Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA039459

[Submit comment/correction]

Sequence	AA039459
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA039459
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGTGGTTCTGCAGGATCGGTGGCGGAAGCGACAGGAGATGGGGGCAGCA CACATACGACATCGGCGAGTACAAGATCCCTGGTGCTCCAGACGACGCTC CTCCGAGAAAGTTCCCCATCCCCGTCATCGCCGCGCTGGGAGGGAAGCTG TATTTCGTCTTCTATGTTCCGGAAGTCAACCATGATAAGATGGGCATCGT CCACTTGGACTTCAACCATTATCCTTCTCCTGCCGCCGAGCTCGATACGC TCGAGGACGTCAACGCGAGAACCGTCTTCCCGCAAGGCATGTGCTCCGGA GAGCCGTGGCTGGTAGAGTCCCAGGGGGAGCTCTTCCACGTCCTCGTCTG CTTCTGGGATTTCGACTTCGACGCTGATAACATCGGTGCCGTGCTTGTCC ACAATATGGATTTCGAGGGCCGTCGCTGGCTTAGGGTGCATGACATCGGG GACAGGGTCTTCCTGCTGCCGCCTGACGGAGTTGCCGCGGCGTCTGTTGG CCCAGCCCCAAACGCCGAGTGCAGTCCGGCGTGACGATGACGAAGTATTC CGGCGAGTTGCGCGCACGTATAAGAACCAGCTAACAACAATCAACAAGCT AGCTATCTAGCCTGATCAAAATAACTAGCTCTCTCAACTCACACGAGTAC GTACGGGAAAACAATGTTGATGGCTACAGGGCCCTCTCGGTCCTGTTGTT TGTATTGAATCTCACGGTTGTCTTACAAGGCTACTATATGGGTGTATATA TACACGGTAAGACGCAGCGTCAATACGAATATGTGTTGGACTACTAGTCC TACTCGGAACACACACACGCACACGACACCGTTCTGTGTCCTATCGGGAT TATTATTCCTAACAATCACCCCCTAAGCACGATGTGCCCATCTTCACAGC TTGGACACCGATCCTTTCTCGCATCTCCGCAAACTTCACTCGTCCCAAAG ATTTAGTTAGGATATCCGCAAGCTGATCATTGGTGCAAACATAGTTGACT TCAATCTTGCTCTCCTCTACACACTGTCGTATGTAGTGATACTTCGTATC AATGTGCTTACTCCTGTCATGATGCACCGGATTCTTGCACAATGAAATTG CAGACTTGTTGTCAATATTGAGCACCACTTGTTCTGCCTCCCGATTGGTG AGATCACCAAGTAGACTCCTTAGCCACACACCTTGACACGCTGCAGTTGC AGCCGCAATATACTCAGCTTCACAGGATGACTGTGCCACCACCTTTTGCT TTTGTGATAGCCAACTTACTATGCTTCTTCCTAAGAAATATGCCACGCCC GAGGTACTCTTACGGTCGTCAATATCTCCTGCCATGTCACTATCACTGTA GCCAAGTAGCTTCACCTCCTCCTTCTCTTTCGAGTAGACAATACCAAAGT TTGTAGTACCTTTGATATACCTGAGTATATGTTTCACGGCTGTCCAATGC TCCATTGTGGGTGCTTCCATCAAGCGACTCACATAGCCAACGGAATAGGC CAAGTCGGGTCTTGTGTTGATGAGATACCTCAAACTTCCGACAACGCTCC TATACTCCGTTGCATCAACCGCAGGTGCTTCACTCCTTTTGCTCAGTTTA AGACGAGGTTCCATCGGAACATGAGTTGGATTGCATTCTTCCATGCCACA CTTCTCGAGTATCTTCTTTGCATATGCCTCTTGGCATAGCGTGATCTCAC CCAGCTTTTGATGTACCTCGATCCCAAGGTAGTAGCTCAACAAGCCTAGA TCACTCATCTTGAATAACTCCTTCATATGTAGCTTGAACTTTGCAATCTC CTTCTCATCCGCTCCTGTTATCAATAGATCATCAACATAGATGCCAACTA GTAGATGATCCCTTCCTTTACCTCGCTTATACATCGCATGCTCCAGTGGG CTCTTCTCGAATCCGAGAGAGATTAATGTACGATCAAGCTTGATGTTCCA CGCCCGAGGGGCTTGCCGTAGCCCGTACAACGCCTTGTGTAGCTTCAAAA CCTTGTGTTCTTCTCCCTCTTTGATGTATCCTGGTGGTTGCTTCACATAA ACTTCTTCTTCTAACTCCCCATTCAAAAACGTGGATTTCACATCCATGTG ATGCAATTTCCAAGATTCTTGAGCTGCGAGAGCAATAAGTAATCTCACCG ATTCCATCCTTGCAATGGGAGCAAACACTTCTTCGAAATCCACACCTTGC TCTTGCACGTATCCCTTGGCCACTAGCCGAGCTTTGTGTTTCACCAACTT CCCTTCGGCATCCTTCTTGATCTTGTACACCCACTTGAGCCTTATGGCCT TGTGATTGTTGGGTAGATCGACAAGCTCCCATGTATCGTTGTCGCGGATC GACCCCAACTCCTCATCCATAGCCCGACGCCAACACTCCTCCGTATTAGC ATCCTCGAATTTCGTCGGCTCTTCGGTGAGTAAACACCGACCTTGTCCTC TCCCTCGCGCACGCGCTGTACGAAGGGTCTCCGGCGGATACAACTCCAGT ACACTTCGGAATTTTTCTGGAGTAGGTGGCCGTATCCTTTCTTCCTGTGC ACTTGGAGGAGACGTGGAAGCTGACGTAGTACTTGTTTCAGCGTCTACTG AATTTCCTGCAGTTTCTGTCGGTGTACTGCATGTTGGCGACATGACATCG TCGCCCGCGTCCACTTCTGGACTGCCGCTAGTCCCTCCTGGACGGGAGTG TGCAGCTGATGGGCCACTTGCGCCAGGGCTCTCGTTCGCGCGTGGACTGG ATGGCGACGCCGAGCCTCCAGGTGCAGCACGAGAGCTGCTGCTCGTGCCG GGACTCCCACGCGGAGATACCTCTCCAGGCGTAGCGCTGCTGCTGCTCAC TTCCGGACTTTCATCTTCTGAACCAGCGCCTAAATCCGTAACGCCACGGG ACGCTGTTTCTTGATCATCTGCATGCGAATCACTGTAGACTACAGTAAAT ATTTCATCAGAAATTGATTGTACCGGTTCCGCAGAGCCCGAATTCCATGA TTTCTCCTCCTCGAAGACGACGTCGCGTGTCACCACCACCTGTTTTTTCA CTGGATTGTACGCGCGATACACCTTCGAACCGTATTCATAGCCGATCATG ACCATTGGAGTACTACGCTCCACCAACTTGCTAGTATGCCCGGTCACCGT CTTCACATGCGCCACGCACCCGAAAGTGCGAAGATGATCAACCGAGGGCT TGCGCCCGTACCATGCTTCGTACGGCGTCATACCAACTACACTCTTAGTT GGCGCCCTGTTCAGCAAATAGACAACTGTACTAACTACCTCACCCCAAAA CCTGCCTGGCATGCCTTTGCTCTTCATCATGCTGCGTGCCATGGCCACCA CGGTTTGGTTCCTTCTTTCCACAACACCGTTTTGCTGCGGTGAATATGGT GCGGTGAGATACCGCCGGATCCCATGAGCTTCACAAAACGCCTTGAATTC ATTGGATTTGAACTCCCCACCCCGATCGGTACGGAGGGCCTTCAACTTTG CCTCGGACTCCACCTCGGCTGCCATCTTCACAATCCTGAACGCTTGCAAA GCTTGATCCTTACTCTTCAGCAACACAACCCACATGTATCTACTGAAGTC GTCGACAATGAGCAAAAAGTACTTGTTCCCGGCGGGGGTCGCCGGCATGA TTGGTCCGCATAAGTCTCCATGCACCAACTCAAGAACCTTACTTGCTCGA TATTGTCCCTCCCTTGGAAACGGGGCTCGCCTTTGCTTCCAAATGAGACA ACCGTCGCACACCTGCTCAACATGATCAACACACGGTAAGCCACGTACCA TCTCCTTCTGTCCAAGTTGTCGTAGAGCTTGGAAATTTAGATGTCCGTAG CGAGCATGCCACTGGTACCAAACGTGAGGTTCAACTCAGAAAACTGAGCC TTGTCGCCGGTCATGTGGTTGCTAGCTCCTGTGTCGAGGTACCAAACGTC GTGAGCCGTCTGCATCCTCCGCGGGAAGACCTTCTCTTCCACGAGCTTGA CGATCTCCGTAGCTGACTCCTGAGGAGTTGATTCCTTGGTGGTCATTAAC TCGCAAGCTTCGAGCATGAGCATCATCGGTCCATCATCTCCTTCCTTCGC CATGAGCCTTCTCCTTTGAACGGTTAGGACACTCCGATTTGAAGTGCCCG AGCTGATTGCACTTATGGCAGCGAAGATTCTTCTTGTCGAATTTCTTCTT TGGCTTCTTCGGCTTGCTGTCCGACTTCTTCGCCGGGACCGAACCATCGC CACTGCCAGATGCCTTATCGCTCCTCTCCTTGGCGACCATTCCCTGCCAC TGGGCACGTGTAAGCATGAGGTGCTCATCTTGATTCGCGTCGCGTAGGTC ATCTTCATCCGCTCGTCATGCGCCTTGAACCGTCCAACCAGGTCATCCAT CGTGAGGGTGGTGAGATCAACGCATTGCTCGATTTCCGACACCACAGATA TGTACCGCGGCGGCGCCGCGAAGGAAACGCATTACGACTGAGATATCTTC CAGCTTCTCACCTTGCGCGCGAATCCCGTTGACAATTGTGGCTACCCTCG AGGCAAAAGCGTCCAGCGTCTCATCTCCTTCCATCTCCAGGTTCTCGTAC TTCTTCTGCAAGGTTTGTAGGGTCGCCCTGCGGACACGCTCGTGCCCAAG ATTCAACGTCTTGAGTGTCTCCCACGCCGTCTTTGCAGAATCCTTCGAAA TCAGGTGCTGCATCACGTCCGCCGGCACCACGGAGCCGATGGCCGTGAGT GCCTGTCGGTCCTTGTGGTAATTCGGCGCGCCCTTCTTGAACTCGTCGCT GCCGGGATCGACAAACTCCCAGATGTCGTTGCCCTCCATGGCCCACTCCA TCCGTTTCGCCCACGTCGTGTAGTTGCCGCGATCATACTGCGGGTACTGC GACGACACTGATGCACCCGCAGCCGCACCGGAGTACTCGCCTTGATCCTT GCCCGTCATGACCTCCCGTTACTAGGAGATCCTCCGCGAGGCTCTGATAC CAATTGTTGGCCCAGCCCCAAACGCCGAGTGCAGTCCGACGTGACGATGG CGAAGTATTCCGGCGAGTTGTGCGCACGTATAAGAACCAGCTAACAACAA TCAACAAGCTATTTATCTAGCCTGATCAAAAGAACTAGCTCTCTCAACTC ACACGAGTACGTACGGGAAAAACAATGTTGATGGCTACAGGGCCCTCTCG GTCCTGTTGTTTGTATTGAATCTCATGATTGTCTTACAAGGATACTATAT GGGTGTATATATACACGTTAAGACGCAGCGTCAATACGAATAGGTGTTGG ACTACTAGTCCTACTCAGAACACACACACGCACACGACACCGTTCCGTGT CCTATCGGGATTATTATTCCTAACAGCGTCCTGTTCTGCCAGCGCCTGTA ACTTGACAGGGAATCGCATCTACTTCATGAAGAACTTCAAGGAGGACGAT GCCGATATCTGCATCTTCGACATAGAGGAACAAGTCATGGAGGTTGTCCA AGCACATGACCTAGACTTGGTCCTCGTCCGCACAAATCCTTACTGGATTG TACCTCCCACTAGTAGTATCTAGTGGCAGGCTAGACTCCCGGGTCGCCTC GCGCGGGGAGGCTCCGGAGGCGACAAACCCTAGAAAAGCCCCGCCCCGAT CTCCTCTCCCTCGGCCGCTGCCGCCGTCGGCACCGGCGGTGGCAGCCGCA CCTGGCCGTCGAAGGCGGTGGGCGAGGGAGGCGCTCCCCCGACGGATCCC CTTCGCGCGGAGGCGGATCGTCACAGGGGTGATGAGGGTGGTGTGTGGGA GGCGGCGAACCTTGGCGGGAAGGCAGCGACGACGCGGGGAAGGTGTTGGA GATATGCCCAAGAGGCAATAATAAAGTGGTTATTATCATATCTTCACACT TATGATAAATGTTTACATACCATGCTATAATTGTATTAACCGGAAACATT AATACTTGTGTGATTTGTAAACTAAAATAAGAGTCCCTAGTAAAGCCTCT TGTTAAACTAGCTTGTTGGTTAATATATGATCATGGTTTCCTGATCATGA ACATAGAGATGTTATTAACAACAGGATCATATCATTAGGAGAATGATGTG ATGGACATACTCCTATAGATAAGCGTAGCATAAAGATCAAGTCATTTAAA TAGTTCAATTGCTATATGCTTTCTGATACATAGTAACCTAATTCCTTCGA CCATGAGATCATGCATATCACCTTTGCCGGATGGATGCTTTGATGACATC AAACACCACACCGTAACTGGGTGGCTATAAAGGTGGCATTGAGTGTTCGG AAAGTATTGGTTGAAAGACATGGATCAAGAGTGGGATTTGTCCATCCATA TGACGGATAGATATACTCTGGGCCCTCTCGGTGTAATGTCATCCAATTAG CTTGCAAGCATGTGACTGGATCACAAGGGATCACATATCACGGGAACGAG AAAAGAGTACTTATCGGTAACGAGGTTGAACTAGGTATGCACAGATACCG ACGATCAAAACCTCGGATAAGTAAACTATCGTGAGACAAAGGGAAATTGG TATCGTATGTAAGTGGTTCATTCGATCGCAAAGTAATCGTAGAAATATGT GGGAGCCATATGAATTTCCAGATTCCTCTATTGGTTATTGTTCGGAGAAG TGTCTCGATCATGTCCGCATAATTCACGAACCGTAGGGAGACACACTTAA GGATTCGACGTTGTTTGAGTAGTTATGGTAGTATGAGAAAGAGACCGAAT GTTGTTCGGAGTCTCGGATGGGATCCGGGATATCACGAGGTGATCCGGAA TGGTCCGGAGAATAAGATTCATATAAGGAAAGTCCCGTTTCGGAGTTCGG AAATGATTCCGGTGTTTTCATCGGGAATGTTCTAGAAGGTTCCAGAATGT CCGGCACTCCGGGGGGGGGGGGGGGAGGGGTACATGAATGTGTCATTGCA TATTGGAATGATTGCATCATGTACTAAGTGTTCTTGCTGTTCCAAATAAA GGATTAAATTGAATCCTAAAACAGAAAAGTCAAATGGCCAGTTTGAAAGT CAAACGGCTAAAACAAGAAACTGTGGGAAACAAGCAAGAGGAGGCAAAAC CGACTTGGGGGAGGAGTCCCTCCTCTCCAAGCCGGCACGCCACCCAAGGC CGACTTGGGGAGGGACTCCCTCCCCTTGGCCGGCCCCCTCCACCCATAAA AGGAGGGGCAGGGCCTCCTCCTCTAGACACACAAGTTCCTATCCTCTAAT CTCCGGTTTAGAGCCGTTTTGGTTTAGAGCTTCTAATTGTACTAGCCTTC GGTTTAGAGCCTTCTAATTGGTGTGTCTAAACCCTAGACCACTAAAGCTC TCTCATACTCCACCATACTCGCTCCGGCTTAAGGCGAAGCCCTGCGGGAT CTCCCCTCTACTTCCGGTACCACGCCGTTGTGCTGCCGGAATCGCGAGGA GAGTGCTACAACCTCCGCTGCCTGCTGGAACAAGGGAGAGGAAGGTCTTC GTCGAGTACCGAACGTGTGACCGACTGTGGGAGCGCTGCCGGAACGCAGC GCCGGAAGGATCGTCTACGCGATCTTGAGATCGGAAAGAGTACAACTACA TCACCCATGAGAATCTGCTCTCGTTAACCGCTTTGGAATCTTCGAGGGTA AGTTAGTCCATCGACTCGTTGCTACAATCTAGTAGATAGATCTTGGCTTG TTTGTTTGTATGCGATAGAAAATTTTGTTTTCCATGCTACGAACCCCTAC AGAAGGTGGCTCGGCAGCGCGAGGCAGTATGGAGGGCGGCGGAGGCCCGT CTGGAGTGCTGGCGCGCAGCGGCCACTCGTTCCCCGTGCTGGCGGCTTGT CCGTTCTTCCATGGCGGCGGAGTGGGGCGATCTGGTGGTGGAGGTGCCGG CGATGGAATTCCGTTGGAAGATCTAGATCGGCTATCCAACCCTAGTTGCC TCCTCGATCCGTTCTCCTGGAACCGGCCGGCGGTGTGGGGATCGCTGTGT CGGATCTAATAATGGTGGTGGTCCTTTGGTTTCCTTCAAACGATGACGAA GATCTGCTTGATGTCTTCCCTCGTTGATCTGGTCTGGAGAGACGGGTTCC GGAAGGCTCTGCCGGCGAACTCCCATGGGCGTATCATGCCTGGAGATTGC TGGATCGGAAGGTATTCGGTCGTGCGCACCTTGTTTTTCTGGCCGTTTGG TTTCAGCGGGAGCGTTGCGAAGCTCTGCTGTTTGTTCCCACCAAGTGCCA TTCTTAGTGTCATGGTGAAGTCAGATGCGGAGAATGTCAGTAAAGCGGAA TATGAGGATAGCAATGGTGATTTTTGTTATTGTGGCGACGGTGATTTGGC TGCGGGATCTGGGACTCGTTGCAGCGACTGTTGGTGCGGGAAGACAACAC AGGGGGAGTTCCCAGTCTTTCTTGCAGGGTGAAAATCCAAGGTCTGGCCT TAACTGGTTGTGCCTGGCAATGAACTTGTTGAAGACATTGTTTTGTGAGG AAAGACTTTCTCCAGGGTGAAAACCTATGATCTTTGATCGGGCAACGACG GCGCTTGGGCATTGTTTCCTTCTTGAAGGCGTTGTTATTGGAGTGGGGAC TACTGGTGTTGTTCTGATGGTGTCACTGTTGTTTCTTTGAGGATTAGTTC TCTGTAGCGGGACTTTTTTTTTGTAATTCTTCTTTCTCTTTTTGGGTCGT GTGCATCCGTAGAGCCGCTAGGGCATGCGTTGTTGCAGAGGCCGGGTGTA ATTGGTATCCTGTGATATTAATATATGCTCTTTTCCAAAAAAAAAATCTA GTGGCAGAAAAGATTAATTAGAGGAGGTAGATTAGTTATATATTACCTCT TATCTTTACTATTAAAAAAATTACTACTCCCTTATATCTATATTAATTGA CTTTCATTTGTCAAAATTTAAATAAACCTATATACTAAATAGTGTCTAAT TTAAATCAATTAATATGGGCCGGAGGGAGTATTTAAAAGAAGTTGGTATT GGTAGGTCATAATTTTACACTTTGACATCAAACATTGAAACAATCGGTAC GGTAGGATCTGCATTTCATGATACAATGATGAGTCCTCTCTCTCTACATG CACAACATGAGAAGATTGATATACCGACGGCCGGGTCTCATCGGTATAGC CCCAAAATTCTATCAGTGTAGGCCGCCGACGGTTGCCGTCGGCATAGAAA AATCGTCGGTGTATATAGCTACACCAACGGTCGTCTGGGTCCCACCTAGA TGACTAACGATCATTTGGCTACGCCGATGGCTCAATTTTTTAAACATTTT TGAATTGTTTAACTCGTTAATCTCACATGGATATTTTTAATTCTAAATAT ACTTAATCTCAAGTGAAATTGTACTAGTAGTCAAACTTCCCAATCGATCA ACCATCCTAACAGTACTCTAGCCCCAGCACACTTAACTTCTTTATTTCAT CCACATGAGCTTCCGACAAAGAAATTAGAACTTACTAGCATAAAGCCCGT GCGTTGCTACGGCGCTGTCGCCTTGTTAAATCACTATTTGAAAATTTATT CGCTAACTATGAGCACGATTACACGAATTTCCTTAGTGCATCTAGTAACA AAACAGATTACATAAACATGAAAAGGTAAGCAAACTTATGTAGTCAATAT ATGTGGTTAATTACAAGATTGATTCACTTTAGCCCAACTATGGACTTAGA TAGAACAAACTTGTGGAGTACTTGATACAGATCGAATAAATTTACTCTAG TAATATCCAATTTGGCTTGATCAATTGAAGGGGGATTCTCTTGTATTGAC TTCGGCCAACATCAAGCGAATACCACCACATCGAGCCTAAAACAAATGAG ATCAAATGTAAAATATCTATTAATGTTATTTGATCAAAATGGATCAACCA TTATATGGACCATGGATAGAGAGCTCTAATTGAAGTATAAGAAGGTGCCA TATTTTGTAATGCAATCATTGGGCCTGTTCAAAAGTCCTTTATTTTACGC ATCTTCTTGGTCTTGAGTGTATCTGGTTGTAGTTCAGTTCAAACAGATCA AACAATATTTTACTGAACTTCTAAATAATTGGTGATGATACTAAATGATA TTGTACGATTGGGGCTGTTCAAACAGTGTGCCAAATTAAGAAAATTTCTG ATGCAAGCTTAACGACAAGATTTGTAGAGTCGTGGTTACTTCCATGGTGC CATCGATTGTGGTGAGGCAGCGATGCACACGCGACCAAGACCTCAAGGAA ACGTTGATATCGTTGCTGCCAAGGCTTCAAACTTTGCCATTACTTCCATG GCTAAATAAAGCCACACCACCGCTGCCGCTGTGAGCTTGGATGCTTCGAT TCGAAGCCCTACAGACGGCGTGACACTGGAGGTCGGCATCAGGGGCAGAC CAAGACGATGCAATTAGAAAAGTAGGGCCAATTTTGTCAAAGAAAATTAA AATTCCATTGTTCACTCGACCACAGCTGGGAGGACGATGCAGACAAGGAA TCGTACGACGCCAAGGGCGAGGGCGTCGCACCGCCCCGGCGCTTGCAGGG CGCGGACGACCGCATCCTTCTCCTCTTTCTCCCCCTCATCTCCAGCTCTT CCCGATTCCTCGTCCGCCCCCGCATCCCATCGCCCCCATAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.