGCCTCATGGAATGT
GAACAATGTTGCAGGAGGAAGTTTTTCTTTTCTTCGCACCAAAAATCCAT
TTTCCATTTTCTGAGTGAAAAAAACGAGAGATTTTATGAAGCAACCATCA
AATGGCTAATTTAAAATGCTACCACCCTATTTTTCAAAAATACTAGACCA
CCTTAAATGGACAATGTCCCAACGGGGAATCTCAAACCTTTCTATCCACT
CTAGGTGAAAAAGACAAATTCCTGCCGAAACGGCAGAAAGTGGGTCAGAT
ATGAACTACAGGTACATGATCTGATGGGCATGATTTTTCACAAAAATCAT
TTTTAGGTTCACAATATGCTATTTCATCAGAGATCTAATGAAAGTTTAGA
GAGGCTTAGCTCCGAGCTAAGAATCTCATACCCGTCGTTCGACAAAGTTT
GTCGATAGTTTAAAAGAGTCATAAAAAATTCAAAAACGATCGAAACAATG
CGAAACCTTTGCGTGGTGTCATATTATGTGACATGGTTGGAAGTAAAAAT
ATCAAACTTGTTATATTGAAAATTTCTGAAAAAAACCTTCACAAAATGAC
CTATCTCATTCGAGGTTTCCTGGCTTTCGGGTCAAATGACCAATGTTATG
GCTAGAATCAACGCATAGTTTGTGATAATATGCCCATATTATGCATGTAT
GTGCATTATGGAGTGGCGAACAATGTTGCAGGAGGAAGTTTTCCTTTTCG
TTGCACCAAAAAGCCATTTTCTATTTTCCAAGCGTAAAAAACGGAGGATT
TTATGAAGCAACCACCAAATGGCTAATTCAAAATTCTACCTCCCCATTTT
TCAAAAATACTAGACCACCTTAAATGTACAATGTCCCAACGGGGGGATGT
CAAACCTTTCCGTCCACTCCAGGTGAAAAAGACAAATTCCTGCCGAATCA
ATAGGAAGTGGGTGAGATATGAACTACAGGTACATGATCGGATGGGCATG
GTTTTTTACAAAAATCATTTTTATATTCACAATATGCTATTTCATCATAG
ATCCAGTGAAAGTTTAGAGAGGCTCAGCTTCGAGCTAAGAATCTTCATAC
CCGTCTTTCGACAAAGTTTGTCGATAGTTTAAAAGAGTCATAAAAAATTC
AAAAATGAGCGAAACAATGGGAAACCTTCACTTGGTGTCATTATGTGACA
TGGTTGTAAGGAAAAATATCAAACTTGTTATATTGAATATGTCTCAAAAA
ACCTTCACAAAATGACCTATCTCATTCGAGGTTTCGTGGCTTTTGGGTCA
AATGACCAATATTATGGCTAGAATCAAGGCATAGTTTGTGATAATCTGCC
CATATTGTGCATGCATCTGCCTCATGGAATGGTGAACAATGTTGTAGGAG
GAAGTTTTTCTTTTCGTCACACCAAAAATCCATTTTCCATTTTCTGAGTG
AAAAAAAGAGAGATTCTATGAAGCAACCACCAAATGGCTAATTTAAAATG
CTACCACCCTATTTTTCAAAAATACTAGACCACCTTAAATGGACAATGTC
CCAACGGGGGGATCTCAAACCTTTCTATCCACTCCAGGTGAAAAAGACAA
ATTCCTGCCGAAACGGTAGGAAGTGGGTCAGATATGAACTACAGGTACAT
GATCTGATGGGCATGATTTTTCACAAAAATCATTTTTAGGTTCACAATAT
GCTATTTCATCAGAGATCCAATGAAAGTTTAGAGAGGCTCAGCTCCGAGC
TAAGAATCTTCATACCCGTTGTTCGACAAAGTTTGTCGATAGTTTAAAAG
AGTCATAAAAAATTCAAAAACGATCGAAACAATGTGAAACCTTTGCGTGG
TGTCATATTATGTGACATGGTTTCAAGGAAAAATATCAAACTTGTTGTAT
TGAATATGTCTCAAAAAAACCTTCACAAAATGACCTACTCATTCGAGGTT
TCCTGGCTTTCGGGTCAAATGACCAATATTATGGCTAAAACCAAGGCATA
TTTTGTGATAATGTGCCCATATCGTGAATACATGTGCATCATGGAATGGC
GAATAATGTTGCTGGAGGAAGTTTTCCTCTTCCTCGCACGAAAAAGCCAT
TTTCTATTTTTCGGGCACAAAAAAGGGGGGTTTTATGAAGCAACCACCAA
ATGGATAATTCAAAATGATAACACCCCATTTTCACAAGATTATATGGATG
TCATATTTGGATTCCTCACATTTTGCTGATCGATTTAGACATTTTATTTG
TCGAATTCCTATTTACGGATTTAAATATATGAATTATTCCATATTAAATA
GAAAAAGGAAATAAAATAAAATCATTTTATTTTTTATTTGGATTCAAGAT
TATTATTACTTTTCATTATTGTTTACTTAAATAATTGTTTGGAATCTAAA
ACTGAGATGTGTGACATCATGGCGCAAGAGTTAATAGGATTGATATGGAT
GTATTAGCAACAAGGTATGATTTCTTTCTCGGAAGCTCATTCAGAAGGAA
CGAAGAAGTTAAGCGTGCTAGAGCTAGAGTAGTGTTAGGATGGGTGACCA
CAGGGGAAGTTTGATTATGAGTGCAATTTGACCTAATATTTAACATAAAA
ATGGTTAAAATATTCTATATGAGATTATCAAGTAAATAATATTCAAAAAG
CTTTGCCGTGTACTTTTTCCACGAGACACACGGCAAATAAAGCTTCTTTG
CCGTGTACTTTTCGAGGAGACACACGGCAAAGACAACTTCTTTGCCGTGT
ACTTTTCGAGAAGACACACGGCAAATAATAGACACCGTCATCTCTGCGGA
AACCGTTATCTTACTTTAGTTTGCCGTGTCTACGCATAAGACACACGGCA
AAGCCTTTGCCGTGTCTTATTTAGAAAACACACGGCAAAGGGCCTTTGCC
GTGGCAAACGTTGCCGTGTGGCATTTACCGTGTGTGTACACACGGCAAAG
CCTTTGCCATGTTCCGAAAGGTCTTTGCCGTGTCTTTTTTCCACACGGCA
AAGAGTCTGTGTACCGTAGTGTTTGTCTATAATCTTGTGTGCCCTAGTGT
TCTGAATTTCAGTTGCAATTAAGAATGCATTCAGGTTCACGTACGTTTTG
AAACCATGCATAAACTCTGGTGGTAGCTGCAGGTCGAGCAGGGAGTCTCC
GTGGAAGACCCGCGTGGTGGAAGGAGATTTCGACTGGAAGCATAGCGCTG
AACCTGTGATGAAAGTTTACATGGAGAGGACGGATGGGTCATCTATAGAG
TACAAGGAAAGCGCGCTA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.