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GrainGenes Sequence Report: AA006111

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Sequence
AA006111
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA006111
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGGCGCCGGCGAGCCGCCGCAGACAGGTTCTCAGCCACAACCGGTGCT
CGCAGTTGGGGTTCGGCCCGGAGAAAGAGAGAGGGAGAGGCCTAGAGAGA
GGGAAATCCCCTCCTCCTCTCAGCCCTAGAGTGCCTCCCACGCACGCCGC
CGCCGTCCCCGTCCCGCTCTACCTCGCCGCGTCCATGCCGTCTCCGCAAC
CTTGGGCATACTGGTTTCTAATCTGGTATGTGTTCGGGGTCATCCCATCC
CGCGGTTTCTTCAAACCCAGAACTAACCTGCACTGGGCATGCCGTCAGGC
TGGATCTGCCGATAGATCACACTAGCGATGTTAGGTTTGAGTTCATTGTC
GGTGTGTTATTCCCCACCCTTGTGTTCACTAGTTACCATTCAAATTTGGG
ATGTCCTGCTCTTTCCTTTTATGAGCAACTCTAGAGATAATGGGAGAGTT
GGCACTGAAAATTGAAAAACCATTTTACAGTATCGGAAGCCTGCAGCTTT
TTCAGATACCGTTAGAACTGCATGCTGTAAAACCTTTTTTCCTCAATTTC
TCATATGAGCATGCATGTAAACTGTGTTTCAACTCTAATTTTGGCATCAA
TATAATTCAAGCTTTTCATGTTTGAAACAGGAGGTGGAGGAAAGGCACCA
GCCACCCACGAGCTCGACCCAACCACGAACGGGCTCAACCGGCGGCGGCG
AGCTCCGGTCGATTCCGGAATCGGAGGTGGCGTGTGAGACCAGCGAGCTC
GAGGAGGAGGCCTTGCGGCGCGAGGCAGCAGAGGCAGGGCACGGAGGCGA
ATCCGAGGCGCTCGAGCCCACGGGCCAAGCTTGCGACGCCGGCCATGGAG
GAAGCTCGTGCGCCACGCCTGGAGCTCGGGCAGGGCAGCGGGGACCTCCA
GCATCGGCGAGAATGGGGCATTGGGGCTTGAGGAATGCTTGCGATAGTGT
GGCGGCGGCTGGAATTGACCGCGGCGAGGCGTCAGGGGCGGCGGTGAGTT
GGGCAGTATGCGAGGACGTTTTTTCAGTATACTGCAAAAAGATTCAGTAT
GAGGGCTTTTAGGTATCTGCTAGACTGTATTTTTTGCCACCTGTACTTAA
AAAAATCATTTTTTTTACTTTATGCCCTATTTTTCAGTGTTTGCTAGAGT
TTATCTTACGAGTTTCTCCATATATGGGGATTCTCGAGTGGGGTAGTATA
CTGAACCGCACAACATTGGGCACTTGCATCTTTCTTTATTAACAGTAAAC
TGGGACCTGGAGAGTTCTTTTTATAACGTTTTTAATGCTTTATCCTTGTA
TATGTCCAAGTTTAGTACTGTTCTTGGCAGTTAATTACATAATTAGAATC
GACTTTTGCGGTGTCCATGTGCTTGTAATTTCATATTACGTGTAAATGTT
GTGAGGAACTAATTAGCCAGGCTCTAGCATTGGTTGTTCTCTTTGGCTCT
TGATATTTTTACCCTCCCATCATAGAACTACTGCGTGAGCTTGTATTGTG
CTTATGATAAAGCTACTACCTATGTAGGTTACTCAGGATGATAAGGCTGT
GCCAGACTATGTTTTTTGTGTTATTGAATCCTTGAAGACAAAAGTTACAG
CAGATCGTTTTACCTACATCAAGGTGCTTTGAAAACCATACATTCTGTAC
TACTCTCAGTGCCTTTTTTACTCACCCCTAGCCTTACTTTTTTCTGATTG
CTATGAGTTTTTTTTTCCAGAAAAGGATAGAGGAAAACAGGAGTAAGCTC
AGCACCGTTACACGAAAGACTAACAATGCTTCAAAGGTCTGGCAAAGAAA
TACATCAAATGGCACTGACTTACTCTCGAATCTGCTGACAAGTAGGCAGG
ATGATGCACTCTCTTCCGTGCATAATCTTGGAGTATTACCTGCTGCGGAA
GATGGCGTCAGTTATGAAGAACAAACTTCGAATGCCACATCAACTGATAT
GTTGGTTGGAAACCTAGTTGCAATCATTAGGCCAATTAAACTGCCAGAAG
TACTAAAACTTCCACGTTATACAACATGGATATTTTTGCACAGGTCTGTT
TATAATCACATCAACTTCTCAATTTCCCCAAACTCCTTCTGCATACAATA
GAGTTTCTTTAGTAATGTTTCATATGGTTTCTTGAAACAAGATTTCTCGG
GGTTTCATGTAGGAACCAGTGGGCGGAAGAACAATCTGGTCGACAAAAGA
TTTACTATGGTCCAAATTGTGGTGAAGCTTTAGTTTCCAGTGATAATGAA
GAGGAAACAAATGAGTTCAAAGATTCTGATGATTATATTATTCGGTAAAC
AAACTCGGTGTTTCCTCTTGCATTAGTATACCTTGTTTAGGCTTAACTTC
TGCAGTTATTTGTGATTAACATCGGCTATGGTTTAAGAAGCACAACTTCT
TGAATTATTACTACTAGTTGAATGCCCGTGCGTTGCCACGGGTATTTAAA
TTTTCATGTCACGCTCTATTTAGTTGTCATGGTGCATTTCATCTTTCAAT
TTGTCAAATATCTCCGATATGGTTCACTTGCTGTTTTTTCCAAATTCACC
CTTTGGTTAAACCGACAACACAAGATGTCATCGTTCTCTGTCTCTTCCCC
TTTGCTATAGTGAAAGAGAGGCAAAAGGGAGGAACTCCACTTCCCCCGCT
CTGTAGCTAGCCAGACCGTCGGTCCCTCCCTCTCCATCATCCACTTCATT
GGTGGGAGAGTAGAGGGACCACAGATCGTGTCTCCTGCGTCTAGGTAGTG
GTAGGGTTAGGGTTCTGGCTGTCATTTTTCGGGTGGTGGTGACAATGACG
GTGAGGAATAATCTACTGCAGCTCCAGCTCCACTTTGACGGCTACGTTAA
GTACCTGGCAGCAGTGTCTTCATGCTTTCTCTTGGAGGAGCGAGATTTGG
TGCGCTAGGTGTGGGTGTCGCGGTTACGATGTCACCCACACAACTTTTTT
CTCCAACTCCGTCGTGGCGACGGCGCATCCTCCGGTGTTGTGGAGTGTGC
GAGACCTTGTACATGAGGTAGTCACAAGGCGCCATTTTTGCCTCCTTTCG
ATGATGTAGGAGTGGGAGGGGAGGACCTTGGCGCTGGTGGTTCTTCAACT
TGATGTTGCTTTCTAGTGTATGGAGATACAAAAGTCAAAAACTTTGTGAC
AACGGAGATCCCATCTGCAGATACAAAGTTCACGACGACTCAGAGTGCGA
GTGGCAGCGACAGCGGTACAGTGGACCTCTACATATACAAAGTTCACGGC
GACTCGAGGTGGGAGTGGCAGCTACAGGGCAGCACGGTGGACCTCGTGTT
GAGTTGTATCCCAGGGACTTGGGAATAGTATTTTATTTGTTAGTGTGGTG
TTGTGTACCACTTGTCCTCCTTAATAGACCTAGGGTCTAAATCGCAAAAA
AACACACGATCTCCAATAAATTACACTGCTTGTAGATGTATAAATTTACT
TTATAAAACACCTTATTTCAATCACAAATCAACCTTACAACAAATTGCCT
TCACAGTAGGGTACATACATTAGAACTCCATGTTGACTTGTTGAGATAAC
AAATCAAGTTGGCACGGCCAAAAGCCTATGTGGTTGAGTGTCAGGGTCTC
AGGGAGGTCAAGGATTCATTTCATTTTCCAAGGAAAAATAGAAAATAAGT
ATAACTATGAGAAAATCAAGTGCCATTCACAACACTGGGAGATCTCCTTC
GGGAATCCAGCTGAGAATATGTTTTTTTAGAAATGAGGTCATCGAACCTA
GCTTTATTACTCCCTCAGATCCATATTAATGTTCTCAGATTTGTCTAGAT
TCGGATGTATCTCTACATACATCCGAATCTAGACAAATACGAGAACATTA
ATTTGGATCGGAGGGAGTAAGGGTGCGGTGTCAACCACCCTCATCGGCAT
TCAGCAGAGGCGACGGTTGTTGTATCGATCTCGTCGCCGCAAACCTTGGT
TGCACACCTGTGGCGTCTGTCCGTAGAGATGATCGCCTCCGACACGACGA
CCACCACAATGATGGTCTTGATCTCATCGTTGCAGGATGTTCTTGTGCAC
CACCCGCTTGCACTCCATTGGCGCTCTGATCCTAGGGCGACGCGCCTCCT
GGAGCTCGACGGAGACCGCGGGAGGACTGTGAGGGCGTGGAAAAGTCGCC
CGAAATCGCGCACCTCCCGCCGGCACTCCATTGGTGCTCTGATTCTGGGC
CAGCCGCGCTTCCTGGAGCTCGACGGAGACCGTGCCTCGTGACAGCGAGG
GCGTGGAGAAGTCGCCTGAAATCGTGTACCTCCCGCCGGCACTCCATTGG
TGTTCCGATCCTGGAGCGGCCGCGTGTCTTGGAGCTCGATAGAGACCGCA
GCCGGGACAACAAGGGCGTGGATCGCGCCTGCTACGCGGGTGAAGCCGAA
CTCCATTGTTGTGGAGACGGTCGACATCCCGATGATGAATGGAAACCGGC
GCCGACGGAAGGAGAGATCCCCTCTGCGGCGGCAGAGGTGGGGAGGAGTG
GGTGGGGTGGAAGATCGGGTGGACCGGGCAGGGTGCCTGATGTTGGGCTT
AGCCATTAGGTGTGTGCGGGGCGAGCGAAGCAACGCACGACAAAGGAACC
GACGTAGTGCGGAACAGCAGAAAATAGAACACCTTTTTAGATAATAGAGA
TAGATAAGGTAAAGTTTGTTAGTCTTGTTAGATAAGGTTTGTTAGTCACT
TTGAAGTTAAAGACTGTCACATTTTATTTTAAAACATTATAATGCAAATA
CAAAATATTGCTTCTGTAGTTATCGTCGCATTCATAGCCTCTCCATTTTC
ATGTAGTAGAGAACTTCAATAGCTACGAATACAACATTTGTGGCTTTTTT
ACGTAAGGTCGCTGCTGCTGTCTAAGTGTTAATTCTTTGCAATGTTCAAC
AGAGATCCATAATCAAACTAGGTTAGCTTGGACCCCCAGGAAAGTAAGCT
TATTTAATTTTACTTCAATCTGGGTGGAGGTTTTGTTTCTACCAATCTAC
CATATTGGTCAAGGAACACAAATATGGAGTTCACGTCATGTAACTCTAAT
CTGAGTAGTCTGTTGATGAGTTTACACCTTCCTTAACCTTGATAGATCAA
AAATAGATTTTGGCTTCTGCTATATAATACTCTCCTCTCACTGAGTATTT
TGGTGTAATAAACTATGTTCCTCCGCAAATCTTATGTTAGGTTGACCATT
GAAGAATGCGGCAGGTCTGATGCAGTGCTGGAAACCCTAGCTCAATATTT
CGGTAGAGCTGCTGGTGATATAAAGGCTAGTTTTCTCTTCATAGTCACTT
TTCTCAATAGCATTTTGGCTTTTCCTTTTCCAGTTCACATTTTCACTATA
TTGACAATTAACACATACAACCCTAATTTACAGGCCAGATATGAGATCCT
ACATGGGGAGAAAACTGAGGGTTCTTTTAAAGAAAAGTCCAAACTTAATG
CCAAAGTGGAAGATGTGTACCGTGATAAAGATTTGAATGCAGCATTGGAT
TCCTTTGACAATCTCTTTTGTCGGCGATGTCTAGTATGTTAATCTATTAA
CCACCATGTGACTTTTGTAATGTCTATGGTTTGCTGATAAATATTCTGCT
CATGTTGACATTGGCAGGTTTTTGATTGCAGACTACACGGCTGTTCTCAA
GATTCAGTATTTCCTGTAAGTTTTGAAGTTATTTCTGAAACTGTGTGCAT
TTTCTAATTAGTGTCTTTCTTTATACAGACAGAAAAGCAATCACCTTGGA
ACAGCATGAACAATGATGGTATACCATGTGGTATTCATTGTTATAAACTG
GTTGGTATTTTTGTGTTCTATGACTTCTGAAAAGTTGCTTGTCTTGTGAG
GCAATTTAGATCATGAAAGATAAGCACATGACTTGCATTGATATTTGCTT
TTGCGAACCATATTTTGACAGCCCTCCAAACTAGATTCTACTACCACAGT
TGATCCTCATATGACTATTGATACCAAGCCAACTCAGTTATCGGATAATA
CAAGGAAGAAGTTAGCCTCAAATAAGAAAAAACAGGGTTCCAGTGGAAAG
AATGCCGAATCTCAACAAAGTGAAGTACATCCAACAAGCAATAAATCTGT
GCAACAAATTATCCCCAAAGGTAGAATCAAGAAAAGGACTAAGCCTGGTG
GATGCCCTTGGCCAAGGAAGCTTAGATCCCGTACACTGAATGGACACAAA
GATTCAGTTGCGTCCTCACAACAGAATTATCCAAACACAACAAGTACTCG
GAAGAAGGATGCACCTCAAATGGAGAAGAATACAACTTCAGTGGAAGATC
ATAATGATACAACAGAGGGAACAGATAATGAACATTCAGCAACATATGGT
CATGATAGTTCGCGGAAAGAAGAATCTGTTGATGGGAATGTATGCACGCA
AGAAGATAATGGTAGATCCTGGAAGGTGATTGAGCAAGGGCTTCTAGTCA
AAGGTTTGGAGATTTTTGGAAGGAACAGGTTGGACCTTTCACCTCATAAT
CTGCTTTTATGTCGGTGGTTTCGTTACCTTGAACTTAATGTTAATGTGTT
GCTTACTATTATACAACCAGTCAGGTGAAAATTTCTGTTAGATTTGCATA
ACCTGTAAACATGTTTCTGAACTGAGTAAAGGTTATGTGGAAAAGGATAT
ACCGGTTTTAAGGTGGAAAGGCGTCTATAAGGTGATCGACCCTGGCCTTC
ACGTCTAAGCATCTCAGCCGGGAAAAATGCTAAGGCGCTGCCGCCTTACT
GCCTAAGCCTCAATAAAGGCGGCGTCTTAAAAACCATGGGGTATACCCCG
CCATACAGAAGACTTTGGCCATGGTTCCTTACTGAGTAAATTTATGCATT
CATGCCTTCTACTTACCTTTTTTCATCATCCTACAAGTGCGGAATGGTAG
TGGGTATTGGAAAATGTTGGAAAAGAAAATCTTTATGCATTTTCTATTAC
TAAACTTTGCATGAACTATGGCATTCAGCTTAGAACCATATACTACAAAA
AAAATCGACTAATGGTTAAATTTCAAATGTTTGACTCCACAAATCCTACT
ACCACTTATATTCTTAGGGCATTGACTTTCCCAGGCGCAAAACTAGTCGT
TTTTCCAGGAAAATTTGCAAGCACATAACACTTGCATGTGTCTACTTTCC
AAATCACCACAGTCTGTTATCATTATTGTAGTCATATTATGAGTCATGAT
ACTGTACCCATGGATTTTTTTATGCAGTTGTTTAATTGCTCGAAACCTTC
TTGGTGGAATGAAAACATGCAGTGATGTTTTTCAGTATATGAATTATACT
GAGAACAACAACGCATCAGTTCTTAGCAGTGTTGATCCGTTTGATAACGG
ATATACAGAGGTAGGGTTCAGTGAACCCCTCTATTTTTATTTTTATTTTC
AACCAGGTAGCATCTTATATTAGTACTGCCGATGTTGATGTCACAGGGAC
AAGAATTGCGCCCCAGATCACGTTTTTTTAGAAGGCGAGGAAAAGCCCGT
CGTTTGAAGCACCCCTCCAAATCTGCAGGCTACCATTTTATGAGGAAAAG
AATTGCAGAAAGGAATGATGAGCTTTATCAGCAATATAATCCATGTGGTT
GTCAATTGGCATGTGGGAAACAGTGTCCATGTCTGAAAAATGAGACATGC
TGTGAGAAATACTGTGGGTGAGTTGATTAGAAAATGCTACTCAGTTCTGA
AGATACTCAGTTCTGCAATAGGTGGATCAACTCGGAATCAAATAAAAAAA
TCAAATACTACTCTTAGGTTCTTGATACTTTGTTGCTTCATTTGAGAGAT
TTCAGTTATGATTGGAATAAGCTATACAAATGCATGAACCCATAGATGAT
AGCACGCAAACAATTTAGTATCCTCATCCTGCTTACATAATTAAAAAATG
GTATTTGTGTGTGGAAGTTTATGCCTTTTGCATTCCAGGTGTCCGAAAAC
ATGCAAGAATCGTTTTCGAGGTTGTCATTGTGCGAAGAGCCAGTGTCGCA
GTCGCCAGTGCCCATGCTTTGCTGCTGACAGGGAATGTGATCCCGATGTG
TGCAGAAACTGCTGGGTAGGGTATGTATTTACAACCGGCAACCTTTTTGT
AGTTACTTTATATTATCTAATAGAGAAAATTGCAACGTTGAGACATGTTA
ATTTCATTCTTCGCACGTCTATGATCTTGCACCTGTGGAAATTCTGCTCA
AATTTGACATAACGATATACTATTTAAATTAATTGGAACAGTATCTTATT
TATGATGGGTATTTACCTGAACTTCTACGTTTGCATTCTGAAAAATCATG
TCAATGATAGAAAATCTTCTTACTTTATATTTAATTTCAATTGGTTTGCA
TTTATACAAAAATTAAAACAGAAAAATTTGGACAGCAAATGCAGTTGCGT
AAAAAAAATGCAGAATGATTGTTCTGTTATCTAACATATGCAAAATTGAA
ATTCAGTTATGATCCTTTTTCACCGCGATCATGCTTAAGAACTCTTTCTA
TTAGCGCCTTGTGAAAGTGGTTTGTACTATAGTCTTTCTAGTATAACGTT
GAACCGTTCGTTTTGTAAACTGCAGGTGTGGTGATGGTTCATGCGGATCT
CCCAAACGAAGAGGTGATAATTATGAATGCCGGAACATGAAAGTGCTTCT
TAACCAACAACAAAGGGTAAAAATTACTACATTTTATGTTTACCACTTGT
TGTGACATCTTGTTTATTATTTCTTGAGTCAATACATGGTTTGGGTTTTT
TTTTTGCGAATGAAGTTTAGGGATTTCTTTAGTTCTACTGTTTACCAAAG
TAAGGACAACGAAAAGAATAACTTCTTTGTGTGCAGAACTGCAGGCACAG
ATGTCCACCATTACCAAGTTGTACTTATAGATAGTTTCACCAGATCATGG
TCTGAATCGGTAGATGCAATTTAGACACAATTTAAGTGTCTAGATTTCTT
TGAGCTACTTTTAGTTACTGTTGAAGCTCGTAACGATATAACAATTGTTA
AAGACCCTTTGGGAACAGATTACTCATGAATGATGGCTTTTCTTTTTAAT
GGGTGGTCCAAGTTATGAACCAGTCAGGATATGAAAACAAACAGAGACAG
TAAAGTTGATTCAAGTCAGGCACTTTCTCAGCAAAACTTTTCTTACCATT
GATTTAAGTTCAGCGGGCCTTAGGGCAGAGTCATTTTTTTCTTTTAAGAT
CAAGAAGAGATGAACTTGGACATTGCCAGCTTTTTTGTTCTAAAAAAGGC
CATTAATTGATATGGAGGCAATGATGTTGCTATTAACTGTTAAGAGATTA
TGAAGTATAAAGGAAAATCCATTTGTATGTTCGCGGTGGACTTAATGATG
TGAGACGACACATCAGGCAGCCAGTAAAACACATGCCTCCCAATAAAATT
TCTGTACTTGTTTAGAGAAATAAAGAAGTCACTTTCTATTAGAATGTCCT
GGTTCTCTTTCAAACAAAATGTTCTGGTGGTGGCATTGAATTAGTCCTGA
TTTTTGTTTCAGATCTTACTTGGGAGATCTGATGTTTGTGGCTGGGGAGC
ATTCCTCAAGGTAAAATTGCTCCTTCCATCCTCTTCATCGTTCTTCCCCT
TTACCTGAGAATACTGTTGGCAAGCATGCATATCTTTTCCACATTCTTCA
GAATACTGTTGGCAAGGATGAATATCTTGGAGAGTACACTGGGGAGCTTA
TCTCCCACAGCGAAGCAGACACGCGTGGAACGATATATGACCGTGAGAAT
TCGACGTTCCTTTTCAACTTAAATAACGAGGTAGGTGCGCCGAAATACCA
GCTAACATGCTGGACTGAACACTACTCGTGCTTTTGCATGAGCTGAGTTA
TTGTCCTTGCCAACTCGCTTTATTCAAAACCTGTATTTCATATTTGATCC
AGACGCTTACTGTTGCTTATGCTGCTCTTTGGATGCAGTTTGTTCTTGAT
GCCTTGAGAATGGGAAACAAGCTGAAGTTTGCCAACCATTCCCCTGATCC
AAATTGCTATGCCAAGGTTATGATGGTAGCAGGCGATCATAGGGTAGGCA
TATTTGCCAAAGAACGGATTGGCGCAGGCGAGGAGATTCTCTATGATTAC
CGCTTCGCGCCCGACGAAACACCAGCATGGGCTCGGAAGCCTGATGCTCC
TGGAGCAGAAGACCCCGGGCAATCTTCCTGCGCGCGAGCAAAGAAGCGTG
CTACTCCTGGGGCGAAAGACCCTGGGCAACGTTCCTGCACGCGAGCAAAG
AAGCCTGATGCTCCTGGAGCCAAAGACCCTGGGCAACCTTCCTGCGGGCG
AGGGAAGAAGCCGGCCCATTGAAGAAAACACCATCGGTTGATTATTTTGC
TCAGGGCCAAAATTCAAGATGTTATTGCCTTTAATTGAACAATGCATTCG
TTGGCCCCTGATTGTTGTATCAGAACCCCATTTTTTTATATCAGAACTTG
TCGATGGAACATAAAACAGCCTTTCGGGACCAATATGGTTGGTTTTGGAG
ATGTGTGGTTTGGCCCTTCTCAAAGTTCTTGTGGGTGTTTGCTGTAACCT
TATGGTCTGATCCTGGCACCACGATGCTCGCTGCGAGCTGACATTGTTGA
GCAACGCCTGTTGTCATGGCTTGCCGAAGCACTGGTTACTGAACATTTGT
GCACTGAAAAAACATCATTTGTTGATTCTTC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.