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GrainGenes Sequence Report: AA047142

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Sequence
AA047142
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA047142
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGCTGGCGCAGCTGATGGGTAATAATATCGGCGAAGTCACGGCCGTTGT
GGTGCGCTACTATGGCGGCATTATGCTGGGCACCGGGGGTTGGTAAAAGC
CTACGGCGGTGGCGTACAGCAGGCATTACGCTTGCTACCACGTACGATTA
AAGTGCCGATGCTCAGTTTTCAGCTTATCTGTGACTATGCGCAACTGAGC
GATATTGAACGCATGGTGAGCCGGTTTGACGGGCAGCTGTTACACAGTGA
GTTTTTACACATATCACCCTGACGCTGGCGCTGCCTCATGCGCAGGTTGC
AGGTTTCAGGCAGAATTATCCGACTTTAGCCGGGGCGCACTGCAGCTAGC
TCCGCTCAAATAACTCTTAACGTCAGGAAGGAACGGCAGAATGCATTTTC
GTGCCATAACCCGCATAGTGGGTTTGCTGGTCATCTTATTCTCAGGGACG
ATGATCGTGCCCGGACTGGTGGCACTGATCTACCGCGACGGGGCGGGGCG
TGCATTCACGCAGACGTTCTTTAGGCGCTGATGATCGGAACACTGCTATG
GTGGCCGAACCGTAAGCAGAAAAGCGAGCTTAAGCCACGCGAAGGCTTCC
TTATCGTAGTGCTGTTCTGGACCGTGCTGGGCAGCGTAGGGGCAATGCCC
TTTATCTTCGCCGAGCAGCCGAACCTCTCGTTAACCGACGCCTTCTTTGA
ATCTTTCTCCGGTCTGACAACCACGGGTGCAACGACGCTGGTGGGGCTGG
ATTCCTTGCCGAAAGCGATTCTCTTCTATCGCCAGATGCTGCAGTGGCTG
GGGGGGATGGGATCATCGTACTGGCCGTTGCCATTCTGCCGATCCTCGGC
GTCGGTGGCATGCAGCTTTATCGTGCGGAAATGCCAGCCCGCTGAAAGAC
AACAAAATGCGGCCACGCATTGCGGAAACCGCTAAAACGCTGTGGCTAAT
CTATGTACTGCTGACCGTGGCCTGCGCGCTGGCGTTATGGCTGGCGGGGA
TGCCGTTGTTTGATGCCATCGGTCATAGTTTTGCCACTATCGCGATTGGC
GGCTTTTCCACCCATGATGCCAGCATCGGCTTTTTTAATAGTCCGACGAT
TAACACCATCATCGCTATCTTCCTGCTGATCTCCGGCTGTAACTATGGTC
TGCACTTCTCATTATTAAGTGGACGTAGCCTGCGAGCATACTGGCGCGAC
CCGGAGTTTCGCATGTTTATTGGCGTGCAGATCACGCTGGTGGCTATCTG
TACCGTGGTGCTCTACTTCCATAATGTTTACCAGACCGGGCTACAAACGC
TGAATCAGGCATTCTTCCAGGTGGTCTCAATGGCCACCACCGCCGGCTTT
ACCACTGACAGTATTGCTCGCTGGCCACTATTCTTGCCGGTGCTATTGCT
GTGCTCAGCGTTTATTGGGGGCTGTGCCGGCTCAACCGGCGGCGGCCTGA
AGGTGATCCGCATTCTGCTGCTGTGTTCAAGCAGGGCTCGCGTGAGCTGA
AAAGGCTGGTGCACCCGAATGCGGTATACACCATCAAGCTCGGCAACCGT
GCGCTGCCGGAACGTATTCTGGAAGCGGTGTGGGGGTTCTTCTCCGCCTA
CGCGCTGGTGTTTATTCTCAGCATGCTGGCGATCATTGCCACCGGCGTTG
ACGACTTCTCGGCGTTTGCTGCGGTCGCTGCGACGCTCAATACCTTGGCC
CCGGTCTGGGCGTGGTCGCGGACAACTTACTTCCATGAACGACACCGCGA
AGTGGATCCTGATTTTAACGATGCTGTTCGGGCGTCTTGAAGTCTTTACC
TTGTTAGTCCTGTTTACGCCGACCTTCTGGCGCGAATAATTGAGAGTGTA
ATCATGAAAGCGTTAATCCTGTTTTCCAGCCGCGATGGCCAGACCCGTGA
AATTGCCTTCTATATAGCTAACCAGATAAAAGGAGAGCGCGAGTGTGACG
TGTTCAATATCCAGCTGGTTGATGAGATTGACTGGGCGCAGTATGACCGC
GTGCTGATCGGCGCCTCTATCCGCTATGGACACTTCCAGCCGGTGGTAGC
GAAGTTTGTGAAAACACACCTTAGAGAGCTGCAGCAGCGTTCAAGTGGCT
TCTTCTCAGTAAATCTCACTGCGCGTAAACCAGAAAAGCGAACTCCGCAG
ACCAATGCATATACCCGTAAGTTTTTACTACAGTCGCCATGGGAGCCAGA
TTGCTGCGCAGTTTTCGCAGGTGCGCTGCGCTATCCACGCTACGGCTTCT
TTGAATCGCATCATGATCCAGCTGATTATGCGTATGACAAACGGCGAAAC
CGATGCGAGTAAGGAAGTGGAGTATACCGACTGGCAACAGGTGACACGAT
TTGCCCATGAATTCGCTGCTTTACCGAGCAAGTTGTCGTAAAAAAGCACG
CTTCGCTGAAAAATGACGCGCTCAGTCATTTATTTGCAATAAACGCTTGT
CACGCGCGTCAGGATCTCCCTATAATGCGCAACCACTGAGACGGCACAAC
GGCTTACAGGCCAGCGGCTCAGGAGGTTCAGGAAGTAACTGAACCGCCGG
AAAAACTTCTTCAAAAAGAAGTTGACTCCGAAGGAGGAAAGCGTATTATA
CGCCACCTCGCGACAGGAAGCCCCGGCACTGCTCGCAACGCTCTTTAACA
ATTTATCAGACAATCTGTGTGGGCACTCGCAGGATTGATATCAACGTCTC
CGGACGTAAAAAATATCAAGCCTCACGAGTGAACACATAATGAATTCATT
ATGACGTTTTACAGATGAGCACCGCTGAACTTGTTTCAGCAAATCGAACT
TTTAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCC
TAACACATGCAAGTCGAACGGTAGCACAGAGAGCTTGCTCTTGGGTGACG
AGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCCGATGGAGGGGGAT
AACTACTGGAAACGGTAGCTAATACCGCATAACGTCTTCGGACCAAAGTG
GGGGACCTTCGGGCCTCACACCATCGGATGTGCCCAGATGGGATTAGCTA
GTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGA
GGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAG
GCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGC
CGCGTGTATGAAGAAGGCCTTCGGGTTGTAAAGTACTTTCAGTGGGGAGG
AAGGCGATGAAGTTAATAGCTTCGTCGATTGACGTTACCCGCAGAAGAAG
CACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCG
TTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTCTGTCAAGTCG
GATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATTCGAAACTGGCAGG
CTAGAGTCTTGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCG
TAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACAAAGAC
TGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGG
TAGTCCACGCCGTAAACGATGTCGACTTGGAGGTTGTGCCCTTGAGGCGT
GGCTTCCGGAGCTAACGCGTTAAGTCGACCGCCTGGGGAGTACGGCCGCA
AGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT
GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGCCTTGACATCCA
CGGAATTTGGCAGAGATGCCTTAGTGCCTTCGGGAACCGTGAGACAGGTG
CTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGC
AACGAGCGCAACCCTTATCCTTTGTTGCCAGCACGTAATGGTGGGAACTC
AAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGT
CATCATGGCCCTTACGGCCAGGGCTACACACGTGCTACAATGGCGCATAC
AAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTA
GTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTA
ATCGTAGATCAGAATGCTACGGTGAATACGTTCCCGGGCCTTGTACACAC
CGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACC
TTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTA
ACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTGAAG
ATACCTTCCCGCGTAGTGTCCACACAGATTGTCTGATGAAAAAGTAACGA
GCAGAAAAACCTCTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCT
GATAAGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGC
ACTCATGCGGCGTTATGCACTCGGTCGTTTACCAAAGTAAACTTCCCTCC
TGCATGCCTTGCCTGAGCACAATTACATTTCTTCTTTGGAATGTAATGGT
AGTAAAAGGTTTCTGTAAGACTGTATGGGGCTATAGCTCAGCTGGGAGAG
CGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCAC
CATACTGTTTTTCTAAATAAAATACTTCAGAGTGTGCTGGATAACAGCAT
GCTGCGAAGTATTATGCTCTTTAACAATCCGGAACAAGCTGAAAATTGAA
ACGACGCGTCGTATTCATTCTCCGTAATAAGAATGAAGTTAACGATGCGT
TCGAGTCTCTCAAATGCTCACGACAGCATGCCGTCCTTCGGGACGCTTGT
GGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCTAGGCAGTC
AGAGGCGATGAAGGGCGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATA
TGAACCGCAATAACCGACGATACCCGAATGGGGAAACCCAGTGTGATACG
TCACACTATCATGTCATGAATACATAGTGGCATGAGGCGAACCGGGGGAA
CTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCA
GTAGCGGCGAGCGAACGGGGAACAGCCCAGAACCTGAATCAGCTTGTGCA
TTAGTGGAAGCGTCTGGAAAGTCGCAGGGTACAGGGTGATACTCCCGTAC
ACAAAAATGCACTTGCTGTGAGTTCGATGAGTAGGGCGGGACACGTGACA
TCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACT
GACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCG
AGGGGAGTGAAACAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCA
CCTTCGTGGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATA
TTCTGTAGCAAGGTTAACCGTATAGGGGAGCCGCAGGGAAACCGAGTCTT
AACTGGGCGTTAAGTTGCAGGGTATAGACCCGAAACCCGGTGATCTAGCC
ATGGGCAGGTTGAAGGTTGGGTAACACTAACTGGAGGACCGAACCGACTA
ATGTTGAAAAATTAGCGGATGACTTGTGGCTGGGGGTGAAAGGCCAATCA
AACCGGGAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGT
GAACTCATCTTCGGGGGTAGAGCACTGTTTCGGCTAGGGGGCCATCCCGG
CTTACCAACCCGATGCAAACTGCGAATACCGAAGAATGTTATCACGGGAG
ACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGACC
GCCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGG
CACAGACAGCCAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAAAGC
GTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTA
AACCATGCACCGAAGCTGCGGCAGCGATACGCAAGTATTGTTGGGTAGGG
GAGCGTTCTGTAAGCCGTTGAAGGTGTGCTGTGAGGCATGCTGGAGGTAT
CAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCG
CTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGA
GTCGACCCCTAAGGCGAGGCCGAAAGGCGTAGTCGATGGGAAACGGGTTA
ATATTCCCGTACTCGGTGTTACTGCGAAGGGGGGACGGAGAAGGCTATGT
TAGCCGGGCGACGGTTGTCCCGGTTTAAGCGTGTAGGCTTGAGTTCCAGG
CAAATCCGGAACTCTTTAAGGCTGAGGCGTGATGACGAGGCACTACGGTG
CTGAAGTAACAAATGCCCTGCTTCCAGGAAAAGCCTCTAAGCATCAGGTA
ACATCGAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCA
AGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGTGCCGTAA
CTTCGGGAGAAGGCACGCTGTCGTTAGGTGAAGTCACTTGCTGACGGAGC
TGAAGGCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACA
GCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGT
GCCGGAAGGTTAATTGATGGGGTTATCCGCAAGGAGAAGCTCTTGATCGA
AGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAAT
TCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGCGTAATGATGGCCAGG
CTGTCTCCACCCGAGACTCAGTGAAATTGAACTCGCTGTGAAGATGCAGT
GTACCCGCGGCAAGACGGAAAGACCCCGTGAACCTTTACTACAGCTTGAC
ACTGAACATTGAGCCTTGATGTGTAGGATAGGTGGGAGGCTTTGAAGCGT
GGACGCCAGTCTGCGTGGAGCCAACCTTGAAATACCACCCTTTAACGTTT
GATGTTCTAACCTGGCGCCGTGATCCGGCGTGGGGACAGTGTCTGGTGGG
TAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAG
GTTAGCTAATCACGGTCGGACATCGTGAGGTTAGTGCAATGGCATAAGCT
AGCTTGACTGCGAGAGTGACGGCTCGAGCAGGTGCGAAAGCAGGTCATAG
TGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTA
CTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGT
GTTTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAGTAGGTCC
CAAGGGTACGGCTGTTCGCCGTTTAAAGTGGTACGCGAGCTGGGTTTAGA
ACGTCGTGAGACAGTTCGGTCCCTATCTGCCGTGGGCGCTGGAGAATTGA
GAGGGGTTGCTCCTAGTACGAGAGGACCGGAGTGAACGCACCACTGGTGT
TCGGGTTGTCATGCCAATGGCATTGCCCGGTAGCTAAGTGCGGAAAAGAT
AAGCGCTGAAAGCATCTAAGCGCGAAACTTGCCTCGAGATGAATTCTCCC
TGGGTCCTTGAGACCCCTGAAGGGACGTTGAAGACTACGACGTTGATAGG
CCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGACCC
GTGAGGCTTAACCTTACAACGCCAGAAGCGTTCTGGTGGCGTTCGAGAGA
CGCAAAAGAGATTTTCAGCCTGTAACCGGATAACAATTTAGCGGAAACGA
AAGATTTTGTGCTGAAGCAAGGCGGCAAGCGAAGGAAAGAAAGGAGCATA
CTGAAGTATGTGACTGACTTTACAAGCGCGGCCAACGCAGCAGCAGTGCA
AAAGATTCGTTTCGTGCACCAAGATTTGCCTGGCGGCTTTAGCGCGGTGG
TCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGAT
GGTAGTGTGGGCCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAAT
AAACAAACAAGCCTCATGCGAAAGCATGGGGCTTTTTTGTGTTTCTCGCC
TGCTAAAATACATACCCGTATTAACTGCACTCCCTCTCAAACTGCATATT
TTTATTAGATAGCGATAATAGCTGTTTAATATCCCCCCAAATTACGACCG
ATAACTGCACAAAACTCGATGAATTCACCACTGTTTGCGGCGATAAAATC
CTCAACTCACCCCTGATGAATCGGGTACACTACCCGCAGTTTAATATTTA
AAGGTTTTATTATGTCCTGCCAGCAGCATTCATTAAAAACATGGAATACA
TTTAGCCTCGACGCCTGTGCCAACAAGATCAGCGTGGCAGATAGTGCCGA
GGCTCTTGCCAATTTTGGCAGCAGAGCACCGATCAAAATGAACCTGTATT
ACTGCTGGGAGAAGGAAGCAACGTACTGTTTCTGGGAGATTTTTCTGGCC
AGGTAATCATTAACCGCATCAAAGGCATTTGCGTATCTGAAACGGCTGAT
GCATGGTCTCTGCACGTGGGCGCGGGTGAGAATTGGCACCAGCTGGTTGA
AACGTCTCTGGAGCAGGGACTCTCTGGTCTGGAAAATCTGGCATTAATTC
CGGGCTGCGCCGGTTCAGCGCCGATTCAAAATATTGGTGCTTACGGCGTC
GAGCTGGATCGGGTCTGTGAATATGTGGATATCGTTAGGCTCTCCGACGG
TGTACAGCAACGTTTAACTGCCGCCGAGTGCCTGTTTGGCTACCGTGACA
GTGTATTTAAACACCAGTATCGCGAAGGGTATGCCATTATCGCTGTCGGG
CTGCGCCTGGCAAAAATCTGGCAACCGGTGCTGAGCTATGGCGATCTGCG
TAATCTTGACCCGCTGACGGTTACGCCGCGCGAAGTGTTCAACGCCGTCT
GCCAGATGCGGCGCAGCAAATTACCCGATCCCAAAGTGACGGGTAATGCC
GGGAGTTTCTTCAAAAACCCGCTGGTGAGCGCTGAAGTTGCCGCTAAATT
GCAAGCACAGTATCCCCATATTCCGCTTTATCCTCAGCTCAATGGCGATG
TAAAGTTGGCCGCCGGTTGGCTGATCGATCAGTGTGACTTAAAAGGTTCC
ATATTGGTGGAGCGGCCGTGCATGCCCAGCAGGCGCTGGTGCTGATTAAC
GCCAACGAAGCGACGGGGCAGGACATCGTGAACCTGGCCCGGACCGTACG
TCAGCGCGTGGCAGAGAGATTCAACGTCTGGCTGGAGCCTGAAGTGCGCT
TTATCGCAGCACAAGGCGAAACAGATGCCGTAGAGGTTATTGCATGAAAG
ACAACACCGTACCGTTAACGCTGATTGGTATTCTGGCAGATGGAGAGTTC
CATTCTGGTGAGCAGCTGGGCGAGCAGCTAGGCATGAGCCGCGCAGCAAT
CAATAAGCATATACAAACGCTGAAAGAGTGGGGCATTGATGTCTTCACAG
TGACCGGCAAAGGCTATAGCCTGCCCGCGGCCATGCAGTTATTGAATGAA
CAGGCCATTAATGCCCGGCTGGATAACGGGCGCCTGGCGGTAATCCCAGT
GATTGACTCCACTAACCAGTATCTGCTGGATCGCATGGATACGCTGCAAT
CTGGCGACGCCTGCGTAGCCGAATATCAGCAGGCTGGGCGTGGTCGTCGA
GGTCGTCAGTGGTTTCACCCTTTGGCTCTAACCTCTATCTGTCTATGTAC
TGGCGTCTTGAACAAGGTCCGGCGGCTGCCATGGGGCTGAGCCTGGTCAT
TGGGATTGTGCTGGCGGAAGCATTACAGGAGCAGGGCGCGCCCGATATTC
GTGTGAAATGGCCGAATGATATCTACCTGGACGATCGTAAACTGGCCGGT
ATCCTCGTTGAATTGACGGGGAAAACCGGGGATGCCGCGCAGATCGTGAT
AGGCGCCGGAATAAATCTTGCTATGCGTGCACCCGCTGCCGACGTCATCA
ATCAGGGCTGGATCAACCTGCAGGAAGCCGGAGTCAGCGTAGATCGTAAC
GCGCTCTCTGCGCTGATCGTTAATAAATGCGCACCGCGCTCGTCGAGTTT
GAGCAGGAAGGGCTGGCACCGTTTATTGAGCGCTGGGCGCGGCTTGATAA
CTTTATTAATAGGCCGTAAAACTGTTAATTGGCGATCGGGAAATATTCGG
CATTGCCAGAGGAATTGATCAGCAGGGTGGCTTGATTCTGGAACAGGATG
GCGTCAGAAAGTCCTGGGTTGGCGGGGAAATATCGCTGCGACCGCAGAGT
TAAAAAAAGGGCCTCAGGCCCTTTTTTTTATTTGCGTAATCTGACCAGGT
CAACCGCATGACCGATACTCTTGGTCATTATCAGGCTGGCACGCTCACGC
GTAGGAAGGATGTTTTCCTTCAGATTCAAATAGTTGATCTCTTTCCATAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.